mRNA_S-firma_F_contig10799.1068.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A7S1GCS6_9STRA (Tyrosine--tRNA ligase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCS6_9STRA) HSP 1 Score: 318 bits (814), Expect = 3.040e-105 Identity = 154/236 (65.25%), Postives = 186/236 (78.81%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
A++EIN R EYW RVMD+A + L R++RC TIMGR E D++S +QI YP MQCAD+FFL+ADICQLGMDQRKVNMLAREYCD +PKI+ KP+I+SH ML GLK GQEKMSKSDP SAIFMEDTAA+V KIK+A C PG VA NPVL+W RH+VF + TV+R+ GG +T+ SADE++A FAAG LHP LK AL ELNAML+PVR HF+SG+P LL++VK +R TR
Sbjct: 143 ASDEINKRPAEYWGRVMDVAMRNNLARIQRCCTIMGRKEADEMSASQIFYPCMQCADVFFLEADICQLGMDQRKVNMLAREYCDATRPKIKHKPIIVSHHMLAGLKEGQEKMSKSDPDSAIFMEDTAADVKRKIKRAFCPPGVVAGNPVLDWCRHIVFARNGSMTVRRKPDNGGDVTFASADEMEAAFAAGDLHPSDLKGALTEELNAMLQPVRDHFASGRPKALLEKVKKYRVTR 378
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: D3BAK8_POLPP (Tyrosine--tRNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAK8_POLPP) HSP 1 Score: 304 bits (778), Expect = 1.180e-99 Identity = 146/237 (61.60%), Postives = 188/237 (79.32%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPA-QLLKRVKAFRTTR 708
+++EIN +++YW++VMDI+ KF +PR+KRC IMGR +EDDLS AQ+LYP MQCADIF+LKADICQLGMDQRKVNMLA EYCD K K++ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++VN KIKK +C PG + KNP+L++++H++ KF EFT+ R+E GG+ TY +++AD+A+G LHP LK A+A LN +L+PVR HF + K A QLLK VK++ TR
Sbjct: 154 SSDEINKNANDYWLKVMDISRKFNIPRIKRCAQIMGRNDEDDLSVAQVLYPCMQCADIFYLKADICQLGMDQRKVNMLALEYCD--KLKMKHKPVIVSHHMLMGLKEGQEKMSKSDPESAIFMEDTESDVNLKIKKGYCPPGVIEKNPILDYIKHIIMQKFEEFTIVRDEKNGGTKTYTKYADLEADYASGALHPSDLKPAVALALNKILQPVRDHFVNNKEAAQLLKTVKSYSVTR 388
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: UPI0006450784 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450784) HSP 1 Score: 301 bits (772), Expect = 9.260e-99 Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLL-KRVKAFRTTR 708
+++EIN +++YW++VMDI+ KF +PR+KRC IMGR +EDDLS AQ+LYP MQCADIFFLKADICQLGMDQRKVNMLA EYCD K KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT EV+TKIKK C PG + KNP++++++H++F KF FTV R + +GG+ TY S E +ADFA+ LHP LK A+A +N +L+PVR HF++ K A LL K +K + TR
Sbjct: 153 SSDEINKNANDYWLKVMDISRKFNIPRIKRCAQIMGRNDEDDLSVAQVLYPCMQCADIFFLKADICQLGMDQRKVNMLALEYCD--KSKIKHKPVIVSHHMLMGLKEGQEKMSKSDPDSAIFMEDTEQEVSTKIKKGFCPPGVIEKNPIMDYLKHIIFQKFETFTVLRPDDKGGNKTYTSYAECEADFASNALHPSDLKPAVALAINKILQPVRDHFTNNKEAALLLKTIKGYNVTR 387
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: F4QCF3_CAVFA (Tyrosine--tRNA ligase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCF3_CAVFA) HSP 1 Score: 300 bits (768), Expect = 3.500e-98 Identity = 147/237 (62.03%), Postives = 186/237 (78.48%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
+++EIN +++YW+RVMDIA KF +PR+KRC IMGRG+EDDLS AQILYP MQCADIF+LKADICQLG+DQRKVNMLA EYC+ K KI+ KP+I+SH MLMGLK GQEKMSKSDP SAIFMED+ +V TKIKK +C PG KNP+L++++H+VF KF FT+ R+E GG+ TY S DEV+ DF + LHP LK A+A +N +L+PVR HF++ K A LLK V+++ TR
Sbjct: 151 SSDEINKGANDYWLRVMDIARKFNVPRIKRCSQIMGRGDEDDLSVAQILYPCMQCADIFYLKADICQLGLDQRKVNMLALEYCE--KLKIKHKPIIVSHHMLMGLKEGQEKMSKSDPESAIFMEDSEQDVRTKIKKGYCPPGVAEKNPILDYLKHIVFQKFDTFTITRKEENGGNKTYTSYDEVEKDFVSLALHPSDLKPAMADAINKILQPVRDHFTNNKEAAALLKTVRSYSVTR 385
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A6G0XTC8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTC8_9STRA) HSP 1 Score: 300 bits (768), Expect = 6.930e-98 Identity = 146/237 (61.60%), Postives = 185/237 (78.06%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
A++EINA +DEYW RV+D+A KF + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD AK I+FKPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++V+ KIKKA+C PGE+ NP++++++H++F F + VKR+E GG TY + DE+ AD+ A +HP LK L LN +LEPVRKHF G+P +LL +K F+ TR
Sbjct: 173 ASDEINAHADEYWTRVIDVARKFNIARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAK--IKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEIEGNPIMDYMKHIIFPMFPQGVIVKRKEDFGGDKTYMTYDEMAADYLAEAIHPGDLKPTLTEYLNQILEPVRKHFEQGEPKKLLAEIKKFKVTR 407
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: M2WZ79_GALSU (Tyrosine--tRNA ligase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZ79_GALSU) HSP 1 Score: 297 bits (761), Expect = 4.550e-97 Identity = 149/237 (62.87%), Postives = 179/237 (75.53%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
