mRNA_S-firma_F_contig10823.1104.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10823.1104.1
Unique NamemRNA_S-firma_F_contig10823.1104.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: UPI001455C341 (sialate O-acetylesterase-like n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001455C341)

HSP 1 Score: 182 bits (462), Expect = 2.370e-50
Identity = 105/259 (40.54%), Postives = 149/259 (57.53%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSGDES-YACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVK---ENGMGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSM-WEVCDAGTSCAPNTTDSWTPLNS-TLSSPSSLSISVPSTVSTVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPFLA 744
            + +MI P+    IK  IW+QGEAN+GD + Y CLF AMIE+WR +W++GT G+TDP+FPFGF+QL +        +G +P +R  Q +      N  + N FMAV  DL D TSP+G +H R KQ++G RLS AG AVVYG++V  + P  S    D  + TV +  + D+G    +    + +E+C +G +   +   SW P    +  +PSSL +S         S+R+ W D PC FK   VY+    LP APF+A
Sbjct:  268 WNSMIHPMLNFTIKGVIWYQGEANTGDPAPYKCLFHAMIEDWRLKWNEGTDGSTDPQFPFGFMQLSTSNYPYPETVGPYPTLRWHQTYDYGYVPNPVMKNVFMAVGIDLVDETSPYGPIHPRDKQEMGTRLSLAGRAVVYGQNVTSSGPFPSEFTVDPETLTVLI--KYDNGNANIRIVGKIGFEICCSGNAVCQSNDTSWVPAEVISQPTPSSLIVSYYCYKKQAVSIRYLWRDMPCTFKGCPVYSVENNLPGAPFVA 524          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A818SGV2_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A818SGV2_9BILA)

HSP 1 Score: 170 bits (430), Expect = 4.720e-46
Identity = 99/257 (38.52%), Postives = 152/257 (59.14%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSGDESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENG--MGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTVS--TVTSLRFAWSDFPCEFKASQVYAKT-TQLPLAPFL 741
            + AMI P   + I  +IW+QGEAN+G+ +YAC F+ MI+ WR  W++ T G TD +FPFGFVQL +   +   +GGFP++R  Q        N  +P  FMAV+ DL D  +   ++H R K DVG+RLS+AGLAV YG+ VE+  P +  V Y + S TV++ V      ++ +  P+ +EVC  G+ C+ +    W P   T  +  +L++++PS+ S   +  LR+ W + PC FK + +Y+ T   LP  P++
Sbjct:  262 FNAMIYPFTRMVIYGSIWYQGEANAGNPTYACKFEKMIQYWRQTWNQRTQGITDVQFPFGFVQLSTFTNDSSVVGGFPMLRWQQTFNVGYVPNDVVPKVFMAVALDLRDDPN---NIHPRTKHDVGYRLSRAGLAVAYGQAVEFQGPIVKNVVYTAGSQTVNI-VYTGVSNIELRN-PAGFEVCCQGSQCSNDAL--WVPSAVTTRAGLTLTLAIPSSCSGKQLYGLRYLWRETPCLFKEAALYSATDANLPSPPYM 511          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A815UYQ4_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815UYQ4_9BILA)

HSP 1 Score: 163 bits (412), Expect = 2.780e-45
Identity = 97/258 (37.60%), Postives = 147/258 (56.98%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSG--DESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENG--MGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDS-GGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTVST--VTSLRFAWSDFPCEFKASQVYAKT-TQLPLAP 735
            + AMI P   + +  AIW+QGE+N+G     Y C F  MI+ WR  W+  T G T+P FPFGFVQL + +  G  +GGFP++R  Q        N  L N FM V+ DL D  +   ++H R KQDVG+RLS+AGLAV YG+ +E+T P +  V  +S++    +D+   S  G++ +      E+C  G SC  +    W P  ++ +   S+++++PS+ ++  V  LR+ W + PC FK + +Y+ T   LP AP
Sbjct:   63 WNAMIYPFTRMVVTGAIWYQGESNAGYNQNKYVCTFSKMIQAWRATWNSRTQGITNPTFPFGFVQLSTNENTGTVVGGFPLIRWHQTFDYGYVPNDYLANVFMGVAMDLRDDPN---NIHPRTKQDVGYRLSRAGLAVAYGQAIEYTGPIVDKVQVNSAT----IDITYKSVTGIELRSTVGF-EICCEGASCTNDNV--WVPSPASSTGALSIALTIPSSCTSKPVYGLRYLWRETPCPFKLAAIYSSTDANLPAAP 310          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: UPI0015A926BA (sialate O-acetylesterase-like n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A926BA)

