mRNA_S-firma_F_contig10732.990.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10732.990.1
Unique NamemRNA_S-firma_F_contig10732.990.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: H3GY03_PHYRM (Glycerophosphocholine phosphodiesterase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY03_PHYRM)

HSP 1 Score: 253 bits (645), Expect = 9.790e-72
Identity = 165/403 (40.94%), Postives = 228/403 (56.58%), Query Frame = 1
Query:    1 TATILPTHFSQ-SLGELRLPM-SAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPP--HKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQ-ERNLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            +A +LP+   +    +L +P+ SAG  +V  + T SY V+ PF HP NN+A VWR+YW++RP L IGHRG+GRS+ Q  GYR A  +ENTL SF  AGR GA+++EFDV LT DRVPVIYHDF + V L ++ A +L    E + +GIH +S+R L +  T  +   G K   L   ++KH   L          G   VP   H+P A     ++    L   +  P L  L   V   VG +IE+KYP       + N +  + IN Y+D +L  VF +AGSRR+FF+CF P I +ALRAKQ +YPVLFLT G     P A     +L  A      E+LQG+V++S A +E P+     + +   +++ WG  N N  +V+ Q+   VD VI DNV D I
Sbjct:  664 SAYLLPSQIGKHGEADLTVPIFSAGMSIVGQL-TLSYLVLTPFTHPKNNIANVWRSYWRERPPLTIGHRGMGRSYYQVDGYRLALTRENTLASFILAGRSGADFVEFDVQLTKDRVPVIYHDFLVNVGLEDKSAGSLGTKPETYEIGIHDMSFRQLTQSYTTPVPHKGGKSQQLQNRVKKHRARLQ---------GNKQVPSPKHEPLARSDDSASEEGHLVDFF--PRLEDLLKHVPAEVGLNIEVKYPDNFFRAAMRNLSC-FAINAYIDQVLQCVFDYAGSRRIFFSCFDPSICIALRAKQTKYPVLFLTYGSM--APDAMDARMTLQFATNLAKMENLQGIVSNSNAFLETPELAPLVKKDMGSVLITWGDQNTNHEMVQLQKRHAVDGVISDNVIDLI 1051          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: M4BDY4_HYAAE (Glycerophosphocholine phosphodiesterase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDY4_HYAAE)

HSP 1 Score: 248 bits (632), Expect = 6.560e-70
Identity = 159/400 (39.75%), Postives = 221/400 (55.25%), Query Frame = 1
Query:    1 TATILPTHFS-QSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            +A +LP+    Q   +L +P+ +    V   +T +Y V+ PF HP NN+A VWR+YW++RP L IGHRG+GRS  Q  GYR A  +ENTL SF  AGR GA+++EFDV LT D+VPVIYHDF + V L ++ A +     E + +GIH +++R L    T  +    +K   L + ++KH   L     + LS      P H P       +T    L   +  P L  L   V   VG +IE+KYP        M   + + IN Y+DTIL  VF  AGSRR+FF+CF P I VALR KQ +YPVLFLT G     P+      +L  A      E+LQG+V++S A++E P+     ++    +++ WG  N N  +V+ Q+   VD VI DNV D I
Sbjct:  670 SAFLLPSQIKKQEDSDLTVPIFSTNMDVIGQLTLAYLVLTPFAHPKNNIANVWRSYWRERPPLTIGHRGMGRSHYQVDGYRLALTRENTLASFILAGRSGADFVEFDVQLTKDKVPVIYHDFMVNVGLEDKSAGSFGTKSEMYEIGIHDMTFRQLTHAHTSPVPHKRSKSQTLQSRLKKHWARLQKDKQL-LS------PRHGPFTGHDTMATEEGHLVEFF--PRLKDLLKHVPAEVGLNIEVKYPDSFFHA-AMRSLSSFTINAYVDTILKCVFDHAGSRRIFFSCFDPSICVALRVKQTKYPVLFLTYGFM--APHTMDARMTLQFATNFAKMEELQGIVSNSDAIIETPELAPLVKKYLGTVLMTWGDQNTNHEMVQIQKRYAVDGVISDNVIDLI 1057          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A3M6VQM5_9STRA (Glycerophosphocholine phosphodiesterase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQM5_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.030e-69