A+EEIN + +EYWMRVMDIA KLPR+ RC IMGR + D+LS AQI YP MQCADIFFLKADICQLGMDQRKVNMLAREYCD KPK +FKP+ILSH ML GLK GQEKMSKSDP SAIFMED+ +VN KIK+A C P +V NP L +V++++ + EF+V R E GG +TY S E+ D+ GRLHP LK ALA+ +NA+LEPVR HF K A+ LL++V+ +R TR
Sbjct: 153 ASEEINRKPNEYWMRVMDIARVNKLPRIVRCSQIMGRNDTDELSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNMLAREYCDDIKPKKKFKPIILSHHMLPGLKQGQEKMSKSDPDSAIFMEDSEQDVNRKIKRAFCPPEQVQGNPCLEYVQYLILERNGEFSVDRSEENGGPVTYRSVVELHKDYENGRLHPNDLKPALAKSINALLEPVRSHFEQDKDAKALLEKVRKYRATR 389
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A024TVJ6_9STRA (Tyrosine--tRNA ligase n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TVJ6_9STRA) HSP 1 Score: 297 bits (761), Expect = 8.690e-97 Identity = 146/237 (61.60%), Postives = 185/237 (78.06%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
A++EINA +DEYW RV+D+A KF + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD AK I+FKPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++V+ KIKKA+C PGEV NP++++++H++F F + VKR+E GG TY + DE+ AD+ A +HP LK +L LN +LEPVRKHF G+ +LL +K F+ TR
Sbjct: 176 ASDEINAHADEYWTRVIDVARKFNVARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAK--IKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEVDGNPIMDYMKHIIFPMFPDGVVVKRKEEFGGDKTYLTYDEMAADYLAEAIHPGDLKPSLTEHLNLILEPVRKHFEQGEAKKLLAEIKKFKITR 410
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A5A8DA03_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA03_CAFRO) HSP 1 Score: 298 bits (764), Expect = 1.080e-96 Identity = 156/237 (65.82%), Postives = 183/237 (77.22%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
A++EINAR DEYW VMDIA + L R+KRC TIMGR E D+LS AQ+LYP MQCADIF+LKADICQLGMDQRKVNMLAREYC +K K KPVILSH MLMGLK GQEKMSKSDP SAIFMED A V +KIKKA C G V NPVL+W +H+VFG+ S +TV+R E +GG TY S + ++ADF +G LHP LK +LA +N ++EPVRKHF+S A+ LLKRVKAF+ TR
Sbjct: 218 ASDEINARPDEYWSLVMDIARQNSLARIKRCCTIMGRAEADELSAAQVLYPCMQCADIFYLKADICQLGMDQRKVNMLAREYCTASKRKN--KPVILSHHMLMGLKEGQEKMSKSDPNSAIFMEDDAMTVRSKIKKAFCPIGVVDGNPVLDWTKHLVFGRESSWTVERAEKDGGPQTYASYEALEADFVSGALHPSDLKTSLAATINDLIEPVRKHFTSDPKAKALLKRVKAFKVTR 452
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A1V9ZR79_9STRA (Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZR79_9STRA) HSP 1 Score: 295 bits (754), Expect = 8.790e-96 Identity = 144/237 (60.76%), Postives = 186/237 (78.48%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
A++EINA +DEYW RV+D+A +F + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD + KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDTA++V+ KIKKA+C PG+V NP++++++H++F F+ TVKR+E GG TY + +E+ AD+ A +HP LK L LN +LEPVR HFS G+P +LL +K F+ TR
Sbjct: 172 ASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYMTYEELAADYLAEAIHPGDLKPTLTDYLNQILEPVRAHFSQGEPKKLLAEIKKFKITR 406
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A1W0A2D4_9STRA (Tyrosine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D4_9STRA) HSP 1 Score: 294 bits (753), Expect = 2.020e-95 Identity = 144/237 (60.76%), Postives = 186/237 (78.48%), Query Frame = 1
Query: 1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
A++EINA +DEYW RV+D+A +F + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD + KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDTA++V+ KIKKA+C PG+V NP+L++++H+VF F++ VKR+E GG TY + DE+ AD+ +HP LK L LN +LEPVR+HFS G+P +LL +K ++ TR
Sbjct: 188 ASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPILDYMKHIVFPLFTKGVVVKRKEEFGGDKTYMTFDELAADYLTEAIHPGDLKPTLTDYLNQILEPVRQHFSQGEPKKLLAEIKKYKITR 422 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10799.1068.1 >prot_S-firma_F_contig10799.1068.1 ID=prot_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYback to top mRNA from alignment at S-firma_F_contig10799:4020..4955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10799.1068.1 ID=mRNA_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=936bp|location=Sequence derived from alignment at S-firma_F_contig10799:4020..4955- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10799:4020..4955- >mRNA_S-firma_F_contig10799.1068.1 ID=mRNA_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1422bp|location=Sequence derived from alignment at S-firma_F_contig10799:4020..4955- (Sphaerotrichia firma ET2_F female)back to top |