mRNA_S-firma_F_contig10787.1048.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10787.1048.1
Unique NamemRNA_S-firma_F_contig10787.1048.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D7FQW6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW6_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 2.490e-78
Identity = 159/420 (37.86%), Postives = 229/420 (54.52%), Query Frame = 1
Query:  109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLL--DPEGGSGH------------------------------------------SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLASTGTGRPTSRS-------------HAAGQVMLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRST 1197
            +D I+LV+ IYQAG  ++ +C+LVKQC  +A R+A+RT +V+G L  A+ +F GN  +  SL+EL+ VL     LVERC++P     +   + R    K  L+  EA L R+T DL +P+ TDI+  +  ++  +  DP+                                                EAL    R  I   +  RS  G  +V +++  ++A +G   P + +               AG +++ + RV F+ LEE E+ LG GTFGVV + +Y G +VA+KKAR     +  + +FR+EAE+HFA+ HDNIV V+AFS G A  PPCLVMERM+ESL   L  +++       L II D+C+ L FLH H + HRD+KSLNVLLD GGTAKLSDFGLA +  T+++ T
Sbjct:    3 VDIISLVSLIYQAGGAVIHQCKLVKQCPGQAARLAMRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKCQLGEIKDHVVNDPQQDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTALKSQGRAADPLDCADEALIQKARDAIDRGMMARSTNGS-TVGEVIRGEIAKSGVVSPLTETGGGNHGAGGGDADRTAGSLIVHVKRVRFEALEE-EEQLGLGTFGVVLAARYFGRDVAVKKARAACTSRT-LEDFRQEAELHFAMRHDNIVEVIAFSVGDAVHPPCLVMERMDESLYELLS-LQLSINFPWALGIIHDVCKALHFLHAHNIVHRDIKSLNVLLDAGGTAKLSDFGLAQVSSTVNKDT 418          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5J9C4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C4_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.070e-62
Identity = 151/420 (35.95%), Postives = 218/420 (51.90%), Query Frame = 1
Query:  109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLL--DPEGGSGH------------------------------------------SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLASTGTGRPTSRS-------------HAAGQVMLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRST 1197
            +D I+LV+ IYQAG  ++ +C+LVKQC  +A R+A+RT +V+G L  A+ +F GN  +  SL+EL+ VL     LVERC++P     +   + R    K  L+  EA L R+T DL +P+ TDI+R +  ++  +  DP+                                                EAL    R  I   +  RS  G  +V +++  ++A +G   P + +               AG +++ + RV F+ LEE E+ LG GTFGVV + +Y G +VA+KKAR     +  + +FR+EAE+HFA+ HDNIV V+AFS G A  PPCLVMERM+ESL   L  +++       L II D+C                KSLNVLLD  GTAKLSDFGLA +  T+++ T
Sbjct:    3 VDIISLVSLIYQAGGAVIYQCKLVKQCPGQAARLAIRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKRQLGEIKDHVVNDPQQDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTALKSQGRDADPLDCADEALIQKARDAIDRGMMARSTNGS-TVGEVIRGEIAKSGVVSPLTETGGGNHGAGGGDADRTAGSLIVHVKRVRFEALEE-EEQLGLGTFGVVLAARYFGRDVAVKKARAACTSRT-LEDFRQEAELHFAMRHDNIVEVIAFSVGDAVHPPCLVMERMDESLYELLS-LQLSINFPWALGIIHDVC----------------KSLNVLLDAEGTAKLSDFGLAQVSSTVNKDT 402          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5K5F7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F7_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.510e-39
