mRNA_S-firma_F_contig10799.1068.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10799.1068.1
Unique NamemRNA_S-firma_F_contig10799.1068.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A7S1GCS6_9STRA (Tyrosine--tRNA ligase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCS6_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.040e-105
Identity = 154/236 (65.25%), Postives = 186/236 (78.81%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
            A++EIN R  EYW RVMD+A +  L R++RC TIMGR E D++S +QI YP MQCAD+FFL+ADICQLGMDQRKVNMLAREYCD  +PKI+ KP+I+SH ML GLK GQEKMSKSDP SAIFMEDTAA+V  KIK+A C PG VA NPVL+W RH+VF +    TV+R+   GG +T+ SADE++A FAAG LHP  LK AL  ELNAML+PVR HF+SG+P  LL++VK +R TR
Sbjct:  143 ASDEINKRPAEYWGRVMDVAMRNNLARIQRCCTIMGRKEADEMSASQIFYPCMQCADVFFLEADICQLGMDQRKVNMLAREYCDATRPKIKHKPIIVSHHMLAGLKEGQEKMSKSDPDSAIFMEDTAADVKRKIKRAFCPPGVVAGNPVLDWCRHIVFARNGSMTVRRKPDNGGDVTFASADEMEAAFAAGDLHPSDLKGALTEELNAMLQPVRDHFASGRPKALLEKVKKYRVTR 378          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: D3BAK8_POLPP (Tyrosine--tRNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAK8_POLPP)

HSP 1 Score: 304 bits (778), Expect = 1.180e-99
Identity = 146/237 (61.60%), Postives = 188/237 (79.32%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPA-QLLKRVKAFRTTR 708
            +++EIN  +++YW++VMDI+ KF +PR+KRC  IMGR +EDDLS AQ+LYP MQCADIF+LKADICQLGMDQRKVNMLA EYCD  K K++ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++VN KIKK +C PG + KNP+L++++H++  KF EFT+ R+E  GG+ TY    +++AD+A+G LHP  LK A+A  LN +L+PVR HF + K A QLLK VK++  TR
Sbjct:  154 SSDEINKNANDYWLKVMDISRKFNIPRIKRCAQIMGRNDEDDLSVAQVLYPCMQCADIFYLKADICQLGMDQRKVNMLALEYCD--KLKMKHKPVIVSHHMLMGLKEGQEKMSKSDPESAIFMEDTESDVNLKIKKGYCPPGVIEKNPILDYIKHIIMQKFEEFTIVRDEKNGGTKTYTKYADLEADYASGALHPSDLKPAVALALNKILQPVRDHFVNNKEAAQLLKTVKSYSVTR 388          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: UPI0006450784 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450784)

HSP 1 Score: 301 bits (772), Expect = 9.260e-99
Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLL-KRVKAFRTTR 708
            +++EIN  +++YW++VMDI+ KF +PR+KRC  IMGR +EDDLS AQ+LYP MQCADIFFLKADICQLGMDQRKVNMLA EYCD  K KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT  EV+TKIKK  C PG + KNP++++++H++F KF  FTV R + +GG+ TY S  E +ADFA+  LHP  LK A+A  +N +L+PVR HF++ K A LL K +K +  TR
Sbjct:  153 SSDEINKNANDYWLKVMDISRKFNIPRIKRCAQIMGRNDEDDLSVAQVLYPCMQCADIFFLKADICQLGMDQRKVNMLALEYCD--KSKIKHKPVIVSHHMLMGLKEGQEKMSKSDPDSAIFMEDTEQEVSTKIKKGFCPPGVIEKNPIMDYLKHIIFQKFETFTVLRPDDKGGNKTYTSYAECEADFASNALHPSDLKPAVALAINKILQPVRDHFTNNKEAALLLKTIKGYNVTR 387          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: F4QCF3_CAVFA (Tyrosine--tRNA ligase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCF3_CAVFA)