Identity = 155/391 (39.64%), Postives = 224/391 (57.29%), Query Frame = 1
Query:   31 QSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAV--PPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYP--VGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGD 1173
            Q   +L +P+ +    +   ++ +Y V+ PF HP NN+A VWR+YW++RP L IGHRG+GRS+ Q  GYR A ++ENTL SF  AGR GA+++EFDV LT DRVPV+YHDF + V   ++ A +L    E + +GIH +S+R L +  T  +    +K   L   ++KH   L          G   V  P   P    +  +T    L   +  P L  L   V   VG +IEIKYP  +    +H M+  A   IN Y+D +L  VF +AGSRR+FF+CF+  + VALRAKQA+YPVLFLT G     P A     +L  A+     E+LQG+V++S+A++E P+ + F ++    +++ WG  N N  +V+ Q+   +D VI DNV D
Sbjct:  672 QGESDLTIPIFSVKMDIVGQLSLAYLVLTPFVHPKNNIANVWRSYWRERPPLTIGHRGMGRSYYQVDGYRLALIRENTLASFILAGRSGADFVEFDVQLTKDRVPVVYHDFTVNVAFEDKSAGSLGTKPEMYEIGIHDISFRQLTQSHTTPVPHKKSKNQVLQNRVKKHWARLQ---------GDKQVSSPIRGPLKDDNSIATEEDHLVEFF--PRLEDLLVHVPVEVGLNIEIKYPDKLLRPAMHSMSCFA---INDYIDRVLQCVFDYAGSRRIFFSCFNMSVCVALRAKQAKYPVLFLTYGSM--APNAMDARMTLQFAINFTKMENLQGIVSNSSALIETPELIPFVKKHLGTVLITWGDQNTNHEMVQLQKRHAIDGVISDNVID 1046          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A662YE75_9STRA (Glycerophosphocholine phosphodiesterase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE75_9STRA)

HSP 1 Score: 245 bits (626), Expect = 5.960e-69
Identity = 159/392 (40.56%), Postives = 216/392 (55.10%), Query Frame = 1
Query:   40 GELRLPMSA-GTG-----VVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQ-ERNLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            G++ LP+ A G G      +   +T +Y V+ PF HP NNLA VWR+YW++RP L IGHRG+GRS+ Q  G+R A  +ENTL SF  AGR GA+++EFDV LT DRVPVIYHDF L V L ++ A A     E + +GIH ++ R L +  +  +   GNKG  L   ++KH   L               PP       + E++    L   +  P L  L   V   VG ++EIKYP       + N    + +N Y+D IL  VF  AGSRR+FF+CF P I + LRAKQARYPVLFLT G     P+A     +L  AV     E LQG+V++S A ++ P      + +   +++ WG  N +   V+ Q+  G+DAVI DN  D I
Sbjct:  722 GDVTLPIFASGIGNEARHSIVGQITLTYQVLKPFTHPKNNLANVWRSYWRERPPLNIGHRGMGRSYYQVSGFRLALTRENTLASFILAGRSGADFVEFDVQLTKDRVPVIYHDFLLNVGLEDKRAGAFGTKPETYEIGIHDMTMRQLTQSYSEPVPHGGNKGKVLQTRVKKHWARLR-------GDKKNGSPPTTAVTRDAEETSEEDHLVDFF--PRLEDLLKHVPAEVGLNVEIKYPDNFFRATMRNSWT-FAMNEYIDRILQCVFDHAGSRRIFFSCFDPSICILLRAKQARYPVLFLTFGSM--APHAIDARMTLQFAVDVVKMEKLQGIVSNSNAFLDTPGLAPLVKKDMQAVLMTWGDQNTSHESVQLQKRRGIDAVISDNTIDLI 1101          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A0P1AFB6_PLAHL (Glycerophosphocholine phosphodiesterase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFB6_PLAHL)