Identity = 120/357 (33.61%), Postives = 172/357 (48.18%), Query Frame = 1
Query:  124 LVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIR---------RAITSVQQLLD----------PEGGSGHSEALQGAVRQVIREELQVRS--APGRRSVRDIVDAKLASTGTGRP--TSRSHAAGQV---------------------MLLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLG-AVRVPPPLLERLEIIQDICR 1059
            LV  IY+  + +++RC++ +QC  EA RIA+RT++++G L  +    +G   +   LIEL+  L     LVE C++P           R    K  L   E  L RIT DL +P+  +I+          A+ SV+              PEGG+      Q   R  I   ++ R+  + G  SV +++  +L +     P  +  S AAG                       +L L RV F+ L E    LG+GTFG V +G+Y G  VAIKKAR  V     +  FR+EAE+ F + HDNIV +LAFS G A R PCLVMERM+ESL   L   + +  P    L I+ D+C+
Sbjct:    8 LVALIYETSSGVIDRCKVARQCSREAARIALRTLNILGLLGASVRGCAGGFVLERKLIELRWALDGIEQLVELCKQPVRFSATTLRACRTRATKEALRGAEVDLQRITADLRLPLLAEIKLQLDEIANETAVDSVRSTAGNHRDTSSPVLPEGGAEEDTLAQDKARDAIERGMKARTNESTGGASVEEVILDELLALSPPPPAFSPLSQAAGGSVSGNVDGIGPTSRRIGRNVGNLLELKRVRFEGLVEAVH-LGQGTFGEVVAGKYFGRAVAIKKARATVTAVQTLEGFRKEAEMQFVMQHDNIVELLAFSLGDALRSPCLVMERMQESLFGLLSQTLTIGFPAA--LGIVLDVCK 361          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8LDQ2_ECTSI (ATP binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ2_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.530e-36
Identity = 88/177 (49.72%), Postives = 108/177 (61.02%), Query Frame = 1
Query:  700 LLLGRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAAL-VETMSRSTIANTQSTSER 1227
            L+ G V  + LEE ++ LG G+FGVV +G+Y G+ VAIK+A   V        FRREA  HFA  HD IV+V+AF  G   RPPCLVMERM+ +L  FLG    P  L   L  + DIC GL +LH+  V HRD+KS N+LL  GG AK+SDFGLA     TM R T  N Q   E+
Sbjct:  118 LMKGNVVDEELEELDETLGCGSFGVVMAGRYYGKPVAIKRALSSVFSAEDRERFRREASTHFAQRHDRIVQVIAFRTGGGSRPPCLVMERMDRTLFHFLGISPAPLDLSGSLPYMIDICEGLKYLHQGGVLHRDIKSHNILLRNGG-AKVSDFGLATHGCSTMGRKT-GNNQFIDEK 292          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A6H5JAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG2_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.280e-36
Identity = 90/206 (43.69%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   37 PETTFGYTAVAAFRSLRPPSFAVTMDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQLLDPEGGSGH---SEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLA 645
            P   FG+++         P+   TMD ITLV + ++ G+ L+ERC LVKQCH E+ RIAVR   V+G+L+ AS  FS      ASL ELKRVL+EARDLV RCQ  R +  +  ++  AN  K GL+ VE  L R+  DL IPM TDIRRA+  + +       S     +E L+ AVR  IR+EL   +A   R+V DI+   L+