HSP 1 Score: 166 bits (421), Expect = 1.370e-44
Identity = 102/255 (40.00%), Postives = 141/255 (55.29%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSGDE--SYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLC-SVKENGMGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYG-KDVEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTVSTVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPF 738
            + AMI PL ++ IK AIW+QGE+N+G     Y+C F  MI++WR  +H G+ G T  +FPFGFVQ+  SVK +    FPI+R  Q+       N  + NTFMAV+ DL D  SP+GS+H R KQDV +RL+    AV YG K V +  P  + V  D  S  V     V         + S++EVC        N++ +W P  +     S + +SV      V+ LR+AW D+PC+FKA  VY+   +LP  PF
Sbjct:  274 WNAMIHPLLSMTIKGAIWYQGESNTGYHLYKYSCSFPTMIDDWREAFHTGSGGQTALDFPFGFVQISTSVKSSKSYAFPILRWQQSARYGYAPNPRMKNTFMAVALDLPDERSPWGSIHPRDKQDVAYRLTLGARAVAYGEKGVAFQGPFPAKVLLDGDSLNVTYTQAVSV-----TNSSSVFEVCCTQEKKPCNSSSTWLPAPTVQWGRSYVQLSVSGCKDVVSGLRYAWRDWPCDFKACPVYSADRELPAPPF 523          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: UPI001C3C756A (LOW QUALITY PROTEIN: sialate O-acetylesterase-like n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=UPI001C3C756A)

HSP 1 Score: 160 bits (406), Expect = 1.770e-44
Identity = 97/256 (37.89%), Postives = 142/256 (55.47%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANS--GDESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENGMG-GFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKD-VEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVP-STVSTVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPF 738
            + AMI PL  + IK AIW+QGEAN+    + Y+C F +MI++WR  +H+ + G T P+FPFGFVQ+ + ++  +  GFP +R  Q        N  + NTFMAV+ DLGD  SPFGS+H   KQDV +RLS    AV YG++ V +  P  S V  +     V  D RV        ++  ++++C +      +T   W P        S++ +S    +++ V  LR+AW D+PC+FKA  VY+    LP  PF
Sbjct:   43 WNAMIHPLLNMTIKGAIWYQGEANTDYNQKKYSCSFPSMIDDWRMAFHQSSGGQTAPDFPFGFVQVSTYRKASLSEGFPNIRWHQTADYGFAPNLRMKNTFMAVAMDLGDEMSPFGSIHPXDKQDVAYRLSLGARAVAYGEEGVSFQGPFPSRVLVNDQYINVTYDQRVSV-----TQSKDIFQICCSVVKVPCDTLSLWVPAPIMQWGLSAIQVSSNYCSLNHVAGLRYAWRDWPCDFKACPVYSADGVLPAPPF 293          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A818S8J8_9BILA (Hypothetical protein n=7 Tax=Rotaria sordida TaxID=392033 RepID=A0A818S8J8_9BILA)

HSP 1 Score: 166 bits (419), Expect = 1.920e-44
Identity = 109/264 (41.29%), Postives = 153/264 (57.95%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSG--DESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENG--MGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEA--PSMWEVCDAGTSCAPNTTDS-WTPLNSTLSSPSSLSISVPSTVSTVTS----LRFAWSDFPCEFKASQVYAKTTQ-LPLAPFL 741
            + AMI P   + +  AIW+QGEAN+G   E YAC F  MI+ WR  W+  T   TDP FPFGFVQL +       +GGFPI+R  Q        N  +P  FMAV+ DL D   P G +H R K DVG+RLS++GLAV Y ++VE+  P +S+V Y S S TV++       G+Q  +   P+ +EVC  G+ C   T DS W P  +T+SS ++L+I++  + S V      LR+ W + PC FK + +Y+ T + LP  P++
Sbjct:  262 FNAMIYPFTRMVVYGAIWYQGEANAGYNTEKYACTFSKMIQSWRQTWNDRTSDLTDPNFPFGFVQLSTWSNTSTQVGGFPIIRWHQTFDVGYVPNNVVPKVFMAVALDLRD--DPNG-IHPRTKHDVGYRLSRSGLAVAYNQEVEYQGPIVSSVSYSSGSTTVNITYT----GVQNIDLRNPNGFEVCCQGSKC---TNDSLWVP--ATVSSKNALTITLIISNSCVGQQLYGLRYLWRETPCPFKQAALYSYTDRNLPSPPYM 513          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A814VX74_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814VX74_ADIRI)