HSP 1 Score: 244 bits (624), Expect = 8.700e-69
Identity = 158/402 (39.30%), Postives = 226/402 (56.22%), Query Frame = 1
Query:    1 TATILPTHF-SQSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKT----HHLRDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPY-ADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGD 1173
            +A +LP+   SQ   EL +P+ +    +    T SY  ++PF HP NN+A VWR+YW++RP L IGHRG+GRS+ Q  G+R A  +ENTL S   AGR GA+++EFDV LT DRVPVIYHDF + V L ++ A +     E + +GIH +S+R L +  T    HH   G++G  L   ++KH   L          G   +   +   P + + + S     +   P LA L   V   +G +IE+KYP        M   + + IN Y+D IL  VF FAGSRR+FF+CF P + +ALRAKQA+YPVLFLT G     P+  D R  +L  A+     E LQG+V++S A ++ P+     ++    +++ WG  N N  +V+ Q+   +D VI DNV D
Sbjct:  676 SAYLLPSQLNSQGEAELTIPIFSSELGIVGQFTLSYLTLIPFVHPKNNIANVWRSYWRERPPLTIGHRGMGRSYYQVNGHRLALTRENTLASLILAGRSGADFVEFDVQLTKDRVPVIYHDFLVHVGLEDKNAGSFGTKSETYEIGIHDMSFRQLTQSFTTPVPHH---GSEGKLLQKRVKKHWARLQ---------GDKKISSPR-RGPFTSDDSASDDDHLVEFFPRLADLLKHVPVEIGLNIEVKYPDPFFHA-TMRSLSCFAINGYVDKILQCVFDFAGSRRIFFSCFDPNVCIALRAKQAKYPVLFLTYGTLE--PHEVDARI-TLQFAINFAKMEKLQGIVSNSKAFIDTPELAPLVKKTLGTVLITWGDMNTNHEMVQLQKRYAIDGVISDNVID 1060          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A6A4DG63_9STRA (Glycerophosphocholine phosphodiesterase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DG63_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.500e-68
Identity = 156/401 (38.90%), Postives = 220/401 (54.86%), Query Frame = 1
Query:    1 TATILPTHFSQ-SLGELRLP-MSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            +A +LP+   +    +L +P + + TG+V  + T SY V+ PF HP NN+A VWR+YW++RP L IGHRG+GRS+ Q  GYR A  +ENTL SF  AGR GA+++EFDV LT DRVPVIYHDF + V L ++ A++     E + +GIH +S R L +  T  +   G K       ++KH   L          G   VP  + A     +         +   P L  L   V   VG +IEIKYP        M   + + IN YLD +L  VF +AG RR+FF+CF P + +ALRAKQ +YPVLFLT G     P+A     +L  A      E LQG+V++S + ++ P+     ++    +++ WG  N N  +V+ Q+   +D VI DNV D I
Sbjct:  646 SAYLLPSQIDKHGEADLTVPILHSATGLVGQL-TLSYLVLTPFSHPKNNIANVWRSYWRERPPLTIGHRGMGRSYYQVDGYRLALTRENTLASFILAGRSGADFVEFDVQLTKDRVPVIYHDFMVSVGLEDKGAQSFGTKSETYEIGIHDMSLRQLTQSYTTPVPHKGGKSQEFQKRVKKHWTRLQ---------GDKKVPSPRHALLSRDDDNAKEEGHLVDFFPRLEDLLKHVPAEVGLNIEIKYPDNFFRPG-MRSLSCFAINAYLDRVLECVFDYAGPRRIFFSCFDPSVCIALRAKQTKYPVLFLTYGSM--APHAMDARMTLQFATNFAKMEKLQGIVSNSDSFIDTPELAPLVKKALGTVLITWGDQNTNHEMVQLQKRHAIDGVISDNVIDLI 1033          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A0W8CYG1_PHYNI (Glycerophosphocholine phosphodiesterase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CYG1_PHYNI)

