mRNA_S-firma_F_contig10795.1062.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10795.1062.1
Unique NamemRNA_S-firma_F_contig10795.1062.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 897 bits (2317), Expect = 7.380e-313
Identity = 464/697 (66.57%), Postives = 545/697 (78.19%), Query Frame = 1
Query:    1 MEGRAPSSGGRVQAGGVAEPTT-EVSFSTL-CHPPTLL----QTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
            M  RAPSSGG VQAGG AEP T E SF  L C   TL     Q L++V+RLLA++K W AF+Q G      W N CPE V EAL WMAS  VGLL +ASVGPLTP+C+AF  LI+AAEGA E   NL EL++WC+FL+  V  +HGK+ D   P+ +P+KDF +TT +LAKRAK + +RGKCTA LC+ RDGKQ+QDFD KLR IW DIQGV +LA  ++ RA  PPK   MA+VP+ A  LPPAFVER +L ++V K LVAT+RA + AHVLRG+PGGGKT+AA +VV CE VRRSFKDG+FWVQVGQVG+GNP ALL+ LA DL HAPS++P TVPHEF DVEH +SHL GV K+ NLRCL VLDDVWD +IVPLFL  GFH LVTTRDLAV+PR L+G CT V+MLT  EAL+LLKNASRAT++IP +EGLKVA DCGF+PL + I+GAMG SR +P S ETWRG+HA L +EP LVQD VG  LAVSF  L   ARTRFRKLGVLA+G RAPVDMVAHLWE D  D+TLL+ DLVDKSLVKV E +YYLHDLVLDFAKDELRKL+ RV+LVT RQAQYLG +SV++ YA AGEV+ GFYALMALW+SVEDLSGD QLE  TYGA++K  EESE + D+AY  WA GRLF+LQGKFA+AE LY R QA+ E+ALGP+HP VAT+L  RAGL+ K
Sbjct:    1 MAARAPSSGGSVQAGGTAEPVTAEYSFGGLHCSWTTLGIGSGQMLQEVERLLASRKPWPAFVQAGLQARYEW-NNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVG-VFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLMVK 695          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 792 bits (2045), Expect = 2.520e-281
Identity = 399/476 (83.82%), Postives = 428/476 (89.92%), Query Frame = 1
Query:  115 LEDVQRLLAAKKQWTAFLQGGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQ 1542
            LE+VQR L  +K+W AFL G WANGCPEDV EAL WMASG VGLL VASVGPL PICEAFKGLIQAAEGAAEAD NLRELIAWCAFL T+VL +HGKE+DA APVM+PL+DF STTNQLAKRAK+LA+R KC A LC++RDGKQIQDFDAKLR IW DIQGV IL VSAE RAARPPK GEMAK+P  AP LPPAFVERS LVE+VA+ L A ERA DTA VLRGIPGGGKTVAASSVV CE+VRRSFKDG+FWVQVGQVG+GNPTALLK LAEDL HAPSNRPRTVPHEFRDVEHV+SHLVGVL+QGNLRCL VLD+VWDRE+VPLFLRTGF CLVTTRD+A+VPRHL G CTPVDMLTE EAL+LLK ASRATSSIPRDEGL+VA DCGF+PLAI IIGAMG SRVNPHSPETWRGVHARLVEEP+LVQDHVGGALAVSFR L+EKAR RFRKLGVLARGVRAPVDMVAHLWEQ
Sbjct:    9 LEEVQRHLEGRKKWPAFLHGEWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFL-TDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQ 483          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 2.980e-139
Identity = 305/707 (43.14%), Postives = 404/707 (57.14%), Query Frame = 1
Query:   10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLPPA-FVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL--VEEPTLVQDHVGGALAV----SFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
            RAP+SGG  QAG  A    E         PT ++ L+ V +LLA KK W AFL  G      W   CP  V+EAL WM + AVG+LGVASVGPL P+CEAFK LI+AAEGAAE    L+ L++ CAFL T VL +HG+ +   A V +P++DF  TTN+LA  A + A  GKC AF C+  D   +  F+  LR+I  DI  V  L    +  A L +  PP   +MA VP  A +LP + +VER+  V+ VA  L   E +    + + G+ GGGK+V AS+ V   SVR  F+ G+FWV+VG+    +  ALL+ LA D+  AP++ P  VPH    +E V  HL  V   G    L VLDDVW+RE+V  F+  GF  L+TTRD +VV   L      +  +TE EAL+LL+  S  T   P D+      KV   CG +PL + I G+M + R    +   W  +   L  V +    +     ++ V    SF +L  + +  F K+ VLA G  AP++M+ +LWE +DA  T      LV K L+  V    Y +HDLVL+FAK  +R     V+  T+ QAQYLG + VLEGY     G   +G + L ALW+SVE LSGD +LEV +Y  SL  LE  E T  +A + W+ G LF +QGK+A+AEPLY R  A+QEK LGP+HPDVATSL NRA LL +
Sbjct:   46 RAPASGG--QAGLAAAAVVE---------PTTVERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERA-AVQEVADGLTTPEESR-APYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--LPAGRLELGDMTEEEALELLRKTS-GTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 4.200e-131
