mRNA_S-firma_F_contig1073.988.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: D7FLP7_ECTSI (Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP7_ECTSI) HSP 1 Score: 365 bits (937), Expect = 1.950e-125 Identity = 195/248 (78.63%), Postives = 221/248 (89.11%), Query Frame = 1
Query: 1 KGVVKLVMNNPKANALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
KGVV+L M NPKANALG LISELE+AV +SRD SVR+VVLSS +PGVFCAGADLKERAVM++ EAELFVVRLRSLMS+VASIPAPTIA EGAAFGGGLELMLACD+RVVGA+A MGLTETSLGIIPGAGGTQRLPRLIGAS+AKELIFTARR+ A A +LGM N + AG AEK AL++AG++A RGPLAVRAAK AID+GL M D E+GM+IER++YA+VLGT+DRDEGLAAF+ERRPPEFTG
Sbjct: 12 KGVVRLEMKNPKANALGLKLISELEDAVEAVSRDGSVRSVVLSSGVPGVFCAGADLKERAVMTKPEAELFVVRLRSLMSKVASIPAPTIAVAEGAAFGGGLELMLACDVRVVGAKATMGLTETSLGIIPGAGGTQRLPRLIGASKAKELIFTARRVDAVRALELGMVNAVFDAGQAEKGALAMAGDMARRGPLAVRAAKLAIDEGLAMEDVEQGMAIERRLYARVLGTKDRDEGLAAFQERRPPEFTG 259
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A3D6EH44_9BACT (Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacterium TaxID=2052165 RepID=A0A3D6EH44_9BACT) HSP 1 Score: 258 bits (658), Expect = 4.990e-83 Identity = 145/248 (58.47%), Postives = 183/248 (73.79%), Query Frame = 1
Query: 4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
G+ L ++ P A NALG L+ E +A+ ++ D SVR VVL S +PGVFCAGADLKERA MS+ EAE FV LRS +++ +P P IA +EGAAFGGGLEL LA DLRV G A MGL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+ A EA +LG+ +++ AGGA AL++A EI GP+A+R AK A+ +GL M D + G++ E+ YA+VL T+DR EGLAAF+E+R P++ G
Sbjct: 14 GIFLLGLDRPAAKNALGRQLMGEFRQALADLRVDPSVRVVVLHSLVPGVFCAGADLKERAEMSQAEAEAFVQGLRSAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGTGAKMGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIDAVEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKQAVSRGLDM-DRDAGLAFEQACYAQVLPTKDRLEGLAAFREKRKPQYRG 260
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI00040C1ED4 (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix fermentans TaxID=44676 RepID=UPI00040C1ED4) HSP 1 Score: 257 bits (657), Expect = 7.070e-83 Identity = 142/248 (57.26%), Postives = 185/248 (74.60%), Query Frame = 1
Query: 4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
G+V L ++ P A NALG L++E +A+ ++ D + R +V+ S +PGVFCAGADLKERA MS+ EA FV LR +++ +P P +AA+EGAAFGGGLEL LA DLR+ GAEA MGL ETSL IIPGAGGTQRLPRLIGA+RAKELIFTARRL A EA +LG+ +++ AGGA AL++A EI GP+A+R AK A+++GL M D G++ ER YA+V+ T+DR EGLAAF+E+R P++ G
Sbjct: 14 GIVLLGLDRPAAKNALGRQLMTEFRQALADLRSDPAARVLVVHSLVPGVFCAGADLKERAGMSQAEAATFVQGLRDAFTELEDLPMPVLAALEGAAFGGGLELALAADLRIAGAEARMGLVETSLAIIPGAGGTQRLPRLIGAARAKELIFTARRLDAAEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKLAVNRGLEM-DRNSGLAFERACYAQVIPTKDRLEGLAAFREKRKPQYRG 260
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI001FADA3A0 (enoyl-CoA hydratase-related protein n=5 Tax=unclassified Geothrix TaxID=2647902 RepID=UPI001FADA3A0) HSP 1 Score: 254 bits (649), Expect = 1.150e-81 Identity = 141/248 (56.85%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
G+V L ++ P+A NALG L++E +A+ ++ D +VR VV+ S +PGVFCAGADLKERA M+ E FV LRS +++ +P P IA +EGAAFGGGLEL LA DLRV G +A +GL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+GA EA +LG+ +++V AGGA AL++A EI GP+A+R AK A+ +GL M D + G++ E+ YA+V+ T+DR EGLAAF+E+R P++ G