HSP 1 Score: 233 bits (595), Expect = 3.530e-68
Identity = 150/407 (36.86%), Postives = 219/407 (53.81%), Query Frame = 1
Query:    1 TATILPTHFS-QSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHIPEKTSQF 1200
            +A +LP+    Q   +L +P+ +    +   ++ SY  + PF HP NN+A VWR+YW++RP L IGHRG+GRS+ Q  G+R A  +ENTL S   AGR GA+++EFDV LT DRVPVIYHDF + V L ++ A +     E + +GIH +++R L +  T  +   G+K   L   ++KH   L          G   +P  +     S +S         +  P L  L   V   VG +IE+K+P        M   + + IN Y+D +L  VF FAG RR+FF+CF P + +ALRAKQA+YPVLFLT G     P A     +L  A      E LQGVV++S + +E P+     ++    +++ WG  N    +V+ Q+   +D VI DN+ D I +    F
Sbjct:  120 SAYLLPSQIDKQGEADLTIPILSSNEGIVGQLSLSYLALTPFIHPKNNIANVWRSYWRERPPLTIGHRGMGRSYYQVDGHRLALTRENTLASLILAGRSGADFVEFDVQLTKDRVPVIYHDFMVNVGLEDKSAGSFGTRPEKYEIGIHDMTFRQLTQSYTTPVPHKGSKTQLLQNRVKKHWARLQ---------GDKQIPSPRRGRLTSDDSANEEGHLVDF-FPRLEDLLKHVPAEVGLNIEVKFPDNYFNPG-MRSLSCFAINAYVDRLLQCVFDFAGPRRIFFSCFDPNVCIALRAKQAKYPVLFLTYGSM--APQAFDARMTLQFATNFAKMEKLQGVVSNSNSFLETPELAPLVKKYLGTVLITWGDQNTKHEMVQLQKRHAIDGVISDNIIDLINQDKKLF 513          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: G4ZH50_PHYSP (Glycerophosphocholine phosphodiesterase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZH50_PHYSP)

HSP 1 Score: 242 bits (617), Expect = 6.170e-68
Identity = 158/411 (38.44%), Postives = 219/411 (53.28%), Query Frame = 1
Query:    1 TATILPTHFSQ-SLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEAL----EAHRLGIHQLSWRALRRVKTHHL-RDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAA-----------LYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQER-NLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            +A +LP+   +    EL +P+      +   +T SY V+ PF HP NN+A VWR+YW++R  L IGHRG+GRS+ Q  GYR A  +ENTL SF  AGR GA+++EFDV LT DRVPVIYHDF + V L ++ A+A     E + +GIH +S R L +  T  +   G K       ++KH   L          G   +P            +P R L A           +   P L  L   V   VG +IEIKYP       + N +  + IN YLD +L  VF +AGSRR+FF+CF P + +ALRAKQ +YPVLFLT G     P+A     +L  A      E LQG+V++S + +E P+     ++    +++ WG  N N  +V+ Q+   +D VI DNV D I
Sbjct:  637 SAYLLPSQIGKHGEAELTVPIFHSAMGLVGQLTLSYLVLTPFSHPKNNIANVWRSYWRERLPLTIGHRGMGRSYYQVDGYRLALTRENTLASFILAGRSGADFVEFDVQLTKDRVPVIYHDFMVNVGLEDKGAQAFGTKSETYEIGIHDMSLRQLTQSHTTPVPHKGGKSQEFQKRVKKHWTRLQ---------GDKQLP------------SPRRALVANDDDVNEEGHLVDFFPRLEDLLKHVPAEVGLNIEIKYPDNFFRPGMRNLSC-FAINAYLDKVLQCVFDYAGSRRIFFSCFDPSVCIALRAKQTKYPVLFLTYGSM--APHAMDARMTLQFATNFAKMEKLQGIVSNSNSFIETPELAPLVKKALGTVLITWGDQNTNHEMVQLQKRHAIDGVISDNVIDLI 1023          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A5D6YBU3_9STRA (Glycerophosphocholine phosphodiesterase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBU3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 7.850e-68
