mRNA_S-firma_F_contig10808.1085.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: UPI001F403F1A (methyltransferase domain-containing protein n=1 Tax=unclassified Microbacterium TaxID=2609290 RepID=UPI001F403F1A) HSP 1 Score: 63.5 bits (153), Expect = 5.230e-9 Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 25 GSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEGVSGTPIEGVENAY 381
G+V+D A G+G L AL ++LPG VG D+SP M+AVARE V+AD + ++S V T ALH + A+ AI EW R L PGG AT+ S P+ + A+
Sbjct: 85 GTVLDVATGTGLVLRALRSRLPGARMVGADISPGMLAVAREAFPGAE-FVEADAAALPLPDASVDLVTCVT-ALHLIP--DARGAIDEWLRVLSPGGRAVTATFMAESRRPVRAEDQAF 199
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: UPI001BA6C098 (class I SAM-dependent methyltransferase n=1 Tax=Paenarthrobacter sp. GOM3 TaxID=2782567 RepID=UPI001BA6C098) HSP 1 Score: 59.7 bits (143), Expect = 8.550e-8 Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 1
Query: 22 EGSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEGVSGTPI-EGVENAYLWSAADVTSWIEAAGLRVDHQRQAMEAEFEMNTLYVLATKT 504
+G V+D G G L A+ G G D+ PE IA AR+ + + S A +L ++L H S D A +AE++RCL PGG L L +EG + V AY W A++ +E AG V + E + ++AT+T
Sbjct: 43 DGKVIDAGCGPGQWTSFLHAQ--GFEAEGVDIVPEFIASARQH--HPNTAFRVGSLEQLQVPDQSLAGILAWYSLIHTSPDDIAAVLAEFSRCLAPGGSLLLGFFEGEAVEEFAHAVTPAYFWPVAEMGKCLERAGFLVTSSNSRKDPETRPHAA-IIATRT 199
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A0A852RH42_9MICO (SAM-dependent methyltransferase n=1 Tax=Leucobacter aridicollis TaxID=283878 RepID=A0A852RH42_9MICO) HSP 1 Score: 57.4 bits (137), Expect = 6.510e-7 Identity = 47/141 (33.33%), Postives = 61/141 (43.26%), Query Frame = 1
Query: 16 PAEGSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEGVSGTPI-EGVENAYLWSAADVTSWIEAAGLRV 435
P G V+D G GH L G VG D+ PE IA ARER + D + A +L ++L H +AE+ARCL PGG L + + G V AYLW A ++ +E AG RV
Sbjct: 55 PLAGPVLDAGCGPGHWTAYLHGI--GTQVVGLDMVPEFIASARERFPRVS--FRVGTLDSLPYAQGALAGILAWYSLIHTPPARVPQVLAEFARCLEPGGSLLVGCFAGPQVRAFGHAVTTAYLWPPAQLSRALEGAGFRV 191
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: UPI0006A7EC77 (class I SAM-dependent methyltransferase n=1 Tax=Leucobacter celer TaxID=668625 RepID=UPI0006A7EC77) HSP 1 Score: 55.8 bits (133), Expect = 1.990e-6 Identity = 43/142 (30.28%), Postives = 64/142 (45.07%), Query Frame = 1
Query: 25 GSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEGVSGTPIE-GVENAYLWSAADVTSWIEAAGLRVDHQR 447
G ++D G G + L + G G D + IA A R A + + G S +L F+L H+ +T +AE+ARC+ PGG L + ++G +G P + V AY WSA + +E AG V R
Sbjct: 44 GRIIDVGCGPGQWTDFL--RREGIDIEGVDPTAAFIADAARRYPR--ARYRVGRAERLGVRDESLGGVLAWFSLIHMPPETIDEPLAEFARCIAPGGGLLIGFFDGSAGEPFDHAVTTAYTWSAEALAERLEHAGFTVTEAR 181
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A0A229HP52_9MICC (Class I SAM-dependent methyltransferase n=2 Tax=Micrococcus sp. KBS0714 TaxID=1179670 RepID=A0A229HP52_9MICC) HSP 1 Score: 55.1 bits (131), Expect = 2.490e-6 Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 1
Query: 25 GSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXX--AVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLY---LATWEGVS 348
G V++ AGSG ALL + PG D+ M+A AR R V QAD T + ESS V+L+ LHHV KAA+AE AR L PGG+L L W S
Sbjct: 58 GDVLELGAGSGQMAAALLQRSPGMRLTLTDIDERMVATARRRFPTSPRLTVQQADSTALPFAESSFD-VVLSFLMLHHVV--NWKAAVAEAARVLKPGGMLIGYDLTAWSSPS 167
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A0A5E4U2P3_9BURK (Trans-aconitate 2-methyltransferase n=1 Tax=Pandoraea terrae TaxID=1537710 RepID=A0A5E4U2P3_9BURK) HSP 1 Score: 56.2 bits (134), Expect = 2.520e-6 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 16 PAEGSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLAT 333
PA ++D G+G L L K PG VG D+SP MIA AR RL ++ MT E++S ++++ ALH S D +A + + AR L PGGVL +AT