HSP 1 Score: 300 bits (768), Expect = 3.500e-98
Identity = 147/237 (62.03%), Postives = 186/237 (78.48%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
            +++EIN  +++YW+RVMDIA KF +PR+KRC  IMGRG+EDDLS AQILYP MQCADIF+LKADICQLG+DQRKVNMLA EYC+  K KI+ KP+I+SH MLMGLK GQEKMSKSDP SAIFMED+  +V TKIKK +C PG   KNP+L++++H+VF KF  FT+ R+E  GG+ TY S DEV+ DF +  LHP  LK A+A  +N +L+PVR HF++ K A  LLK V+++  TR
Sbjct:  151 SSDEINKGANDYWLRVMDIARKFNVPRIKRCSQIMGRGDEDDLSVAQILYPCMQCADIFYLKADICQLGLDQRKVNMLALEYCE--KLKIKHKPIIVSHHMLMGLKEGQEKMSKSDPESAIFMEDSEQDVRTKIKKGYCPPGVAEKNPILDYLKHIVFQKFDTFTITRKEENGGNKTYTSYDEVEKDFVSLALHPSDLKPAMADAINKILQPVRDHFTNNKEAAALLKTVRSYSVTR 385          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A6G0XTC8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTC8_9STRA)

HSP 1 Score: 300 bits (768), Expect = 6.930e-98
Identity = 146/237 (61.60%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
            A++EINA +DEYW RV+D+A KF + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD AK  I+FKPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++V+ KIKKA+C PGE+  NP++++++H++F  F +   VKR+E  GG  TY + DE+ AD+ A  +HP  LK  L   LN +LEPVRKHF  G+P +LL  +K F+ TR
Sbjct:  173 ASDEINAHADEYWTRVIDVARKFNIARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAK--IKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEIEGNPIMDYMKHIIFPMFPQGVIVKRKEDFGGDKTYMTYDEMAADYLAEAIHPGDLKPTLTEYLNQILEPVRKHFEQGEPKKLLAEIKKFKVTR 407          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: M2WZ79_GALSU (Tyrosine--tRNA ligase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZ79_GALSU)

HSP 1 Score: 297 bits (761), Expect = 4.550e-97
Identity = 149/237 (62.87%), Postives = 179/237 (75.53%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
            A+EEIN + +EYWMRVMDIA   KLPR+ RC  IMGR + D+LS AQI YP MQCADIFFLKADICQLGMDQRKVNMLAREYCD  KPK +FKP+ILSH ML GLK GQEKMSKSDP SAIFMED+  +VN KIK+A C P +V  NP L +V++++  +  EF+V R E  GG +TY S  E+  D+  GRLHP  LK ALA+ +NA+LEPVR HF   K A+ LL++V+ +R TR
Sbjct:  153 ASEEINRKPNEYWMRVMDIARVNKLPRIVRCSQIMGRNDTDELSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNMLAREYCDDIKPKKKFKPIILSHHMLPGLKQGQEKMSKSDPDSAIFMEDSEQDVNRKIKRAFCPPEQVQGNPCLEYVQYLILERNGEFSVDRSEENGGPVTYRSVVELHKDYENGRLHPNDLKPALAKSINALLEPVRSHFEQDKDAKALLEKVRKYRATR 389          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A024TVJ6_9STRA (Tyrosine--tRNA ligase n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TVJ6_9STRA)

HSP 1 Score: 297 bits (761), Expect = 8.690e-97
Identity = 146/237 (61.60%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
            A++EINA +DEYW RV+D+A KF + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD AK  I+FKPVI+SH MLMGLK GQEKMSKSDP SAIFMEDT ++V+ KIKKA+C PGEV  NP++++++H++F  F +   VKR+E  GG  TY + DE+ AD+ A  +HP  LK +L   LN +LEPVRKHF  G+  +LL  +K F+ TR
Sbjct:  176 ASDEINAHADEYWTRVIDVARKFNVARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAK--IKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEVDGNPIMDYMKHIIFPMFPDGVVVKRKEEFGGDKTYLTYDEMAADYLAEAIHPGDLKPSLTEHLNLILEPVRKHFEQGEAKKLLAEIKKFKITR 410          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A5A8DA03_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA03_CAFRO)

HSP 1 Score: 298 bits (764), Expect = 1.080e-96
Identity = 156/237 (65.82%), Postives = 183/237 (77.22%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQ-LLKRVKAFRTTR 708
            A++EINAR DEYW  VMDIA +  L R+KRC TIMGR E D+LS AQ+LYP MQCADIF+LKADICQLGMDQRKVNMLAREYC  +K K   KPVILSH MLMGLK GQEKMSKSDP SAIFMED A  V +KIKKA C  G V  NPVL+W +H+VFG+ S +TV+R E +GG  TY S + ++ADF +G LHP  LK +LA  +N ++EPVRKHF+S   A+ LLKRVKAF+ TR
Sbjct:  218 ASDEINARPDEYWSLVMDIARQNSLARIKRCCTIMGRAEADELSAAQVLYPCMQCADIFYLKADICQLGMDQRKVNMLAREYCTASKRKN--KPVILSHHMLMGLKEGQEKMSKSDPNSAIFMEDDAMTVRSKIKKAFCPIGVVDGNPVLDWTKHLVFGRESSWTVERAEKDGGPQTYASYEALEADFVSGALHPSDLKTSLAATINDLIEPVRKHFTSDPKAKALLKRVKAFKVTR 452          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A1V9ZR79_9STRA (Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZR79_9STRA)