Sbjct:   38 PPNKFGFSS--------EPAIGCTMDAITLVAYTFEVGSSLLERCGLVKQCHTESGRIAVRAARVLGALQRASDAFSCRMEFEASLRELKRVLEEARDLVSRCQMARGVGAKIGALMGANSLKAGLVRVEGDLDRVAADLQIPMLTDIRRAVQCINERESDAAASPSGIDAEMLEQAVRDAIRKELC--NASQGRAVDDIIKDNLS 233          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8LL51_ECTSI (APEX nuclease (Apurinic/apyrimidinic endonuclease) 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL51_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.120e-35
Identity = 89/184 (48.37%), Postives = 117/184 (63.59%), Query Frame = 1
Query:  109 MDPITLVTFIYQAGNELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIELKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITGDLNIPMQTDIRRAITSVQQ-----LLDPEGGSGHSEALQGAVRQVIREELQVRSAPGRRSVRDIVDAKLA 645
            MD ITLV + ++ G+ L+ERCELVKQCH E+ RIAVRT  V+G+L++AS EFS      ASL ELKRVL+EARDLV RCQ+ R +  +  ++  AN  K GL+ VE  L R   DL IPM TDIRRA+  + +        P G    +E L+ AVR  IR+EL   ++ GR +V DI+   L+
Sbjct:    1 MDAITLVAYTFEVGSSLLERCELVKQCHTESGRIAVRTARVLGALQKASNEFSCRMEFEASLRELKRVLEEARDLVSRCQKARGVGAKIGALMGANSLKAGLVRVERDLDRAAADLQIPMLTDIRRAVQCINERESEATASPSGID--AEMLEQAVRDAIRKEL-CNTSQGR-AVDDIIKDNLS 180          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: D8U7U7_VOLCA (Protein kinase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U7U7_VOLCA)

HSP 1 Score: 103 bits (256), Expect = 5.360e-22
Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  742 EDILGEGTFGVVYSGQYMGEEVAIKKARGIVGD----QAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPC--LVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLA 1167
            + +LG+G +G VY G Y  + VA+K   G + D    Q  M  F  E  I   L H NIVRV     G   RPPC  LVM+ M++SL S +   +    L   L++ +D+  GL +LH   + HRD+K  N+L+DE GTAK+SDFGLA
Sbjct:   13 DGLLGQGAYGAVYRGVYRQDMVAVKLINGSIVDGRALQRDMESFHAELSILSRLRHKNIVRVY----GGCLRPPCIFLVMQLMQQSLDSVIHHGQRHLTLRRALQLARDVAAGLSYLHP-TIVHRDLKPANILIDESGTAKISDFGLA 155          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: H3H344_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H344_PHYRM)

HSP 1 Score: 104 bits (259), Expect = 1.390e-21
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  709 GRVHFDRLEEGEDILGEGTFGVVYSGQYMGEEVAIKKA-------RGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPP--CLVMERMEES-LSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVE 1179
            G + F  L+ G  + G G  G  +S  + G  VA K         +G    Q +++EF RE E+  AL H N+V+ L    GSA  PP  CLV+E ME   LS+ + A   P   L+   +  D+ RG+ +LHEH V HRD+KS NVLLD  GTAK+SDFGL+ ++E
Sbjct:   19 GTLDFSELQFGAAV-GAGRSGSTFSAHWHGRRVAAKVVDLSSASNKGQTLAQELLKEFHREEEVASALRHPNVVQFL----GSASAPPRYCLVLEFMEGGPLSAVIRAKNGP---LDFFRLATDMARGMSYLHEHSVMHRDLKSSNVLLDAQGTAKISDFGLSCVLE 177          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A8J4BDI0_9CHLO (Protein kinase domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BDI0_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 1.420e-21
