mRNA_S-firma_F_contig1073.988.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1073.988.1
Unique NamemRNA_S-firma_F_contig1073.988.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: D7FLP7_ECTSI (Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP7_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.950e-125
Identity = 195/248 (78.63%), Postives = 221/248 (89.11%), Query Frame = 1
Query:    1 KGVVKLVMNNPKANALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            KGVV+L M NPKANALG  LISELE+AV  +SRD SVR+VVLSS +PGVFCAGADLKERAVM++ EAELFVVRLRSLMS+VASIPAPTIA  EGAAFGGGLELMLACD+RVVGA+A MGLTETSLGIIPGAGGTQRLPRLIGAS+AKELIFTARR+ A  A +LGM N +  AG AEK AL++AG++A RGPLAVRAAK AID+GL M D E+GM+IER++YA+VLGT+DRDEGLAAF+ERRPPEFTG
Sbjct:   12 KGVVRLEMKNPKANALGLKLISELEDAVEAVSRDGSVRSVVLSSGVPGVFCAGADLKERAVMTKPEAELFVVRLRSLMSKVASIPAPTIAVAEGAAFGGGLELMLACDVRVVGAKATMGLTETSLGIIPGAGGTQRLPRLIGASKAKELIFTARRVDAVRALELGMVNAVFDAGQAEKGALAMAGDMARRGPLAVRAAKLAIDEGLAMEDVEQGMAIERRLYARVLGTKDRDEGLAAFQERRPPEFTG 259          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A3D6EH44_9BACT (Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacterium TaxID=2052165 RepID=A0A3D6EH44_9BACT)

HSP 1 Score: 258 bits (658), Expect = 4.990e-83
Identity = 145/248 (58.47%), Postives = 183/248 (73.79%), Query Frame = 1
Query:    4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            G+  L ++ P A NALG  L+ E  +A+ ++  D SVR VVL S +PGVFCAGADLKERA MS+ EAE FV  LRS  +++  +P P IA +EGAAFGGGLEL LA DLRV G  A MGL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+ A EA +LG+ +++  AGGA   AL++A EI   GP+A+R AK A+ +GL M D + G++ E+  YA+VL T+DR EGLAAF+E+R P++ G
Sbjct:   14 GIFLLGLDRPAAKNALGRQLMGEFRQALADLRVDPSVRVVVLHSLVPGVFCAGADLKERAEMSQAEAEAFVQGLRSAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGTGAKMGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIDAVEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKQAVSRGLDM-DRDAGLAFEQACYAQVLPTKDRLEGLAAFREKRKPQYRG 260          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI00040C1ED4 (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix fermentans TaxID=44676 RepID=UPI00040C1ED4)

HSP 1 Score: 257 bits (657), Expect = 7.070e-83
Identity = 142/248 (57.26%), Postives = 185/248 (74.60%), Query Frame = 1
Query:    4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            G+V L ++ P A NALG  L++E  +A+ ++  D + R +V+ S +PGVFCAGADLKERA MS+ EA  FV  LR   +++  +P P +AA+EGAAFGGGLEL LA DLR+ GAEA MGL ETSL IIPGAGGTQRLPRLIGA+RAKELIFTARRL A EA +LG+ +++  AGGA   AL++A EI   GP+A+R AK A+++GL M D   G++ ER  YA+V+ T+DR EGLAAF+E+R P++ G