HSP 1 Score: 165 bits (418), Expect = 2.770e-44
Identity = 104/259 (40.15%), Postives = 152/259 (58.69%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSGDESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENG--MGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSIS--VPSTV--STVTSLRFAWSDFPCEFKASQVYAKT-TQLPLAPFL 741
            + AMI P   + I  +IW+QGEAN+G+ +YAC F  MIE WR  W++ T G TD +FPFGFVQL +   +   +GGFP++R  Q        N  +P  FMAV+ DL D   P G +H R K DVG+RLS+AGLAV YG+ VE+  P + +V Y S   TV++     S  ++ +  P+ +EVC  G+ C+ +    W  + S++S  S L+I+  VPS+     +  LR+ W + PC FK + +Y+ T   LP  P++
Sbjct:  266 FNAMIYPFTRMVIYGSIWYQGEANAGNPTYACKFAKMIESWRQIWNQRTNGTTDLQFPFGFVQLSTSTNDSRVIGGFPMLRWQQTFNVGYVPNNVVPKVFMAVALDLRD--DPNG-IHPRTKHDVGYRLSRAGLAVAYGQSVEFQGPIVQSVAYTSGGQTVNIAYTAVSS-IELRN-PAGFEVCCQGSQCSNDAL--W--VQSSVSGKSGLTITLTVPSSCVGKQLYGLRYLWRETPCLFKQAAIYSGTDANLPSPPYI 515          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A820EJU2_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820EJU2_9BILA)

HSP 1 Score: 164 bits (414), Expect = 4.190e-44
Identity = 98/260 (37.69%), Postives = 150/260 (57.69%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSG--DESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKEN--GMGGFPIVRAAQAH-----VNATLPNTFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHTVHVDVRVDSG-GLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTVST--VTSLRFAWSDFPCEFKASQVYAKTT-QLPLAPFL 741
            Y  MI P   + +  A+W+QGE+N+G   + Y C F  MI  WR  W+  T G T+  FPFGFVQL + + +  G+GGFP +R  Q        N  +PN FMAV+ DL D  +   ++H R K DVG+RL+QAGLAV YG+ VE+  P +S V  DS++ T+ +     +G  L+   +P+ +EVC  GT C+ +  + W     +L +  ++++S+P+   +  +  +R+ W + PCEFK + VY+ T   LP  P+L
Sbjct:  210 YNGMIYPFTRMVVAGALWYQGESNAGYNRDKYICTFSKMITYWRQVWNTRTNGITNINFPFGFVQLSTNRNDTIGIGGFPWIRWYQTFGVGYVPNDVVPNVFMAVAMDLRDDLA---NIHPRTKHDVGYRLAQAGLAVAYGQQVEYLGPIVSTVTLDSATSTIDITYSKVTGIDLR---SPNGFEVCCQGTQCSND--NLWVASPVSLKNTLTVTVSIPAACQSKAIYGVRYLWRETPCEFKLAPVYSLTDPNLPSPPYL 461          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: A0A672ITL6_SALFA (SASA domain-containing protein n=8 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672ITL6_SALFA)