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  742 EDILGEGTFGVVYSGQYMGEEVAIKKARGIVGD----QAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPC--LVMERMEESLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLA 1167
            + +LG+G FG VY G Y  + VA+K   G + D    Q  M  F  E  I   L H NIVR+     G   RPPC  LVM+ M +SL S +   + P  L + L+I +D+  GL +LH   + HRD+K  N+L+DE GTAKLSDFGLA
Sbjct: 2477 DGLLGQGAFGAVYRGVYRRDMVAVKLLNGSIVDGRALQRDMASFHAELSILSRLRHKNIVRLY----GGCMRPPCIFLVMQLMRQSLDSVIHHAQQPLTLRKALQIARDVAAGLSYLHP-TIVHRDLKPANILIDEHGTAKLSDFGLA 2619          
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Match: A0A8K0E5C4_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0E5C4_9ROSA)

HSP 1 Score: 102 bits (253), Expect = 1.320e-20
Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 1
Query:  724 DRLEEG-EDILGEGTFGVVYSGQYMGE---EVAIKKARGIVGDQAVMREFRREAEIHFALHHDNIVRVLAFSEGSAERPPCLVMERMEE-SLSSFLGAVRVPPPLLERLEIIQDICRGLLFLHEH---RVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRSTIANTQST 1218
            +R+ EG +D +G G FG VY G  + +    +A+K+   ++ +  +  EF+ E ++    HH N+VR++ F      R   LV E M   SL+  L A + PPP  +R++I  +I RG+L+LHE    ++ H D+K  N+LLDE G AK+SDFGLA L++     T  + + T
Sbjct:   34 ERMTEGFKDEIGRGAFGTVYKGVILNDIQKVIAVKRLDKVLRNGEI--EFQTEMKVIGKTHHRNLVRLIGFCLDGPNR--LLVYEYMSNGSLADTLFAPKTPPPWEKRMQIAHNIARGILYLHEECTSKIIHCDIKPQNILLDENGCAKISDFGLAKLLQPDQTRTFTDIRGT 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10787.1048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQW6_ECTSI2.490e-7837.86Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5J9C4_9PHAE1.070e-6235.95Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K5F7_9PHAE3.510e-3933.61Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LDQ2_ECTSI2.530e-3649.72ATP binding protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JAG2_9PHAE5.280e-3643.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL51_ECTSI1.120e-3548.37APEX nuclease (Apurinic/apyrimidinic endonuclease)... [more]
D8U7U7_VOLCA5.360e-2241.89Protein kinase domain-containing protein n=1 Tax=V... [more]
H3H344_PHYRM1.390e-2141.32Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A8J4BDI0_9CHLO1.420e-2143.92Protein kinase domain-containing protein n=3 Tax=V... [more]
A0A8K0E5C4_9ROSA1.320e-2036.42Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10787contigS-firma_F_contig10787:1154..4435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FQW6
Preferred nameRIPK1
PFAMsDeath,Pkinase,Pkinase_Tyr,RHIM
Max annot lvl2759|Eukaryota
KEGG koko:K02861,ko:K04424
KEGG Pathwayko04010,ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko05160,ko05169,map04010,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map05160,map05169
