mRNA_S-firma_F_contig10722.980.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A7S0JUA2_CAFRO (ATP synthase subunit gamma n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JUA2_CAFRO) HSP 1 Score: 181 bits (458), Expect = 4.010e-53 Identity = 90/153 (58.82%), Postives = 116/153 (75.82%), Query Frame = 2
Query: 11 TAGAIDQCFDKDPIFPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
T A+D FDKDPIF A+AIAE V + +D L L +N+F N AK+++ P +AG VGV+P + +GY+VEPENNEE L+NL EYA G ++ +LESQA E+S R+ AMDNASTNAG+MVDRFTL YNR RQ+KITTELTEI++G+E+L
Sbjct: 174 TVLALDGIFDKDPIFETASAIAERAVSREFDTLTLAFNQFVNAAKFDSVRYHFPQIAGLPVGVMPARFEGYDVEPENNEEALVNLMEYAIGGSVFYALLESQACEISQRVTAMDNASTNAGDMVDRFTLIYNRARQAKITTELTEIISGAESL 326
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A812XUB7_9DINO (Atp5f1c protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XUB7_9DINO) HSP 1 Score: 152 bits (384), Expect = 9.750e-43 Identity = 81/161 (50.31%), Postives = 107/161 (66.46%), Query Frame = 2
Query: 2 PHMTAGAIDQCFDKDPIFPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNE--ETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEALVDD 478
P +T ++ FDK+PIFPLA AIAE I Q YD+L VYN F N A +NT P +A L GYE+ PE+ ET +NL E+A G ++ MLE+QA E++ R+ AMDNAS+NA +MVDRFT+ YNR RQ++ITTELTEI++G+E+L D
Sbjct: 108 PEITTMSVVDVFDKEPIFPLAGAIAERICNQDYDVLTFVYNRFINAASFNTEFRHFPNLASGSSDALA----GYEITPEDVSPAETQLNLSEFAIGGALFYQMLETQACEIAQRVTAMDNASSNAKDMVDRFTITYNRARQARITTELTEIISGAESLEAD 264
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A813BGQ3_9DINO (AtpG protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BGQ3_9DINO) HSP 1 Score: 139 bits (349), Expect = 2.570e-37 Identity = 78/162 (48.15%), Postives = 101/162 (62.35%), Query Frame = 2
Query: 2 PHMTAGAIDQCFDKDPIFPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYAT------AGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
P A DQC DK P F LAA I+E IV +P D + L YN++EN AK++T +P + G G P Y +E N+ TL N+ EY A +Y LE+QA E S R+ AMDNASTNA +M ++FTL YNRGRQ+KITTELTEI++G+E+L
Sbjct: 122 PEYFVKAFDQCVDKPPTFGLAARISETIVSEPSDYITLFYNKYENAAKFDTTFRHIPQLTGE--GEPPESFKQYAME--NSSATLQNMIEYGVVSATGMASALYYTFLEAQACETSQRVTAMDNASTNANDMAEKFTLLYNRGRQAKITTELTEIISGAESL 279
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A7S1UJC2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJC2_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.860e-29 Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 2
Query: 53 FPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
F AAA+++ + YD + LVYNEF + YNTR V M DV P+ YE EP+N E +++L EY +Y ++E SE SSR+ AM+NAS NAGE++D+ TLQYNR RQ++ITTEL EI++G+ AL
Sbjct: 162 FATAAALSQVASKDSYDAVHLVYNEFVSAIAYNTRLATVAPMLKEDVAEPMPE---YEFEPDNKNEVMVDLFEYMLTTKIYYGLMEGATSEQSSRMNAMENASKNAGELIDKLTLQYNRARQARITTELIEIISGASAL 297
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A7R9UBL1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBL1_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.160e-27 Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 2
Query: 2 PHMTAGAIDQCFDKDPIFPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTR-CMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
P AGAI + F AAA+A+ ++ D +VYNEF + Y TR P + + +P YE EP+N E +++L EY +Y ++ES SE SSR+ AM+NAS NAGE++D+ TLQYNR RQ++ITTEL EI++G+ AL
Sbjct: 127 PESMAGAITDA-EAPHNFSTAAAVAKLAAKEGVDATHIVYNEFVSAISYTTRLATLAPLLKEGEAEPMPE----YEFEPDNKNEIMVDLYEYLLTSKIYYGLMESATSEQSSRMNAMENASKNAGELIDKLTLQYNRARQARITTELIEIISGASAL 278
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A7S3HEJ8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEJ8_9STRA) HSP 1 Score: 113 bits (282), Expect = 3.170e-27 Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 2
Query: 53 FPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
F LA A+A++++ YD + +YN+F++ Y V + + P L YEVEP+N+ ETL N EY A MY ++++ SE SSR+ AM+NAS NAGEM+++ LQYNR RQ++ITTEL EI++G+ AL
