mRNA_S-firma_F_contig10798.1065.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A0L0D7R4_THETB (Endonuclease V family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7R4_THETB) HSP 1 Score: 169 bits (428), Expect = 1.190e-49 Identity = 83/132 (62.88%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 4 PQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVREYM 399
P V+LVDGNG+LH+RGFGLAS LGVL DVPTIGIGK+F H+DG+S++D+VA + VL AGDA+ +VGESGRVWG+AFR++ ES K ++VS GHRV +A+ + R YR+PEPVRQADL+SR+ VR+ M
Sbjct: 160 PDVVLVDGNGVLHRRGFGLASHLGVLIDVPTIGIGKSFYHVDGVSQEDIVATSREVLTAAGDALLVVGESGRVWGAAFRAS-ESRKALYVSSGHRVGLLSALRIVRACARYRIPEPVRQADLLSRDYVRDVM 290
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A7S1GFA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GFA3_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.800e-49 Identity = 83/131 (63.36%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 4 PQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVREY 396
PQV+LVDG+G+LH RGFGLA LGV+AD+PTIG+ K FLH+DGL+K D AA AGDA+DLVG+SGRVWG+A +ST S PIFVS GHR++ ATAV + R C +RVPEPVRQADL SRE +R++
Sbjct: 33 PQVVLVDGSGVLHPRGFGLACHLGVVADIPTIGVCKKFLHVDGLTK-DRAKAAAAANDAAGDAVDLVGDSGRVWGAAVKSTAGSDNPIFVSVGHRIALATAVDVVRACCRFRVPEPVRQADLRSREWLRDH 162
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: D8SHZ0_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SHZ0_SELML) HSP 1 Score: 167 bits (423), Expect = 2.310e-49 Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 1 FPQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
FPQ+++VDGNG+LH RGFGLAS LGVLADVPT+GI K+ +DGLS+++V A L AGDAMDLVG SG+VWGSA RST E P+FVS GHR+S T V + R LC +RVPEPVR AD SRE +R
Sbjct: 122 FPQLLMVDGNGVLHPRGFGLASHLGVLADVPTLGIAKSLFEVDGLSEREVKRSARNSLLRAGDAMDLVGRSGKVWGSALRSTGECVNPVFVSTGHRISLETGVEIVRKLCKFRVPEPVRLADKKSREYLR 251
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: L8GTH2_ACACA (Endonuclease V protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GTH2_ACACA) HSP 1 Score: 156 bits (395), Expect = 3.280e-46 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 10 VILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
V+ VDGNG+LH RGFGLAS LGVL +PTIG+GK F H+DGL ++V A+AA GD + L+G+SG WG+AFRST+ S+ PI+VS GHR+S A+AV LT+ C +RVPEP+RQADL SRE +R
Sbjct: 43 VVFVDGNGVLHPRGFGLASHLGVLIGIPTIGVGKTFFHVDGLDMREVKAQAAAACHKGGDWIPLIGQSGVEWGAAFRSTDGSSNPIYVSVGHRISLASAVLLTQASCLHRVPEPIRQADLRSREFLR 169
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A1Y1I408_KLENI (Endonuclease V n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I408_KLENI) HSP 1 Score: 158 bits (400), Expect = 1.270e-45 Identity = 81/131 (61.83%), Postives = 97/131 (74.05%), Query Frame = 1
Query: 4 PQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVREY 396
PQVILVDGNGILH RGFG A LGV + TIG+GKNF H+DGL+ V ARA G+AMD+VGESGRVWG+A+R+ STKPIFVS GH +S TAV + R C +RVPEPVRQAD+ SRE +R++
Sbjct: 142 PQVILVDGNGILHPRGFGSACHLGVACHMATIGVGKNFFHLDGLTSDGVRARAEARGLQPGEAMDIVGESGRVWGAAYRTHAGSTKPIFVSVGHLLSLDTAVKIVRACCRFRVPEPVRQADMRSRERLRQH 272
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A2R6XIH5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XIH5_MARPO) HSP 1 Score: 159 bits (402), Expect = 1.910e-45 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 1 FPQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
+PQ+++VDGNGILH RGFGLAS LGVLAD+PTIG+GKN H+DGLS +V A+ AG+ + L+G SGRVWG+A RS + KPIF+S GHR+S TA+ + + C +RVPEPVRQAD+ SRE +R
Sbjct: 188 YPQLLMVDGNGILHPRGFGLASHLGVLADIPTIGVGKNLFHVDGLSDAEVRLEASKSDLHAGETVPLIGNSGRVWGAAMRSHDGCKKPIFISSGHRISLETAIDVVKRCCRHRVPEPVRQADMRSRERLR 317
