mRNA_S-firma_F_contig10791.1058.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10791.1058.1
Unique NamemRNA_S-firma_F_contig10791.1058.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: D8LH12_ECTSI (Zn-dependent peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 7.860e-136
Identity = 201/231 (87.01%), Postives = 216/231 (93.51%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
            MMETGTS+MDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKV             A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL+VL+GSS AVSEFLSRLPEETEGAA+NTAPL++Q+KLL++KDEGFVVPTQVNYVVKGGPLY+PGEV
Sbjct:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYKPGEV 231          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 9.840e-132
Identity = 210/238 (88.24%), Postives = 225/238 (94.54%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-------AVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
            MMETGTS MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGKAV+DKVP MLSIM DV+TDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL       +VL+GSS AVSEFLSRLPEETEGA +NTAPL++Q+KLLE+KDEGFVVPTQVNYVVKGGPLY+PGEV
Sbjct:  669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNTAPLAEQVKLLEEKDEGFVVPTQVNYVVKGGPLYKPGEV 906          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.440e-63
Identity = 116/239 (48.54%), Postives = 170/239 (71.13%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
            ++ETG   MDRV+L+R IG+QTGGVY T L   +   GG +A    +  YLFLRGKAVS K P +L I+  V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GYL E+ GG++ + TVK +L+ AE++WP +LARL+++RA+++++   L        VL+ ++ A+S F++ +P   EG  S++   + +  L+  ++EGF V TQVNYV KGG L+QPGEV
Sbjct:  658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSHSN-WAAEANLIPARNEGFAVQTQVNYVGKGGRLFQPGEV 895          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A835ZGW9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.780e-54
Identity = 112/243 (46.09%), Postives = 158/243 (65.02%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVY-ATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-------AVLEGSSVAVSEFLSRLPEETEGAASNTAPLSD-----QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            ++E+G    DRV+LSR I + TGGVY +T    +  A GAVA P  +  YLFLRGKAVS K P +LSI+  V+ +A LDSQQR VE+LKE KARL +S+ GSGHSFA TR+++R+ ++ YL E+ GG++ + TVK  L  AE +WP +LARL+ +RA +  +   +        VL+ +   V +F++ +PE    +AS  AP S      + +    ++EGF+VPTQVNYV KGG L++PGE
Sbjct:  593 LLESGAGARDRVELSRHINTHTGGVYCSTVTGTRAGANGAVAAPDDVVGYLFLRGKAVSAKTPELLSIIRSVVREARLDSQQRAVEILKEMKARLEASVVGSGHSFAATRIDSRHALEPYLNEIGGGLSSLATVKANLAAAEEDWPALLARLEELRAAIFKRDNLIINLTGDQGVLDAAEQPVRDFIASMPE----SASVLAPASGAGWAKEAQFSPIRNEGFIVPTQVNYVGKGGRLFEPGE 831          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S2V8U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.710e-54