Sbjct: 14 GLVLLGLDRPEAKNALGRQLMAEFRQALADLRFDPAVRVVVMHSLVPGVFCAGADLKERAGMAPAETAAFVHGLRSAFTELEDLPVPVIAVLEGAAFGGGLELALAADLRVAGTDAKLGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIGAEEAGRLGIVDRVVPAGGALDAALALAREILPNGPVALRMAKLAVSRGLEM-DRDSGLAFEQACYAQVIPTKDRLEGLAAFREKRKPQYRG 260
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A8J8HM76_9BACT (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Geothrix sp. TaxID=1962974 RepID=A0A8J8HM76_9BACT) HSP 1 Score: 252 bits (643), Expect = 9.360e-81 Identity = 145/248 (58.47%), Postives = 180/248 (72.58%), Query Frame = 1
Query: 4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
G+V L ++ P A NALG L+ E EA+ ++ D +VR VV+ S +PGVFCAGADLKERA MS EA FV +R+ S + +P P IAA+EGAAFGGGLEL LA DLRV GAEA MGL ET+L IIPG GGTQRLPRLIG +RAKELIFTARR GA EA +LG+ N +V AG A + AL +A EI GP+A+R AK A+ QGL + D G+++E YA+V+ TQDR EGLAAF+E+R P++ G
Sbjct: 14 GIVLLGLDRPAAKNALGRQLLREFLEALRVLAADAAVRVVVVHSLVPGVFCAGADLKERAEMSAAEAAGFVQGIRACFSDLERLPMPVIAALEGAAFGGGLELALAADLRVAGAEAKMGLVETALAIIPGGGGTQRLPRLIGVARAKELIFTARRFGAEEAGRLGLVNCVVPAGQALEAALGLAREILPNGPVALRMAKQAVSQGLDL-DLASGLALEEACYAQVIPTQDRLEGLAAFREKRKPQYKG 260
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI001FABCD0D (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix sp. SG189 TaxID=2922721 RepID=UPI001FABCD0D) HSP 1 Score: 251 bits (641), Expect = 1.880e-80 Identity = 137/248 (55.24%), Postives = 185/248 (74.60%), Query Frame = 1
Query: 4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
G+V L ++ P A NALG L++E +A+ ++ D + R VV+ S +PGVFCAGADLKERA MS+ E FV LR +++ +P P IA +EGAAFGGGLEL LA DLRV GAEA +GL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+GA +A +LG+ +++ AGGA AL++A EI GP+A+R AK A+++G+ + D + G++ E+ YA+V+ T+DR EGLAAF+++R P++ G
Sbjct: 14 GIVLLGLDRPAAKNALGRQLMAEFRQALADLRFDPAARVVVVHSLVPGVFCAGADLKERAGMSQGETVTFVHGLRGAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGAEAKLGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIGAADAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKLAVNRGVAL-DRDSGLAFEQACYAQVIPTKDRLEGLAAFRDKRKPQYRG 260
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A1U7QSM9_MESAU (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=11 Tax=Muroidea TaxID=337687 RepID=A0A1U7QSM9_MESAU) HSP 1 Score: 249 bits (637), Expect = 2.330e-79 Identity = 137/253 (54.15%), Postives = 180/253 (71.15%), Query Frame = 1
Query: 1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAG----GAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
+G+ +++MN P A NALG +SEL EA+ ++ D+ VR ++ SA+ GVFCAGADLKER MS E +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLR+ + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RRL +AH+LG+ N V A AL++A EI + P+AVR K AID+G+ + D GM+IE YA+ + TQDR EG+AAF+E+RPP+F G
Sbjct: 44 EGITEVLMNRPHARNALGKVFVSELLEALAQLREDQQVRVLIFRSAVKGVFCAGADLKEREQMSATEVAIFVQRLRGLMSEIATFPAPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGMQAHELGLVNHAVAQNEEGDAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEHMCYAQNIPTQDRLEGMAAFREKRPPKFVG 295
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A8C2LEG9_CRIGR (Enoyl-CoA hydratase domain containing 2 n=6 Tax=Muroidea TaxID=337687 RepID=A0A8C2LEG9_CRIGR) HSP 1 Score: 249 bits (637), Expect = 2.330e-79 Identity = 137/253 (54.15%), Postives = 180/253 (71.15%), Query Frame = 1
