mRNA_S-firma_F_contig1072.975.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S2XXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY2_9STRA) HSP 1 Score: 252 bits (643), Expect = 3.190e-78 Identity = 130/225 (57.78%), Postives = 157/225 (69.78%), Query Frame = 1
Query: 1 MASCYGSISAPLGGSAQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLES 675
MASCYG IS GG+ +SYLPI++ L +G VE+D F+ESEH G + +N +IEEGL+WPFEE M M+ FR+YFLSHAAFVVR +EE V+ G FYIKPNFPGRCSH+CNGGFIT P RR G+A+LMGH FLR AKDLGYKASYFNLVF +N AS++LW+ LGF +A VPKA RLKGI+G DA+QF+YDLE+
Sbjct: 49 MASCYGDIS---GGNVTNISYLPIKSCLKNGLEVELDFFQESEHEVGLQAMNQIIEEGLAWPFEEKMTMEGFRSYFLSHAAFVVR--------------------------KAEEPSEVL--GMFYIKPNFPGRCSHICNGGFITLPEYRRLGIAKLMGHNFLRMAKDLGYKASYFNLVFVTNTASIKLWKKLGFRCIARVPKAARLKGIDGCTDALQFYYDLEN 242
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A6H5J9S4_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S4_9PHAE) HSP 1 Score: 235 bits (599), Expect = 1.760e-71 Identity = 119/150 (79.33%), Postives = 127/150 (84.67%), Query Frame = 1
Query: 274 ATEAPPAGAPTGGATVTAATNSEEDER---VVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESLRGEDLPEDLRGS 714
A EA G+ G + A E+DER V VWG FYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGY+ASYFNLVFRSNEASLRLWRGLGFTELAVVPKA RLKGI+GLVDA QFHYDL++LR EDLP+DLR S
Sbjct: 140 AAEAATIGSDETGKAGSTAVGEEDDERDAGVKVWGTFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLVDASQFHYDLDNLRQEDLPQDLRES 289
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A0L0FJK2_9EUKA (N-acetyltransferase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJK2_9EUKA) HSP 1 Score: 213 bits (543), Expect = 7.660e-64 Identity = 117/216 (54.17%), Postives = 140/216 (64.81%), Query Frame = 1
Query: 46 AQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETM-GMDAFRAYFLSHAAFVVRV-------TPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDL 669
A+ L YLP+R TL DGT VE+D FRE E+ G L+N +I EG SWPF +DAFR YFLSHAAFVVRV T T +T A T TV + + + G FY+KPNFP RCS +CNGGFIT+P RRRGVA+LMG + R AKDLGY+ FNLVF SNEASLRLW GLGFT LA +P+ LKGI+G DA Q++ +L
Sbjct: 17 AELLPYLPLRQTLKDGTAVELDFFREDEYEQGFTLMNQIIVEGQSWPFMHAYDSVDAFRCYFLSHAAFVVRVCDVPEKFTKATDSTIVENASTGTDLGTV-------DLRKDAILGCFYVKPNFPDRCSGICNGGFITNPMARRRGVAKLMGKLYCRLAKDLGYRGCLFNLVFASNEASLRLWDGLGFTRLACLPQCAELKGIDGFTDAYQYYRNL 225
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S4SMR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SMR7_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.070e-60 Identity = 110/216 (50.93%), Postives = 141/216 (65.28%), Query Frame = 1
Query: 64 LPIRTTLPDGTPVEIDVFR--ESEHAAGHRLLNGVIEEGLSWPFEETMGMD-AFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESLRGEDLPED 702
LPIR TL DGT VE+ F + G +L+N VIEEG +WPFE T + ++R+Y+LSHAAFVVR A+E + +PT G V G FY+KPNFPGRCSHVCNGGFITDP+ R GV RLMG +FL A+DL YK++YFNLVF+SN S++LW LGFT +A +P A RL+G++GL DA +++DL +L E P D
Sbjct: 73 LPIRATLNDGTKVEVAPFDFDAGDVEIGMQLMNDVIEEGRAWPFEPTFPTEESYRSYYLSHAAFVVRCVVDNDASELDKSSSPTHGE---------------VMGTFYVKPNFPGRCSHVCNGGFITDPKFRGSGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIQLWESLGFTRVATIPNAARLEGVDGLDDAYGYYFDLTTLPEEFDPVD 273
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A1Z5JQ04_FISSO (N-acetyltransferase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ04_FISSO) HSP 1 Score: 201 bits (512), Expect = 1.320e-59 Identity = 108/207 (52.17%), Postives = 130/207 (62.80%), Query Frame = 1
Query: 61 YLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFE-ETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
++P TTL D TPV++ F ESE AG L+N VI+EG SWPFE E ++A+R YFLSHAAFVVR E V G FYIKPNFPGRCSH+CNGGFIT P RRRGVA LMG FL+ A LGYK++YFNLVF+SNEAS+ LW LGF +AV+ +A RLKG++ L A + YDLE +
Sbjct: 22 WIPFDTTLRDETPVQVGPFEESEWNAGMTLMNHVIQEGRSWPFESEFETLEAYRGYFLSHAAFVVRCL-----------------------------ETKEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVAHLMGKVFLKAAHQLGYKSAYFNLVFQSNEASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDLEKM 199
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: D7FSN4_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN4_ECTSI) HSP 1 Score: 195 bits (495), Expect = 3.680e-56 Identity = 92/103 (89.32%), Postives = 98/103 (95.15%), Query Frame = 1