Sbjct:   14 GIVLLGLDRPAAKNALGRQLMTEFRQALADLRSDPAARVLVVHSLVPGVFCAGADLKERAGMSQAEAATFVQGLRDAFTELEDLPMPVLAALEGAAFGGGLELALAADLRIAGAEARMGLVETSLAIIPGAGGTQRLPRLIGAARAKELIFTARRLDAAEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKLAVNRGLEM-DRNSGLAFERACYAQVIPTKDRLEGLAAFREKRKPQYRG 260          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI001FADA3A0 (enoyl-CoA hydratase-related protein n=5 Tax=unclassified Geothrix TaxID=2647902 RepID=UPI001FADA3A0)

HSP 1 Score: 254 bits (649), Expect = 1.150e-81
Identity = 141/248 (56.85%), Postives = 186/248 (75.00%), Query Frame = 1
Query:    4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            G+V L ++ P+A NALG  L++E  +A+ ++  D +VR VV+ S +PGVFCAGADLKERA M+  E   FV  LRS  +++  +P P IA +EGAAFGGGLEL LA DLRV G +A +GL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+GA EA +LG+ +++V AGGA   AL++A EI   GP+A+R AK A+ +GL M D + G++ E+  YA+V+ T+DR EGLAAF+E+R P++ G
Sbjct:   14 GLVLLGLDRPEAKNALGRQLMAEFRQALADLRFDPAVRVVVMHSLVPGVFCAGADLKERAGMAPAETAAFVHGLRSAFTELEDLPVPVIAVLEGAAFGGGLELALAADLRVAGTDAKLGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIGAEEAGRLGIVDRVVPAGGALDAALALAREILPNGPVALRMAKLAVSRGLEM-DRDSGLAFEQACYAQVIPTKDRLEGLAAFREKRKPQYRG 260          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A8J8HM76_9BACT (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Geothrix sp. TaxID=1962974 RepID=A0A8J8HM76_9BACT)

HSP 1 Score: 252 bits (643), Expect = 9.360e-81
Identity = 145/248 (58.47%), Postives = 180/248 (72.58%), Query Frame = 1
Query:    4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            G+V L ++ P A NALG  L+ E  EA+  ++ D +VR VV+ S +PGVFCAGADLKERA MS  EA  FV  +R+  S +  +P P IAA+EGAAFGGGLEL LA DLRV GAEA MGL ET+L IIPG GGTQRLPRLIG +RAKELIFTARR GA EA +LG+ N +V AG A + AL +A EI   GP+A+R AK A+ QGL + D   G+++E   YA+V+ TQDR EGLAAF+E+R P++ G
Sbjct:   14 GIVLLGLDRPAAKNALGRQLLREFLEALRVLAADAAVRVVVVHSLVPGVFCAGADLKERAEMSAAEAAGFVQGIRACFSDLERLPMPVIAALEGAAFGGGLELALAADLRVAGAEAKMGLVETALAIIPGGGGTQRLPRLIGVARAKELIFTARRFGAEEAGRLGLVNCVVPAGQALEAALGLAREILPNGPVALRMAKQAVSQGLDL-DLASGLALEEACYAQVIPTQDRLEGLAAFREKRKPQYKG 260          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: UPI001FABCD0D (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix sp. SG189 TaxID=2922721 RepID=UPI001FABCD0D)

HSP 1 Score: 251 bits (641), Expect = 1.880e-80
Identity = 137/248 (55.24%), Postives = 185/248 (74.60%), Query Frame = 1
Query:    4 GVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            G+V L ++ P A NALG  L++E  +A+ ++  D + R VV+ S +PGVFCAGADLKERA MS+ E   FV  LR   +++  +P P IA +EGAAFGGGLEL LA DLRV GAEA +GL ET+L IIPGAGGTQRLPRLIGASRAKELIFTARR+GA +A +LG+ +++  AGGA   AL++A EI   GP+A+R AK A+++G+ + D + G++ E+  YA+V+ T+DR EGLAAF+++R P++ G