Identity = 297/700 (42.43%), Postives = 399/700 (57.00%), Query Frame = 1
Query:   10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLPPA-FVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL--VEEPTLVQDHVGGALAV----SFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLIN 2034
            RAP+SG   QAG  A    E         PT ++ L+ V +LLA KK W AFL  G      W   CP  V+EAL WM + AVG+LGVASVGPL P+CEAFK LI+AAEGAAE    L+ L++ CAFL T VL +HG+ +   A V +P++DF +TTN+LA  A + A  GKC AF C+  D   +  F+  LR+I  DI  V  L    +  A L +  PP   +MA VP  A +LP + +VER+  V+ VA  L A E +    + + G+ GGGK+V AS+VV   SVR  F+ G+FWV+VG+    +  ALL+ LA D+  AP++ P  VP     +E V  HL  V   G  + L VLDDVW+RE+V  F+  GF  L+TTRD +VV   +      +  +TE EAL+LL+  S A    P D+      KV   CG +PL + I G+M + R    +   W  +   L  V +    +     ++ V    SF +L  + +  F K+ VLA G  AP++M+ +LWE +DA  T      LV K L+  V    Y +HDLVL+FAK  +R     V+  T+ QAQYLG + VLE Y     G   +G + L ALW+SVE LSGD  LEV +Y ASL+ LE  E T  +A +  + G LF +Q K+A+AEPLY R +A+QEK LGP+HP VATSL N
Sbjct:   29 RAPASGD--QAGLAAAAVVE---------PTTVERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERA-AVQEVADGLTAPEESR-APYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--VPAGRLELGDVTEEEALELLRKTSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 1.520e-126
Identity = 280/701 (39.94%), Postives = 381/701 (54.35%), Query Frame = 1
Query:  115 LEDVQRLLAAKKQWTAFLQ------GGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL----AVSAELRAARPPKPGEMAKVPEKAPDLP-PAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEG----LKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQ------DHVGGALAVSFRALNEKARTRFRKLGVLARGVR-----------------------------APVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALA--GEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRK 2055
            LE V +LLA K+ W AFL         W   CP   +EAL W+A+  VG+L VASVGPL P+CEAFK LI+AAEGAAE+   L+ L++ CAFL T VL +HG+ +   A V +P++DF  TTN LA  A + A+ GKC AF C+  D   + DF+  LR+I  DI  V  L    +  A L +  PP   +MA VP  A +LP  ++VER+  V+ VA  L + E      + + G+ GGGK+V AS+VV   SVR  F+ G+FWV+VG+    +  ALL+ LA ++  A ++ P TVPH    +E V  HL  V   G    L VLDDVW+RE+V  F+  GF  L+TTRD +VV   +      V  +TE EAL+LL+ +S A    P D+      KV   CG +PL + I G+M + +    +   W+ +   L      ++        +   L  SF +L  + +  F KL VLA                                 AP++M+ +LWE +DA  T      LV K L+  V    Y +HDLVL++AK  +R     V+ VT+ QA +LG + VL+ Y     G   +  + L ALW+SVE LSGD +LEV        ALE  E T  +A + W+ G LF +QGK+A+AEPLY R QA+QE  LGP+HPDV TSL NRA LL K
Sbjct:   16 LERVGKLLAEKRPWPAFLHIEARATEEW-EACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLAT-VLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERA-AVQEVADGLTSPEDPR-APYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVV--VPAGRLEVGDMTEEEALELLRKSSGAVGQ-PGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEV--------ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEK 701          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 3.930e-124
Identity = 284/688 (41.28%), Postives = 390/688 (56.69%), Query Frame = 1
Query:   70 VSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVS----AELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQ-GNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRD----EGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVH------ARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWE-QDASDTTLLMGDLVDKSLVKVV-EQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYAL----AGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