Identity = 163/414 (39.37%), Postives = 225/414 (54.35%), Query Frame = 1
Query:    1 TATILPTHFS-QSLGELRLPM--SAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEA----LEAHRLGIHQLSWRALRRVKTHHLRDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAG-SRRVFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQERNLL-------------VLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHI 1179
            T  +LP+  S    G L LP+  SAG  VV  + T  + VI PF H  N +A+VWR+YW+ R  L +GHRG+GRSF Q  G+R A  +EN+L S   AGR GA+++EFDV LT DRVPV+YHDF L V L ++ A A     E + +GIH+L+ R L+R +T    +    + L   +RKH   + V    A    TA+            E+    ++      P L  L   V   VG +IEIKYP     +  M  +AP+ IN Y+D IL+ VF+ AG +RRVFF+CF P + V +RAKQA+YPVLFLT G    LP+A     +L  AV     E   G+V++S A +  P+ V+  + R +L             +L WG  N +   V+ Q+   +D VI DN+GD I
Sbjct:  290 TVLLLPSQLSAHGEGYLTLPIISSAGHDVVGQL-TLMFLVIKPFVHAKNTVASVWRSYWRPRVPLNVGHRGMGRSFHQVAGFRHALTRENSLASLILAGRSGADFVEFDVQLTRDRVPVLYHDFVLRVGLEDKHAWAHGARAEPYEVGIHELTLRQLQRSQTAPASNAKSKNVLQQRVRKHWTRV-VGATSARQSTTASETRWNATGDADSEADEEHLVEFF---PKLEDLLKHVPAEVGLNIEIKYPDNLWRL-AMRHSAPFAINEYVDAILTCVFEHAGENRRVFFSCFDPNLCVLVRAKQAKYPVLFLTYGSI--LPHAFDARMTLEFAVNLANMEKFGGIVSNSEAFLTNPELVQVVKRRRVLSGTGVTVAGTAKVLLTWGDKNTSHECVQLQKQHAMDGVISDNIGDLI 695          
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Match: A0A1V9Z288_9STRA (Glycerophosphocholine phosphodiesterase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z288_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.500e-67
Identity = 150/392 (38.27%), Postives = 206/392 (52.55%), Query Frame = 1
Query:    1 TATILPTHFSQSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAAVWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGAEYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEALEAHRLGIHQLSWRALRRVKTHHLRDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAAPPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLMNDAAPWDINTYLDTILSVVFKFAGSRR-VFFTCFHPEIVVALRAKQARYPVLFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQVKFAQERNLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGD 1173
            ++ ++ +   ++ G L LP+ +    V   +   Y  + PF H  N LA  +RT W     L +GHRG+GRS+ QA GYR + ++ENTL SF  AG  GA++IEFDV L+ DRVPVIYHDF  +  L +         + G+H L+   L+ V+  H +       L  LIRKH   L  +     +  T   P     AP       S+  A     PTL +L   V P VG +IEIKYPV   E   +   A +++N YLD IL+ VF  A  RR + F+CF P++ V LRAKQ RYPV FLT G   +    D+R  SLA AV     E LQG+V +S  +  QP  ++  ++  L +  WG  N   A V+ Q+  G+  VI DNVGD
