mRNA_S-firma_F_contig10787.1048.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D7FQW6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW6_ECTSI) HSP 1 Score: 259 bits (663), Expect = 2.490e-78 Identity = 159/420 (37.86%), Postives = 229/420 (54.52%), Query Frame = 1
Query: 109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLL--DPEGGSGH------------------------------------------SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLASTGTGRPTSRS-------------HAAGQVMLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRST 1197
+D I+LV+ IYQAG ++ +C+LVKQC +A R+A+RT +V+G L A+ +F GN + SL+EL+ VL LVERC++P + + R K L+ EA L R+T DL +P+ TDI+ + ++ + DP+ EAL R I + RS G +V +++ ++A +G P + + AG +++ + RV F+ LEE E+ LG GTFGVV + +Y G +VA+KKAR + + +FR+EAE+HFA+ HDNIV V+AFS G A PPCLVMERM+ESL L +++ L II D+C+ L FLH H + HRD+KSLNVLLD GGTAKLSDFGLA + T+++ T
Sbjct: 3 VDIISLVSLIYQAGGAVIHQCKLVKQCPGQAARLAMRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKCQLGEIKDHVVNDPQQDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTALKSQGRAADPLDCADEALIQKARDAIDRGMMARSTNGS-TVGEVIRGEIAKSGVVSPLTETGGGNHGAGGGDADRTAGSLIVHVKRVRFEALEE-EEQLGLGTFGVVLAARYFGRDVAVKKARAACTSRT-LEDFRQEAELHFAMRHDNIVEVIAFSVGDAVHPPCLVMERMDESLYELLS-LQLSINFPWALGIIHDVCKALHFLHAHNIVHRDIKSLNVLLDAGGTAKLSDFGLAQVSSTVNKDT 418
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5J9C4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C4_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.070e-62 Identity = 151/420 (35.95%), Postives = 218/420 (51.90%), Query Frame = 1
Query: 109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLL--DPEGGSGH------------------------------------------SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLASTGTGRPTSRS-------------HAAGQVMLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRST 1197
+D I+LV+ IYQAG ++ +C+LVKQC +A R+A+RT +V+G L A+ +F GN + SL+EL+ VL LVERC++P + + R K L+ EA L R+T DL +P+ TDI+R + ++ + DP+ EAL R I + RS G +V +++ ++A +G P + + AG +++ + RV F+ LEE E+ LG GTFGVV + +Y G +VA+KKAR + + +FR+EAE+HFA+ HDNIV V+AFS G A PPCLVMERM+ESL L +++ L II D+C KSLNVLLD GTAKLSDFGLA + T+++ T
Sbjct: 3 VDIISLVSLIYQAGGAVIYQCKLVKQCPGQAARLAIRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKRQLGEIKDHVVNDPQQDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTALKSQGRDADPLDCADEALIQKARDAIDRGMMARSTNGS-TVGEVIRGEIAKSGVVSPLTETGGGNHGAGGGDADRTAGSLIVHVKRVRFEALEE-EEQLGLGTFGVVLAARYFGRDVAVKKARAACTSRT-LEDFRQEAELHFAMRHDNIVEVIAFSVGDAVHPPCLVMERMDESLYELLS-LQLSINFPWALGIIHDVC----------------KSLNVLLDAEGTAKLSDFGLAQVSSTVNKDT 402
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5K5F7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 3.510e-39 Identity = 120/357 (33.61%), Postives = 172/357 (48.18%), Query Frame = 1
Query: 124 LVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIR---------RAITSVQQLLD----------PEGGSGHSEALQGAVRQVIREELQVRS--APGRRSVRDIVDAKLASTGTGRP--TSRSHAAGQV---------------------MLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLG-AVRVPPPLLERLEIIQDICR 1059
LV IY+ + +++RC++ +QC EA RIA+RT++++G L + +G + LIEL+ L LVE C++P R K L E L RIT DL +P+ +I+ A+ SV+ PEGG+ Q R I ++ R+ + G SV +++ +L + P + S AAG +L L RV F+ L E LG+GTFG V +G+Y G VAIKKAR V + FR+EAE+ F + HDNIV +LAFS G A R PCLVMERM+ESL L + + P L I+ D+C+