Sbjct:   14 GIVLLGLDRPAAKNALGRQLMAEFRQALADLRFDPAARVVVVHSLVPGVFCAGADLKERAGMSQGETVTFVHGLRGAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGAEAKLGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIGAADAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKLAVNRGVAL-DRDSGLAFEQACYAQVIPTKDRLEGLAAFRDKRKPQYRG 260          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A1U7QSM9_MESAU (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=11 Tax=Muroidea TaxID=337687 RepID=A0A1U7QSM9_MESAU)

HSP 1 Score: 249 bits (637), Expect = 2.330e-79
Identity = 137/253 (54.15%), Postives = 180/253 (71.15%), Query Frame = 1
Query:    1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAG----GAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            +G+ +++MN P A NALG   +SEL EA+ ++  D+ VR ++  SA+ GVFCAGADLKER  MS  E  +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLR+  + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RRL   +AH+LG+ N  V        A   AL++A EI  + P+AVR  K AID+G+ + D   GM+IE   YA+ + TQDR EG+AAF+E+RPP+F G
Sbjct:   44 EGITEVLMNRPHARNALGKVFVSELLEALAQLREDQQVRVLIFRSAVKGVFCAGADLKEREQMSATEVAIFVQRLRGLMSEIATFPAPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGMQAHELGLVNHAVAQNEEGDAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEHMCYAQNIPTQDRLEGMAAFREKRPPKFVG 295          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A8C2LEG9_CRIGR (Enoyl-CoA hydratase domain containing 2 n=6 Tax=Muroidea TaxID=337687 RepID=A0A8C2LEG9_CRIGR)

HSP 1 Score: 249 bits (637), Expect = 2.330e-79
Identity = 137/253 (54.15%), Postives = 180/253 (71.15%), Query Frame = 1
Query:    1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVG----AGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            KG+ +++MN P A NALG   +SEL EA+ ++  D+ VR ++  SA+ GVFCAGADLKER  MS  E  +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLR+  + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RR+   +AH+LG+ N  V        A   AL++A EI  + P+AVR  K AID+G+ + D   GM+IE   YA+ + TQDR EG+AAF+E+RPP+F G
Sbjct:   44 KGITEVLMNRPHARNALGNVFVSELLEALAQLREDQQVRVLIFRSAVKGVFCAGADLKEREQMSAVEVGIFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRVNGMQAHELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEHMCYAQNIPTQDRLEGMAAFREKRPPKFVG 295          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A6U3BPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BPQ0_9EUKA)

HSP 1 Score: 248 bits (633), Expect = 9.080e-79
Identity = 139/253 (54.94%), Postives = 181/253 (71.54%), Query Frame = 1
Query:    1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLV----GAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            +G+V+L MN PKA NALG NL+  +EE + E+  D+SVR VV+ SA PG+FCAGADLKERA M  +E   FV RLR L+S ++ +P P IAA++GAA GGGLE+ LACDLRV  +EA MGL ET L IIPGAGGTQRLPRL+G + AKELIFTAR +   EA ++G+ NK V        A   AL++A EI   GP+ V+  K AI++GL +   E G++ E+  YA+V+ T+DR EGLAAF+E+R P++TG