HSP 1 Score: 295 bits (754), Expect = 8.790e-96
Identity = 144/237 (60.76%), Postives = 186/237 (78.48%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
            A++EINA +DEYW RV+D+A +F + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD  + KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDTA++V+ KIKKA+C PG+V  NP++++++H++F  F+   TVKR+E  GG  TY + +E+ AD+ A  +HP  LK  L   LN +LEPVR HFS G+P +LL  +K F+ TR
Sbjct:  172 ASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYMTYEELAADYLAEAIHPGDLKPTLTDYLNQILEPVRAHFSQGEPKKLLAEIKKFKITR 406          
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Match: A0A1W0A2D4_9STRA (Tyrosine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D4_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.020e-95
Identity = 144/237 (60.76%), Postives = 186/237 (78.48%), Query Frame = 1
Query:    1 ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILYPAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHPMLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVLNWVRHVVFGKFSE-FTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKDALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR 708
            A++EINA +DEYW RV+D+A +F + R++RC TIMGR E DD+S AQ++YP MQCAD+FFLKADICQLG+DQRKVNMLAREYCD  + KI+ KPVI+SH MLMGLK GQEKMSKSDP SAIFMEDTA++V+ KIKKA+C PG+V  NP+L++++H+VF  F++   VKR+E  GG  TY + DE+ AD+    +HP  LK  L   LN +LEPVR+HFS G+P +LL  +K ++ TR
Sbjct:  188 ASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPILDYMKHIVFPLFTKGVVVKRKEEFGGDKTYMTFDELAADYLTEAIHPGDLKPTLTDYLNQILEPVRQHFSQGEPKKLLAEIKKYKITR 422          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10799.1068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GCS6_9STRA3.040e-10565.25Tyrosine--tRNA ligase n=1 Tax=Bicosoecida sp. CB-2... [more]
D3BAK8_POLPP1.180e-9961.60Tyrosine--tRNA ligase n=1 Tax=Polysphondylium pall... [more]
UPI00064507849.260e-9962.03hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4QCF3_CAVFA3.500e-9862.03Tyrosine--tRNA ligase n=1 Tax=Cavenderia fascicula... [more]
A0A6G0XTC8_9STRA6.930e-9861.60Tyrosine--tRNA ligase n=1 Tax=Aphanomyces euteiche... [more]
M2WZ79_GALSU4.550e-9762.87Tyrosine--tRNA ligase n=1 Tax=Galdieria sulphurari... [more]
A0A024TVJ6_9STRA8.690e-9761.60Tyrosine--tRNA ligase n=9 Tax=Aphanomyces TaxID=10... [more]
A0A5A8DA03_CAFRO1.080e-9665.82Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A1V9ZR79_9STRA8.790e-9660.76Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxI... [more]
A0A1W0A2D4_9STRA2.020e-9560.76Tyrosine--tRNA ligase n=1 Tax=Thraustotheca clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10799contigS-firma_F_contig10799:4020..4955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog130081.XP_005705890.1
Preferred nameYARS
PFAMstRNA-synt_1b,tRNA_bind
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0000166,GO:0001664,GO:0002181,GO:0002682,GO:0002685,GO:0002688,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004831,GO:0004832,GO:0005102,GO:0005126,GO:0005153,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006915,GO:0006935,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009605,GO:0009966,GO:0009987,GO:0010467,GO:0010469,GO:0010494,GO:0010646,GO:0010758,GO:0012501,GO:0016070,GO:0016597,GO:0016604,GO:0016874,GO:0016875,GO:0017076,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0023051,GO:0030334,GO:0030545,GO:0030554,GO:0031406,GO:0031974,GO:0031981,GO:0032101,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0040011,GO:0040012,GO:0042056,GO:0042221,GO:0042330,GO:0042379,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045236,GO:0046483,GO:0046983,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0050920,GO:0051270,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0072545,GO:0090304,GO:0097159,GO:0097367,GO:0098772,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905521,GO:1990904,GO:2000145
Evalue7.46e-98
EggNOG OGsCOG0162@1|root,KOG2144@2759|Eukaryota
EC6.1.1.1
Descriptiontyrosine-tRNA ligase activity
COG categoryJ
BiGG ReactioniMM904.YGR185C,iND750.YGR185C
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Exons5
Model size711
Cds size711
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10799.1068.1prot_S-firma_F_contig10799.1068.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10799 4020..4955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815622.027878-CDS-S-firma_F_contig10799:4019..41071622815622.027878-CDS-S-firma_F_contig10799:4019..4107Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4020..4107 -
1696949460.0352027-CDS-S-firma_F_contig10799:4019..41071696949460.0352027-CDS-S-firma_F_contig10799:4019..4107Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4020..4107 -
1622815622.0384521-CDS-S-firma_F_contig10799:4170..42661622815622.0384521-CDS-S-firma_F_contig10799:4170..4266Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4171..4266 -
1696949460.0560718-CDS-S-firma_F_contig10799:4170..42661696949460.0560718-CDS-S-firma_F_contig10799:4170..4266Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4171..4266 -
1622815622.0490603-CDS-S-firma_F_contig10799:4319..44651622815622.0490603-CDS-S-firma_F_contig10799:4319..4465Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4320..4465 -
1696949460.0649629-CDS-S-firma_F_contig10799:4319..44651696949460.0649629-CDS-S-firma_F_contig10799:4319..4465Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4320..4465 -
1622815622.0609066-CDS-S-firma_F_contig10799:4519..46021622815622.0609066-CDS-S-firma_F_contig10799:4519..4602Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4520..4602 -
1696949460.0742624-CDS-S-firma_F_contig10799:4519..46021696949460.0742624-CDS-S-firma_F_contig10799:4519..4602Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4520..4602 -
1622815622.0747008-CDS-S-firma_F_contig10799:4657..49551622815622.0747008-CDS-S-firma_F_contig10799:4657..4955Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4658..4955 -
1696949460.0861135-CDS-S-firma_F_contig10799:4657..49551696949460.0861135-CDS-S-firma_F_contig10799:4657..4955Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10799 4658..4955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10799.1068.1