Sbjct: 8 LVALIYETSSGVIDRCKVARQCSREAARIALRTLNILGLLGASVRGCAGGFVLERKLIELRWALDGIEQLVELCKQPVRFSATTLRACRTRATKEALRGAEVDLQRITADLRLPLLAEIKLQLDEIANETAVDSVRSTAGNHRDTSSPVLPEGGAEEDTLAQDKARDAIERGMKARTNESTGGASVEEVILDELLALSPPPPAFSPLSQAAGGSVSGNVDGIGPTSRRIGRNVGNLLELKRVRFEGLVEAVH-LGQGTFGEVVAGKYFGRAVAIKKARATVTAVQTLEGFRKEAEMQFVMQHDNIVELLAFSLGDALRSPCLVMERMQESLFGLLSQTLTIGFPAA--LGIVLDVCK 361
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8LDQ2_ECTSI (ATP binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ2_ECTSI) HSP 1 Score: 149 bits (376), Expect = 2.530e-36 Identity = 88/177 (49.72%), Postives = 108/177 (61.02%), Query Frame = 1
Query: 700 LLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAAL-VETMSRSTIANTQSTSER 1227
L+ G V + LEE ++ LG G+FGVV +G+Y G+ VAIK+A V FRREA HFA HD IV+V+AF G RPPCLVMERM+ +L FLG P L L + DIC GL +LH+ V HRD+KS N+LL GG AK+SDFGLA TM R T N Q E+
Sbjct: 118 LMKGNVVDEELEELDETLGCGSFGVVMAGRYYGKPVAIKRALSSVFSAEDRERFRREASTHFAQRHDRIVQVIAFRTGGGSRPPCLVMERMDRTLFHFLGISPAPLDLSGSLPYMIDICEGLKYLHQGGVLHRDIKSHNILLRNGG-AKVSDFGLATHGCSTMGRKT-GNNQFIDEK 292
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5JAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG2_9PHAE) HSP 1 Score: 143 bits (361), Expect = 5.280e-36 Identity = 90/206 (43.69%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 37 PETTFGYTAVAAFRSLRPPSFAVTMDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLLDPEGGSGH---SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLA 645
P FG+++ P+ TMD ITLV + ++ G+ L+ERC LVKQCH E+ RIAVR V+G+L+ AS FS ASL ELKRVL+EARDLV RCQ R + + ++ AN K GL+ VE L R+ DL IPM TDIRRA+ + + S +E L+ AVR IR+EL +A R+V DI+ L+
Sbjct: 38 PPNKFGFSS--------EPAIGCTMDAITLVAYTFEVGSSLLERCGLVKQCHTESGRIAVRAARVLGALQRASDAFSCRMEFEASLRELKRVLEEARDLVSRCQMARGVGAKIGALMGANSLKAGLVRVEGDLDRVAADLQIPMLTDIRRAVQCINERESDAAASPSGIDAEMLEQAVRDAIRKELC--NASQGRAVDDIIKDNLS 233
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8LL51_ECTSI (APEX nuclease (Apurinic/apyrimidinic endonuclease) 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL51_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.120e-35 Identity = 89/184 (48.37%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQ-----LLDPEGGSGHSEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLA 645
MD ITLV + ++ G+ L+ERCELVKQCH E+ RIAVRT V+G+L++AS EFS ASL ELKRVL+EARDLV RCQ+ R + + ++ AN K GL+ VE L R DL IPM TDIRRA+ + + P G +E L+ AVR IR+EL ++ GR +V DI+ L+
Sbjct: 1 MDAITLVAYTFEVGSSLLERCELVKQCHTESGRIAVRTARVLGALQKASNEFSCRMEFEASLRELKRVLEEARDLVSRCQKARGVGAKIGALMGANSLKAGLVRVERDLDRAAADLQIPMLTDIRRAVQCINERESEATASPSGID--AEMLEQAVRDAIRKEL-CNTSQGR-AVDDIIKDNLS 180
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8U7U7_VOLCA (Protein kinase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U7U7_VOLCA) HSP 1 Score: 103 bits (256), Expect = 5.360e-22 Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 742 EDILGEGTFGVVYSGQYMGEEVAIKKARGIVGD----QAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPC--LVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLA 1167
+ +LG+G +G VY G Y + VA+K G + D Q M F E I L H NIVRV G RPPC LVM+ M++SL S + + L L++ +D+ GL +LH + HRD+K N+L+DE GTAK+SDFGLA