HSP 1 Score: 164 bits (415), Expect = 4.430e-44
Identity = 99/258 (38.37%), Postives = 143/258 (55.43%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSG--DESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENGMGG-FPIVRAAQAHVNATLPN-----TFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKD-VEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTV-STVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPFLA 744
            + +MI PL  + I  AIW+QGEAN+G     Y C F AMI++WR  +H+G+ G TDP+FPFGFVQL +  +N     +P +R  Q      +PN     TFMAV+ DL D +SP+G++H R KQDV +RL+    AV Y +  V +  P    +    +S  VH D  +         +  ++E+C + T+C  N+   W P        +S+ IS  S   S+V  LR+AW D+PC+FKA  VY+    LP  PF++
Sbjct:  235 WNSMIHPLLNMTIYGAIWYQGEANTGYHPNKYNCSFPAMIDDWRMAFHQGSCGQTDPDFPFGFVQLSTYTKNSTSEKYPNLRWHQTADTGFVPNSRMKKTFMAVALDLPDESSPYGTIHPRDKQDVAYRLTLGARAVAYNQTGVPFLGPFPKEILRLPNSIVVHYDQAISV-----TSSKDIYEICCSKTACGLNSL--WVPAPILSWDSASVRISTASCKGSSVAGLRYAWKDWPCDFKACPVYSANKVLPAPPFIS 485          
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Match: UPI001176EE8C (sialate O-acetylesterase-like n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176EE8C)

HSP 1 Score: 164 bits (415), Expect = 4.430e-44
Identity = 99/258 (38.37%), Postives = 143/258 (55.43%), Query Frame = 1
Query:    1 YGAMIAPLQTVAIKSAIWFQGEANSG--DESYACLFQAMIEEWRTEWHKGTLGATDPEFPFGFVQLCSVKENGMGG-FPIVRAAQAHVNATLPN-----TFMAVSYDLGDPTSPFGSVHSRHKQDVGHRLSQAGLAVVYGKD-VEWTAPTMSAVCYDSSSHTVHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSSLSISVPSTV-STVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPFLA 744
            + +MI PL  + I  AIW+QGEAN+G     Y C F AMI++WR  +H+G+ G TDP+FPFGFVQL +  +N     +P +R  Q      +PN     TFMAV+ DL D +SP+G++H R KQDV +RL+    AV Y +  V +  P    +    +S  VH D  +         +  ++E+C + T+C  N+   W P        +S+ IS  S   S+V  LR+AW D+PC+FKA  VY+    LP  PF++
Sbjct:  235 WNSMIHPLLNMTIYGAIWYQGEANTGYHPNKYNCSFPAMIDDWRMAFHQGSCGQTDPDFPFGFVQLSTYTKNSTSEKYPNLRWHQTADTGFVPNSRMKKTFMAVALDLPDESSPYGTIHPRDKQDVAYRLTLGARAVAYNQTGVPFLGPFPKEILRLPNSIVVHYDQAISV-----TSSKDIYEICCSKTACGLNSL--WVPAPILSWDSASVRISTASCKGSSVAGLRYAWKDWPCDFKACPVYSANKVLPAPPFIS 485          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10823.1104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001455C3412.370e-5040.54sialate O-acetylesterase-like n=2 Tax=Asterias rub... [more]
A0A818SGV2_9BILA4.720e-4638.52Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
A0A815UYQ4_9BILA2.780e-4537.60Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
UPI0015A926BA1.370e-4440.00sialate O-acetylesterase-like n=2 Tax=Anguilla ang... [more]
UPI001C3C756A1.770e-4437.89LOW QUALITY PROTEIN: sialate O-acetylesterase-like... [more]
A0A818S8J8_9BILA1.920e-4441.29Hypothetical protein n=7 Tax=Rotaria sordida TaxID... [more]
A0A814VX74_ADIRI2.770e-4440.15Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]
A0A820EJU2_9BILA4.190e-4437.69Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A672ITL6_SALFA4.430e-4438.37SASA domain-containing protein n=8 Tax=Salarias fa... [more]
UPI001176EE8C4.430e-4438.37sialate O-acetylesterase-like n=1 Tax=Salarias fas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10823contigS-firma_F_contig10823:4083..4891 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog8081.XP_008424212.1
Preferred nameSIAE
PFAMsSASA
Max annot lvl33208|Metazoa
KEGG koko:K05970
GOsGO:0000323,GO:0001681,GO:0002682,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005975,GO:0008126,GO:0008150,GO:0008152,GO:0016787,GO:0016788,GO:0034338,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0052689,GO:0065007,GO:0071704
Evalue1.33e-45
EggNOG OGs28N1F@1|root,2QUKD@2759|Eukaryota,39HWJ@33154|Opisthokonta,3BG1K@33208|Metazoa,3CREW@33213|Bilateria,481E6@7711|Chordata,48YTA@7742|Vertebrata,49V8G@7898|Actinopterygii
EC3.1.1.53
DescriptionSialic acid acetylesterase
COG categoryS
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size762
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10823.1104.1prot_S-firma_F_contig10823.1104.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10823 4083..4882 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815625.4602737-CDS-S-firma_F_contig10823:4082..47091622815625.4602737-CDS-S-firma_F_contig10823:4082..4709Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10823 4083..4709 -
1696949462.307919-CDS-S-firma_F_contig10823:4082..47091696949462.307919-CDS-S-firma_F_contig10823:4082..4709Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10823 4083..4709 -
1622815625.4764638-CDS-S-firma_F_contig10823:4756..48821622815625.4764638-CDS-S-firma_F_contig10823:4756..4882Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10823 4757..4882 -
1696949462.3262737-CDS-S-firma_F_contig10823:4756..48821696949462.3262737-CDS-S-firma_F_contig10823:4756..4882Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10823 4757..4882 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815625.4874525-UTR-S-firma_F_contig10823:4882..48911622815625.4874525-UTR-S-firma_F_contig10823:4882..4891Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10823 4883..4891 -
1696949462.3352392-UTR-S-firma_F_contig10823:4882..48911696949462.3352392-UTR-S-firma_F_contig10823:4882..4891Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10823 4883..4891 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10823.1104.1