Sbjct:  535 SSVLVASQLHRTNGALSLPLLSPAFDVVGELLLRYLHVRPFAHESNTLAEAFRTQWLHGQALDMGHRGLGRSYYQALGYRTSHIRENTLSSFVVAGLHGADWIEFDVQLSKDRVPVIYHDFFFKAALEDRRGRPGAFTKTGLHDLTLAQLQTVEWRHGKQATDVPRLQQLIRKHWYKLVKSKRPPPATATLQTPLTTTPAP-------SKWAALSEQFPTLENLLRHVPPYVGLNIEIKYPVDPPEAPALRSLAAFEMNAYLDDILACVFAHANGRRNIVFSCFEPDVCVMLRAKQVRYPVFFLTSGVEISGQVPDVRTLSLATAVPLAHMEGLQGIVTNSQPLFPQPRLIRCIRDLQLHLWTWGNHNTGHAKVQFQKKHGISGVISDNVGD 919          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10732.990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GY03_PHYRM9.790e-7240.94Glycerophosphocholine phosphodiesterase n=1 Tax=Ph... [more]
M4BDY4_HYAAE6.560e-7039.75Glycerophosphocholine phosphodiesterase n=1 Tax=Hy... [more]
A0A3M6VQM5_9STRA3.030e-6939.64Glycerophosphocholine phosphodiesterase n=2 Tax=Pe... [more]
A0A662YE75_9STRA5.960e-6940.56Glycerophosphocholine phosphodiesterase n=2 Tax=No... [more]
A0A0P1AFB6_PLAHL8.700e-6939.30Glycerophosphocholine phosphodiesterase n=1 Tax=Pl... [more]
A0A6A4DG63_9STRA3.500e-6838.90Glycerophosphocholine phosphodiesterase n=4 Tax=Ph... [more]
A0A0W8CYG1_PHYNI3.530e-6836.86Glycerophosphocholine phosphodiesterase n=1 Tax=Ph... [more]
G4ZH50_PHYSP6.170e-6838.44Glycerophosphocholine phosphodiesterase n=1 Tax=Ph... [more]
A0A5D6YBU3_9STRA7.850e-6839.37Glycerophosphocholine phosphodiesterase (Fragment)... [more]
A0A1V9Z288_9STRA3.500e-6738.27Glycerophosphocholine phosphodiesterase n=1 Tax=Ac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10732contigS-firma_F_contig10732:627..1973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog164328.Phyra82526
PFAMsCBM_20,GDPD,cNMP_binding
Max annot lvl4776|Peronosporales
Evalue1.61e-72
EggNOG OGsCOG0584@1|root,KOG2421@2759|Eukaryota,3Q8UG@4776|Peronosporales
DescriptionStarch binding domain
COG categoryC
Hectar predicted targeting categoryother localisation
Exons2
Model size1206
Cds size1206
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.6070838-CDS-S-firma_F_contig10732:626..12981622815614.6070838-CDS-S-firma_F_contig10732:626..1298Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10732 627..1298 -
1696949455.0960898-CDS-S-firma_F_contig10732:626..12981696949455.0960898-CDS-S-firma_F_contig10732:626..1298Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10732 627..1298 -
1622815614.6171257-CDS-S-firma_F_contig10732:1439..19731622815614.6171257-CDS-S-firma_F_contig10732:1439..1973Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10732 1440..1973 -
1696949455.1125093-CDS-S-firma_F_contig10732:1439..19731696949455.1125093-CDS-S-firma_F_contig10732:1439..1973Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10732 1440..1973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10732.990.1prot_S-firma_F_contig10732.990.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10732 627..1973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10732.990.1