            ++ +T    PT ++ LE V +LLA K+ W AFL  G      W   CP   +EAL WM + AVG+L VASVGPL P+C+A K LI+AAEGAAE +  ++ L++ CAFL T VL +HG+ + A A V +P++DF  TTN+LA  A + A  GKC AF C+  D   +  F+  LR I  DI  V  L       A L + RPP+  +MA VP  A DLP  +VER+  V+ VA  L A E      + + G+ GGGK+V AS+VV   SVR  F+ G+ WV+VG+    +   LL+ LA ++  AP++ P  VP     +E V  HL  V+   G    L VLDDVW+RE+V   +  GF  L+TTRD +VV    R     +  +TE EAL+LL+  S  T   P D    +  KV   CG +PL + I G+M   +    +   W  +       A+ +         +   L  SF +L  + +  F ++ VLA G  AP++M+ +LWE +DA  T      LV+K L+  V +  Y +HD+VL+FAK  +R     V+  T+ QAQ+LG + VL+ Y      AG+  RG + L +LW+SVE LSGD +LEV TY ASL+ LE  + T D+A +  A G LF  Q K+ +AEPL+ R QAMQEK LGP+HP VA SL NRA LLR
Sbjct:   13 LAVATTAVEPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEW-EACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLAT-VLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPR-APYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTS-GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGD--RGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLLR 691          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 1.770e-121
Identity = 267/675 (39.56%), Postives = 367/675 (54.37%), Query Frame = 1
Query:  115 LEDVQRLLAAKKQWTAFLQ------GGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAIL-----AVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGG------------------ALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
            LE+V+ LLA KK W AFL+      G W + CPE   +AL WMAS AVGLL +ASVGPL P+C+AF  LI+AA+GA E   NLREL+ WCAFL+  V  +HGK++D    + +PL +  STT +LAKRAK +A RGKCTA  C+ +D K I  FDAKLR++W DI+G+AIL      +  E R+   P PG MA VP  A  LPP+ V+R  L   +   L AT+ +                                  G+ W++VG+VG     AL ++L      A    PR     F   E +I +L  ++ +  L  L VLDDVW+R +V     TG   LVTTR  +VV   +RG  T V  +   EA +LLK+ S A + +P+ E  +VA  CG+  L + I G++   + +P+S  TWR    RL  E T  ++ V G                   L +S  +L       F  L VLARGV AP  M+A +W++D           V  SL++ V+ S+ LHDL+LDF +    K  + +     RQ+QYLG ++VL+ Y   G+ L GFY+L+ LW+ + +L G +QLEV  Y ASL  L + + +T  + A  A GRL +L+G FA+A+P   R   + EK LGP+HPD+A  L NRA LLR
Sbjct:   62 LEEVETLLANKKPWPAFLRAAVETRGEW-DDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVG-VFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPG-MADVPAAALKLPPSHVKRVGLEAEIVNSLTATDAS----------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAKLPPR-----FNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVA--MRGGRTTVGNMDGGEARELLKSRSGAIA-LPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWR----RLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRCEK--KIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCG-KQLEVEVYHASLGKLGD-DVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 2.420e-105
Identity = 271/703 (38.55%), Postives = 352/703 (50.07%), Query Frame = 1
Query:   10 RAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFLQGG------WANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILA----VSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSI--PRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARL---------VEEPTLVQDHVGGALAVSFRALNEKARTRFRKL--GVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLL 2049
            RAP+SGG  QAG VA              PT  + L+ V +LLA KK W AFL  G      W   CP  V+EAL WMA   VG+L +ASVGPL P+C+AFKGLI+AAEGAAE+   L+ LI+ CAFL T VL +H + +   A V +P+KDF +TTN LA  A   A  GKC A  C+  D   + DF+  LR I  DI  V  L     + A  R  RPP    MA VP     L    + R  L+     +L  T    D   VL G+ G GK+V AS+VV  E VR  F  GMFWV+            L +  E      ++   T       VE V  +L  V        L VLDDVW+REIV     TG   LVTTRD +VV   + G C  V  + E EAL++L+    A+ ++  PR E L+                        P  P++WR +H  L          +    V   V   L VS  A+ +    + R L   VLA G  AP DM+  LW++    T      LVD+S+++    ++ +HDLVL F K +L+    R  + TSR A+YLG + VL  Y   GE   G YALMALW+SVEDL G+ ++    Y  +L+ + E  P          AGR+ +L GK+A+A+PLY R   + E  LGPDHP +AT L NRAGLL