Sbjct: 161 FELATALAQDVIGGDYDAVHFMYNKFKSAIAYIPSVKTVAPL----LDPAHPFLFNYEVEPDNDPETLQNFYEYTVASKMYHALMDNATSEQSSRMSAMENASKNAGEMLNKLNLQYNRARQARITTELIEIISGASAL 295
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A6T5UXC2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis cordata TaxID=118079 RepID=A0A6T5UXC2_9EUKA) HSP 1 Score: 106 bits (264), Expect = 6.230e-26 Identity = 60/141 (42.55%), Postives = 89/141 (63.12%), Query Frame = 2
Query: 53 FPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLP--PKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
F LA A+ + ++ YD + L+YN+F++ Y +P++ + P P L + VEP+N+ ETL N EY A +Y +L++ SE SSR+ AM+NAS NAGEM+ + LQYNR RQ++ITTEL EI++G+ AL
Sbjct: 25 FELATALTQEVLNGEYDAVHLLYNKFKSAIVY------IPSVKSVTPLLDPASPFLFNFAVEPDNDPETLQNFYEYTLATKVYHSLLDNATSEQSSRMSAMENASKNAGEMLGKLNLQYNRARQARITTELIEIISGASAL 159
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A5D6YEN2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEN2_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.410e-25 Identity = 60/154 (38.96%), Postives = 96/154 (62.34%), Query Frame = 2
Query: 17 GAIDQCFDKDPIFPLAAAIAENIV---RQPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEAL 469
G + + F P F +A+AIAE IV + + + +VYN+F++ Y +P++ V L GYE+EP+N EE L +L+E+ A ++ ++E+ SE SSR+ AM+NA+TNA +++ TL YN+ RQS+ITTEL EI++G+ +L
Sbjct: 152 GNVAETFATPPNFAVASAIAEGIVAGAKSENEKVHVVYNKFQSAIAY------LPSIRSLSVSPAAEALAGYELEPDNREEVLADLKEFEIASAVFQGLIENSTSEESSRMAAMENATTNAQDLISSLTLVYNKARQSRITTELIEIISGASSL 299
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A6U5JBX2_9STRA (ATP synthase subunit gamma n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JBX2_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.560e-25 Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 2
Query: 59 LAAAIAENIVRQPYDLLALVYNEFENTAKYNTRCMFV-PTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEALVD 475
L+A I + + YD + ++YN F N A Y + + P ++ D L YE EP+ E L NL+EY Y +++ ASE SSR+ AM+NAS NAGEM+D+ TLQYNR RQ++ITTEL EI++G+ AL D
Sbjct: 126 LSAEILDVAKEKDYDGIVIIYNSFVNAAVYKQKYRIITPFISEGDA----ESLVEYEFEPDVKAEVLENLKEYLFTSQFYECFMDAAASEQSSRMTAMENASRNAGEMIDKLTLQYNRARQTRITTELIEIISGASALED 261
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Match: A0A6T7FHU0_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7FHU0_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.700e-25 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 2
Query: 53 FPLAAAIAENIVR---QPYDLLALVYNEFENTAKYNTRCMFVPTMAGYDVGVLPPKLDGYEVEPENNEETLINLEEYATAGLMYSIMLESQASEVSSRIIAMDNASTNAGEMVDRFTLQYNRGRQSKITTELTEIVAGSEALVD 475
F LAAA++ ++ Q YD + LVYN F N A Y + + G G P + YE EP+ E + ++ EY ++ ++ ASE S+R+ AM+NAS NAGEM+D+ TL+YNR RQS+ITTEL EI++G+ AL D
Sbjct: 191 FSLAAALSAELIAAGAQDYDAVVLVYNSFVNKATYQQKYKIIKPFTGE--GEDEPMM-AYEFEPDTKGEVMADMYEYLLTSQIFHSFMDGAASEQSARMTAMENASKNAGEMIDKLTLKYNRARQSRITTELIEIISGASALED 331 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10722.980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10722.980.1 >prot_S-firma_F_contig10722.980.1 ID=prot_S-firma_F_contig10722.980.1|Name=mRNA_S-firma_F_contig10722.980.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=162bp MTAGAIDQCFDKDPIFPLAAAIAENIVRQPYDLLALVYNEFENTAKYNTRback to top mRNA from alignment at S-firma_F_contig10722:4313..4964- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10722.980.1 ID=mRNA_S-firma_F_contig10722.980.1|Name=mRNA_S-firma_F_contig10722.980.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=652bp|location=Sequence derived from alignment at S-firma_F_contig10722:4313..4964- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10722:4313..4964- >mRNA_S-firma_F_contig10722.980.1 ID=mRNA_S-firma_F_contig10722.980.1|Name=mRNA_S-firma_F_contig10722.980.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=972bp|location=Sequence derived from alignment at S-firma_F_contig10722:4313..4964- (Sphaerotrichia firma ET2_F female)back to top |