Sbjct:   43 EGIVELAMNRPKARNALGKNLVGMMEETLSELKFDKSVRVVVVRSANPGMFCAGADLKERAAMPPEEVGPFVARLRGLVSSISDMPMPVIAAIDGAALGGGLEMALACDLRVASSEAKMGLVETRLAIIPGAGGTQRLPRLVGPAIAKELIFTARVIDGEEAGRIGLVNKAVPQNDDGDAATSAALALAQEIIPNGPIGVQMGKLAINKGLEV-PLESGLAFEQGCYAQVIPTKDRLEGLAAFREKRKPQYTG 294          
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Match: A0A286Y2D3_CAVPO (Enoyl-CoA hydratase domain containing 2 n=7 Tax=Hystricomorpha TaxID=33550 RepID=A0A286Y2D3_CAVPO)

HSP 1 Score: 248 bits (632), Expect = 1.170e-78
Identity = 137/253 (54.15%), Postives = 181/253 (71.54%), Query Frame = 1
Query:    1 KGVVKLVMNNPKA-NALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLKERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLACDLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLGATEAHKLGMANKLVGAG----GAEKEALSIAGEIATRGPLAVRAAKAAIDQGLVMADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTG 744
            +G+ +++MN P A NALG+  +SEL+ AV ++  D+ VR ++L SA+ GVFCAGADLKER  MS  E  +FV RLR LMS++A+ PAPTIAA++G A GGGLEL LACDLRV  + AVMGL ET+ G++PGAGGTQRLPR +G + AKELIFT RRL   +AH LG+ N  V        A + A ++A EI  + P+AVR  K AID+G+ + D   GM+IE   YA+ + T+DR EG+AAF+E+RPP+F G
Sbjct:   40 QGITEILMNRPGARNALGYVFVSELQNAVAQLREDQRVRVLLLRSAVKGVFCAGADLKEREQMSATEVGVFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASTAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLTGVQAHTLGLVNHTVEQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGMEV-DIASGMAIEEMCYAQNIPTRDRLEGMAAFREKRPPKFVG 291          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1073.988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP7_ECTSI1.950e-12578.63Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A3D6EH44_9BACT4.990e-8358.47Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacteriu... [more]
UPI00040C1ED47.070e-8357.26enoyl-CoA hydratase-related protein n=1 Tax=Geothr... [more]
UPI001FADA3A01.150e-8156.85enoyl-CoA hydratase-related protein n=5 Tax=unclas... [more]
A0A8J8HM76_9BACT9.360e-8158.47Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
UPI001FABCD0D1.880e-8055.24enoyl-CoA hydratase-related protein n=1 Tax=Geothr... [more]
A0A1U7QSM9_MESAU2.330e-7954.15enoyl-CoA hydratase domain-containing protein 2, m... [more]
A0A8C2LEG9_CRIGR2.330e-7954.15Enoyl-CoA hydratase domain containing 2 n=6 Tax=Mu... [more]
A0A6U3BPQ0_9EUKA9.080e-7954.94Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A286Y2D3_CAVPO1.170e-7854.15Enoyl-CoA hydratase domain containing 2 n=7 Tax=Hy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1073contigS-firma_F_contig1073:22418..25397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FLP7
PFAMsECH_1
Max annot lvl2759|Eukaryota
KEGG rclassRC02416
KEGG koko:K05607
KEGG ReactionR02085
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Evalue1.55e-122
EggNOG OGsCOG1024@1|root,KOG1679@2759|Eukaryota
EC4.2.1.18
Descriptionmethylglutaconyl-CoA hydratase activity
