mRNA_S-firma_F_contig10791.1058.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: D8LH12_ECTSI (Zn-dependent peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 7.860e-136 Identity = 201/231 (87.01%), Postives = 216/231 (93.51%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
MMETGTS+MDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKV A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL+VL+GSS AVSEFLSRLPEETEGAA+NTAPL++Q+KLL++KDEGFVVPTQVNYVVKGGPLY+PGEV
Sbjct: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYKPGEV 231
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 9.840e-132 Identity = 210/238 (88.24%), Postives = 225/238 (94.54%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-------AVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
MMETGTS MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGKAV+DKVP MLSIM DV+TDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL +VL+GSS AVSEFLSRLPEETEGA +NTAPL++Q+KLLE+KDEGFVVPTQVNYVVKGGPLY+PGEV
Sbjct: 669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNTAPLAEQVKLLEEKDEGFVVPTQVNYVVKGGPLYKPGEV 906
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.440e-63 Identity = 116/239 (48.54%), Postives = 170/239 (71.13%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGEV 693
++ETG MDRV+L+R IG+QTGGVY T L + GG +A + YLFLRGKAVS K P +L I+ V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GYL E+ GG++ + TVK +L+ AE++WP +LARL+++RA+++++ L VL+ ++ A+S F++ +P EG S++ + + L+ ++EGF V TQVNYV KGG L+QPGEV
Sbjct: 658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSHSN-WAAEANLIPARNEGFAVQTQVNYVGKGGRLFQPGEV 895
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A835ZGW9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.780e-54 Identity = 112/243 (46.09%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVY-ATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-------AVLEGSSVAVSEFLSRLPEETEGAASNTAPLSD-----QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
++E+G DRV+LSR I + TGGVY +T + A GAVA P + YLFLRGKAVS K P +LSI+ V+ +A LDSQQR VE+LKE KARL +S+ GSGHSFA TR+++R+ ++ YL E+ GG++ + TVK L AE +WP +LARL+ +RA + + + VL+ + V +F++ +PE +AS AP S + + ++EGF+VPTQVNYV KGG L++PGE
Sbjct: 593 LLESGAGARDRVELSRHINTHTGGVYCSTVTGTRAGANGAVAAPDDVVGYLFLRGKAVSAKTPELLSIIRSVVREARLDSQQRAVEILKEMKARLEASVVGSGHSFAATRIDSRHALEPYLNEIGGGLSSLATVKANLAAAEEDWPALLARLEELRAAIFKRDNLIINLTGDQGVLDAAEQPVRDFIASMPE----SASVLAPASGAGWAKEAQFSPIRNEGFIVPTQVNYVGKGGRLFEPGE 831
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S2V8U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.710e-54 Identity = 107/239 (44.77%), Postives = 156/239 (65.27%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQL-KLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
+ + GTS++DRV L R+IG+ TGG+ A+F DQ ++GG V+DP + +LF+RGK V K+ + ++ D+L DA LD+QQRV+E+LK+S A SS+ SGHSFA +RL+ARYT Y+ E+ GG++YI T+K + E+AE +WP +LARL+ +R LLSK L VL+ + ++ F+ ++P AP ++ LL ++E FVVPTQVNYV KGG L +PGE
Sbjct: 664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVPSR------EVAPQRWEVGSLLPVENEAFVVPTQVNYVGKGGRLVEPGE 896
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7R9U9I1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.470e-53 Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
++E GT+ D L+RRIG TGGV + L D P G + + YLFLRGKAV DKV + +IM D+LTD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G L E GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+ + L G +SV V+E F + LP++ + AA + P D + L EG VVPTQVNYV G +YQPG+
Sbjct: 168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGD 409
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S2RFS8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.710e-52 Identity = 112/255 (43.92%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKK-----FL------AVLEGSSVAVSEFLSRLPEETEGAASN----------TAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
M + G ++ ++LSR+IG+ TGG ++ T + + G V+D + L L+GKA +DK+ + SI +LT ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT GY+ E G+TY+N+VK MLEEAE +WP LARL+++R T+L + FL AV++G V FL LP + +G+A T ++ +K DEGFVVPTQV+YV KGG L+ GE
Sbjct: 686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSALIDFHNEEHPWLTQAKTEMVKNAPIADEGFVVPTQVSYVGKGGKLFDVGE 940
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S1XMW9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA) HSP 1 Score: 191 bits (484), Expect = 3.850e-52 Identity = 113/244 (46.31%), Postives = 154/244 (63.11%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD--QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEE-----TEGAASNTAPLSDQLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
++E GT MD ++RRIG+ TGGV A L D + AG AVA + YLFLRGKAV DK+P + SI D+ TD NLD Q RV+EML+E++A + SS+ SGHS+A TRL AR T G L E GG++Y+ TVK++LE+AEN+WP +LARL+ ++ ++ + L G S+ V+E F + LP++ EG + T LS ++ L D DEG VVPTQVNYV G +Y+ GE
Sbjct: 611 LLECGTKSMDETAMTRRIGTHTGGVRAALLRDLVEDPAGAAVAGDE-IVHYLFLRGKAVPDKIPELFSIFKDIFTDVNLDRQSRVLEMLRETRASMESSVVTSGHSYAATRLAARTTGLGVLREKVGGISYLETVKELLEQAENDWPALLARLEAIQKKIVDADALIVNLTGDKEVLGSATPVAESFAAGLPKQGKVAFPEGRTTRTVDLSG-MERLPDVDEGLVVPTQVNYVGMAGRIYETGE 852
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7S4MIS0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA) HSP 1 Score: 190 bits (482), Expect = 8.180e-52 Identity = 111/256 (43.36%), Postives = 157/256 (61.33%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-----------AVLEGSSVAVSEFLSRLP------EETEGAASNTAPLSDQLKLLEDK-----DEGFVVPTQVNYVVKGGPLYQPGE 690
++ETG D+ VQLSRR+G TGG+ A+ L ++ A +D + LFLRGK+ +DK + S+ +LTDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT GY+GE GG+TY++TVK++L+ AEN+WP +LARL+ +R+ LL + K V+E + V FLS LP E+ + S P Q K DEGFVVPTQV+YV KGG +Y+ GE
Sbjct: 705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLPGDAAPSEKFQDFYSEDHPWVTQAKSEMSAAAPLVDEGFVVPTQVSYVGKGGKIYEAGE 960
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Match: A0A7R9U8K2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K2_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.090e-51 Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVNYVVKGGPLYQPGE 690
++E GT+ D L+RRIG TGGV + L D P G + + YLFLRGKAV DKV + +IM D+LTD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G L E GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+ + L G +SV V+E F + LP++ + AA + P D + L EG VVPTQVNYV G +YQPG+
Sbjct: 687 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGD 928 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10791.1058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10791.1058.1 >prot_S-firma_F_contig10791.1058.1 ID=prot_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=231bp MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLback to top mRNA from alignment at S-firma_F_contig10791:1095..5026+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10791.1058.1 ID=mRNA_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3932bp|location=Sequence derived from alignment at S-firma_F_contig10791:1095..5026+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10791:1095..5026+ >mRNA_S-firma_F_contig10791.1058.1 ID=mRNA_S-firma_F_contig10791.1058.1|Name=mRNA_S-firma_F_contig10791.1058.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1386bp|location=Sequence derived from alignment at S-firma_F_contig10791:1095..5026+ (Sphaerotrichia firma ET2_F female)back to top |