mRNA_S-firma_F_contig10795.1062.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 897 bits (2317), Expect = 7.380e-313 Identity = 464/697 (66.57%), Postives = 545/697 (78.19%), Query Frame = 1
Query: 1 MEGRAPSSGGRVQAGGVAEPTT-EVSFSTL-CHPPTLL----QTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
M RAPSSGG VQAGG AEP T E SF L C TL Q L++V+RLLA++K W AF+Q G W N CPE V EAL WMAS VGLL +ASVGPLTP+C+AF LI+AAEGA E NL EL++WC+FL+ V +HGK+ D P+ +P+KDF +TT +LAKRAK + +RGKCTA LC+ RDGKQ+QDFD KLR IW DIQGV +LA ++ RA PPK MA+VP+ A LPPAFVER +L ++V K LVAT+RA + AHVLRG+PGGGKT+AA +VV CE VRRSFKDG+FWVQVGQVG+GNP ALL+ LA DL HAPS++P TVPHEF DVEH +SHL GV K+ NLRCL VLDDVWD +IVPLFL GFH LVTTRDLAV+PR L+G CT V+MLT EAL+LLKNASRAT++IP +EGLKVA DCGF+PL + I+GAMG SR +P S ETWRG+HA L +EP LVQD VG LAVSF L ARTRFRKLGVLA+G RAPVDMVAHLWE D D+TLL+ DLVDKSLVKV E +YYLHDLVLDFAKDELRKL+ RV+LVT RQAQYLG +SV++ YA AGEV+ GFYALMALW+SVEDLSGD QLE TYGA++K EESE + D+AY WA GRLF+LQGKFA+AE LY R QA+ E+ALGP+HP VAT+L RAGL+ K
Sbjct: 1 MAARAPSSGGSVQAGGTAEPVTAEYSFGGLHCSWTTLGIGSGQMLQEVERLLASRKPWPAFVQAGLQARYEW-NNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVG-VFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLMVK 695
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE) HSP 1 Score: 792 bits (2045), Expect = 2.520e-281 Identity = 399/476 (83.82%), Postives = 428/476 (89.92%), Query Frame = 1
Query: 115 LEDVQRLLAAKKQWTAFLQGGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQ 1542
LE+VQR L +K+W AFL G WANGCPEDV EAL WMASG VGLL VASVGPL PICEAFKGLIQAAEGAAEAD NLRELIAWCAFL T+VL +HGKE+DA APVM+PL+DF STTNQLAKRAK+LA+R KC A LC++RDGKQIQDFDAKLR IW DIQGV IL VSAE RAARPPK GEMAK+P AP LPPAFVERS LVE+VA+ L A ERA DTA VLRGIPGGGKTVAASSVV CE+VRRSFKDG+FWVQVGQVG+GNPTALLK LAEDL HAPSNRPRTVPHEFRDVEHV+SHLVGVL+QGNLRCL VLD+VWDRE+VPLFLRTGF CLVTTRD+A+VPRHL G CTPVDMLTE EAL+LLK ASRATSSIPRDEGL+VA DCGF+PLAI IIGAMG SRVNPHSPETWRGVHARLVEEP+LVQDHVGGALAVSFR L+EKAR RFRKLGVLARGVRAPVDMVAHLWEQ
Sbjct: 9 LEEVQRHLEGRKKWPAFLHGEWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFL-TDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQ 483
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 2.980e-139 Identity = 305/707 (43.14%), Postives = 404/707 (57.14%), Query Frame = 1
Query: 10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLPPA-FVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL--VEEPTLVQDHVGGALAV----SFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
RAP+SGG QAG A E PT ++ L+ V +LLA KK W AFL G W CP V+EAL WM + AVG+LGVASVGPL P+CEAFK LI+AAEGAAE L+ L++ CAFL T VL +HG+ + A V +P++DF TTN+LA A + A GKC AF C+ D + F+ LR+I DI V L + A L + PP +MA VP A +LP + +VER+ V+ VA L E + + + G+ GGGK+V AS+ V SVR F+ G+FWV+VG+ + ALL+ LA D+ AP++ P VPH +E V HL V G L VLDDVW+RE+V F+ GF L+TTRD +VV L + +TE EAL+LL+ S T P D+ KV CG +PL + I G+M + R + W + L V + + ++ V SF +L + + F K+ VLA G AP++M+ +LWE +DA T LV K L+ V Y +HDLVL+FAK +R V+ T+ QAQYLG + VLEGY G +G + L ALW+SVE LSGD +LEV +Y SL LE E T +A + W+ G LF +QGK+A+AEPLY R A+QEK LGP+HPDVATSL NRA LL +
Sbjct: 46 RAPASGG--QAGLAAAAVVE---------PTTVERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERA-AVQEVADGLTTPEESR-APYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--LPAGRLELGDMTEEEALELLRKTS-GTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 436 bits (1121), Expect = 4.200e-131 Identity = 297/700 (42.43%), Postives = 399/700 (57.00%), Query Frame = 1