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionenoyl-CoA hydratase
Ec32 orthologEc-17_000320.1
Exons5
Model size750
Cds size729
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1073.988.1prot_S-firma_F_contig1073.988.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1073 22418..25376 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.4505863-CDS-S-firma_F_contig1073:22417..225431622815614.4505863-CDS-S-firma_F_contig1073:22417..22543Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 22418..22543 -
1696949454.9674222-CDS-S-firma_F_contig1073:22417..225431696949454.9674222-CDS-S-firma_F_contig1073:22417..22543Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 22418..22543 -
1622815614.4660444-CDS-S-firma_F_contig1073:23334..235341622815614.4660444-CDS-S-firma_F_contig1073:23334..23534Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 23335..23534 -
1696949454.9843159-CDS-S-firma_F_contig1073:23334..235341696949454.9843159-CDS-S-firma_F_contig1073:23334..23534Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 23335..23534 -
1622815614.4794893-CDS-S-firma_F_contig1073:24000..241441622815614.4794893-CDS-S-firma_F_contig1073:24000..24144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 24001..24144 -
1696949454.9973624-CDS-S-firma_F_contig1073:24000..241441696949454.9973624-CDS-S-firma_F_contig1073:24000..24144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 24001..24144 -
1622815614.493279-CDS-S-firma_F_contig1073:24471..246821622815614.493279-CDS-S-firma_F_contig1073:24471..24682Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 24472..24682 -
1696949455.0140123-CDS-S-firma_F_contig1073:24471..246821696949455.0140123-CDS-S-firma_F_contig1073:24471..24682Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 24472..24682 -
1622815614.508031-CDS-S-firma_F_contig1073:25328..253761622815614.508031-CDS-S-firma_F_contig1073:25328..25376Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 25329..25376 -
1696949455.0310435-CDS-S-firma_F_contig1073:25328..253761696949455.0310435-CDS-S-firma_F_contig1073:25328..25376Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1073 25329..25376 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.5243146-UTR-S-firma_F_contig1073:25376..253971622815614.5243146-UTR-S-firma_F_contig1073:25376..25397Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1073 25377..25397 -
1696949455.0495646-UTR-S-firma_F_contig1073:25376..253971696949455.0495646-UTR-S-firma_F_contig1073:25376..25397Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1073 25377..25397 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1073.988.1

>prot_S-firma_F_contig1073.988.1 ID=prot_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=243bp
MNNPKANALGFNLISELEEAVGEISRDESVRAVVLSSALPGVFCAGADLK