Sbjct: 36 PAPMRILDACCGTGSLLATLGDKAPGAHRVGIDVSPHMIAEARNRLYGEDCDLRVGDI-MTHDEAASYDLVISNAALHWFS-DNVEATVKQLARLLVPGGVLAVAT 139
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: UPI001F3D168E (class I SAM-dependent methyltransferase n=1 Tax=Paenarthrobacter sp. AR 02 TaxID=2899821 RepID=UPI001F3D168E) HSP 1 Score: 53.9 bits (128), Expect = 1.090e-5 Identity = 46/143 (32.17%), Postives = 63/143 (44.06%), Query Frame = 1
Query: 22 EGSVVDTAAGSG---HHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEG--VSGTPIEGVENAYLWSAADVTSWIEAAGLRV 435
+G V+D G G H L AL G D+ PE I AR+ + + S A +L ++L H S D +AE+ARCL PGG L +A +EG V P V AY W A++ ++ AG V
Sbjct: 43 DGKVIDAGCGPGQWTHFLHALRVDAEGV-----DIVPEFIESARQHYPN--TAFRVGSLEQLQVPDQSLAGILAWYSLIHTSPDDIPTVLAEFARCLAPGGSLLMAFFEGETVEEFP-HAVMPAYFWPVAEMGKCLDRAGFLV 177
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A0A132H812_MICLU (Putative S-adenosylmethionine-dependent methyltransferase n=5 Tax=Micrococcaceae TaxID=1268 RepID=A0A132H812_MICLU) HSP 1 Score: 53.1 bits (126), Expect = 1.800e-5 Identity = 42/101 (41.58%), Postives = 52/101 (51.49%), Query Frame = 1
Query: 25 GSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXX--AVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVL 321
G V++ AGSG ALL + PG D+ M+A R R V QAD T + ESS V+L+ LHHV KAA+AE AR L PGG+L
Sbjct: 37 GDVLELGAGSGEMAAALLQRSPGMHLTLTDIDERMVATTRRRFPTSPRPTVQQADSTALPFAESSFD-VVLSFLMLHHVV--NWKAAVAEAARVLKPGGML 134
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A0A2S0KG79_9ACTN (SAM-dependent methyltransferase n=1 Tax=Gordonia iterans TaxID=1004901 RepID=A0A2S0KG79_9ACTN) HSP 1 Score: 52.8 bits (125), Expect = 2.170e-5 Identity = 47/146 (32.19%), Postives = 64/146 (43.84%), Query Frame = 1
Query: 25 GSVVDTAAGSGH---HLEALLAKLPGRVFVGRDLSPEMIAVAR---ERLXXXXAVVQADMTDMTGTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEGVSGTPIE-GVENAYLWSAADVTSWIEAAGLRVDH 441
G V+D G G HL L G G D +PE IA+AR A + G E S +L+ ++L H+ A+AE+ARCL PGG L L + G + + V AY W + ++AAGL V H
Sbjct: 21 GPVLDVGCGPGQWTAHLAGL-----GFDVNGIDPTPEFIAIARASDSAAPDCTARYRLGSAHDLGVEDGSLGGILSWYSLIHLEPGLISTALAEFARCLRPGGGLALGFFTGETVASFDHAVATAYRWPVDLLVEAVDAAGLTVTH 161
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Match: A3QFI8_SHELP (Methyltransferase type 11 n=8 Tax=Shewanella TaxID=22 RepID=A3QFI8_SHELP) HSP 1 Score: 53.1 bits (126), Expect = 2.340e-5 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 22 EGSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERLXXXXAVVQADMTDMT--GTESSSCAVLLNTFALHHVSADTAKAAIAEWARCLGPGGVLYLATWEG 342
+ V++ A G G+ LLA+ P ++G DL+P+M+++ARE Q ++ D G+ + ++ F L ++S D AK I AR L GG+LYL+T EG
Sbjct: 55 QDKVLELACGPGNIARYLLARRPQLDYLGTDLAPQMVSLAREN----NPTAQFEVMDCLAIGSLTEMFDAIVCGFCLPYLSRDEAKVLILAMARRLNAGGLLYLSTMEG 159 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10808.1085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10808.1085.1 >prot_S-firma_F_contig10808.1085.1 ID=prot_S-firma_F_contig10808.1085.1|Name=mRNA_S-firma_F_contig10808.1085.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=172bp LVGLAPAEGSVVDTAAGSGHHLEALLAKLPGRVFVGRDLSPEMIAVARERback to top mRNA from alignment at S-firma_F_contig10808:2024..2539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10808.1085.1 ID=mRNA_S-firma_F_contig10808.1085.1|Name=mRNA_S-firma_F_contig10808.1085.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=516bp|location=Sequence derived from alignment at S-firma_F_contig10808:2024..2539- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10808:2024..2539- >mRNA_S-firma_F_contig10808.1085.1 ID=mRNA_S-firma_F_contig10808.1085.1|Name=mRNA_S-firma_F_contig10808.1085.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1032bp|location=Sequence derived from alignment at S-firma_F_contig10808:2024..2539- (Sphaerotrichia firma ET2_F female)back to top |