Identity = 107/239 (44.77%), Postives = 156/239 (65.27%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQL-KLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            + + GTS++DRV L R+IG+ TGG+ A+F  DQ  ++GG V+DP  +  +LF+RGK V  K+  +  ++ D+L DA LD+QQRV+E+LK+S A   SS+  SGHSFA +RL+ARYT   Y+ E+ GG++YI T+K + E+AE +WP +LARL+ +R  LLSK   L        VL+ +   ++ F+ ++P          AP   ++  LL  ++E FVVPTQVNYV KGG L +PGE
Sbjct:  664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVPSR------EVAPQRWEVGSLLPVENEAFVVPTQVNYVGKGGRLVEPGE 896          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7R9U9I1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.470e-53
Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            ++E GT+  D   L+RRIG  TGGV +  L D    P   G   +   +  YLFLRGKAV DKV  + +IM D+LTD NLD Q RV+EML+E+KA + SSI  SGH+FA +RL A  T  G L E  GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+    +  L G      +SV V+E F + LP++   + AA  + P  D   +  L    EG VVPTQVNYV   G +YQPG+
Sbjct:  168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGD 409          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S2RFS8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.710e-52
Identity = 112/255 (43.92%), Postives = 156/255 (61.18%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKK-----FL------AVLEGSSVAVSEFLSRLPEETEGAASN----------TAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            M + G  ++  ++LSR+IG+ TGG    ++ T +  +    G V+D   +   L L+GKA +DK+  + SI   +LT ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT  GY+ E   G+TY+N+VK MLEEAE +WP  LARL+++R T+L  +      FL      AV++G    V  FL  LP + +G+A            T   ++ +K     DEGFVVPTQV+YV KGG L+  GE
Sbjct:  686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSALIDFHNEEHPWLTQAKTEMVKNAPIADEGFVVPTQVSYVGKGGKLFDVGE 940          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S1XMW9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.850e-52
Identity = 113/244 (46.31%), Postives = 154/244 (63.11%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD--QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEE-----TEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            ++E GT  MD   ++RRIG+ TGGV A  L D  +  AG AVA    +  YLFLRGKAV DK+P + SI  D+ TD NLD Q RV+EML+E++A + SS+  SGHS+A TRL AR T  G L E  GG++Y+ TVK++LE+AEN+WP +LARL+ ++  ++     +  L G      S+  V+E F + LP++      EG  + T  LS  ++ L D DEG VVPTQVNYV   G +Y+ GE
Sbjct:  611 LLECGTKSMDETAMTRRIGTHTGGVRAALLRDLVEDPAGAAVAGDE-IVHYLFLRGKAVPDKIPELFSIFKDIFTDVNLDRQSRVLEMLRETRASMESSVVTSGHSYAATRLAARTTGLGVLREKVGGISYLETVKELLEQAENDWPALLARLEAIQKKIVDADALIVNLTGDKEVLGSATPVAESFAAGLPKQGKVAFPEGRTTRTVDLSG-MERLPDVDEGLVVPTQVNYVGMAGRIYETGE 852          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S4MIS0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.180e-52
Identity = 111/256 (43.36%), Postives = 157/256 (61.33%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-----------AVLEGSSVAVSEFLSRLP------EETEGAASNTAPLSDQLKLLEDK-----DEGFVVPTQVNYVVKGGPLYQPGE 690