Query: 10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLPPA-FVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL--VEEPTLVQDHVGGALAV----SFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLIN 2034
RAP+SG QAG A E PT ++ L+ V +LLA KK W AFL G W CP V+EAL WM + AVG+LGVASVGPL P+CEAFK LI+AAEGAAE L+ L++ CAFL T VL +HG+ + A V +P++DF +TTN+LA A + A GKC AF C+ D + F+ LR+I DI V L + A L + PP +MA VP A +LP + +VER+ V+ VA L A E + + + G+ GGGK+V AS+VV SVR F+ G+FWV+VG+ + ALL+ LA D+ AP++ P VP +E V HL V G + L VLDDVW+RE+V F+ GF L+TTRD +VV + + +TE EAL+LL+ S A P D+ KV CG +PL + I G+M + R + W + L V + + ++ V SF +L + + F K+ VLA G AP++M+ +LWE +DA T LV K L+ V Y +HDLVL+FAK +R V+ T+ QAQYLG + VLE Y G +G + L ALW+SVE LSGD LEV +Y ASL+ LE E T +A + + G LF +Q K+A+AEPLY R +A+QEK LGP+HP VATSL N
Sbjct: 29 RAPASGD--QAGLAAAAVVE---------PTTVERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERA-AVQEVADGLTAPEESR-APYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--VPAGRLELGDVTEEEALELLRKTSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 1.520e-126 Identity = 280/701 (39.94%), Postives = 381/701 (54.35%), Query Frame = 1
Query: 115 LEDVQRLLAAKKQWTAFLQ------GGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLP-PAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQ------DHVGGALAVSFRALNEKARTRFRKLGVLARGVR-----------------------------APVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
LE V +LLA K+ W AFL W CP +EAL W+A+ VG+L VASVGPL P+CEAFK LI+AAEGAAE+ L+ L++ CAFL T VL +HG+ + A V +P++DF TTN LA A + A+ GKC AF C+ D + DF+ LR+I DI V L + A L + PP +MA VP A +LP ++VER+ V+ VA L + E + + G+ GGGK+V AS+VV SVR F+ G+FWV+VG+ + ALL+ LA ++ A ++ P TVPH +E V HL V G L VLDDVW+RE+V F+ GF L+TTRD +VV + V +TE EAL+LL+ +S A P D+ KV CG +PL + I G+M + + + W+ + L ++ + L SF +L + + F KL VLA AP++M+ +LWE +DA T LV K L+ V Y +HDLVL++AK +R V+ VT+ QA +LG + VL+ Y G + + L ALW+SVE LSGD +LEV ALE E T +A + W+ G LF +QGK+A+AEPLY R QA+QE LGP+HPDV TSL NRA LL K
Sbjct: 16 LERVGKLLAEKRPWPAFLHIEARATEEW-EACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERA-AVQEVADGLTSPEDPR-APYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVV--VPAGRLEVGDMTEEEALELLRKSSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEV--------ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEK 701
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 3.930e-124 Identity = 284/688 (41.28%), Postives = 390/688 (56.69%), Query Frame = 1
Query: 70 VSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVS----AELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQ-GNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRD----EGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVH------ARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVV-EQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYAL----AGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
++ +T PT ++ LE V +LLA K+ W AFL G W CP +EAL WM + AVG+L VASVGPL P+C+A K LI+AAEGAAE + ++ L++ CAFL T VL +HG+ + A A V +P++DF TTN+LA A + A GKC AF C+ D + F+ LR I DI V L A L + RPP+ +MA VP A DLP +VER+ V+ VA L A E + + G+ GGGK+V AS+VV SVR F+ G+ WV+VG+ + LL+ LA ++ AP++ P VP +E V HL V+ G L VLDDVW+RE+V + GF L+TTRD +VV R + +TE EAL+LL+ S T P D + KV CG +PL + I G+M + + W + A+ + + L SF +L + + F ++ VLA G AP++M+ +LWE +DA T LV+K L+ V + Y +HD+VL+FAK +R V+ T+ QAQ+LG + VL+ Y AG+ RG + L +LW+SVE LSGD +LEV TY ASL+ LE + T D+A + A G LF Q K+ +AEPL+ R QAMQEK LGP+HP VA SL NRA LLR