Sbjct: 13 DGLLGQGAYGAVYRGVYRQDMVAVKLINGSIVDGRALQRDMESFHAELSILSRLRHKNIVRVY----GGCLRPPCIFLVMQLMQQSLDSVIHHGQRHLTLRRALQLARDVAAGLSYLHP-TIVHRDLKPANILIDESGTAKISDFGLA 155
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: H3H344_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H344_PHYRM) HSP 1 Score: 104 bits (259), Expect = 1.390e-21 Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 709 GRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKA-------RGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPP--CLVMERMEES-LSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVE 1179
G + F L+ G + G G G +S + G VA K +G Q +++EF RE E+ AL H N+V+ L GSA PP CLV+E ME LS+ + A P L+ + D+ RG+ +LHEH V HRD+KS NVLLD GTAK+SDFGL+ ++E
Sbjct: 19 GTLDFSELQFGAAV-GAGRSGSTFSAHWHGRRVAAKVVDLSSASNKGQTLAQELLKEFHREEEVASALRHPNVVQFL----GSASAPPRYCLVLEFMEGGPLSAVIRAKNGP---LDFFRLATDMARGMSYLHEHSVMHRDLKSSNVLLDAQGTAKISDFGLSCVLE 177
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A8J4BDI0_9CHLO (Protein kinase domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BDI0_9CHLO) HSP 1 Score: 108 bits (270), Expect = 1.420e-21 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 742 EDILGEGTFGVVYSGQYMGEEVAIKKARGIVGD----QAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPC--LVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLA 1167
+ +LG+G FG VY G Y + VA+K G + D Q M F E I L H NIVR+ G RPPC LVM+ M +SL S + + P L + L+I +D+ GL +LH + HRD+K N+L+DE GTAKLSDFGLA
Sbjct: 2477 DGLLGQGAFGAVYRGVYRRDMVAVKLLNGSIVDGRALQRDMASFHAELSILSRLRHKNIVRLY----GGCMRPPCIFLVMQLMRQSLDSVIHHAQQPLTLRKALQIARDVAAGLSYLHP-TIVHRDLKPANILIDEHGTAKLSDFGLA 2619
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A8K0E5C4_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0E5C4_9ROSA) HSP 1 Score: 102 bits (253), Expect = 1.320e-20 Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 724 DRLEEG-EDILGEGTFGVVYSGQYMGE---EVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEE-SLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEH---RVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRSTIANTQST 1218
+R+ EG +D +G G FG VY G + + +A+K+ ++ + + EF+ E ++ HH N+VR++ F R LV E M SL+ L A + PPP +R++I +I RG+L+LHE ++ H D+K N+LLDE G AK+SDFGLA L++ T + + T
Sbjct: 34 ERMTEGFKDEIGRGAFGTVYKGVILNDIQKVIAVKRLDKVLRNGEI--EFQTEMKVIGKTHHRNLVRLIGFCLDGPNR--LLVYEYMSNGSLADTLFAPKTPPPWEKRMQIAHNIARGILYLHEECTSKIIHCDIKPQNILLDENGCAKISDFGLAKLLQPDQTRTFTDIRGT 202 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10787.1048.1 >prot_S-firma_F_contig10787.1048.1 ID=prot_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=417bp VEEGTRARVHGFPETTFGYTAVAAFRSLRPPSFAVTMDPITLVTFIYQAGback to top mRNA from alignment at S-firma_F_contig10787:1154..4435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10787.1048.1 ID=mRNA_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3282bp|location=Sequence derived from alignment at S-firma_F_contig10787:1154..4435+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10787:1154..4435+ >mRNA_S-firma_F_contig10787.1048.1 ID=mRNA_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2502bp|location=Sequence derived from alignment at S-firma_F_contig10787:1154..4435+ (Sphaerotrichia firma ET2_F female)back to top |