Sbjct:    3 RAPTSGG--QAGLVA-----------AVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEW-EACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTT-VLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTA-VGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDAKDQ-----LHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVS--MPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGP----------------------PQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNR-PIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPEHAPWRQ-------AGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 2.680e-97
Identity = 256/709 (36.11%), Postives = 355/709 (50.07%), Query Frame = 1
Query:    1 MEGRAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKKQWTAFL------QGGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKGLIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDFESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGVAILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVATERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDE--------GLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKA---RTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKL--------QGKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAGLLR 2052
            M  RAPS    VQAG  A PTT              + LE+V+ LLA KK W AFL       G W N CPE   +AL WMAS AVGLL +ASVGPLTP+C+AF  LI+AA+GA E   NLREL+ WCAFL+  VL +HGK+++    V +PL +F +TT +LAKRA  +A RGK                                      E R+   P P +MA VP  A  LPP+ V+R  L   + K L  T+ A+   +VL G+ G GK++ ASSVV  E VR+ F+ G FW++VG  G     AL   LA  +  A       +P +F  +E +I HL  V+ +  L  L VLDDV +R +V     TG   LVTTR  ++V   +RG  T V  +   EA +LLK+ S A   +P  E        G ++  D G  P    +   + +S         + G H          Q  +  +L V  R ++  A    + +  +G+        ++ V ++  ++ +D        V  SL++ V+ S+ +HDL+LDFA+    K    +     RQ+QYL  ++VL+ Y   G+ L G Y+L+ LW+ + +  G++Q+EV  Y ASL  L + E +   A A  A GRL  L        QGK  +A PLY R   + E ALGP+H  VAT+L NRA LLR
Sbjct:    1 MAARAPSDVSSVQAGAAAAPTTP-------------ERLEEVETLLAYKKPWPAFLCAGVDVHGEWDN-CPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVG-VLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGKM-------------------------------------EERSRPLPLP-DMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATK-----LPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVA--VRGGRTVVGNMDRAEARELLKSKSGAIE-LPETEADQTKTILGPQMDADIGDNPTKESLFHVLDLSL-------KYLGRH----------QHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADF------FVSNSLLQEVDGSFRVHDLLLDFARTRCEK--EILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDE-SAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLLR 621          
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 7.530e-96
Identity = 197/451 (43.68%), Postives = 256/451 (56.76%), Query Frame = 1
Query:  796 GGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGSGNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRCLAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTETEALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHSPETWRGVHARLVEEPTLVQDH-----VGGALAVSFRALNEKARTRFRKLGVLARGVRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLR-RRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSVEDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQ-----------------------------GKFAQAEPLYGRPQAMQEKALGPDHPDVATSLINRAG 2043