>prot_S-firma_F_contig10823.1104.1 ID=prot_S-firma_F_contig10823.1104.1|Name=mRNA_S-firma_F_contig10823.1104.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=251bp
MIAPLQTVAIKSAIWFQGEANSGDESYACLFQAMIEEWRTEWHKGTLGAT
DPEFPFGFVQLCSVKENGMGGFPIVRAAQAHVNATLPNTFMAVSYDLGDP
TSPFGSVHSRHKQDVGHRLSQAGLAVVYGKDVEWTAPTMSAVCYDSSSHT
VHVDVRVDSGGLQWQEAPSMWEVCDAGTSCAPNTTDSWTPLNSTLSSPSS
LSISVPSTVSTVTSLRFAWSDFPCEFKASQVYAKTTQLPLAPFLAPVSAC
*
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mRNA from alignment at S-firma_F_contig10823:4083..4891-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10823.1104.1 ID=mRNA_S-firma_F_contig10823.1104.1|Name=mRNA_S-firma_F_contig10823.1104.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=809bp|location=Sequence derived from alignment at S-firma_F_contig10823:4083..4891- (Sphaerotrichia firma ET2_F female)
TACGGTGCCATGATTGCCCCCCTGCAAACGGTGGCCATCAAGTCCGCGAT TTGGTTCCAGGGTGAAGCCAACAGCGGCGACGAGAGCTACGCGTGCTTGT TCCAAGCCATGATTGAAGAGTGGCGCACGGAATGGGTGTGTGCCCCCCGT TGTCATCCAGCACTCCATCACCCCTCTTTCAGCACAAGGGCACCCTGGGC GCCACCGACCCGGAGTTCCCCTTTGGGTTTGTCCAGCTGTGCTCCGTGAA GGAAAACGGCATGGGCGGCTTCCCCATCGTCCGCGCTGCCCAAGCCCACG TCAACGCCACCCTCCCTAACACCTTCATGGCGGTGTCGTACGACCTTGGG GACCCGACGTCGCCGTTTGGCAGCGTCCACAGCCGCCACAAGCAGGACGT GGGGCACCGACTGTCGCAGGCGGGCCTGGCGGTGGTGTACGGCAAGGACG TGGAGTGGACGGCGCCCACCATGTCCGCCGTGTGCTACGACTCCTCCTCG CACACCGTGCACGTGGACGTCCGCGTGGACAGCGGCGGCCTGCAGTGGCA GGAGGCGCCCTCCATGTGGGAGGTGTGCGACGCCGGCACCAGCTGCGCGC CCAACACCACGGACTCGTGGACGCCCCTCAACTCCACCCTGTCCTCCCCC TCCTCCCTCTCCATCTCCGTGCCGTCGACAGTGAGCACCGTGACCAGCCT CCGGTTTGCGTGGTCGGACTTCCCTTGCGAGTTTAAGGCGTCTCAGGTGT ACGCCAAGACGACGCAGCTTCCCCTGGCGCCCTTCCTCGCCCCCGTGTCC GCTTGCTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10823:4083..4891-