Sbjct: 13 LAVATTAVEPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEW-EACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLAT-VLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPR-APYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTS-GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGD--RGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLLR 691
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 1.770e-121 Identity = 267/675 (39.56%), Postives = 367/675 (54.37%), Query Frame = 1
Query: 115 LEDVQRLLAAKKQWTAFLQ------GGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL-----AVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGG------------------ALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
LE+V+ LLA KK W AFL+ G W + CPE +AL WMAS AVGLL +ASVGPL P+C+AF LI+AA+GA E NLREL+ WCAFL+ V +HGK++D + +PL + STT +LAKRAK +A RGKCTA C+ +D K I FDAKLR++W DI+G+AIL + E R+ P PG MA VP A LPP+ V+R L + L AT+ + G+ W++VG+VG AL ++L A PR F E +I +L ++ + L L VLDDVW+R +V TG LVTTR +VV +RG T V + EA +LLK+ S A + +P+ E +VA CG+ L + I G++ + +P+S TWR RL E T ++ V G L +S +L F L VLARGV AP M+A +W++D V SL++ V+ S+ LHDL+LDF + K + + RQ+QYLG ++VL+ Y G+ L GFY+L+ LW+ + +L G +QLEV Y ASL L + + +T + A A GRL +L+G FA+A+P R + EK LGP+HPD+A L NRA LLR
Sbjct: 62 LEEVETLLANKKPWPAFLRAAVETRGEW-DDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVG-VFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPG-MADVPAAALKLPPSHVKRVGLEAEIVNSLTATDAS----------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAKLPPR-----FNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVA--MRGGRTTVGNMDGGEARELLKSRSGAIA-LPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWR----RLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRCEK--KIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCG-KQLEVEVYHASLGKLGD-DVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 363 bits (932), Expect = 2.420e-105 Identity = 271/703 (38.55%), Postives = 352/703 (50.07%), Query Frame = 1
Query: 10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILA----VSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSI--PRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL---------VEEPTLVQDHVGGALAVSFRALNEKARTRFRKL--GVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLL 2049
RAP+SGG QAG VA PT + L+ V +LLA KK W AFL G W CP V+EAL WMA VG+L +ASVGPL P+C+AFKGLI+AAEGAAE+ L+ LI+ CAFL T VL +H + + A V +P+KDF +TTN LA A A GKC A C+ D + DF+ LR I DI V L + A R RPP MA VP L + R L+ +L T D VL G+ G GK+V AS+VV E VR F GMFWV+ L + E ++ T VE V +L V L VLDDVW+REIV TG LVTTRD +VV + G C V + E EAL++L+ A+ ++ PR E L+ P P++WR +H L + V V L VS A+ + + R L VLA G AP DM+ LW++ T LVD+S+++ ++ +HDLVL F K +L+ R + TSR A+YLG + VL Y GE G YALMALW+SVEDL G+ ++ Y +L+ + E P AGR+ +L GK+A+A+PLY R + E LGPDHP +AT L NRAGLL
Sbjct: 3 RAPTSGG--QAGLVA-----------AVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTT-VLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTA-VGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDAKDQ-----LHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVS--MPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGP----------------------PQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNR-PIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPEHAPWRQ-------AGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 326 bits (836), Expect = 2.680e-97 Identity = 256/709 (36.11%), Postives = 355/709 (50.07%), Query Frame = 1