            GGG+TV  S+VV   SV   F+ G+F + VG+        LL+ LA ++  AP++ P   P +   +EHV+ HL  V+  G    L VLDDV +RE+V   L  G   +VTTRD +VV   + G C  V  +TE EAL+LL  AS A SS   D           +PLA+ +IGAM  SR +PH P+TW  +H +L  +P  V +      +G  L +SF AL+  A+ RFR+LGVLA G  AP++M+++LW+Q   ++ L +G LVDKSLV+ VE  Y LHDLVL F K +L  L+  RV LVTSR AQYL  +SVL+ YA A E+  G +ALM LW SVE+LS D  L+   YG  L  LE  E T D A +  A G LF LQ                             GK+A AEPL  R  A++EK LGP+HPDVA SL NRAG
Sbjct:    3 GGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVG--VPGGCLEVGDMTEEEALELLMLASGAVSSRIAD-----------LPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSALDADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELSRDNTLQTTMYGKILSELEACEATADTAISYGAVGNLFFLQVRATRNFLLVSSVSSSRAVPSQTPLLAVRGKYADAEPLCERSPAIREKVLGPEHPDVAQSLNNRAG 440          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10795.1062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL58_ECTSI7.380e-31366.57NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L982_9PHAE2.520e-28183.82NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI2.980e-13943.14NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI4.200e-13142.43NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.520e-12639.94NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI3.930e-12441.28NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JJK0_9PHAE1.770e-12139.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6W2_ECTSI2.420e-10538.55NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5J6Q8_9PHAE2.680e-9736.11NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLW6_9PHAE7.530e-9643.68NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10795contigS-firma_F_contig10795:2035..5025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LL58
PFAMsNB-ARC,TPR_10,TPR_12,TPR_16,TPR_4,TPR_7,TPR_8
Max annot lvl2759|Eukaryota
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Evalue2.01e-314
EggNOG OGsCOG0457@1|root,KOG4658@1|root,KOG1840@2759|Eukaryota,KOG4658@2759|Eukaryota
DescriptionADP binding
COG categoryS
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size2321
Cds size2175
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.464665-CDS-S-firma_F_contig10795:2034..21251622815621.464665-CDS-S-firma_F_contig10795:2034..2125Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 2035..2125 +
1696949459.6127605-CDS-S-firma_F_contig10795:2034..21251696949459.6127605-CDS-S-firma_F_contig10795:2034..2125Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 2035..2125 +
1622815621.4793544-CDS-S-firma_F_contig10795:2212..33901622815621.4793544-CDS-S-firma_F_contig10795:2212..3390Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 2213..3390 +
1696949459.6301467-CDS-S-firma_F_contig10795:2212..33901696949459.6301467-CDS-S-firma_F_contig10795:2212..3390Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 2213..3390 +
1622815621.497076-CDS-S-firma_F_contig10795:3558..38311622815621.497076-CDS-S-firma_F_contig10795:3558..3831Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 3559..3831 +
1696949459.6413443-CDS-S-firma_F_contig10795:3558..38311696949459.6413443-CDS-S-firma_F_contig10795:3558..3831Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 3559..3831 +
1622815621.5209439-CDS-S-firma_F_contig10795:3917..43071622815621.5209439-CDS-S-firma_F_contig10795:3917..4307Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 3918..4307 +