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: UPI0010A52387 (endonuclease V n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A52387) HSP 1 Score: 155 bits (393), Expect = 1.070e-44 Identity = 75/130 (57.69%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 1 FPQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
+PQ++LVDGNGILH RGFGLA LGV+AD+PTIGIGKN H+DGL++ V A D + LVG SG++WG+A RST S KPIF+S GHR+S TA+T+ ++ C YRVPEP+RQAD+ SR+ +R
Sbjct: 132 YPQLLLVDGNGILHPRGFGLACHLGVVADLPTIGIGKNLHHVDGLNQSRVRQLLEAEENHAKDFITLVGGSGQIWGAAMRSTQGSIKPIFISIGHRISLRTAITIAQMTCKYRVPEPIRQADIRSRDYIR 261
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A7J7BWR6_TRIWF (Endonuclease V isoform X1 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7BWR6_TRIWF) HSP 1 Score: 154 bits (390), Expect = 4.870e-44 Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 1
Query: 1 FPQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
+PQ+++VDGNG+LH RGFGLA LGVL D+P IGIGKN H+DGL++ V+ + + L+G SGR WG A RST S+KPIFVS GHRVS TA+ + ++ C YRVPEP+RQAD++SRE +R
Sbjct: 143 YPQLLMVDGNGVLHPRGFGLACHLGVLTDLPAIGIGKNLHHVDGLTQSGVIQLLKAKESSGEEFVTLMGRSGRTWGVAMRSTKVSSKPIFVSIGHRVSLDTAINIVKMTCKYRVPEPIRQADIISREHIR 272
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: A0A8J4PRQ2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRQ2_9MYCE) HSP 1 Score: 153 bits (387), Expect = 7.940e-44 Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 4 PQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVR 390
PQVI+VDGNGILH R FGLAS LGVL D+PTIGIGK F H+DGL+ KDV + GD ++L GESG+VWG A +S ++S PI+VS GHR+S T++ + + YRVPEPVRQADL SRE +R
Sbjct: 122 PQVIIVDGNGILHPRSFGLASHLGVLIDIPTIGIGKTFFHVDGLNAKDVKKQVELSCHKGGDFIELKGESGKVWGLALQSNDDSKNPIYVSIGHRISLETSLEIIKTTTKYRVPEPVRQADLKSREFIR 250
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Match: UPI001BB1702E (endonuclease V-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1702E) HSP 1 Score: 154 bits (390), Expect = 1.350e-43 Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 4 PQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVVARAAGVLKGAGDAMDLVGESGRVWGSAFRSTNESTKPIFVSPGHRVSPATAVTLTRLLCNYRVPEPVRQADLVSREAVRE 393
PQ+I VDGNGI HQRGFG A LGVL+ +PT+GI K HID + K D AR +L+G G++ DL+GESG++WG A RS ++ PIFVS GHR+S TA L R C YR+PEPVRQAD+ SRE +R+
Sbjct: 124 PQIIFVDGNGIFHQRGFGTACHLGVLSGIPTVGIAKKLSHIDNIQKDDEHARKVSLLQG-GESFDLIGESGKIWGKALRSCEKTINPIFVSVGHRISLETATVLVRTCCQYRIPEPVRQADIRSREYLRQ 252 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10798.1065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10798.1065.1 >prot_S-firma_F_contig10798.1065.1 ID=prot_S-firma_F_contig10798.1065.1|Name=mRNA_S-firma_F_contig10798.1065.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=136bp FPQVILVDGNGILHQRGFGLASQLGVLADVPTIGIGKNFLHIDGLSKKDVback to top mRNA from alignment at S-firma_F_contig10798:2349..2756+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10798.1065.1 ID=mRNA_S-firma_F_contig10798.1065.1|Name=mRNA_S-firma_F_contig10798.1065.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=408bp|location=Sequence derived from alignment at S-firma_F_contig10798:2349..2756+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10798:2349..2756+ >mRNA_S-firma_F_contig10798.1065.1 ID=mRNA_S-firma_F_contig10798.1065.1|Name=mRNA_S-firma_F_contig10798.1065.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=816bp|location=Sequence derived from alignment at S-firma_F_contig10798:2349..2756+ (Sphaerotrichia firma ET2_F female)back to top |