mRNA_S-firma_F_contig10817.1095.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: F2UJC5_SALR5 (RbsD or FucU transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJC5_SALR5) HSP 1 Score: 157 bits (398), Expect = 8.900e-47 Identity = 82/143 (57.34%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
MT+LKG+P IL P+L+ LA+MGHGD LVLAD NFPA SV ++T +IR D L +P LL AIL L+PLD PCALM +MPEH AG TP+W +Y+AI ++E V F VERF FYE A+K + VVATGE+ALY N+
Sbjct: 1 MTVLKGIPSILPPELLLALAKMGHGDELVLADANFPAESVGASTPCSVIRCDALGMPELLSAILKLLPLDET-SCPCALMDLMPEHKAAGWQTPIWEQYRAIVAENEKRTVDFELVERFAFYERAKKAFVVVATGEQALYANL 142
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: A0A8B7XKT5_ACAPL (fucose mutarotase-like isoform X1 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XKT5_ACAPL) HSP 1 Score: 157 bits (396), Expect = 1.630e-46 Identity = 80/143 (55.94%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M +LKG+PRILSP+L+HVLA+MGHGD +VLAD NFP++S+ IRADG IP LL+AIL L+PLD+ V SP +M+++ EH +A + T VW ++QA+ D E VK ++ERF FYE A+K +AVVATGE+ALYGN+
Sbjct: 1 MVVLKGIPRILSPELLHVLAQMGHGDEIVLADANFPSSSICGAGPKE-IRADGHGIPELLEAILQLLPLDAFVPSPAMVMELVDEHKKAKLPTLVWDKFQALLDAAEGKTVKIEQIERFAFYERAKKAFAVVATGEKALYGNL 142
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: A0A210PPC3_MIZYE (Fucose mutarotase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PPC3_MIZYE) HSP 1 Score: 153 bits (387), Expect = 3.360e-45 Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 10 LKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVA-STTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
LK +P +LSP L+HVLA MGHGD LVLAD NFP ASV S ++ +RADG+ IP L+DAIL L+PLD+ V+ P ALM ++P + G+ TPVW +Y IA KHE + VERF FYE A+K +AVV TGE ALYGN+
Sbjct: 3 LKLIPNVLSPNLLHVLASMGHGDELVLADANFPTASVCKSGPIE--VRADGIDIPTLMDAILQLLPLDTYVDRPIALMDLVPSDKQRGLQTPVWEKYMTIARKHEGKTIDVQLVERFAFYERAKKAFAVVHTGETALYGNI 141
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: UPI0014581009 (fucose mutarotase-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581009) HSP 1 Score: 153 bits (386), Expect = 4.770e-45 Identity = 79/141 (56.03%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 10 LKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVA-STTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
LK +P +LSP L+HVLA MGHGD +VLAD NFP++SV+ S ++ +RADG+ IP L+DAIL L PLD+ V+ P ALM ++P + G+ TPVW +Y+AI+ KHE V VERF FYE A+K +AVV TGE ALYGN+
Sbjct: 3 LKRIPNVLSPNLLHVLASMGHGDEIVLADANFPSSSVSKSGPIE--VRADGIDIPTLMDAILQLFPLDAYVDRPIALMDLVPSDKQRGLQTPVWEKYKAISYKHEGKQVDVQLVERFAFYERAKKAFAVVHTGETALYGNI 141
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: UPI0014551623 (fucose mutarotase-like isoform X1 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551623) HSP 1 Score: 152 bits (384), Expect = 1.090e-44 Identity = 78/143 (54.55%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M +LKG+P ILSP+L++ LA+MGHGD +VLAD NFP++SV + IRADG IP LL+AIL L+PLD+ VESP +M+++ +H E + TPVW +YQ + D E V ++ERF FYE A+K +AVVATGE+ALYGN+
Sbjct: 1 MVVLKGIPVILSPELLYALAQMGHGDEIVLADANFPSSSVCAAGPRE-IRADGHGIPELLEAILQLLPLDAFVESPAMVMELVEKHKEEKLPTPVWDKYQCLLDASEEQKVSIEKIERFAFYERAKKAFAVVATGEKALYGNL 142
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: UPI00021A4559 (fucose mutarotase-like isoform X2 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00021A4559) HSP 1 Score: 152 bits (383), Expect = 1.540e-44 Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M ILKG+PRI++P L+ VLARMGHGD +VLAD NFP+AS+ + LIRADG IP LL AI SL+PLD+ V P LM+++ +AG+ TP+W +Y++I + E + F +ERF FYE A+ +AVVATGEEALYGNV
Sbjct: 1 MVILKGIPRIINPSLLSVLARMGHGDEIVLADANFPSASICRHGPE-LIRADGHAIPPLLKAITSLLPLDTYVPRPAMLMELVHNDKKAGLKTPIWEQYKSILQQAEGKDIGFEMIERFAFYERAKTAFAVVATGEEALYGNV 142