>prot_S-firma_F_contig10732.990.1 ID=prot_S-firma_F_contig10732.990.1|Name=mRNA_S-firma_F_contig10732.990.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=402bp
TATILPTHFSQSLGELRLPMSAGTGVVCDVVTASYSVILPFRHPDNNLAA
VWRTYWKKRPMLRIGHRGVGRSFKQAPGYRKAALKENTLVSFATAGRMGA
EYIEFDVLLTADRVPVIYHDFELEVQLAEEMAEALEAHRLGIHQLSWRAL
RRVKTHHLRDGNKGSALAALIRKHMRSLAVAVAMALSLGTAAVPPHKPAA
PPSLESTPSRMLAALYSIPTLASLFTTVSPTVGFDIEIKYPVGAKEVHLM
NDAAPWDINTYLDTILSVVFKFAGSRRVFFTCFHPEIVVALRAKQARYPV
LFLTEGGCNNLPYADLRCQSLAAAVQHCLAEDLQGVVASSAAVVEQPDQV
KFAQERNLLVLGWGAANNNPAVVEEQRGLGVDAVIVDNVGDHIPEKTSQF
W*
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mRNA from alignment at S-firma_F_contig10732:627..1973-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10732.990.1 ID=mRNA_S-firma_F_contig10732.990.1|Name=mRNA_S-firma_F_contig10732.990.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1347bp|location=Sequence derived from alignment at S-firma_F_contig10732:627..1973- (Sphaerotrichia firma ET2_F female)
ACGGCCACCATCCTCCCCACCCACTTCTCCCAGTCCCTGGGCGAGCTCCG CCTGCCCATGTCCGCCGGTACCGGCGTCGTGTGCGACGTCGTCACCGCCT CCTACTCCGTCATCCTGCCCTTCCGCCACCCGGACAACAACCTCGCCGCC GTGTGGCGGACGTACTGGAAGAAGCGCCCCATGCTTCGTATCGGGCATCG GGGCGTGGGGCGGTCCTTCAAGCAAGCCCCCGGGTACCGCAAGGCGGCCC TGAAGGAGAACACGCTGGTGTCGTTTGCGACGGCGGGGCGCATGGGCGCG GAGTACATTGAGTTTGACGTGCTGCTGACGGCGGACCGTGTCCCCGTCAT TTACCACGACTTTGAGCTGGAGGTGCAGCTGGCGGAGGAAATGGCGGAGG CCCTGGAGGCCCACCGCCTGGGCATCCACCAGCTGTCCTGGCGGGCCCTG CGCCGCGTCAAGACACACCACCTGCGGGACGGCAACAAGGGCAGCGCCCT GGCCGCCCTCATCCGCAAGCACATGCGCAGCCTGGTGAAGCTGGGCTCCA AGACGCCGCCGCCCAGCCCGCCGCCCAGCCCGCCCCCCGCCGGCACCGGC AGCGCCGGCAGCACCGCCAAGGTGACCGCCGCCCCCAAGCCCGCCCCCCC CATGCTGCCCTCCGCCGAGTCCGAGGCGGTGGCCGTCGCCATGGCGCTGT CCCTGGGGACGGCGGCGGTGCCCCCCCACAAGCCCGCCGCTCCGCCCAGC CTGGAGTCCACGCCCTCCCGCATGCTTGCTGCCCTGTACTCCATCCCCAC CCTCGCCAGCTTGTTCACCACCGTCAGCCCCACCGTCGGGTTTGACATTG AAATCAAGTACCCGGTGGGCGCCAAGGAGGTCCACCTCATGAACGACGCC GCCCCCTGGGACATAAACACCTACCTGGACACCATCCTCAGCGTCGTGTT CAAGTTTGCCGGCAGCCGCCGCGTGTTCTTCACATGCTTCCACCCCGAAA TCGTGGTCGCCCTCCGCGCGAAGCAAGCCCGGTACCCGGTGCTGTTCCTC ACGGAAGGCGGCTGCAACAACCTCCCCTACGCCGACCTCCGCTGCCAGTC CCTGGCCGCCGCCGTGCAGCACTGCCTCGCGGAGGACCTCCAGGGTGTGG TGGCCTCCAGCGCCGCGGTCGTGGAGCAGCCCGACCAAGTCAAGTTTGCG CAGGAGCGCAACCTCCTCGTGTTGGGGTGGGGCGCCGCCAACAACAACCC CGCTGTGGTGGAGGAGCAGCGGGGCCTGGGCGTGGACGCCGTCATTGTGG ACAACGTGGGGGACCACATCCCGGAGAAAACGTCCCAGTTTTGGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10732:627..1973-