Query: 334 NSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLV 642
++E D + VWGAFYIKPNFPGRCSHVCNGGFITDPRRR+RGVARLMGHAFLRFAKDLGY+ASYFNLVFRSNEASLRLWRGLGFTELAVVPKA RLKGI+GLV
Sbjct: 164 DNERDAGMKVWGAFYIKPNFPGRCSHVCNGGFITDPRRRQRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLV 266
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S0EEN8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEN8_9CRYP) HSP 1 Score: 193 bits (491), Expect = 7.740e-56 Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 1
Query: 55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDL 669
L LP+RT L G VE+D+ RE E RLLN +IEEG +WPF++ MD FR YFLSH AFVVR AG +NS + G FYIKPN+PGRCSHVCNGGFIT R++GV RLMG +L+ A+ LGY+ SYFNLVF SNE S+RLW GLGF ++ + K +LKGIEGLVDA + YDL
Sbjct: 16 LKKLPLRTELKSGRQVEVDLVREVEWEECMRLLNEIIEEGRAWPFDKAYAKMDDFRGYFLSHTAFVVRAIN---------AGLD---------SNSRFSHPGDIMGIFYIKPNYPGRCSHVCNGGFITKKDFRKQGVGRLMGACYLQLARALGYEMSYFNLVFASNEESIRLWDGLGFERVSHLRKCAKLKGIEGLVDAYGYCYDL 203
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: L1JY99_GUITC (N-acetyltransferase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY99_GUITC) HSP 1 Score: 192 bits (488), Expect = 2.370e-55 Identity = 103/209 (49.28%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
L LP+ L G VE+D+ RE E RLLN +IE+G +WPF++T M+ F+ YFLSH AFVVR T + G ++ D V G FYIKPN+PGRCSHVCNGGFIT R +GV +LMG +L+FA+ LGY+ SYFNLVF SNE S+RLW GLGF ++++ K +LKGIEGLVDA + YDL ++
Sbjct: 19 LKMLPLSAELKSGRQVEVDLVREEEWEECMRLLNAIIEQGRAWPFDKTYTRMEDFQGYFLSHTAFVVRST--------------SAGLDANKKFSNPGD----VMGIFYIKPNYPGRCSHVCNGGFITKEEFRMQGVGKLMGACYLKFARALGYEMSYFNLVFASNEESIRLWDGLGFQRVSLLKKCAKLKGIEGLVDAYGYCYDLATV 209
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: B8BXU1_THAPS (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU1_THAPS) HSP 1 Score: 188 bits (478), Expect = 3.520e-54 Identity = 114/248 (45.97%), Postives = 147/248 (59.27%), Query Frame = 1
Query: 1 MASCYGSISAPLGGSAQGLSYL-PIRTTLPDGTPVEIDVFR-------ESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGI-EGLVD-AIQFHYDLESLRGEDLPEDLRG 711
M + YG + +A L++L P ++TL DG VE+D FR E E AG L+N +I EG SWPFEE ++ + YFLSH AFVVR G + +S + E + G FYIKPNFPGRCSH+CNGGFI PR R GV RLMG+ FLR ++DLGYK+SYFNLVF+SN S+ LW LGF +A + KA RL+G+ EG++D A + YDLE +LP+D G
Sbjct: 1 MTTAYGGTPSDGKHNAHLLTHLIPYQSTLSDGRRVEVDFFRHSSTEIEEDEWFAGLALMNLIIREGRSWPFEEEFSSVEQYSGYFLSHTAFVVRAL--------------NNGMDASKRNSSSKGE---ILGCFYIKPNFPGRCSHICNGGFIVAPRFRGLGVGRLMGNVFLRASRDLGYKSSYFNLVFKSNPGSIHLWESLGFQRVATLEKAARLEGMNEGVLDTAYGYRYDLE-----ELPDDYLG 226
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S1G8C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8C6_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.750e-54 Identity = 104/208 (50.00%), Postives = 128/208 (61.54%), Query Frame = 1
Query: 55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
L+YLP+ T G VE+D R+ E A LLN VIEEG ++PF M + F+AYFLS+ AFVVR+ EA PA + N V G FY+KPNFPGR SH+ NGGF+ PR RR+GVA LMG +L A+DLGY+AS FNLVF SN S+RLW LGFT VP+AG LKG+ G VDA Q+ YDL ++
Sbjct: 14 LAYLPLAATTRAGVAVEVDYARDDELEACRALLNAVIEEGQTYPFRNQMSPETFKAYFLSNDAFVVRLRRGADGAEAAPA--------IDGLDNG-------VLGCFYVKPNFPGRASHISNGGFLVAPRARRQGVASLMGRCYLAMARDLGYRASMFNLVFVSNAPSIRLWENLGFTRTGTVPRAGDLKGL-GYVDAAQYWYDLTTV 205 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1072.975.1 >prot_S-firma_F_contig1072.975.1 ID=prot_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=240bp MASCYGSISAPLGGSAQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLback to top mRNA from alignment at S-firma_F_contig1072:16710..19462- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1072.975.1 ID=mRNA_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2753bp|location=Sequence derived from alignment at S-firma_F_contig1072:16710..19462- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1072:16710..19462- >mRNA_S-firma_F_contig1072.975.1 ID=mRNA_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1440bp|location=Sequence derived from alignment at S-firma_F_contig1072:16710..19462- (Sphaerotrichia firma ET2_F female)back to top |