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0001959,GO:0002218,GO:0002221,GO:0002224,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002756,GO:0002757,GO:0002758,GO:0002761,GO:0002763,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005123,GO:0005126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007249,GO:0007254,GO:0007257,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010803,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022607,GO:0022898,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031090,GO:0031098,GO:0031264,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031625,GO:0031982,GO:0032147,GO:0032239,GO:0032268,GO:0032270,GO:0032409,GO:0032412,GO:0032677,GO:0032680,GO:0032757,GO:0032760,GO:0032813,GO:0032872,GO:0032874,GO:0032879,GO:0032991,GO:0033209,GO:0033554,GO:0033674,GO:0034097,GO:0034138,GO:0034612,GO:0034762,GO:0034765,GO:0035556,GO:0035666,GO:0036211,GO:0036289,GO:0042221,GO:0042325,GO:0042327,GO:0042802,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043124,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043269,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043549,GO:0043933,GO:0044070,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044877,GO:0045088,GO:0045089,GO:0045121,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046328,GO:0046330,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051291,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051403,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0060544,GO:0060545,GO:0060548,GO:0060759,GO:0065003,GO:0065007,GO:0065009,GO:0070227,GO:0070231,GO:0070265,GO:0070266,GO:0070302,GO:0070304,GO:0070513,GO:0070646,GO:0070647,GO:0070848,GO:0070887,GO:0070926,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071550,GO:0071704,GO:0071840,GO:0071887,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0097191,GO:0097300,GO:0097342,GO:0097343,GO:0097435,GO:0097527,GO:0097708,GO:0098588,GO:0098589,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0140096,GO:1900407,GO:1900409,GO:1901026,GO:1901031,GO:1901033,GO:1901099,GO:1901564,GO:1901565,GO:1901575,GO:1902041,GO:1902042,GO:1902105,GO:1902107,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902882,GO:1902884,GO:1903201,GO:1903205,GO:1903209,GO:1903506,GO:1903508,GO:1903555,GO:1903557,GO:1903706,GO:1903708,GO:1903959,GO:1905206,GO:1990000,GO:2000026,GO:2000112,GO:2000116,GO:2000377,GO:2000379,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238,GO:2001239,GO:2001240
Evalue4.09e-79
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.7.11.1,2.7.11.25
Descriptionprotein kinase activity
COG categoryKLT
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons4
Model size1252
Cds size1251
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10787.1048.1prot_S-firma_F_contig10787.1048.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10787 1154..4435 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.053358-CDS-S-firma_F_contig10787:1153..14921622815620.053358-CDS-S-firma_F_contig10787:1153..1492Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 1154..1492 +