>mRNA_S-firma_F_contig10732.990.1 ID=mRNA_S-firma_F_contig10732.990.1|Name=mRNA_S-firma_F_contig10732.990.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2412bp|location=Sequence derived from alignment at S-firma_F_contig10732:627..1973- (Sphaerotrichia firma ET2_F female)
ACGGCCACCATCCTCCCCACCCACTTCTCCCAGTCCCTGGGCGAGCTCCG
CCTGCCCATGTCCGCCGGTACCGGCGTCGTGTGCGACGTCGTCACCGCCT
CCTACTCCGTCATCCTGCCCTTCCGCCACCCGGACAACAACCTCGCCGCC
GTGTGGCGGACGTACTGGAAGAAGCGCCCCATGCTTCGTATCGGGCATCG
GGGCGTGGGGCGGTCCTTCAAGCAAGCCCCCGGGTACCGCAAGGCGGCCC
TGAAGGAGAACACGCTGGTGTCGTTTGCGACGGCGGGGCGCATGGGCGCG
GAGTACATTGAGTTTGACGTGCTGCTGACGGCGGACCGTGTCCCCGTCAT
TTACCACGACTTTGAGCTGGAGGTGCAGCTGGCGGAGGAAATGGCGGAGG
CCCTGGAGGCCCACCGCCTGGGCATCCACCAGCTGTCCTGGCGGGCCCTG
CGCCGCGTCAAGACACACCACCTGCGGGACGGCAACAAGGGCAGCGCCCT
GGCCGCCCTCATCCGCAAGCACATGCGCAGCCTGACGGCCACCATCCTCC
CCACCCACTTCTCCCAGTCCCTGGGCGAGCTCCGCCTGCCCATGTCCGCC
GGTACCGGCGTCGTGTGCGACGTCGTCACCGCCTCCTACTCCGTCATCCT
GCCCTTCCGCCACCCGGACAACAACCTCGCCGCCGTGTGGCGGACGTACT
GGAAGAAGCGCCCCATGCTTCGTATCGGGCATCGGGGCGTGGGGCGGTCC
TTCAAGCAAGCCCCCGGGTACCGCAAGGCGGCCCTGAAGGAGAACACGCT
GGTGTCGTTTGCGACGGCGGGGCGCATGGGCGCGGAGTACATTGAGTTTG
ACGTGCTGCTGACGGCGGACCGTGTCCCCGTCATTTACCACGACTTTGAG
CTGGAGGTGCAGCTGGCGGAGGAAATGGCGGAGGCCCTGGAGGCCCACCG
CCTGGGCATCCACCAGCTGTCCTGGCGGGCCCTGCGCCGCGTCAAGACAC
ACCACCTGCGGGACGGCAACAAGGGCAGCGCCCTGGCCGCCCTCATCCGC
AAGCACATGCGCAGCCTGGCGGTGGCCGTCGCCATGGCGCTGTCCCTGGG
GACGGCGGCGGTGCCCCCCCACAAGCCCGCCGCTCCGCCCAGCCTGGAGT
CCACGCCCTCCCGCATGCTTGCTGCCCTGTACTCCATCCCCACCCTCGCC
AGCTTGTTCACCACCGTCAGCCCCACCGTCGGGTTTGACATTGAAATCAA
GTACCCGGTGGGCGCCAAGGAGGTCCACCTCATGAACGACGCCGCCCCCT
GGGACATAAACACCTACCTGGACACCATCCTCAGCGTCGTGTTCAAGTTT
GCCGGCAGCCGCCGCGTGTTCTTCACATGCTTCCACCCCGAAATCGTGGT
CGCCCTCCGCGCGAAGCAAGCCCGGTACCCGGTGCTGTTCCTCACGGAAG
GCGGCTGCAACAACCTCCCCTACGCCGACCTCCGCTGCCAGTCCCTGGCC
GCCGCCGTGCAGCACTGCCTCGCGGAGGACCTCCAGGGTGTGGTGGCCTC
CAGCGCCGCGGTCGTGGAGCAGCCCGACCAAGTCAAGTTTGCGCAGGAGC
GCAACCTCCTCGTGTTGGGGTGGGGCGCCGCCAACAACAACCCCGCTGTG
GTGGAGGAGCAGCGGGGCCTGGGCGTGGACGCCGTCATTGTGGACAACGT
GGGGGACCACATCCCGGAGAAAACGTCCCAGTTTTGGTGAGCGGTGGCCG
TCGCCATGGCGCTGTCCCTGGGGACGGCGGCGGTGCCCCCCCACAAGCCC
GCCGCTCCGCCCAGCCTGGAGTCCACGCCCTCCCGCATGCTTGCTGCCCT
GTACTCCATCCCCACCCTCGCCAGCTTGTTCACCACCGTCAGCCCCACCG
TCGGGTTTGACATTGAAATCAAGTACCCGGTGGGCGCCAAGGAGGTCCAC
CTCATGAACGACGCCGCCCCCTGGGACATAAACACCTACCTGGACACCAT
CCTCAGCGTCGTGTTCAAGTTTGCCGGCAGCCGCCGCGTGTTCTTCACAT
GCTTCCACCCCGAAATCGTGGTCGCCCTCCGCGCGAAGCAAGCCCGGTAC
CCGGTGCTGTTCCTCACGGAAGGCGGCTGCAACAACCTCCCCTACGCCGA
CCTCCGCTGCCAGTCCCTGGCCGCCGCCGTGCAGCACTGCCTCGCGGAGG
ACCTCCAGGGTGTGGTGGCCTCCAGCGCCGCGGTCGTGGAGCAGCCCGAC
CAAGTCAAGTTTGCGCAGGAGCGCAACCTCCTCGTGTTGGGGTGGGGCGC
CGCCAACAACAACCCCGCTGTGGTGGAGGAGCAGCGGGGCCTGGGCGTGG
ACGCCGTCATTGTGGACAACGTGGGGGACCACATCCCGGAGAAAACGTCC
CAGTTTTGGTGA
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