mRNA_S-firma_F_contig10801.1079.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: A0A7S2G723_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G723_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.490e-66 Identity = 103/210 (49.05%), Postives = 152/210 (72.38%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCE---ANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPPPTTKKS--QSDCC 624
+K+ LKV+++GDS +GKT+L+ +Y+ KRFT YKATIGADFL ++V + D +VT+Q+WDTAGQER+QSL +YRGADAC+LV+D TNP SF++L+ WR+EFL Q P+DP++FPF+V+GNK D E++ V A+ WC+ AN +T Y++TSA++ V AF+E A++A ++ P T+ L+ PPP++ +S +S CC
Sbjct: 18 KKVLLKVIILGDSGVGKTSLMNQYVNKRFTQQYKATIGADFLTKEVMIDDKLVTIQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKSFDRLSVWRSEFLSQASPSDPESFPFVVLGNKVDRENERRVQKSRAQAWCKDMCANPLT--YYETSAKEAHQVDAAFQEAAMLALSLENNEADYI--PDTITLSQPPPSSGRSSVKSSCC 223
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: F0VQS8_NEOCL (Ras-related protein Rab-7a n=2 Tax=Sarcocystidae TaxID=5809 RepID=F0VQS8_NEOCL) HSP 1 Score: 211 bits (537), Expect = 4.670e-66 Identity = 106/210 (50.48%), Postives = 139/210 (66.19%), Query Frame = 1
Query: 1 PPSRKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPP--PTTKKSQSDCC 624
PP +K LKV+++GDS +GKT+L+ +Y+ K+F+ YKATIGADFL +DV + D VT+Q+WDTAGQER+QSL +YRGAD CVLVFD TNP SFE L W+ EFL+Q PADPD+FPF+VVGNK D K V S A +C + YF+TSA+ NV AF E+A A + + E+ ++ P T+ L+ P P S CC
Sbjct: 2 PPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADPDSFPFVVVGNKVDEREKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQEKQQEQ-IYLPETLTLSNPDIRPAPIDSSGGCC 210
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: A0A0G4GVC2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GVC2_VITBC) HSP 1 Score: 209 bits (532), Expect = 2.430e-65 Identity = 103/208 (49.52%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERF---VHSPTTVALTAPPPTTKKSQSDCC 624
+++ LKV+++GDS +GKT+L+ +Y+ K+FT YKATIGADFL ++V + D +VT+Q+WDTAGQER+QSL +YRGAD CVLVFD TNP SFE L WR EFL+Q P DPD FPF+V+GNK D E + V A WC+ + +F+TSA+ NV +AF E+A RRA + E ++ P T+ L A PT ++ CC
Sbjct: 5 KRVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNPKSFENLDSWREEFLVQACPRDPDNFPFVVLGNKLDAEGQRKVSHARASTWCKTK-CSIPFFETSAKTAENVEDAFTEIA----RRALKQEHTDDQIYLPETLTLNANQPTVQQPTGGCC 207
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: C4WVZ2_ACYPI (ACYPI002607 protein n=9 Tax=Aphididae TaxID=27482 RepID=C4WVZ2_ACYPI) HSP 1 Score: 209 bits (532), Expect = 2.590e-65 Identity = 101/205 (49.27%), Postives = 144/205 (70.24%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPPPTTKKSQSDCC 624
+K+ LKV+++GDS +GKT+L+ +Y+ K+FT YKATIGADFL ++V + D +VTMQ+WDTAGQER+QSL +YRGAD CVLVFD T+P SF+ L WR EFL+Q P+DPD FPF+V+GNK DL+++ V + A++WC++ N YF+TSA++ VNV +AF+ +A A + + E + P + L + S SD C
Sbjct: 5 KKVLLKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQASPSDPDHFPFVVLGNKVDLDNR-AVSTKRAQQWCQSKN-GLPYFETSAKEAVNVEQAFKTIARNALAQESDVELYNEFPDQIKLDGGSTDNRSSGSDNC 207
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: A0A7M7LKD3_APIME (ras-related protein Rab-7a n=4 Tax=Hymenoptera TaxID=7399 RepID=A0A7M7LKD3_APIME) HSP 1 Score: 209 bits (531), Expect = 3.450e-65 Identity = 100/205 (48.78%), Postives = 142/205 (69.27%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPPPTTKKSQSDCC 624
+K+ LKV+++GDS +GKT+L+ +Y+ K+F+ YKATIGADFL ++V + D +VTMQ+WDTAGQER+QSL +YRGAD CVLVFD + P+SF+ L WR EFL+Q P DPD FPF+V+GNK DLE+K V+ A++WC++ N YF+TSA++ +NV +AF+ +A A + + E + P + LT K S C
Sbjct: 5 KKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPFVVLGNKVDLETK-VIHGKKAQQWCQSKN-NIPYFETSAKEAINVEQAFQTIAKNALAQESEVELYNEFPDQIKLTNDQRNNGKGDSCAC 207
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: C5LYY5_PERM5 (Rab7, putative n=6 Tax=Perkinsus TaxID=28000 RepID=C5LYY5_PERM5) HSP 1 Score: 208 bits (529), Expect = 8.960e-65 Identity = 100/182 (54.95%), Postives = 134/182 (73.63%), Query Frame = 1
Query: 4 PSRKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEA-NNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSE 546
P +K+ LKV+++GDS +GKT+L+ +Y+ K+F+ YKATIGADFL ++V + D VVT+Q+WDTAGQER+QSL +YRGAD C LV+D TNP SFE L WR EFL+Q P DP+ FPF+VVGNK D+E+K V A WC + +NI C F+TSA+D +NV +AF E+A RRA ++E
Sbjct: 5 PRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWDTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVVGNKLDMEAKRKVSKARATTWCRSKDNIPC--FETSAKDSLNVEQAFIEIA----RRALQNE 180