>prot_S-firma_F_contig10799.1068.1 ID=prot_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
ATEEINARSDEYWMRVMDIATKFKLPRMKRCGTIMGRGEEDDLSTAQILY
PAMQCADIFFLKADICQLGMDQRKVNMLAREYCDMAKPKIRFKPVILSHP
MLMGLKVGQEKMSKSDPASAIFMEDTAAEVNTKIKKAHCAPGEVAKNPVL
NWVRHVVFGKFSEFTVKREESEGGSITYHSADEVDADFAAGRLHPKPLKD
ALARELNAMLEPVRKHFSSGKPAQLLKRVKAFRTTR*
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mRNA from alignment at S-firma_F_contig10799:4020..4955-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10799.1068.1 ID=mRNA_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=936bp|location=Sequence derived from alignment at S-firma_F_contig10799:4020..4955- (Sphaerotrichia firma ET2_F female)
GCCACAGAGGAGATCAACGCCCGCTCGGACGAGTACTGGATGCGGGTCAT GGACATTGCGACCAAATTCAAGCTGCCGCGCATGAAGCGGTGTGGTACCA TCATGGGGCGCGGCGAGGAGGATGACCTCAGCACCGCCCAAATCCTGTAC CCCGCCATGCAGTGCGCCGACATTTTCTTCCTCAAGGCAGACATTTGCCA GCTGGGCATGGACCAGCGCAAGGTGAACATGTTGGCCCGCGAGTACTGCG ACATGGCAAAGCCCAAGATTCGGTTCAAGCCCGTGATTTTGTCCCACCGT GAGTTGCCCCCCCGCCCCCCGCATGATTCTGGCCCTCGGTAACCCCCCCC CAGCCATGCTCATGGGCTTGAAGGTTGGCCAGGAAAAGATGAGCAAGTCT GACCCCGCGTCAGCCATTTTTATGGAGGACACGGCGGTGTGTTTTGTGTT TTGTGTGCGGGTGGGTGCAAGCTGCTCAAACCCTCCCCAGGCCGAAGTCA ACACAAAGATCAAGAAGGCCCACTGCGCACCTGGTGAGGTGGCCAAGAAC CCAGTCCTGAACTGGGTGCGCCACGTTGTGTTTGGCAAGTTCTCGGAGTT CACCGTGAAGCGGGAGGAGAGCGAAGGCGGCAGCATGTGCGTGGCGGCGT GTGGGTCCACCGTTGCCATGCTGTTACCCCCCCCACCAGCACGTACCACT CCGCAGACGAAGTGGACGCAGACTTTGCGGCCGGAAGGTTGCACCCGAAG CCCCTCAAGGATGCCCTCGCCCGGGAGCTCAACGCGTGCGTACCACCACG GCTCCCGTGTCGCTTCCTCCTGACCACCCCCCCCTTGCCCCCTTGCAGCA TGCTGGAGCCCGTCCGGAAGCACTTTTCATCGGGGAAGCCGGCGCAGCTG CTGAAGCGGGTCAAGGCGTTCCGCACGACGCGTTAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10799:4020..4955-