ERAVMSRQEAELFVVRLRSLMSQVASIPAPTIAAVEGAAFGGGLELMLAC
DLRVVGAEAVMGLTETSLGIIPGAGGTQRLPRLIGASRAKELIFTARRLG
ATEAHKLGMANKLVGAGGAEKEALSIAGEIATRGPLAVRAAKAAIDQGLV
MADAERGMSIERKMYAKVLGTQDRDEGLAAFKERRPPEFTGN*
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mRNA from alignment at S-firma_F_contig1073:22418..25397-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1073.988.1 ID=mRNA_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2980bp|location=Sequence derived from alignment at S-firma_F_contig1073:22418..25397- (Sphaerotrichia firma ET2_F female)
AAAGGAGTGGTGAAGTTAGTGATGAACAACCCGAAGGCCAACGCGCTGGG CTTCAACCTCATCTCGGAGGTAGGTGATCAATAACAATGCACTTTTCCGC CTTCGCAAGCCTTGAGACGCCACCATGCCCCGCTGGGCCGATATTTGCTT CCCGAACTCCCGATTGCCGCTGCAGCCCCCGCAGCACGGACAGAGAGGTA CCGATACGGCTGGTTTATGTCTGTTTACTCAAGCCTATGTATTTCGAGTA ACTACTGCTACCGAATATGATACTTGTACCAAATAACCCACGCGCTTTTT CGGTAGTCTTAAGTATACGATACCTCTGCGCGCAGTACAAACCCGATATA TTTTCCCGAACGCCCGTGCTCAAGTCTACGTACCCTATGAGAGATGAAAG TCTGCGTTTCGATTTTGTCACCCGCACCACCCAGCCCCAACCAACAAAAC GCGACTGTTCTATGTTGTCCACCCTCGACTGAGACGAGCTCTCACGCTGT ATTTTTCCTCTAAATTACCCTTAGCGCAAGAGCCGAATTTCGTGGAAGCG AGAACCCCGGCCACCCCCCGACAGAACGATACGCCAATTTTACCACCTTC AAGAGAACCAGCAATCCGATTTTTTACCCCCCCTCGCTCCTGCCACCCTC ACGAAAAAACATCCCTTGAACACCACCGTAAAACTAACGTCAATATCACC CCGCATCCAACGCAGCTAGAGGAAGCGGTCGGAGAAATCTCTCGGGACGA GTCCGTCCGAGCCGTGGTGCTCAGCAGCGCCCTCCCCGGGGTGTTCTGCG CTGGCGCCGACCTGAAGGAGCGGGCGGTCATGTCGAGGCAGGAGGCCGAG CTTTTCGTGGTCAGGCTGCGCTCGCTCATGTCCCAGGTCGCGAGTATTCC AGCCCCTACGATCGCCGCCGTGGAAGGTGGGTGAGGAGCCAGCCAGCGGG CCGAACATCGGTGATTCTGGTGTGTTTTTTTTTCGCAATTCTCTGGTAAG CTACAAGAGACCCGCCCGACATAGCGATCATAGATCCTGGCCCCAGCAAC CGTGCGCAGGCGAGGTATGTGCGAAGACCTCCTAGCTACAGCCTCGGTGT TTTTTTTGTTTTTTTCGTTTCTCCTTTCTCTCTGTCTCTCTGTCTCTCTC TCTCTCTCTCTCTGCCCTCCTCCTCTGCCACCTGCTGCGAATTTCCGACT CATGTGATTTGTCGTCGTGCTTCGCCCTTTTTGCCCTCGACATGTACGCG CAGGCGCGGCGTTCGGTGGGGGGCTTGAGCTGATGCTGGCGTGCGATCTT CGCGTCGTAGGGGCGGAGGCGGTGATGGGGCTGACGGAAACGAGCCTCGG GATCATCCCGGGGGCTGGAGGGACACAGCGTCTACCGCGGCTGATTGGTG TGTAACACAAGAGACAGGCTGGGAGCGGTTTAGTTCGGGAGCCCAGAGAG CAAGTGATGGCTCGTGCGTGGTGCAGCCAGCGCTGCCCCACCAGTGCAGG AAAATATGCAAGGAAAGACAAGGCGAATTAACCGCGGATAAATTACGTGC TCCCCCCCCCAAGGGTGTTCGTTAGGCTTTGCAGAGGGATAGACGTCCTC AAGGGTCTCACCGTTTTTATGAACAGCAGGGCCGTGGCTAAATGACCTTA CCCGCCTCGTCGCCCAAATGAAGTGTCGCCGTAGTCTGGGGCGGTGAAAG GGGGTTTAGTGTACCTACCACAGTCCTGCTGGACAGTTTTTCTTCCATTT GTTTTTAATGTTGGATATGGACCGCTGGCGTTAAAGTAGGCTTACTCTTG AGACTACCTCTCCCTCCTCGACTCAATTTACTGGAACTGGAAAACCGACC CGGATGACAACAGGTGCATCCAGAGCCAAGGAGCTCATCTTCACGGCTCG AAGGCTGGGCGCCACCGAGGCACACAAGCTCGGGATGGCGAACAAGCTGG TCGGCGCCGGGGGGGCCGAGAAGGAGGCGCTGTCGATAGCGGGGGAGATC GCTACGCGAGGCCCCCTGGCCGTGCGGGCGGCGAAGGCGGCGATCGACCA GGGTCTGGTGATGGTGAGAGCACGTTGCGGGTTGCGCGCTTTGCTGGGTT TGGCGGGGACTGGCTTTGTCTCGTTGGGAGAGCGTGCGTGTAGATGTATT