            ++ETG  D+  VQLSRR+G  TGG+ A+ L     ++     A +D   +   LFLRGK+ +DK   + S+   +LTDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT  GY+GE  GG+TY++TVK++L+ AEN+WP +LARL+ +R+ LL + K              V+E  +  V  FLS LP      E+ +   S   P   Q K          DEGFVVPTQV+YV KGG +Y+ GE
Sbjct:  705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLPGDAAPSEKFQDFYSEDHPWVTQAKSEMSAAAPLVDEGFVVPTQVSYVGKGGKIYEAGE 960          
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7R9U8K2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K2_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.090e-51
Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 1
Query:    1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
            ++E GT+  D   L+RRIG  TGGV +  L D    P   G   +   +  YLFLRGKAV DKV  + +IM D+LTD NLD Q RV+EML+E+KA + SSI  SGH+FA +RL A  T  G L E  GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+    +  L G      +SV V+E F + LP++   + AA  + P  D   +  L    EG VVPTQVNYV   G +YQPG+
Sbjct:  687 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGD 928          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH12_ECTSI7.860e-13687.01Zn-dependent peptidase (Partial) (Fragment) n=1 Ta... [more]
A0A6H5LB25_9PHAE9.840e-13288.24M16C_associated domain-containing protein n=1 Tax=... [more]
A0A835YY54_9STRA1.440e-6348.54Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A835ZGW9_9STRA1.780e-5446.09Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A7S2V8U1_9STRA2.710e-5444.77Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7R9U9I1_9STRA2.470e-5347.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RFS8_9STRA1.710e-5243.92Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1XMW9_9STRA3.850e-5246.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4MIS0_9STRA8.180e-5243.36Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7R9U8K2_9STRA1.090e-5147.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10791contigS-firma_F_contig10791:1095..5026 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LH12
PFAMsM16C_assoc,Peptidase_M16,Peptidase_M16_C
Max annot lvl2759|Eukaryota
KEGG koko:K06972
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0031967,GO:0031974,GO:0031975,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0051604,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564
Evalue1.29e-136
EggNOG OGsCOG1026@1|root,KOG2019@2759|Eukaryota
Descriptionmetallopeptidase activity
COG categoryT
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZn-dependent peptidase
Ec32 orthologEc-06_010810.1
Exons6
Model size693
Cds size693
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10791.1058.1prot_S-firma_F_contig10791.1058.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10791 1095..5026 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.132976-CDS-S-firma_F_contig10791:1094..12591622815621.132976-CDS-S-firma_F_contig10791:1094..1259Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 1095..1259 +