Query: 1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVG----AGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
KG+ +++MN P A NALG +SEL EA+ ++ D+ VR ++ SA+ GVFCAGADLKER MS E +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLR+ + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RR+ +AH+LG+ N V A AL++A EI + P+AVR K AID+G+ + D GM+IE YA+ + TQDR EG+AAF+E+RPP+F G
Sbjct: 44 KGITEVLMNRPHARNALGNVFVSELLEALAQLREDQQVRVLIFRSAVKGVFCAGADLKEREQMSAVEVGIFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRVNGMQAHELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEHMCYAQNIPTQDRLEGMAAFREKRPPKFVG 295
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A6U3BPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BPQ0_9EUKA) HSP 1 Score: 248 bits (633), Expect = 9.080e-79 Identity = 139/253 (54.94%), Postives = 181/253 (71.54%), Query Frame = 1
Query: 1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLV----GAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
+G+V+L MN PKA NALG NL+ +EE + E+ D+SVR VV+ SA PG+FCAGADLKERA M +E FV RLR L+S ++ +P P IAA++GAA GGGLE+ LACDLRV +EA MGL ET L IIPGAGGTQRLPRL+G + AKELIFTAR + EA ++G+ NK V A AL++A EI GP+ V+ K AI++GL + E G++ E+ YA+V+ T+DR EGLAAF+E+R P++TG
Sbjct: 43 EGIVELAMNRPKARNALGKNLVGMMEETLSELKFDKSVRVVVVRSANPGMFCAGADLKERAAMPPEEVGPFVARLRGLVSSISDMPMPVIAAIDGAALGGGLEMALACDLRVASSEAKMGLVETRLAIIPGAGGTQRLPRLVGPAIAKELIFTARVIDGEEAGRIGLVNKAVPQNDDGDAATSAALALAQEIIPNGPIGVQMGKLAINKGLEV-PLESGLAFEQGCYAQVIPTKDRLEGLAAFREKRKPQYTG 294
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A286Y2D3_CAVPO (Enoyl-CoA hydratase domain containing 2 n=7 Tax=Hystricomorpha TaxID=33550 RepID=A0A286Y2D3_CAVPO) HSP 1 Score: 248 bits (632), Expect = 1.170e-78 Identity = 137/253 (54.15%), Postives = 181/253 (71.54%), Query Frame = 1
Query: 1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAG----GAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
+G+ +++MN P A NALG+ +SEL+ AV ++ D+ VR ++L SA+ GVFCAGADLKER MS E +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLRV + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RRL +AH LG+ N V A + A ++A EI + P+AVR K AID+G+ + D GM+IE YA+ + T+DR EG+AAF+E+RPP+F G
Sbjct: 40 QGITEILMNRPGARNALGYVFVSELQNAVAQLREDQRVRVLLLRSAVKGVFCAGADLKEREQMSATEVGVFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASTAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLTGVQAHTLGLVNHTVEQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEEMCYAQNIPTRDRLEGMAAFREKRPPKFVG 291 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1073.988.1 >prot_S-firma_F_contig1073.988.1 ID=prot_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=243bp MNNPKANALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKback to top mRNA from alignment at S-firma_F_contig1073:22418..25397- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1073.988.1 ID=mRNA_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2980bp|location=Sequence derived from alignment at S-firma_F_contig1073:22418..25397- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1073:22418..25397- >mRNA_S-firma_F_contig1073.988.1 ID=mRNA_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1458bp|location=Sequence derived from alignment at S-firma_F_contig1073:22418..25397- (Sphaerotrichia firma ET2_F female)back to top |