Query: 1 MEGRAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFL------QGGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDE--------GLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKA---RTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKL--------QGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
M RAPS VQAG A PTT + LE+V+ LLA KK W AFL G W N CPE +AL WMAS AVGLL +ASVGPLTP+C+AF LI+AA+GA E NLREL+ WCAFL+ VL +HGK+++ V +PL +F +TT +LAKRA +A RGK E R+ P P +MA VP A LPP+ V+R L + K L T+ A+ +VL G+ G GK++ ASSVV E VR+ F+ G FW++VG G AL LA + A +P +F +E +I HL V+ + L L VLDDV +R +V TG LVTTR ++V +RG T V + EA +LLK+ S A +P E G ++ D G P + + +S + G H Q + +L V R ++ A + + +G+ ++ V ++ ++ +D V SL++ V+ S+ +HDL+LDFA+ K + RQ+QYL ++VL+ Y G+ L G Y+L+ LW+ + + G++Q+EV Y ASL L + E + A A A GRL L QGK +A PLY R + E ALGP+H VAT+L NRA LLR
Sbjct: 1 MAARAPSDVSSVQAGAAAAPTTP-------------ERLEEVETLLAYKKPWPAFLCAGVDVHGEWDN-CPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVG-VLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGKM-------------------------------------EERSRPLPLP-DMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATK-----LPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVA--VRGGRTVVGNMDRAEARELLKSKSGAIE-LPETEADQTKTILGPQMDADIGDNPTKESLFHVLDLSL-------KYLGRH----------QHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADF------FVSNSLLQEVDGSFRVHDLLLDFARTRCEK--EILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDE-SAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLLR 621
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 319 bits (817), Expect = 7.530e-96 Identity = 197/451 (43.68%), Postives = 256/451 (56.76%), Query Frame = 1
Query: 796 GGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDH-----VGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLR-RRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQ-----------------------------GKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAG 2043
GGG+TV S+VV SV F+ G+F + VG+ LL+ LA ++ AP++ P P + +EHV+ HL V+ G L VLDDV +RE+V L G +VTTRD +VV + G C V +TE EAL+LL AS A SS D +PLA+ +IGAM SR +PH P+TW +H +L +P V + +G L +SF AL+ A+ RFR+LGVLA G AP++M+++LW+Q ++ L +G LVDKSLV+ VE Y LHDLVL F K +L L+ RV LVTSR AQYL +SVL+ YA A E+ G +ALM LW SVE+LS D L+ YG L LE E T D A + A G LF LQ GK+A AEPL R A++EK LGP+HPDVA SL NRAG
Sbjct: 3 GGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVG--VPGGCLEVGDMTEEEALELLMLASGAVSSRIAD-----------LPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSALDADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELSRDNTLQTTMYGKILSELEACEATADTAISYGAVGNLFFLQVRATRNFLLVSSVSSSRAVPSQTPLLAVRGKYADAEPLCERSPAIREKVLGPEHPDVAQSLNNRAG 440 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10795.1062.1 >prot_S-firma_F_contig10795.1062.1 ID=prot_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=725bp MEGRAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKback to top mRNA from alignment at S-firma_F_contig10795:2035..5025+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10795.1062.1 ID=mRNA_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2991bp|location=Sequence derived from alignment at S-firma_F_contig10795:2035..5025+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10795:2035..5025+ >mRNA_S-firma_F_contig10795.1062.1 ID=mRNA_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4350bp|location=Sequence derived from alignment at S-firma_F_contig10795:2035..5025+ (Sphaerotrichia firma ET2_F female)back to top |