1696949459.3804522-CDS-S-firma_F_contig10791:1094..12591696949459.3804522-CDS-S-firma_F_contig10791:1094..1259Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 1095..1259 +
1622815621.1442335-CDS-S-firma_F_contig10791:1803..19111622815621.1442335-CDS-S-firma_F_contig10791:1803..1911Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 1804..1911 +
1696949459.4007242-CDS-S-firma_F_contig10791:1803..19111696949459.4007242-CDS-S-firma_F_contig10791:1803..1911Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 1804..1911 +
1622815621.1537569-CDS-S-firma_F_contig10791:2295..23601622815621.1537569-CDS-S-firma_F_contig10791:2295..2360Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 2296..2360 +
1696949459.410498-CDS-S-firma_F_contig10791:2295..23601696949459.410498-CDS-S-firma_F_contig10791:2295..2360Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 2296..2360 +
1622815621.1717038-CDS-S-firma_F_contig10791:2986..31431622815621.1717038-CDS-S-firma_F_contig10791:2986..3143Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 2987..3143 +
1696949459.4227452-CDS-S-firma_F_contig10791:2986..31431696949459.4227452-CDS-S-firma_F_contig10791:2986..3143Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 2987..3143 +
1622815621.18674-CDS-S-firma_F_contig10791:4229..43791622815621.18674-CDS-S-firma_F_contig10791:4229..4379Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 4230..4379 +
1696949459.4339764-CDS-S-firma_F_contig10791:4229..43791696949459.4339764-CDS-S-firma_F_contig10791:4229..4379Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 4230..4379 +
1622815621.2003644-CDS-S-firma_F_contig10791:4978..50261622815621.2003644-CDS-S-firma_F_contig10791:4978..5026Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 4979..5026 +
1696949459.4424548-CDS-S-firma_F_contig10791:4978..50261696949459.4424548-CDS-S-firma_F_contig10791:4978..5026Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10791 4979..5026 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10791.1058.1

>prot_S-firma_F_contig10791.1058.1 ID=prot_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=231bp
MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYL
FLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQG
SGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLAR
LQRVRATLLSKKKFLAVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQL
KLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV
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mRNA from alignment at S-firma_F_contig10791:1095..5026+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10791.1058.1 ID=mRNA_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3932bp|location=Sequence derived from alignment at S-firma_F_contig10791:1095..5026+ (Sphaerotrichia firma ET2_F female)