1696949458.5953326-CDS-S-firma_F_contig10787:1153..14921696949458.5953326-CDS-S-firma_F_contig10787:1153..1492Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 1154..1492 +
1622815620.0666692-CDS-S-firma_F_contig10787:1843..23671622815620.0666692-CDS-S-firma_F_contig10787:1843..2367Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 1844..2367 +
1696949458.614871-CDS-S-firma_F_contig10787:1843..23671696949458.614871-CDS-S-firma_F_contig10787:1843..2367Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 1844..2367 +
1622815620.079304-CDS-S-firma_F_contig10787:3143..33391622815620.079304-CDS-S-firma_F_contig10787:3143..3339Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 3144..3339 +
1696949458.6251745-CDS-S-firma_F_contig10787:3143..33391696949458.6251745-CDS-S-firma_F_contig10787:3143..3339Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 3144..3339 +
1622815620.0898175-CDS-S-firma_F_contig10787:4243..44351622815620.0898175-CDS-S-firma_F_contig10787:4243..4435Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 4244..4435 +
1696949458.6340163-CDS-S-firma_F_contig10787:4243..44351696949458.6340163-CDS-S-firma_F_contig10787:4243..4435Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10787 4244..4435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10787.1048.1

>prot_S-firma_F_contig10787.1048.1 ID=prot_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=417bp
VEEGTRARVHGFPETTFGYTAVAAFRSLRPPSFAVTMDPITLVTFIYQAG
NELVERCELVKQCHAEATRIAVRTVHVMGSLEEASAEFSGNAGINASLIE
LKRVLQEARDLVERCQRPRSLVVRARSIGRANVNKRGLIDVEAQLLRITG
DLNIPMQTDIRRAITSVQQLLDPEGGSGHSEALQGAVRQVIREELQVRSA
PGRRSVRDIVDAKLASTGTGRPTSRSHAAGQVMLLLGRVHFDRLEEGEDI
LGEGTFGVVYSGQYMGEEVAIKKARGIVGDQAVMREFRREAEIHFALHHD
NIVRVLAFSEGSAERPPCLVMERMEESLSSFLGAVRVPPPLLERLEIIQD
ICRGLLFLHEHRVTHRDVKSLNVLLDEGGTAKLSDFGLAALVETMSRSTI
ANTQSTSERPDIGHKV*
back to top

mRNA from alignment at S-firma_F_contig10787:1154..4435+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10787.1048.1 ID=mRNA_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3282bp|location=Sequence derived from alignment at S-firma_F_contig10787:1154..4435+ (Sphaerotrichia firma ET2_F female)
GTAGAGGAGGGCACGAGGGCACGGGTTCACGGGTTCCCGGAGACGACATT CGGCTACACTGCTGTTGCTGCCTTTCGTTCGCTCCGCCCACCGTCCTTCG CCGTAACCATGGACCCAATCACCCTGGTAACGTTCATCTACCAGGCGGGC AACGAGCTTGTTGAACGATGCGAGCTGGTCAAGCAATGCCACGCCGAGGC AACCCGCATCGCTGTCCGGACTGTCCATGTCATGGGCTCGCTGGAGGAAG CTTCAGCCGAGTTCTCAGGAAATGCCGGCATCAACGCAAGCCTTATTGAG CTAAAGCGAGTGCTACAGGAAGCTCGGGATCTAGTGGAGGTAAACCGTGC TCGCTGTTTGAGTTGCGTCGATTGTTTAGGTTGCCTGCTTCATCGTCAAA TGTCGAACGGATCGCACAAATAAATCGTTGTCGTATGTACCCTACCGAAC TTATTTTCCGACGCAATTGGCAGAAGGCGGTTGACCTCCTTCTGCAGACT TGCTTCTAGAAGCTGTAACACTAGGCAGAGAACGCGGTCGAAAGCACCAT TTGGAGCCTCGATGAAGTTTCGCATGGTGTCATCTCTGCTGCTACTTCTG