1696949459.6580443-CDS-S-firma_F_contig10795:3917..43071696949459.6580443-CDS-S-firma_F_contig10795:3917..4307Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 3918..4307 +
1622815621.5365999-CDS-S-firma_F_contig10795:4483..47261622815621.5365999-CDS-S-firma_F_contig10795:4483..4726Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 4484..4726 +
1696949459.6685247-CDS-S-firma_F_contig10795:4483..47261696949459.6685247-CDS-S-firma_F_contig10795:4483..4726Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10795 4484..4726 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.5510256-UTR-S-firma_F_contig10795:4726..48031622815621.5510256-UTR-S-firma_F_contig10795:4726..4803Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10795 4727..4803 +
1696949459.681517-UTR-S-firma_F_contig10795:4726..48031696949459.681517-UTR-S-firma_F_contig10795:4726..4803Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10795 4727..4803 +
1622815621.563795-UTR-S-firma_F_contig10795:4956..50251622815621.563795-UTR-S-firma_F_contig10795:4956..5025Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10795 4957..5025 +
1696949459.6912074-UTR-S-firma_F_contig10795:4956..50251696949459.6912074-UTR-S-firma_F_contig10795:4956..5025Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10795 4957..5025 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10795.1062.1prot_S-firma_F_contig10795.1062.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10795 2035..4726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10795.1062.1

>prot_S-firma_F_contig10795.1062.1 ID=prot_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=725bp
MEGRAPSSGGRVQAGGVAEPTTEVSFSTLCHPPTLLQTLEDVQRLLAAKK
QWTAFLQGGWANGCPEDVEEALRWMASGAVGLLGVASVGPLTPICEAFKG
LIQAAEGAAEADANLRELIAWCAFLLTEVLRKHGKELDASAPVMQPLKDF
ESTTNQLAKRAKKLASRGKCTAFLCYSRDGKQIQDFDAKLRKIWGDIQGV
AILAVSAELRAARPPKPGEMAKVPEKAPDLPPAFVERSELVESVAKHLVA
TERAADTAHVLRGIPGGGKTVAASSVVHCESVRRSFKDGMFWVQVGQVGS
GNPTALLKSLAEDLEHAPSNRPRTVPHEFRDVEHVISHLVGVLKQGNLRC
LAVLDDVWDREIVPLFLRTGFHCLVTTRDLAVVPRHLRGACTPVDMLTET
EALQLLKNASRATSSIPRDEGLKVAGDCGFVPLAIGIIGAMGISRVNPHS
PETWRGVHARLVEEPTLVQDHVGGALAVSFRALNEKARTRFRKLGVLARG
VRAPVDMVAHLWEQDASDTTLLMGDLVDKSLVKVVEQSYYLHDLVLDFAK
DELRKLRRRVQLVTSRQAQYLGTISVLEGYALAGEVLRGFYALMALWKSV
EDLSGDQQLEVGTYGASLKALEESEPTTDIAYANWAAGRLFKLQGKFAQA
EPLYGRPQAMQEKALGPDHPDVATSLINRAGLLRKCSSAIFSPTITMKYD
STTLFTTSRANMQRLSHCMSGARR*
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mRNA from alignment at S-firma_F_contig10795:2035..5025+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10795.1062.1 ID=mRNA_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2991bp|location=Sequence derived from alignment at S-firma_F_contig10795:2035..5025+ (Sphaerotrichia firma ET2_F female)
ATGGAAGGACGAGCTCCCTCTAGCGGTGGCAGAGTTCAAGCGGGAGGAGT GGCAGAGCCCACCACAGAGGTAAGCTTTTCTACCTTGTGTCGTTTGGTTC GACCTACGTACTCCTTTTTTCGAGCTTGACTCTGCCGCCGTGGGCGGTGC CTATTGTGCGAAGCCTGACGCCTGAGAGACCCTCCTACTTTATTACAGAC GCTTGAGGACGTCCAGCGGCTTCTCGCGGCCAAGAAGCAATGGACTGCGT TTCTTCAAGGTGGGTGGGCGAACGGTTGCCCAGAAGACGTCGAGGAAGCG TTGCGGTGGATGGCATCAGGGGCCGTGGGACTCTTGGGTGTCGCAAGCGT GGGGCCTCTCACGCCCATCTGCGAGGCCTTCAAGGGGCTGATCCAGGCGG CGGAGGGTGCGGCGGAGGCAGACGCGAACCTGAGGGAACTGATCGCCTGG TGTGCCTTCCTGTTGACCGAAGTCTTGCGCAAGCACGGAAAGGAGTTGGA CGCTTCCGCGCCCGTCATGCAACCCCTCAAGGACTTTGAATCCACCACAA ACCAACTAGCGAAGCGTGCGAAAAAGCTGGCGTCGAGAGGGAAGTGCACG GCGTTTCTCTGCTACTCGAGGGACGGGAAACAGATCCAAGACTTCGACGC GAAGCTCCGCAAAATCTGGGGAGATATCCAAGGGGTGGCGATCTTGGCAG TTTCCGCGGAGTTGCGAGCTGCTCGTCCTCCGAAACCCGGCGAGATGGCC AAGGTACCCGAGAAAGCTCCAGATCTACCGCCGGCGTTTGTAGAGCGAAG CGAACTTGTCGAATCTGTAGCCAAACACCTCGTGGCGACGGAGCGGGCGG