>mRNA_S-firma_F_contig10799.1068.1 ID=mRNA_S-firma_F_contig10799.1068.1|Name=mRNA_S-firma_F_contig10799.1068.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1422bp|location=Sequence derived from alignment at S-firma_F_contig10799:4020..4955- (Sphaerotrichia firma ET2_F female)
GCCACAGAGGAGATCAACGCCCGCTCGGACGAGTACTGGATGCGGGTCAT
GGACATTGCGACCAAATTCAAGCTGCCGCGCATGAAGCGGTGTGGTACCA
TCATGGGGCGCGGCGAGGAGGATGACCTCAGCACCGCCCAAATCCTGTAC
CCCGCCATGCAGTGCGCCGACATTTTCTTCCTCAAGGCAGACATTTGCCA
GCTGGGCATGGACCAGCGCAAGGTGAACATGTTGGCCCGCGAGTACTGCG
ACATGGCAAAGCCCAAGATTCGGTTCAAGCCCGTGATTTTGTCCCACCGC
CACAGAGGAGATCAACGCCCGCTCGGACGAGTACTGGATGCGGGTCATGG
ACATTGCGACCAAATTCAAGCTGCCGCGCATGAAGCGGTGTGGTACCATC
ATGGGGCGCGGCGAGGAGGATGACCTCAGCACCGCCCAAATCCTGTACCC
CGCCATGCAGTGCGCCGACATTTTCTTCCTCAAGGCAGACATTTGCCAGC
TGGGCATGGACCAGCGCAAGGTGAACATGTTGGCCCGCGAGTACTGCGAC
ATGGCAAAGCCCAAGATTCGGTTCAAGCCCGTGATTTTGTCCCACCCCAT
GCTCATGGGCTTGAAGGTTGGCCAGGAAAAGATGAGCAAGTCTGACCCCG
CGTCAGCCATTTTTATGGAGGACACGGCGCCATGCTCATGGGCTTGAAGG
TTGGCCAGGAAAAGATGAGCAAGTCTGACCCCGCGTCAGCCATTTTTATG
GAGGACACGGCGGCCGAAGTCAACACAAAGATCAAGAAGGCCCACTGCGC
ACCTGGTGAGGTGGCCAAGAACCCAGTCCTGAACTGGGTGCGCCACGTTG
TGTTTGGCAAGTTCTCGGAGTTCACCGTGAAGCGGGAGGAGAGCGAAGGC
GGCAGCATGCCGAAGTCAACACAAAGATCAAGAAGGCCCACTGCGCACCT
GGTGAGGTGGCCAAGAACCCAGTCCTGAACTGGGTGCGCCACGTTGTGTT
TGGCAAGTTCTCGGAGTTCACCGTGAAGCGGGAGGAGAGCGAAGGCGGCA
GCATCACGTACCACTCCGCAGACGAAGTGGACGCAGACTTTGCGGCCGGA
AGGTTGCACCCGAAGCCCCTCAAGGATGCCCTCGCCCGGGAGCTCAACGC
CACGTACCACTCCGCAGACGAAGTGGACGCAGACTTTGCGGCCGGAAGGT
TGCACCCGAAGCCCCTCAAGGATGCCCTCGCCCGGGAGCTCAACGCCATG
CTGGAGCCCGTCCGGAAGCACTTTTCATCGGGGAAGCCGGCGCAGCTGCT
GAAGCGGGTCAAGGCGTTCCGCACGACGCGTTAGCATGCTGGAGCCCGTC
CGGAAGCACTTTTCATCGGGGAAGCCGGCGCAGCTGCTGAAGCGGGTCAA
GGCGTTCCGCACGACGCGTTAG
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