mRNA_S-firma_F_contig10798.1066.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A1Y3QTV0_9BACT (Sulfatase domain-containing protein n=4 Tax=Alistipes TaxID=239759 RepID=A0A1Y3QTV0_9BACT) HSP 1 Score: 86.3 bits (212), Expect = 1.670e-17 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 10 PTNAPYLAYHSCLSSQAGVNNSNWGNFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
P NAP +AYH N+ +TDIP+ M P+ A A LR Y+A VS+TD N+G +LD +K GL +DT++ L GDHG+ LGE+ WCK YE
Sbjct: 239 PENAPEIAYH---------NSEELRGYTDIPDLM----PLSAEQEAELRRAYYACVSFTDDNIGAILDRLKELGLYDDTLIVLWGDHGYHLGERELWCKSTVYE 329
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A517Q912_9PLAN (Choline-sulfatase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517Q912_9PLAN) HSP 1 Score: 85.9 bits (211), Expect = 2.290e-17 Identity = 49/109 (44.95%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 10 PTNAPYLAYHSCLSSQAGVNNSNWG---NFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVKGLEND--TIVALVGDHGWGLGEQNAWCKMMNYENE 321
P NAP A N+NWG N++D+P T +LR GY+A VS+TD+N+G +LD +K LE D TIV L GDHGW LGE N WCK N+EN+
Sbjct: 259 PKNAPSYA------------NTNWGELRNYSDMPAKEDLTDEQQL----QLRHGYYACVSFTDANIGKVLDELKRLELDENTIVILWGDHGWKLGEHNGWCKHTNFEND 351
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A517WZE9_9PLAN (Arylsulfatase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WZE9_9PLAN) HSP 1 Score: 82.8 bits (203), Expect = 2.810e-16 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 73 SNWG---NFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVKGLEND--TIVALVGDHGWGLGEQNAWCKMMNYE 315
+NWG N++DIP T+ A +LR GY+A+VS+TD+N+G +LD +K LE D TIV L GDHGW LGE WCK N+E
Sbjct: 266 TNWGELRNYSDIPRKGDLTEEQ----ALKLRHGYYASVSFTDANIGKILDELKRLELDDNTIVILWGDHGWKLGEHAGWCKHTNFE 347
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A517WEZ1_9PLAN (Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WEZ1_9PLAN) HSP 1 Score: 82.8 bits (203), Expect = 2.820e-16 Identity = 47/109 (43.12%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 10 PTNAPYLAYHSCLSSQAGVNNSNWG---NFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVKGLEND--TIVALVGDHGWGLGEQNAWCKMMNYENE 321
P NAP +A +NWG N++D+P T +LR GY+A VS+TD+N+G +LD ++ LE D TIV L GDHGW LGE N WCK N+EN+
Sbjct: 259 PKNAPKIAL------------TNWGELRNYSDMPAKGDLTDEQQL----QLRHGYYACVSFTDANIGKVLDELQRLELDENTIVILWGDHGWKLGEHNGWCKHTNFEND 351
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A4V0XQX2_9BACT (Iduronate-2-sulfatase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4V0XQX2_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 5.550e-16 Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 10 PTNAPYLAYHSCLSSQAGVNNSNWGNF---TDIP--NNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
P P A +S+ A V +S+ G F T++P + P+ AA A+++R GY+AAVSYTD+N+G+LLDA++ G+ ++T++ L GDHGW LG+ W K N+E
Sbjct: 226 PAQIPDTASAFPVSAPAYVGDSDSGEFRAYTNVPPKDKALARTPLPAAFASQVRHGYYAAVSYTDANLGILLDALEKEGIADNTVIVLWGDHGWKLGDHEEWGKHTNFE 334
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A3C0DSK6_9BACT (Iduronate sulfatase n=2 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C0DSK6_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 7.010e-16 Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 10 PTNAPYLAYHSCLSSQAGVNNSNWGNFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
P AP +A H ++ +TDIPNN P+ A LR GY+AA SYTD+ VG +LD +K GLE T+++L DHG+ LGEQN W K+ NY+
Sbjct: 233 PIGAPSIAGHDWREARG---------YTDIPNN----GPLSDNKIAELRHGYYAASSYTDAQVGRVLDELKRLGLEQTTVISLYSDHGFHLGEQNLWGKLTNYD 323
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A7W0MDC9_9PLAN (Sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0MDC9_9PLAN) HSP 1 Score: 81.6 bits (200), Expect = 7.190e-16 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 73 SNWG---NFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAV--KGLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
+NWG N++DIP N +DA A L GY+AA+SYTD+ +G LLDA+ + L +TIV + GDHGW LG+ WCK NYE
Sbjct: 260 TNWGELRNYSDIPENGA----LDADKALELIHGYYAALSYTDAQIGKLLDALDEQNLAENTIVVVWGDHGWKLGDHGMWCKHTNYE 341
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A388PKJ9_9BACT (Iduronate 2-sulfatase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A388PKJ9_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 7.530e-16 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 61 GVNNSNWGNFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
G NNS ++ DI N+ +D A+A RLR GY+AA+SY D+ VGL+LDA++ GL +T++ L GDHGW LGE W K N+E
Sbjct: 251 GHNNSELKSYADIANDGA----IDEATARRLRHGYYAAISYMDAQVGLILDALEKEGLAENTVIVLWGDHGWQLGEHGLWHKHTNFE 333
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A388PQ00_9BACT (Iduronate 2-sulfatase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A388PQ00_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 7.530e-16 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 61 GVNNSNWGNFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
G NNS +++D+P+ P+D +A LR GY+AA+SY D+ VGL+LDA++ GL + T++ L GDHGW LGE W K N+E
Sbjct: 253 GHNNSELKSYSDVPD----VGPVDEQTARHLRHGYYAAISYMDAQVGLILDALEKEGLADHTVIVLWGDHGWQLGEHGLWHKHTNFE 335
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Match: A0A2G4F718_9BACT (Iduronate sulfatase n=2 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2G4F718_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 7.530e-16 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 61 GVNNSNWGNFTDIPNNMTYTQPMDAASAARLRTGYFAAVSYTDSNVGLLLDAVK--GLENDTIVALVGDHGWGLGEQNAWCKMMNYE 315
G NNS ++ DI N+ +D A+A RLR GY+AA+SY D+ VGL+LDA++ GL ++T++ L GDHGW LGE W K N+E
Sbjct: 251 GHNNSELKSYADIANDGA----IDDATARRLRHGYYAAISYMDAQVGLMLDALEKEGLADNTVIVLWGDHGWQLGEHGLWHKHTNFE 333 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10798.1066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10798.1066.1 >prot_S-firma_F_contig10798.1066.1 ID=prot_S-firma_F_contig10798.1066.1|Name=mRNA_S-firma_F_contig10798.1066.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=107bp LDVPTNAPYLAYHSCLSSQAGVNNSNWGNFTDIPNNMTYTQPMDAASAARback to top mRNA from alignment at S-firma_F_contig10798:3640..4163- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10798.1066.1 ID=mRNA_S-firma_F_contig10798.1066.1|Name=mRNA_S-firma_F_contig10798.1066.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=524bp|location=Sequence derived from alignment at S-firma_F_contig10798:3640..4163- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10798:3640..4163- >mRNA_S-firma_F_contig10798.1066.1 ID=mRNA_S-firma_F_contig10798.1066.1|Name=mRNA_S-firma_F_contig10798.1066.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=642bp|location=Sequence derived from alignment at S-firma_F_contig10798:3640..4163- (Sphaerotrichia firma ET2_F female)back to top |