mRNA_S-firma_F_contig10734.993.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A352VGI6_9BACT (Uncharacterized protein (Fragment) n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A352VGI6_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.150e-8 Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 7 GRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPL 228
G P P+ D + DVD V+ + GADVNA G +A++W+A +G E+ E LL AGA +DV TPL
Sbjct: 22 GAPDAPVADAAMRGDVDAVRQLLREGADVNAAQGDGMSALHWAAEHGDPELTEMLLYAGATIDVVTRIGEYTPL 95
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A7Y3EDA9_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3EDA9_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.030e-7 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 7 GRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPLMGAA 240
G P P+ D + DV V+ + GADVNA G TA++W+A +G VE+ E L+ AG +D TP+M AA
Sbjct: 31 GNPEAPVADAAMREDVSEVRQLLQGGADVNAAQGDGMTALHWAARHGHVELAEMLVYAGGHLDAATRLGPYTPVMIAA 108
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A2E7ATP9_9BACT (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A2E7ATP9_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.030e-7 Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 22 PLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPLMGAAYNWRKDAVAFL 273
P+ D + D++ V+A + GADVNA G TA++WSA V +E LL AGA+++ TPL AA DAVA L
Sbjct: 35 PVADAAMREDINTVRALLREGADVNASQGDGMTALHWSALTDDVTTMEVLLYAGAVVEPMTRLGGYTPLHLAAMQGNGDAVARL 118
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A432S653_9AQUI (Uncharacterized protein n=2 Tax=Persephonella sp. TaxID=2060922 RepID=A0A432S653_9AQUI) HSP 1 Score: 55.1 bits (131), Expect = 1.190e-7 Identity = 27/82 (32.93%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 13 PSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPLMGAAYNWRKD 258
P L+ SK+ +++ VK IA+GA++NA+D G TA++W+ +YG +++ L+ GA + D +TP+ A +N + +
Sbjct: 27 PDRMLLTASKSGNIEYVKLAIAKGANLNAKDDKGSTALHWAVYYGYKDIVRLLIMQGANPYITDNY-GLTPIDVARFNQKTE 107
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A6N8VVY3_9GAMM (Uncharacterized protein (Fragment) n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N8VVY3_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 2.600e-7 Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 4 GGRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTP 225
GG P+ D + D++ V++ + GADVNA G TA++W+A G E+ + LL AGA +D G + TP
Sbjct: 29 GGWSDAPVADAAARGDLEAVRSLLREGADVNAPQGDGMTALHWAAERGDAELADVLLYAGARVDAGTRIGHYTP 102
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A6N8ZF40_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N8ZF40_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 2.650e-7 Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 4 GGRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTP 225
GG P+ D + D++ V++ + GADVNA G TA++W+A G E+ + LL AGA +D G + TP
Sbjct: 29 GGWSDAPVADAAARGDLEAVRSLLREGADVNAPQGDGMTALHWAAERGDAELADVLLYAGARVDAGTRIGHYTP 102
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A3L6QFS4_PANMI (Protein S-acyltransferase 24-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6QFS4_PANMI) HSP 1 Score: 55.1 bits (131), Expect = 9.030e-7 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 19 IPLIDYSKTADV--DGVKAEIA-RGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPLMGAAY 243
IP I S+ A + AE+ GADVNA DH G+TA++WSA G +++ E LL+ GA +D D T + A Y
Sbjct: 43 IPNIKISRPASCSNENCAAELKLHGADVNAIDHTGQTALHWSAVRGHIQVAELLLKEGAKVDAADLYGYQTTHVAAQY 120
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A523E9F1_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523E9F1_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 9.130e-7 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 13 PSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTP 225
PS P+ D++ D D V+ + +GADVNA G TA++W+A G EM E L+ AGA ++ + TP
Sbjct: 25 PSSPVADFATHGDRDAVRTLLQQGADVNAAQGDGMTALHWAAELGDAEMAEMLVYAGANVEAETRVGHYTP 95
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A7Y3I6N1_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3I6N1_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 9.140e-7 Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 1
Query: 7 GRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTPLMGAAYNWRKDAVAFL 273
G P+ D ++ D++ V+A + GADVNA G +A++W+A G +M+E L+ AGA ++ TPL A++ AV L
Sbjct: 40 GSVDAPVADAAERGDLEAVRALLRDGADVNASQGDGMSALHWAAMNGDADMIEVLVYAGATLEGTTRLGGYTPLHLASHRGLSAAVQAL 128
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Match: A0A381X0J2_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381X0J2_9ZZZZ) HSP 1 Score: 54.7 bits (130), Expect = 1.240e-6 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 13 PSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQVEMLEALLRAGALMDVGDTSDNMTP 225
P P+ D + D++GV+A + GADVNA G TA++W+A G +E+L+ LL AGA ++ + TP
Sbjct: 16 PDSPVADAAMRGDINGVQALLKNGADVNAAQGDGMTALHWAAESGDMEILKMLLYAGANLESVTRLGDYTP 86 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10734.993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10734.993.1 >prot_S-firma_F_contig10734.993.1 ID=prot_S-firma_F_contig10734.993.1|Name=mRNA_S-firma_F_contig10734.993.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=91bp MGGRPSIPLIDYSKTADVDGVKAEIARGADVNAQDHLGKTAVYWSAFYGQback to top mRNA from alignment at S-firma_F_contig10734:4641..4913- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10734.993.1 ID=mRNA_S-firma_F_contig10734.993.1|Name=mRNA_S-firma_F_contig10734.993.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=273bp|location=Sequence derived from alignment at S-firma_F_contig10734:4641..4913- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10734:4641..4913- >mRNA_S-firma_F_contig10734.993.1 ID=mRNA_S-firma_F_contig10734.993.1|Name=mRNA_S-firma_F_contig10734.993.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=546bp|location=Sequence derived from alignment at S-firma_F_contig10734:4641..4913- (Sphaerotrichia firma ET2_F female)back to top |