>mRNA_S-firma_F_contig10823.1104.1 ID=mRNA_S-firma_F_contig10823.1104.1|Name=mRNA_S-firma_F_contig10823.1104.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1506bp|location=Sequence derived from alignment at S-firma_F_contig10823:4083..4891- (Sphaerotrichia firma ET2_F female)
ATGATTGCCCCCCTGCAAACGGTGGCCATCAAGTCCGCGATTTGGTTCCA
GGGTGAAGCCAACAGCGGCGACGAGAGCTACGCGTGCTTGTTCCAAGCCA
TGATTGAAGAGTGGCGCACGGAATGGATGATTGCCCCCCTGCAAACGGTG
GCCATCAAGTCCGCGATTTGGTTCCAGGGTGAAGCCAACAGCGGCGACGA
GAGCTACGCGTGCTTGTTCCAAGCCATGATTGAAGAGTGGCGCACGGAAT
GGCACAAGGGCACCCTGGGCGCCACCGACCCGGAGTTCCCCTTTGGGTTT
GTCCAGCTGTGCTCCGTGAAGGAAAACGGCATGGGCGGCTTCCCCATCGT
CCGCGCTGCCCAAGCCCACGTCAACGCCACCCTCCCTAACACCTTCATGG
CGGTGTCGTACGACCTTGGGGACCCGACGTCGCCGTTTGGCAGCGTCCAC
AGCCGCCACAAGCAGGACGTGGGGCACCGACTGTCGCAGGCGGGCCTGGC
GGTGGTGTACGGCAAGGACGTGGAGTGGACGGCGCCCACCATGTCCGCCG
TGTGCTACGACTCCTCCTCGCACACCGTGCACGTGGACGTCCGCGTGGAC
AGCGGCGGCCTGCAGTGGCAGGAGGCGCCCTCCATGTGGGAGGTGTGCGA
CGCCGGCACCAGCTGCGCGCCCAACACCACGGACTCGTGGACGCCCCTCA
ACTCCACCCTGTCCTCCCCCTCCTCCCTCTCCATCTCCGTGCCGTCGACA
GTGAGCACCGTGACCAGCCTCCGGTTTGCGTGGTCGGACTTCCCTTGCGA
GTTTAAGGCGTCTCAGGTGTACGCCAAGACGACGCAGCTTCCCCTGGCGC
CCTTCCTCGCCCCCGTGTCCGCTTGCTGACACAAGGGCACCCTGGGCGCC
ACCGACCCGGAGTTCCCCTTTGGGTTTGTCCAGCTGTGCTCCGTGAAGGA
AAACGGCATGGGCGGCTTCCCCATCGTCCGCGCTGCCCAAGCCCACGTCA
ACGCCACCCTCCCTAACACCTTCATGGCGGTGTCGTACGACCTTGGGGAC
CCGACGTCGCCGTTTGGCAGCGTCCACAGCCGCCACAAGCAGGACGTGGG
GCACCGACTGTCGCAGGCGGGCCTGGCGGTGGTGTACGGCAAGGACGTGG
AGTGGACGGCGCCCACCATGTCCGCCGTGTGCTACGACTCCTCCTCGCAC
ACCGTGCACGTGGACGTCCGCGTGGACAGCGGCGGCCTGCAGTGGCAGGA
GGCGCCCTCCATGTGGGAGGTGTGCGACGCCGGCACCAGCTGCGCGCCCA
ACACCACGGACTCGTGGACGCCCCTCAACTCCACCCTGTCCTCCCCCTCC
TCCCTCTCCATCTCCGTGCCGTCGACAGTGAGCACCGTGACCAGCCTCCG
GTTTGCGTGGTCGGACTTCCCTTGCGAGTTTAAGGCGTCTCAGGTGTACG
CCAAGACGACGCAGCTTCCCCTGGCGCCCTTCCTCGCCCCCGTGTCCGCT
TGCTGA
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