ATGTTCTTCTTTCAACTATAGCAGTGGTAACCTCTGCCTCTCTCTCTCCT TGTCCAAAATTTGTCAAATATTTAATTTTCGATTGAACAGCGCTGCCAGC GCCCGAGGAGTCTTGTCGTAAGAGCACGGTCAATAGGACGAGCCAATGTT AACAAGCGTGGGCTCATCGACGTCGAGGCCCAGCTCCTACGTATCACGGG CGACCTTAACATACCAATGCAAACCGATATCCGGAGGGCTATCACATCCG TTCAGCAACTTCTCGATCCGGAAGGCGGCAGCGGGCATAGTGAGGCGCTG CAGGGAGCAGTGCGACAGGTTATCCGCGAAGAACTTCAAGTTCGCAGCGC GCCTGGGCGACGGTCGGTTCGTGACATCGTTGATGCCAAGCTTGCCAGCA CGGGTACAGGCCGGCCTACTAGTAGATCCCATGCCGCGGGTCAGGTGATG CTTCTCCTCGGTCGTGTACACTTCGATAGGCTGGAAGAGGGAGAAGATAT CCTCGGTGAAGGGACGTTCGGTGTCGTCTACTCTGGCCAGTACATGGGGG AAGAGGTCGCCATCAAGAAGGCCCGCGGTATCGTCGGGGATCAAGCCGTG ATGCGCGAGTTCAGGTAGGTGCTTCTACAATCTTGGGGGTTTGATTTCAT GTTACTGTTGTTACGCTGGCATTGGGTGTCGTCAACCGTCACACGGCACT CCAAAGTACCCATGCAACGATCGGGAAACAAACTGTACTCGGTGCCCCGC GCCCTCTTCACGCTACGATTATGTTGGCGGCGTGTTGCTTCTGTAGTGGC TTCAATACAACGACACCCGCACATTTCGTGCCGGAATCCTTTTCCCTGGC CGGTCCATGTCTACGATCTCTCACGCACGGAACCAAAACCGATACAAGAT TTAATTGTCGCATGTCATCCGCGCGCCACAGCGTGGAAGATTTGGCTTCT GTCGATCGTACAATATCCCACGTGGGTTTGCTGGTGAAGGCATACCGTTT TAGTGGAATACTTCTTGAGTGGCATTGAGGGAACCACTGTGTTGTGGTAA AGAGTCTACGTGAGGGGAGCTCGGCTGGAGATTTCTGATGCTTAATTACC AGCAAACCTGGGAGTTTGTGACCGAAGCCTGTCCCATGATTCCGCAAATC GCACGGTTGGTTCGGAAAAAGTTCCGATGACACCAAGTAGTTTTCACCAA GATCGGCTTGGCCGCAGCTCGCGCTATTGTACCTAGCAATCGACGTGGAA GAAAAATATCGGGTGTTGGCGAGATTACTTGGTCATCTCATACGGCTGTC CCATTCATCAGGAAAATGAACGCATTTCTGACTGGAACGGCCACTGCTGT TGTCGACCGTTCGCTGTGTGCCTGTCGGGTTTGCATCAAGGCGCGAAGCG GAAATTCATTTCGCGCTACACCACGACAACATCGTCCGCGTCTTGGCTTT CAGCGAGGGGAGCGCTGAACGCCCACCCTGCTTGGTGATGGAGCGTATGG AGGAATCACTATCCAGCTTCTTGGGGGCAGTGAGGGTCCCACCACCGCTG CTCGAGCGCCTCGAGATTATTCAGGACATTTGTCGGGTATGTCCTTGTTC CCCTCTGTCTATCTATCTCTCTCTCCGTCTCCCTCTCTCTGGTCCGTTAA ATTGAGTTTAGTCTGTTTCGTCGTTTTCATTTTGAAATGGCACATCAAAA TGTTAGCTCGTTTTTTGCTCTCAGAGGTATTGAAGCGGTGCTGACCCACC ACACCCAAAAATACACGATAGATGGCAGGGGGGCAGGCACTACCGAAGTC GGAGGTTCGGGTATGTAGTACGGAGTAATTGTTTTGTCGTCATGCTGCAT GAGTCGCAGATACCGCGAAAACGAAAACTGGAAGGAGGCTCTCTGTGTGG CAGACAAAATCAGACGGCGTACATGGTTGCGCTGTTTAGCGCCTCCATAC CCCCAAAACAAATATGTCCGTGTGTTTGTTTGGGGTGTGTATCTCTCTCG CGTGACACGGCTCGAAACTAGTAGTTTTTGTGTTTTCGTTGAGCGTTTTC GTGTACTCGTGAGAGGAGCAGAGACGACGGCATAGGTGTGAGGTGCTACG CAGGAATGCGGAGAGTAGTTCTACTGTAGGTGTGATAATCGTTGGGTCAA GTGGAACGAAATGTATTGATTTCGAGGAGATCGAAGCATGTTCAGAATAC CCTGCAGCCCCAGCTGATACGTCCTGCACTGGCCATGATAGCAGCAGGTG CTTCGTCGCTACTACGATGCTGTTCACCGAGTCTGGTGTCGAATAATTCT GTAATGGAAGGGTGACCGGCTTGAAGCGGCGCATAGTGTGACGGAGCTCT GGCTTCCTTGCACGTTTCTCGCGTTTCGTGCTGAATGTTTGGTGGCTCAC CAACTCGTCCGGCCGGTTGTCTCCGACGTGCGGTGTACTTCTGCACTGCC GTGTTTGTGCTTGTCGTACCCGTTTGCTTGTGTTTCGTAGGGTCTACTCT TTCTTCACGAGCATCGTGTCACCCACCGTGATGTGAAAAGCCTCAACGTG CTACTCGACGAGGGAGGGACTGCCAAGCTCTCCGACTTTGGCCTTGCGGC TTTAGTGGAAACCATGTCGAGGAGCACTATTGCCAACACGCAATCGACGA GCGAACGCCCCGACATTGGCCACAAGGTATGA
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig10787:1154..4435+