CCGATACAGCACACGTTCTCCGTGGCATCCCCGGGGGGGGCAAGACAGTC GCCGCCAGTTCAGTAGTGCACTGTGAGAGCGTGCGCCGGAGCTTCAAGGA CGGGATGTTCTGGGTGCAAGTAGGACAAGTTGGTTCGGGGAATCCGACCG CCCTGTTGAAGAGCTTGGCGGAAGATCTTGAGCATGCGCCCTCAAATCGA CCACGCACGGTCCCGCACGAGTTCAGGGACGTCGAGCACGTCATCAGCCA TCTGGTGGGCGTTCTCAAGCAGGGTAATCTGCGATGTCTCGCGGTGCTGG ATGATGTATGGGACCGTGAGATAGTCCCGCTGTTCCTGCGTACAGGGTTT CACTGCTTGGTGACGACACGCGATCTAGCAGTGGTACCTCGCCACCTGCG GGGAGCGTGCACGCCGGTGGATATGCTGACGGAAACCGAGGCACTGCAGC TCCTGAAGAATGCGAGTCGGGCAACTTCAAGTATTCCGAGGGACGAGGGC CTGAAGGTGGGATATTTTACTGACACGATTCTCCTGCACATCTTCACGGT ACACTAATACTTCGAAGTACGGAGTACTTAGCAGTGTATGACTTCGCGGT CTAGACCCTTGAACCGCAAGCTGCAACGAGTTGATCATTTTCTGCATCGC GTCACTTGTGTGGTGTCCTCCAAGGTTGCCGGTGACTGCGGCTTTGTCCC GCTTGCCATCGGCATCATCGGTGCCATGGGTATCTCGCGAGTGAACCCGC ACTCCCCCGAAACATGGCGGGGTGTGCACGCGCGGCTAGTCGAAGAACCA ACCCTGGTGCAAGACCATGTTGGAGGTGCCCTCGCCGTCAGCTTTCGTGC GCTCAACGAGAAGGCCAGGACGCGGTTCCGCAAGCTTGGTGTTCTGGCGC GGGGGGTACGTGCCCCGGTCGACATGGTGGCTCATCTCTGGGAACAGGTA GGTGCACGTCATGCGGGAAGTGTTTCTCCCCGATTCAGCGACACTCTCCT TGACGTGTCCGTTGTCCCCAATTGTACATACAGGACGCTAGCGACACAAC GTTGTTGATGGGCGACCTGGTTGACAAGTCCCTCGTGAAGGTCGTGGAGC AGAGCTACTACCTGCACGACCTGGTGCTCGATTTTGCGAAGGACGAGCTA AGGAAGCTGCGGAGGCGGGTGCAGCTTGTCACGTCTCGCCAAGCGCAGTA CCTGGGCACGATATCCGTGCTCGAGGGATACGCACTGGCCGGTGAGGTGT TGCGGGGCTTCTACGCCCTCATGGCTCTGTGGAAGTCCGTGGAAGACCTG TCTGGCGACCAGCAGCTGGAGGTAGGCACGTACGGGGCCAGCCTGAAGGC ATTGGAGGAGAGCGAACCAACAACAGATATAGCCTATGCGAACTGGGCTG CGGGGAGGTTGTTCAAACTCCAGGTGGGCTATCGGCGAGTCTGTGTGGTT GTAACGAATCAAACAGCCTAGCTCAACTTTGTCTGAAGCATTGTCAGGTA GCTGGGGTTCATGGAGAGTCAGGGTAGTACATGGATCGGTTATGTTTCGC ATCTCGGTGGATCGCTGTTTTACATTGACCCAATGCTTGTTCAACACAGG GCAAGTTTGCTCAGGCAGAGCCACTGTACGGGCGGCCACAGGCCATGCAA GAGAAAGCGCTTGGTCCGGACCATCCGGATGTGGCGACATCGCTCATCAA CCGGGCGGGGTTGTTGAGAAAATGTTCCTCCGCAATTTTTTCTCCGACAA TCACAATGAAATACGACTCTACCACTCTCTTTACTACATCCAGGGCAAAT ATGCAGAGGCTGAGCCACTGTATGAGCGGTGCCAGGCGATAGAGGAGAAG ATTCTGGGCCCTGAGCACCCACGTGTGGCCACAACGCTCAACAACCGGGC GGGGTTGTTGAAGGCACAGGTGAGAGCCAACCAATGCTTCTAGAGGAATC TAGAAGAATATATGGTCCGCAGTTCTAGATCCGACGACATTTCGTTGGGT CCATATTTGTCGGGTGAACATTTTGTTCTTGGGGAACCGCGCTCTCATCA CAACCCGCTGCTTGGCATGCAGGGCAAATTCGCTGAGGCGGAGCCACTCT ATGAGCGGTGCCAGGCGATAGAGGAGAAGATTCTGGGCCCT
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Coding sequence (CDS) from alignment at S-firma_F_contig10795:2035..5025+

>mRNA_S-firma_F_contig10795.1062.1 ID=mRNA_S-firma_F_contig10795.1062.1|Name=mRNA_S-firma_F_contig10795.1062.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4350bp|location=Sequence derived from alignment at S-firma_F_contig10795:2035..5025+ (Sphaerotrichia firma ET2_F female)
ATGGAAGGACGAGCTCCCTCTAGCGGTGGCAGAGTTCAAGCGGGAGGAGT
GGCAGAGCCCACCACAGAGGTAAGCTTTTCTACCTTGTGTCATGGAAGGA
CGAGCTCCCTCTAGCGGTGGCAGAGTTCAAGCGGGAGGAGTGGCAGAGCC
CACCACAGAGGTAAGCTTTTCTACCTTGTGTCACCCTCCTACTTTATTAC
AGACGCTTGAGGACGTCCAGCGGCTTCTCGCGGCCAAGAAGCAATGGACT
GCGTTTCTTCAAGGTGGGTGGGCGAACGGTTGCCCAGAAGACGTCGAGGA
AGCGTTGCGGTGGATGGCATCAGGGGCCGTGGGACTCTTGGGTGTCGCAA
GCGTGGGGCCTCTCACGCCCATCTGCGAGGCCTTCAAGGGGCTGATCCAG
GCGGCGGAGGGTGCGGCGGAGGCAGACGCGAACCTGAGGGAACTGATCGC
CTGGTGTGCCTTCCTGTTGACCGAAGTCTTGCGCAAGCACGGAAAGGAGT
TGGACGCTTCCGCGCCCGTCATGCAACCCCTCAAGGACTTTGAATCCACC
ACAAACCAACTAGCGAAGCGTGCGAAAAAGCTGGCGTCGAGAGGGAAGTG
CACGGCGTTTCTCTGCTACTCGAGGGACGGGAAACAGATCCAAGACTTCG
ACGCGAAGCTCCGCAAAATCTGGGGAGATATCCAAGGGGTGGCGATCTTG
GCAGTTTCCGCGGAGTTGCGAGCTGCTCGTCCTCCGAAACCCGGCGAGAT
GGCCAAGGTACCCGAGAAAGCTCCAGATCTACCGCCGGCGTTTGTAGAGC
GAAGCGAACTTGTCGAATCTGTAGCCAAACACCTCGTGGCGACGGAGCGG
GCGGCCGATACAGCACACGTTCTCCGTGGCATCCCCGGGGGGGGCAAGAC