TTGTTCCCTGTGGCTAACGTATTGGAGTTCTCAAGAAGCCGCGGCCGTTG GTGTTGAAGAGACGTCGCATCGTTTTTTGCCAGCGGGATGGGCGGCTTTC GGCCACCCCTCCTTCTAAGGATGCACCGCCATTTTGATGTGACTGCTGTT GTTTTCGCTCGAGGCTGTTTGTTTCCTGGAATTGAGACGAGTTTTGGGGG GCTTTTTGTTTTCGGGCGACAGCTAAAGCACAACCCGAAGGCGAGAGCAG AATTGGGTGGAGAAGGGGAGTTGGGATGCGATGTGATGTGATTGGGTGGG GGGGGCATCGCGATACGGTCATGCACACAGAGTAGCGGCGTAGCTGACGA CCGACCGTACAAGTTTGGATCTTTTGCCGCGGTGTAAACATTTGCACTAT GTACGAATCTGTTTCGTTCAGTGGTGGAACACTCTAAACGAACGGCGGGT TTTGCCACGTTCACACCCTCGAAACCGACCGTAAAAGTAGGTGTAATAGG TAACTCTGAAGAGATGACGTCTGTGCTCACCCCTCCATCCTACTCCTCGT CGGCTCTCCTCCCGCACCTTCCCCGCCCCGATGTTGTGGCACAACAAATG GTTGGTGTTTTGCGGGCCTTGCCTGACAGCGTTCGTGTCGTTTTTACCTC TTCCTATGTATGTAACTGCAATCGTTTTATTTTCTTTTTCGCCGGCGATC GAAGGCGGACGCGGAGCGAGGCATGTCGATCGAGCGAAAAATGTACGCGA AGGTGCTCGGGACGCAAGATAGAGACGAGGGGCTAGCGGCGTTCAAGGAG AGAAGGCCGCCAGAATTCACCGGCAACTAA
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Coding sequence (CDS) from alignment at S-firma_F_contig1073:22418..25397-

>mRNA_S-firma_F_contig1073.988.1 ID=mRNA_S-firma_F_contig1073.988.1|Name=mRNA_S-firma_F_contig1073.988.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1458bp|location=Sequence derived from alignment at S-firma_F_contig1073:22418..25397- (Sphaerotrichia firma ET2_F female)
ATGAACAACCCGAAGGCCAACGCGCTGGGCTTCAACCTCATCTCGGAGAT
GAACAACCCGAAGGCCAACGCGCTGGGCTTCAACCTCATCTCGGAGCTAG
AGGAAGCGGTCGGAGAAATCTCTCGGGACGAGTCCGTCCGAGCCGTGGTG
CTCAGCAGCGCCCTCCCCGGGGTGTTCTGCGCTGGCGCCGACCTGAAGGA
GCGGGCGGTCATGTCGAGGCAGGAGGCCGAGCTTTTCGTGGTCAGGCTGC
GCTCGCTCATGTCCCAGGTCGCGAGTATTCCAGCCCCTACGATCGCCGCC
GTGGAAGCTAGAGGAAGCGGTCGGAGAAATCTCTCGGGACGAGTCCGTCC
GAGCCGTGGTGCTCAGCAGCGCCCTCCCCGGGGTGTTCTGCGCTGGCGCC
GACCTGAAGGAGCGGGCGGTCATGTCGAGGCAGGAGGCCGAGCTTTTCGT
GGTCAGGCTGCGCTCGCTCATGTCCCAGGTCGCGAGTATTCCAGCCCCTA
CGATCGCCGCCGTGGAAGGCGCGGCGTTCGGTGGGGGGCTTGAGCTGATG
CTGGCGTGCGATCTTCGCGTCGTAGGGGCGGAGGCGGTGATGGGGCTGAC
GGAAACGAGCCTCGGGATCATCCCGGGGGCTGGAGGGACACAGCGTCTAC
CGCGGCTGATTGGCGCGGCGTTCGGTGGGGGGCTTGAGCTGATGCTGGCG
TGCGATCTTCGCGTCGTAGGGGCGGAGGCGGTGATGGGGCTGACGGAAAC
GAGCCTCGGGATCATCCCGGGGGCTGGAGGGACACAGCGTCTACCGCGGC
TGATTGGTGCATCCAGAGCCAAGGAGCTCATCTTCACGGCTCGAAGGCTG
GGCGCCACCGAGGCACACAAGCTCGGGATGGCGAACAAGCTGGTCGGCGC
CGGGGGGGCCGAGAAGGAGGCGCTGTCGATAGCGGGGGAGATCGCTACGC
GAGGCCCCCTGGCCGTGCGGGCGGCGAAGGCGGCGATCGACCAGGGTCTG
GTGATGGTGCATCCAGAGCCAAGGAGCTCATCTTCACGGCTCGAAGGCTG
GGCGCCACCGAGGCACACAAGCTCGGGATGGCGAACAAGCTGGTCGGCGC
CGGGGGGGCCGAGAAGGAGGCGCTGTCGATAGCGGGGGAGATCGCTACGC
GAGGCCCCCTGGCCGTGCGGGCGGCGAAGGCGGCGATCGACCAGGGTCTG
GTGATGGCGGACGCGGAGCGAGGCATGTCGATCGAGCGAAAAATGTACGC
GAAGGTGCTCGGGACGCAAGATAGAGACGAGGGGCTAGCGGCGTTCAAGG
AGAGAAGGCCGCCAGAATTCACCGGCAACTAAGCGGACGCGGAGCGAGGC
ATGTCGATCGAGCGAAAAATGTACGCGAAGGTGCTCGGGACGCAAGATAG
AGACGAGGGGCTAGCGGCGTTCAAGGAGAGAAGGCCGCCAGAATTCACCG
GCAACTAA
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