>mRNA_S-firma_F_contig10787.1048.1 ID=mRNA_S-firma_F_contig10787.1048.1|Name=mRNA_S-firma_F_contig10787.1048.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2502bp|location=Sequence derived from alignment at S-firma_F_contig10787:1154..4435+ (Sphaerotrichia firma ET2_F female)
GTAGAGGAGGGCACGAGGGCACGGGTTCACGGGTTCCCGGAGACGACATT
CGGCTACACTGCTGTTGCTGCCTTTCGTTCGCTCCGCCCACCGTCCTTCG
CCGTAACCATGGACCCAATCACCCTGGTAACGTTCATCTACCAGGCGGGC
AACGAGCTTGTTGAACGATGCGAGCTGGTCAAGCAATGCCACGCCGAGGC
AACCCGCATCGCTGTCCGGACTGTCCATGTCATGGGCTCGCTGGAGGAAG
CTTCAGCCGAGTTCTCAGGAAATGCCGGCATCAACGCAAGCCTTATTGAG
CTAAAGCGAGTGCTACAGGAAGCTCGGGATCTAGTGGAGGTAGAGGAGGG
CACGAGGGCACGGGTTCACGGGTTCCCGGAGACGACATTCGGCTACACTG
CTGTTGCTGCCTTTCGTTCGCTCCGCCCACCGTCCTTCGCCGTAACCATG
GACCCAATCACCCTGGTAACGTTCATCTACCAGGCGGGCAACGAGCTTGT
TGAACGATGCGAGCTGGTCAAGCAATGCCACGCCGAGGCAACCCGCATCG
CTGTCCGGACTGTCCATGTCATGGGCTCGCTGGAGGAAGCTTCAGCCGAG
TTCTCAGGAAATGCCGGCATCAACGCAAGCCTTATTGAGCTAAAGCGAGT
GCTACAGGAAGCTCGGGATCTAGTGGAGCGCTGCCAGCGCCCGAGGAGTC
TTGTCGTAAGAGCACGGTCAATAGGACGAGCCAATGTTAACAAGCGTGGG
CTCATCGACGTCGAGGCCCAGCTCCTACGTATCACGGGCGACCTTAACAT
ACCAATGCAAACCGATATCCGGAGGGCTATCACATCCGTTCAGCAACTTC
TCGATCCGGAAGGCGGCAGCGGGCATAGTGAGGCGCTGCAGGGAGCAGTG
CGACAGGTTATCCGCGAAGAACTTCAAGTTCGCAGCGCGCCTGGGCGACG
GTCGGTTCGTGACATCGTTGATGCCAAGCTTGCCAGCACGGGTACAGGCC
GGCCTACTAGTAGATCCCATGCCGCGGGTCAGGTGATGCTTCTCCTCGGT
CGTGTACACTTCGATAGGCTGGAAGAGGGAGAAGATATCCTCGGTGAAGG
GACGTTCGGTGTCGTCTACTCTGGCCAGTACATGGGGGAAGAGGTCGCCA
TCAAGAAGGCCCGCGGTATCGTCGGGGATCAAGCCGTGATGCGCGAGTTC
AGCGCTGCCAGCGCCCGAGGAGTCTTGTCGTAAGAGCACGGTCAATAGGA
CGAGCCAATGTTAACAAGCGTGGGCTCATCGACGTCGAGGCCCAGCTCCT
ACGTATCACGGGCGACCTTAACATACCAATGCAAACCGATATCCGGAGGG
CTATCACATCCGTTCAGCAACTTCTCGATCCGGAAGGCGGCAGCGGGCAT
AGTGAGGCGCTGCAGGGAGCAGTGCGACAGGTTATCCGCGAAGAACTTCA
AGTTCGCAGCGCGCCTGGGCGACGGTCGGTTCGTGACATCGTTGATGCCA
AGCTTGCCAGCACGGGTACAGGCCGGCCTACTAGTAGATCCCATGCCGCG
GGTCAGGTGATGCTTCTCCTCGGTCGTGTACACTTCGATAGGCTGGAAGA
GGGAGAAGATATCCTCGGTGAAGGGACGTTCGGTGTCGTCTACTCTGGCC
AGTACATGGGGGAAGAGGTCGCCATCAAGAAGGCCCGCGGTATCGTCGGG
GATCAAGCCGTGATGCGCGAGTTCAGGCGCGAAGCGGAAATTCATTTCGC
GCTACACCACGACAACATCGTCCGCGTCTTGGCTTTCAGCGAGGGGAGCG
CTGAACGCCCACCCTGCTTGGTGATGGAGCGTATGGAGGAATCACTATCC
AGCTTCTTGGGGGCAGTGAGGGTCCCACCACCGCTGCTCGAGCGCCTCGA
GATTATTCAGGACATTTGTCGGGCGCGAAGCGGAAATTCATTTCGCGCTA
CACCACGACAACATCGTCCGCGTCTTGGCTTTCAGCGAGGGGAGCGCTGA
ACGCCCACCCTGCTTGGTGATGGAGCGTATGGAGGAATCACTATCCAGCT
TCTTGGGGGCAGTGAGGGTCCCACCACCGCTGCTCGAGCGCCTCGAGATT
ATTCAGGACATTTGTCGGGGTCTACTCTTTCTTCACGAGCATCGTGTCAC
CCACCGTGATGTGAAAAGCCTCAACGTGCTACTCGACGAGGGAGGGACTG
CCAAGCTCTCCGACTTTGGCCTTGCGGCTTTAGTGGAAACCATGTCGAGG
AGCACTATTGCCAACACGCAATCGACGAGCGAACGCCCCGACATTGGCCA
CAAGGTATGAGGTCTACTCTTTCTTCACGAGCATCGTGTCACCCACCGTG
ATGTGAAAAGCCTCAACGTGCTACTCGACGAGGGAGGGACTGCCAAGCTC
TCCGACTTTGGCCTTGCGGCTTTAGTGGAAACCATGTCGAGGAGCACTAT
TGCCAACACGCAATCGACGAGCGAACGCCCCGACATTGGCCACAAGGTAT
GA
back to top