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: FUCM_HUMAN (Fucose mutarotase n=48 Tax=Simiiformes TaxID=314293 RepID=FUCM_HUMAN) HSP 1 Score: 151 bits (382), Expect = 2.250e-44 Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVK-FHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M LKGVP +LSP+L++ LARMGHGD +VLAD+NFPA+S+ IRADGL IP LL+A+L L+PLD+ VESP A+M+++P E G+ TPVW EY++I + A V+ ++ERF+FYE A+K +AVVATGE ALYGN+
Sbjct: 1 MVALKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPME-IRADGLGIPQLLEAVLKLLPLDTYVESPAAVMELVPSDKERGLQTPVWTEYESILRR--AGCVRALAKIERFEFYERAKKAFAVVATGETALYGNL 141
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: C3Y6F6_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3Y6F6_BRAFL) HSP 1 Score: 151 bits (381), Expect = 2.910e-44 Identity = 80/143 (55.94%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M +LKG+PRILSP+L+ VLARMGHGD +V AD NFP +S+ S+ +RADG IPALL A+L L+PLD+ VESP A+M ++P E G+ TPVW Y+ + K S +VERF FYE A+K +AVVATGE ALYGN+
Sbjct: 1 MVVLKGIPRILSPELLFVLARMGHGDEIVFADANFPTSSICSSGPIE-VRADGHCIPALLKAVLELLPLDTYVESPAAVMDLVPGDKEKGLKTPVWDTYRGLL-KEAGSTTPLEQVERFAFYERAKKAFAVVATGETALYGNI 141
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: UPI0018A7ADBF (fucose mutarotase-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A7ADBF) HSP 1 Score: 151 bits (381), Expect = 2.910e-44 Identity = 77/141 (54.61%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 10 LKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVAS-TTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
LKG+P ILSP ++H+LA GHGD +VLADINFP ++ + + RADG+ IPALLDAIL+LMPLD+ VE+P LM + G PVW EY+ I DKHE++PV F +VERF+FYE A+K YA++ TGE A Y N+
Sbjct: 4 LKGIPHILSPDILHLLAVTGHGDEIVLADINFPTHTICNGSDRPKEYRADGVGIPALLDAILTLMPLDAYVENPVQLMDLTDGDKTKGFQVPVWDEYRKICDKHESAPVSFEKVERFEFYERAKKVYAIIHTGETAAYANI 144
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Match: UPI0018D5E3BD (fucose mutarotase-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5E3BD) HSP 1 Score: 151 bits (381), Expect = 3.100e-44 Identity = 78/143 (54.55%), Postives = 101/143 (70.63%), Query Frame = 1
Query: 1 MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRADGLTIPALLDAILSLMPLDSAVESPCALMQVMPEHVEAGITTPVWAEYQAIADKHEASPVKFHEVERFQFYEEARKCYAVVATGEEALYGNV 429
M +LKG+PRILSP+L+ LA+MGHGD +VLAD NFP++ V IRADG IP LL+A+L L PLD+ V +P LM ++PEH + + TPVW +YQ + D E V ++ERF FYE A+K +AVVATGEEALYGN+
Sbjct: 1 MVVLKGIPRILSPELLLALAQMGHGDEIVLADANFPSSGVCRAGPRE-IRADGHGIPELLEAVLQLFPLDAFVPAPAMLMDLVPEHKKEKLPTPVWDKYQTLLDAAEGKHVNIEKIERFAFYERAKKAFAVVATGEEALYGNL 142 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10817.1095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10817.1095.1 >prot_S-firma_F_contig10817.1095.1 ID=prot_S-firma_F_contig10817.1095.1|Name=mRNA_S-firma_F_contig10817.1095.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=143bp MTILKGVPRILSPQLIHVLARMGHGDRLVLADINFPAASVASTTVDGLIRback to top mRNA from alignment at S-firma_F_contig10817:4368..4854+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10817.1095.1 ID=mRNA_S-firma_F_contig10817.1095.1|Name=mRNA_S-firma_F_contig10817.1095.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=487bp|location=Sequence derived from alignment at S-firma_F_contig10817:4368..4854+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10817:4368..4854+ >mRNA_S-firma_F_contig10817.1095.1 ID=mRNA_S-firma_F_contig10817.1095.1|Name=mRNA_S-firma_F_contig10817.1095.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=858bp|location=Sequence derived from alignment at S-firma_F_contig10817:4368..4854+ (Sphaerotrichia firma ET2_F female)back to top |