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: A0A3M7PRT5_BRAPC (Ras-related Rab-7a n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7PRT5_BRAPC) HSP 1 Score: 207 bits (528), Expect = 9.840e-65 Identity = 96/189 (50.79%), Postives = 136/189 (71.96%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWC-EANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTV 573
+K+ LKV+++GDS +GKT+L+ +Y+ K+F YKATIGADFL ++V + D +VTMQ+WDTAGQER+QSL +YRGAD CVLV+D T+P+SF+ L WR EFL+Q P DP+ FPF+V+GNK DL VP+ A++WC E NN+ YF+TSA++ +NV +AF+ +A A R + + P+ V
Sbjct: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFNNQYKATIGADFLTKEVMIDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPSSFKNLESWRDEFLIQASPRDPENFPFVVIGNKVDLADSRTVPTKRAQQWCSEKNNVP--YFETSAKEALNVEQAFQTIAKNALAREKEQDTYEDVPSIV 191
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: H3G9D1_PHYRM (Uncharacterized protein n=39 Tax=Oomycota TaxID=4762 RepID=H3G9D1_PHYRM) HSP 1 Score: 207 bits (528), Expect = 1.230e-64 Identity = 100/213 (46.95%), Postives = 147/213 (69.01%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFV--------HSPTTVALTAPPPTTKKSQSDCC 624
+K+ LK++++GDS +GKT+L+ +Y+ ++F+ YKATIGADFL +++ L D +VTMQ+WDTAGQER+QSL +YRGADACVLV+D TNP SFEKL WR EFL Q P DPD FPF+V+GNK D ES+ V + A+ WC A N+ ++++TSA++ +V EAF+ +A A ++ + + + P T+ L+ ++K+ S CC
Sbjct: 5 KKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESERRVQKEKAQEWCRAKNMQ-QHYETSAKEATSVEEAFQTIASSALQKGQDDDILIVWLLLWRSYVPETIDLSGT--SSKRESSSCC 214
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: W4GGR1_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GGR1_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.590e-64 Identity = 98/207 (47.34%), Postives = 142/207 (68.60%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNIT--CKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPPPTTKKSQSDCC 624
+K+ LKV+++GDS +GKT+L+ +Y+ +RFT YKATIGADFL +++ + +VTMQ+WDTAGQER+QSL +YRGADACVLV+D TNPASF+KL WR EFL Q P +P FPF+V+GNK D E++ V + A++WC++ N +F+TSA++ +V +AF+ +A +A ++ FV + T A +TK CC
Sbjct: 5 KKVLLKVIILGDSGVGKTSLMNQYVNQRFTNQYKATIGADFLTKEIMSDEKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPASFDKLDSWRDEFLAQAGPREPGAFPFIVLGNKVDQEAERRVSTQKAQQWCKSKNTDQPISFFETSAKEATSVEDAFQTIAKIALQKGQEENIFVPATTIDLSGAASKSTKGGSGSCC 211
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Match: A0A0C9RTE0_9HYME (Rab7a_0 protein n=80 Tax=Eumetazoa TaxID=6072 RepID=A0A0C9RTE0_9HYME) HSP 1 Score: 207 bits (526), Expect = 1.980e-64 Identity = 99/205 (48.29%), Postives = 140/205 (68.29%), Query Frame = 1
Query: 10 RKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRLGDTVVTMQVWDTAGQERYQSLNCTYYRGADACVLVFDKTNPASFEKLAYWRAEFLLQGDPADPDTFPFLVVGNKCDLESKYVVPSDTARRWCEANNITCKYFDTSARDDVNVAEAFREVAVVAARRAARSERFVHSPTTVALTAPPPTTKKSQSDCC 624
+K+ LKV+++GDS +GKT+L+ +Y+ K+F+ YKATIGADFL ++V + D +VTMQ+WDTAGQER+QSL +YRGAD CVLVFD P SF+ L WR EFL+Q P DPD FPF+V+GNK D E++ V A++WC++ N YF+TSA++ +NV +AF+ +A A + + E + P + LT T +K S C
Sbjct: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVAAPTSFKSLDSWRDEFLIQASPRDPDNFPFVVLGNKIDFENR-AVSMKRAQQWCQSKN-NIPYFETSAKEAINVEQAFQTIAKNALAQESEVELYNEFPDQIKLTNDQRTNEKGDSCAC 207 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10801.1079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10801.1079.1 >prot_S-firma_F_contig10801.1079.1 ID=prot_S-firma_F_contig10801.1079.1|Name=mRNA_S-firma_F_contig10801.1079.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=209bp PPSRKLFLKVVVIGDSDIGKTALLERYIKKRFTGTYKATIGADFLCRDVRback to top mRNA from alignment at S-firma_F_contig10801:1109..1980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10801.1079.1 ID=mRNA_S-firma_F_contig10801.1079.1|Name=mRNA_S-firma_F_contig10801.1079.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=872bp|location=Sequence derived from alignment at S-firma_F_contig10801:1109..1980- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10801:1109..1980- >mRNA_S-firma_F_contig10801.1079.1 ID=mRNA_S-firma_F_contig10801.1079.1|Name=mRNA_S-firma_F_contig10801.1079.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1254bp|location=Sequence derived from alignment at S-firma_F_contig10801:1109..1980- (Sphaerotrichia firma ET2_F female)back to top |