AGTCGCCGCCAGTTCAGTAGTGCACTGTGAGAGCGTGCGCCGGAGCTTCA
AGGACGGGATGTTCTGGGTGCAAGTAGGACAAGTTGGTTCGGGGAATCCG
ACCGCCCTGTTGAAGAGCTTGGCGGAAGATCTTGAGCATGCGCCCTCAAA
TCGACCACGCACGGTCCCGCACGAGTTCAGGGACGTCGAGCACGTCATCA
GCCATCTGGTGGGCGTTCTCAAGCAGGGTAATCTGCGATGTCTCGCGGTG
CTGGATGATGTATGGGACCGTGAGATAGTCCCGCTGTTCCTGCGTACAGG
GTTTCACTGCTTGGTGACGACACGCGATCTAGCAGTGGTACCTCGCCACC
TGCGGGGAGCGTGCACGCCGGTGGATATGCTGACGGAAACCGAGGCACTG
CAGCTCCTGAAGAATGCGAGTCGGGCAACTTCAAGTATTCCGAGGGACGA
GGGCCTGAAGACCCTCCTACTTTATTACAGACGCTTGAGGACGTCCAGCG
GCTTCTCGCGGCCAAGAAGCAATGGACTGCGTTTCTTCAAGGTGGGTGGG
CGAACGGTTGCCCAGAAGACGTCGAGGAAGCGTTGCGGTGGATGGCATCA
GGGGCCGTGGGACTCTTGGGTGTCGCAAGCGTGGGGCCTCTCACGCCCAT
CTGCGAGGCCTTCAAGGGGCTGATCCAGGCGGCGGAGGGTGCGGCGGAGG
CAGACGCGAACCTGAGGGAACTGATCGCCTGGTGTGCCTTCCTGTTGACC
GAAGTCTTGCGCAAGCACGGAAAGGAGTTGGACGCTTCCGCGCCCGTCAT
GCAACCCCTCAAGGACTTTGAATCCACCACAAACCAACTAGCGAAGCGTG
CGAAAAAGCTGGCGTCGAGAGGGAAGTGCACGGCGTTTCTCTGCTACTCG
AGGGACGGGAAACAGATCCAAGACTTCGACGCGAAGCTCCGCAAAATCTG
GGGAGATATCCAAGGGGTGGCGATCTTGGCAGTTTCCGCGGAGTTGCGAG
CTGCTCGTCCTCCGAAACCCGGCGAGATGGCCAAGGTACCCGAGAAAGCT
CCAGATCTACCGCCGGCGTTTGTAGAGCGAAGCGAACTTGTCGAATCTGT
AGCCAAACACCTCGTGGCGACGGAGCGGGCGGCCGATACAGCACACGTTC
TCCGTGGCATCCCCGGGGGGGGCAAGACAGTCGCCGCCAGTTCAGTAGTG
CACTGTGAGAGCGTGCGCCGGAGCTTCAAGGACGGGATGTTCTGGGTGCA
AGTAGGACAAGTTGGTTCGGGGAATCCGACCGCCCTGTTGAAGAGCTTGG
CGGAAGATCTTGAGCATGCGCCCTCAAATCGACCACGCACGGTCCCGCAC
GAGTTCAGGGACGTCGAGCACGTCATCAGCCATCTGGTGGGCGTTCTCAA
GCAGGGTAATCTGCGATGTCTCGCGGTGCTGGATGATGTATGGGACCGTG
AGATAGTCCCGCTGTTCCTGCGTACAGGGTTTCACTGCTTGGTGACGACA
CGCGATCTAGCAGTGGTACCTCGCCACCTGCGGGGAGCGTGCACGCCGGT
GGATATGCTGACGGAAACCGAGGCACTGCAGCTCCTGAAGAATGCGAGTC
GGGCAACTTCAAGTATTCCGAGGGACGAGGGCCTGAAGGTTGCCGGTGAC
TGCGGCTTTGTCCCGCTTGCCATCGGCATCATCGGTGCCATGGGTATCTC
GCGAGTGAACCCGCACTCCCCCGAAACATGGCGGGGTGTGCACGCGCGGC
TAGTCGAAGAACCAACCCTGGTGCAAGACCATGTTGGAGGTGCCCTCGCC
GTCAGCTTTCGTGCGCTCAACGAGAAGGCCAGGACGCGGTTCCGCAAGCT
TGGTGTTCTGGCGCGGGGGGTACGTGCCCCGGTCGACATGGTGGCTCATC
TCTGGGAACAGGTTGCCGGTGACTGCGGCTTTGTCCCGCTTGCCATCGGC
ATCATCGGTGCCATGGGTATCTCGCGAGTGAACCCGCACTCCCCCGAAAC
ATGGCGGGGTGTGCACGCGCGGCTAGTCGAAGAACCAACCCTGGTGCAAG
ACCATGTTGGAGGTGCCCTCGCCGTCAGCTTTCGTGCGCTCAACGAGAAG
GCCAGGACGCGGTTCCGCAAGCTTGGTGTTCTGGCGCGGGGGGTACGTGC
CCCGGTCGACATGGTGGCTCATCTCTGGGAACAGGACGCTAGCGACACAA
CGTTGTTGATGGGCGACCTGGTTGACAAGTCCCTCGTGAAGGTCGTGGAG
CAGAGCTACTACCTGCACGACCTGGTGCTCGATTTTGCGAAGGACGAGCT
AAGGAAGCTGCGGAGGCGGGTGCAGCTTGTCACGTCTCGCCAAGCGCAGT
ACCTGGGCACGATATCCGTGCTCGAGGGATACGCACTGGCCGGTGAGGTG
TTGCGGGGCTTCTACGCCCTCATGGCTCTGTGGAAGTCCGTGGAAGACCT
GTCTGGCGACCAGCAGCTGGAGGTAGGCACGTACGGGGCCAGCCTGAAGG
CATTGGAGGAGAGCGAACCAACAACAGATATAGCCTATGCGAACTGGGCT
GCGGGGAGGTTGTTCAAACTCCAGGACGCTAGCGACACAACGTTGTTGAT
GGGCGACCTGGTTGACAAGTCCCTCGTGAAGGTCGTGGAGCAGAGCTACT
ACCTGCACGACCTGGTGCTCGATTTTGCGAAGGACGAGCTAAGGAAGCTG
CGGAGGCGGGTGCAGCTTGTCACGTCTCGCCAAGCGCAGTACCTGGGCAC
GATATCCGTGCTCGAGGGATACGCACTGGCCGGTGAGGTGTTGCGGGGCT
TCTACGCCCTCATGGCTCTGTGGAAGTCCGTGGAAGACCTGTCTGGCGAC
CAGCAGCTGGAGGTAGGCACGTACGGGGCCAGCCTGAAGGCATTGGAGGA
GAGCGAACCAACAACAGATATAGCCTATGCGAACTGGGCTGCGGGGAGGT
TGTTCAAACTCCAGGGCAAGTTTGCTCAGGCAGAGCCACTGTACGGGCGG
CCACAGGCCATGCAAGAGAAAGCGCTTGGTCCGGACCATCCGGATGTGGC
GACATCGCTCATCAACCGGGCGGGGTTGTTGAGAAAATGTTCCTCCGCAA
TTTTTTCTCCGACAATCACAATGAAATACGACTCTACCACTCTCTTTACT
ACATCCAGGGCAAATATGCAGAGGCTGAGCCACTGTATGAGCGGTGCCAG
GCGATAGGGCAAGTTTGCTCAGGCAGAGCCACTGTACGGGCGGCCACAGG
CCATGCAAGAGAAAGCGCTTGGTCCGGACCATCCGGATGTGGCGACATCG
CTCATCAACCGGGCGGGGTTGTTGAGAAAATGTTCCTCCGCAATTTTTTC
TCCGACAATCACAATGAAATACGACTCTACCACTCTCTTTACTACATCCA
GGGCAAATATGCAGAGGCTGAGCCACTGTATGAGCGGTGCCAGGCGATAG
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