ATGATGGAGACCGGCACCTCGGACATGGACCGCGTGCAGCTGTCCCGCCG CATCGGCAGCCAGACGGGAGGCGTCTACGCCACCTTCCTGGCCGACCAGC CGTCCGCCGGGGGCGCCGTGGCTGACCCGGGGGCGCTCAAGCAGTACCTC TTCCTCCGCGGAAAGGTGGGGTTGTTGGGGCTGCTACTCCGTAGTGGGTC GGGTGGATTGGGGCAGTTTGTTGAGCTCGTGGCGGTGGGGGGGAGAGGAG GGTCAAAGTGATGGTATTTTAGGGGTCAAGGGGGTCTGTTTTGGAGACCT TTACGGTGTGCGGAGTTTAACTGGGGTGGGGTGTGCGTACCTCTCCGTCC CCCGCGGAATGGTGGGATGGGTTTACAGGGCGGGAAGGAGGCAGCGCCGG CTTGCGGACGGACGTAACCCCACTCGCTCTCCATTGCCACGGCGGTGGTA TACTAGTGTGATCCCTTGTGGGTCGTCTAGCTATCATGGTCGTAGTGGAG GATAGACGCCAGTGGGGCACACGACAGAAACACTAGTGGGAGGGGAAAAA ATAAAAAATAAAAACAGCGCCTCCGTCCGTCTGTCTCCTCGCCTTCCTCA CACCTCTCACGCTCATCCTTTTTGTTCTGTTCGTACGGTGGGACTGCGCG AACGGTCTTTTGCCGCCGTTGGTTGACCCGCAAAAACGATCGCGGATGAA TGCGGACAGGCGGTGTCGGACAAGGTGCCGGCCATGCTCTCCATCATGCT GGACGTGCTCACCGACGCTAACCTTGACAGCCAGCAGAGGGTCGTCGAGA TGCTCAAGGAGTCCAAGGTGCGGTGCGGCGGGATTGTGTTTGTGGTGTGT GTGTGTGTGTGTGTGTGCAAGGTGCGGTGCGATTGTGTTTTGTGACAAAA CAAAAATGCAATGTACACTCGAAACACTGGTGTGTCTGTGTGTGTGTGTG TGAAGGGTAGATTCCACCATCATTTTTCGGGGACTGCAGTAGTACCGTAT GAACGCAGGTTGGACGCGAGAACACCCACCAAAACTCGGGGGAAGAAGCG CCAGTAGTAATTGGTTTGCCGTTTAAGGTTTGGGTTTGCCGTTTAAGAGA CGGTGCAAAAACTAATAGTTGAACGTATTTTGTTCTTCGCCTACGCCTGC CTGTGCCTGTGCGTGTGCGCGTTGCGAAATGGTTGAAAAAACGCCTCGCA GGCCCGGCTTGCGTCATCCATCCAGGGATCCGGCCACTCGTTCGCGAACA CCCGCCTAGAGGCCAGGTGCGTGGAGAAGAAAGAGGCGTCGATGGGGGGG TGGGGGTGGGGGTGGGAGTAATTGCTCCCCTAGGACATTGCCTGTTTCGC CCTTCCGTGCTGTTGTGTGCTCGCGTGCGATGCGTGTTGTAATCATATAG TGGCATGCTTTGACGTGACACACGAAGTAGCATGATGCGGTAGAGTGACG GGTTTGACGGCCGAAACGCGTGTTGTATTGTCATTCAAGGCGTGTGCATG CGCCGCGCACAAGGGGGCGCTTCTGCACAAGCCTTTAAAAAAATTTCTAC ATCCGTCAGCCGTATACGTCCGTCCTGTGAATTAAGTCGTTCCAGGGGGA CTGTTGTATACACACTAACCCTCCCCGTCCCAACCAACAGCAACGCCTTT TTATCGCGGAAAGCGTCAGGCCCCGCGTGGAACGCTCCTTCCTGCCTCGC GCCTTCTGGTTCACGGAAACCAACCACGTTCGTGACCAAAGATCAACTCA TCAACTCATCAACCGTCCCGTCTTGTAAAAAGTATGTTCCGGCTGATAAC CAATACACGCCCCCAACCCTCCCGCGCGCACAACAATGCGCGCGCTCGCG AATCGAACCGAATCGCCCCGTCTGTGGTGAATGTGAATGAAGGTACACGG TGGACGGCTACCTCGGCGAGCTCCAGGGCGGCGTGACGTACATCAACACG GTCAAGGACATGCTGGAGGAGGCCGAGAACGAGTGGCCCAAGATGCTGGC CCGCCTGCAGCGAGTTCGCGCCACGCTCCTCTCCAAGAAGAAGTTCCTCG TCAACCTCACCGGAGACCAGGTGCGGTGCGGTGACGGGGCGGGGGGGCTC CGGTGCGGAAACAGGGCGGGGGGGGGGGTCCGGTGCTCCGGTTGTGATGT CACGAAATCTTGCTTTCGGAGGATTGGTCGGGATAAAAAAGTTTTTTTTT TAACACCACAGCAGTCGGCTGGCTCCTACTATAAAGCAGAGTAAGAGGTG CGAATAGCAAGGGTGAACACACGACACACCATGTGGTATCCATTTTGATG CAGTCGGGGGGCGGCAGCGTGCAGTCGCATCGATGCGGTAAAGGAAGGTA CGTAGAGGAGGCACACGCGGGCGCGGTGCGGAGACGGGGCGTTCCGAGAG AGGCGCGGTGGAGTACGTGGGCGTTGGTGTGCCTGGCGGGGCGGGTCGTT GTTGCGCCTCTCCCGACAAGAAGATGTGCCAACCCGAAGCCGTTTTTTTG TTTTTACGCCTACAGTACAGTACGTGCGTTGATTCCCTACCTCCTATGAT ATCGATTCCGTCCACAGGTGACGTGCTAAAGCAGTACCCGGCCCCGAGGG CATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT CTTTTTTTTCCTTTTTCTTCCTTCCTTGTTATTATGTTTTCGTGGCCTTT TTTTTTTTTTATTTTTTTTTTTTTTTTTTNNNNNNNNNNGCTGTGCGGGG GGGTGGCCGGTTCCGCCGTGGGAGTGTTTTTTGTTGTTTGGTGGGTGGCG AGAGGGTTTCGGGGCCCCGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTT TTATCATGTCCTAAGGACGTCAGCCGTCTCAGCCGTTTACGTCCAGCCTG TGAATAATGAGTCGGGGGACTGTTGTATATATATATATATATTTTTTTTT TTCGTTTTATTAATTTTTTTGGTCTCTTGCGGTCGCGCCTGTCGCGCGGA GTTCGCTTCGGTGCCTGTGTTAGGTTAATCACGCGTTCTTCGTTCCCACG AGACAAATTTAATTTGCGTTCATGTTTTCGTTTTCTTCTCCCCCTTGTCG TTGTCCTGCGGTGCTGTCTGTGCCTTTGCCTGCAGGCCGTGCTGGAAGGG TCTAGCGTGGCGGTGTCGGAATTCCTGTCCCGCCTCCCCGAGGAGACCGA AGGAGCGGCGTCAAACACGGCGCCCCTCTCGGACCAGCTCAAGCTCCTGG AGGACAAGGACGAGGGCTTCGTTGTGCCGACGCAGGTGAGTAAATACGCA GGAGGGGGTCCACCCCCCCCCCCCATCGTCTGTGACCCCGGTCGGGCTGT CTAGCTTGTCGAAGTGGAGGATAGGGGCCAGTGCAGTGGGAGGGAAAAAA AACAAAAAATAAATATGTAGAGGTGTCCAGATAAGATAAGTTTGAACAAA GGTTTTGCCGTATTTAGGTACGCGTGCTGTAGGCACATGCGCACCCACGC CCACGCCGACGCCCTTCCGCGTCCGAGCAAAAGGCGAGGCAAATCAACCA ACCTCAGCCTAAGGGTGCGGATCCGCTCGCCAACAAACGCGCACCCAAAG GCGTACCCCCCAGGACCCTTTTCACTTTGCTGTCCCCCTGCTGCAAGCAT CGTTGCGCCATGCTTGTGCCGCTGCCGCACGGAAACCGCGAACAACCAAG GGGGTCCCGGCACTGCGCCGGTACCACAGGCATGCCTGCTCGATTCCCAC CTGCGTCGCCACCGCTCTCCAACGTCGGTCGACCCCCCCCCCCCCCTCAC GGCAACTGCAACATCCACGCCACATAAAACCCAACCCCCAACCCGCCCCG CTACGCCACACCCCTCATGGTCGTCCCGAAACAGGTAAACTACGTCGTCA AGGGGGGCCCGCTGTATCAGCCCGGGGAGGTG
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Coding sequence (CDS) from alignment at S-firma_F_contig10791:1095..5026+

>mRNA_S-firma_F_contig10791.1058.1 ID=mRNA_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1386bp|location=Sequence derived from alignment at S-firma_F_contig10791:1095..5026+ (Sphaerotrichia firma ET2_F female)
ATGATGGAGACCGGCACCTCGGACATGGACCGCGTGCAGCTGTCCCGCCG
CATCGGCAGCCAGACGGGAGGCGTCTACGCCACCTTCCTGGCCGACCAGC
CGTCCGCCGGGGGCGCCGTGGCTGACCCGGGGGCGCTCAAGCAGTACCTC
TTCCTCCGCGGAAAGATGATGGAGACCGGCACCTCGGACATGGACCGCGT
GCAGCTGTCCCGCCGCATCGGCAGCCAGACGGGAGGCGTCTACGCCACCT
TCCTGGCCGACCAGCCGTCCGCCGGGGGCGCCGTGGCTGACCCGGGGGCG
CTCAAGCAGTACCTCTTCCTCCGCGGAAAGGCGGTGTCGGACAAGGTGCC
GGCCATGCTCTCCATCATGCTGGACGTGCTCACCGACGCTAACCTTGACA
GCCAGCAGAGGGTCGTCGAGATGCTCAAGGAGTCCAAGGCGGTGTCGGAC
AAGGTGCCGGCCATGCTCTCCATCATGCTGGACGTGCTCACCGACGCTAA
CCTTGACAGCCAGCAGAGGGTCGTCGAGATGCTCAAGGAGTCCAAGGCCC
GGCTTGCGTCATCCATCCAGGGATCCGGCCACTCGTTCGCGAACACCCGC
CTAGAGGCCAGGCCCGGCTTGCGTCATCCATCCAGGGATCCGGCCACTCG
TTCGCGAACACCCGCCTAGAGGCCAGGTACACGGTGGACGGCTACCTCGG
CGAGCTCCAGGGCGGCGTGACGTACATCAACACGGTCAAGGACATGCTGG
AGGAGGCCGAGAACGAGTGGCCCAAGATGCTGGCCCGCCTGCAGCGAGTT
CGCGCCACGCTCCTCTCCAAGAAGAAGTTCCTCGTACACGGTGGACGGCT
ACCTCGGCGAGCTCCAGGGCGGCGTGACGTACATCAACACGGTCAAGGAC
ATGCTGGAGGAGGCCGAGAACGAGTGGCCCAAGATGCTGGCCCGCCTGCA
GCGAGTTCGCGCCACGCTCCTCTCCAAGAAGAAGTTCCTCGCCGTGCTGG
AAGGGTCTAGCGTGGCGGTGTCGGAATTCCTGTCCCGCCTCCCCGAGGAG
ACCGAAGGAGCGGCGTCAAACACGGCGCCCCTCTCGGACCAGCTCAAGCT
CCTGGAGGACAAGGACGAGGGCTTCGTTGTGCCGACGCAGGCCGTGCTGG
AAGGGTCTAGCGTGGCGGTGTCGGAATTCCTGTCCCGCCTCCCCGAGGAG
ACCGAAGGAGCGGCGTCAAACACGGCGCCCCTCTCGGACCAGCTCAAGCT
CCTGGAGGACAAGGACGAGGGCTTCGTTGTGCCGACGCAGGTAAACTACG
TCGTCAAGGGGGGCCCGCTGTATCAGCCCGGGGAGGTGGTAAACTACGTC
GTCAAGGGGGGCCCGCTGTATCAGCCCGGGGAGGTG
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