mRNA_S-firma_F_contig1072.975.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1072.975.1
Unique NamemRNA_S-firma_F_contig1072.975.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S2XXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY2_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.190e-78
Identity = 130/225 (57.78%), Postives = 157/225 (69.78%), Query Frame = 1
Query:    1 MASCYGSISAPLGGSAQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLES 675
            MASCYG IS   GG+   +SYLPI++ L +G  VE+D F+ESEH  G + +N +IEEGL+WPFEE M M+ FR+YFLSHAAFVVR                           +EE   V+  G FYIKPNFPGRCSH+CNGGFIT P  RR G+A+LMGH FLR AKDLGYKASYFNLVF +N AS++LW+ LGF  +A VPKA RLKGI+G  DA+QF+YDLE+
Sbjct:   49 MASCYGDIS---GGNVTNISYLPIKSCLKNGLEVELDFFQESEHEVGLQAMNQIIEEGLAWPFEEKMTMEGFRSYFLSHAAFVVR--------------------------KAEEPSEVL--GMFYIKPNFPGRCSHICNGGFITLPEYRRLGIAKLMGHNFLRMAKDLGYKASYFNLVFVTNTASIKLWKKLGFRCIARVPKAARLKGIDGCTDALQFYYDLEN 242          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A6H5J9S4_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S4_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 1.760e-71
Identity = 119/150 (79.33%), Postives = 127/150 (84.67%), Query Frame = 1
Query:  274 ATEAPPAGAPTGGATVTAATNSEEDER---VVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESLRGEDLPEDLRGS 714
            A EA   G+   G   + A   E+DER   V VWG FYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGY+ASYFNLVFRSNEASLRLWRGLGFTELAVVPKA RLKGI+GLVDA QFHYDL++LR EDLP+DLR S
Sbjct:  140 AAEAATIGSDETGKAGSTAVGEEDDERDAGVKVWGTFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLVDASQFHYDLDNLRQEDLPQDLRES 289          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A0L0FJK2_9EUKA (N-acetyltransferase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJK2_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 7.660e-64
Identity = 117/216 (54.17%), Postives = 140/216 (64.81%), Query Frame = 1
Query:   46 AQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETM-GMDAFRAYFLSHAAFVVRV-------TPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDL 669
            A+ L YLP+R TL DGT VE+D FRE E+  G  L+N +I EG SWPF      +DAFR YFLSHAAFVVRV       T  T +T    A   T   TV       +  +  + G FY+KPNFP RCS +CNGGFIT+P  RRRGVA+LMG  + R AKDLGY+   FNLVF SNEASLRLW GLGFT LA +P+   LKGI+G  DA Q++ +L
Sbjct:   17 AELLPYLPLRQTLKDGTAVELDFFREDEYEQGFTLMNQIIVEGQSWPFMHAYDSVDAFRCYFLSHAAFVVRVCDVPEKFTKATDSTIVENASTGTDLGTV-------DLRKDAILGCFYVKPNFPDRCSGICNGGFITNPMARRRGVAKLMGKLYCRLAKDLGYRGCLFNLVFASNEASLRLWDGLGFTRLACLPQCAELKGIDGFTDAYQYYRNL 225          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S4SMR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SMR7_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.070e-60
Identity = 110/216 (50.93%), Postives = 141/216 (65.28%), Query Frame = 1
Query:   64 LPIRTTLPDGTPVEIDVFR--ESEHAAGHRLLNGVIEEGLSWPFEETMGMD-AFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESLRGEDLPED 702
            LPIR TL DGT VE+  F     +   G +L+N VIEEG +WPFE T   + ++R+Y+LSHAAFVVR      A+E   + +PT G                V G FY+KPNFPGRCSHVCNGGFITDP+ R  GV RLMG +FL  A+DL YK++YFNLVF+SN  S++LW  LGFT +A +P A RL+G++GL DA  +++DL +L  E  P D
Sbjct:   73 LPIRATLNDGTKVEVAPFDFDAGDVEIGMQLMNDVIEEGRAWPFEPTFPTEESYRSYYLSHAAFVVRCVVDNDASELDKSSSPTHGE---------------VMGTFYVKPNFPGRCSHVCNGGFITDPKFRGSGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIQLWESLGFTRVATIPNAARLEGVDGLDDAYGYYFDLTTLPEEFDPVD 273          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A1Z5JQ04_FISSO (N-acetyltransferase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ04_FISSO)

HSP 1 Score: 201 bits (512), Expect = 1.320e-59
Identity = 108/207 (52.17%), Postives = 130/207 (62.80%), Query Frame = 1
Query:   61 YLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFE-ETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
            ++P  TTL D TPV++  F ESE  AG  L+N VI+EG SWPFE E   ++A+R YFLSHAAFVVR                               E   V G FYIKPNFPGRCSH+CNGGFIT P  RRRGVA LMG  FL+ A  LGYK++YFNLVF+SNEAS+ LW  LGF  +AV+ +A RLKG++ L  A  + YDLE +
Sbjct:   22 WIPFDTTLRDETPVQVGPFEESEWNAGMTLMNHVIQEGRSWPFESEFETLEAYRGYFLSHAAFVVRCL-----------------------------ETKEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVAHLMGKVFLKAAHQLGYKSAYFNLVFQSNEASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDLEKM 199          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: D7FSN4_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN4_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 3.680e-56
Identity = 92/103 (89.32%), Postives = 98/103 (95.15%), Query Frame = 1
Query:  334 NSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLV 642
            ++E D  + VWGAFYIKPNFPGRCSHVCNGGFITDPRRR+RGVARLMGHAFLRFAKDLGY+ASYFNLVFRSNEASLRLWRGLGFTELAVVPKA RLKGI+GLV
Sbjct:  164 DNERDAGMKVWGAFYIKPNFPGRCSHVCNGGFITDPRRRQRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLV 266          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S0EEN8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEN8_9CRYP)

HSP 1 Score: 193 bits (491), Expect = 7.740e-56
Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 1
Query:   55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDL 669
            L  LP+RT L  G  VE+D+ RE E     RLLN +IEEG +WPF++    MD FR YFLSH AFVVR            AG           +NS       + G FYIKPN+PGRCSHVCNGGFIT    R++GV RLMG  +L+ A+ LGY+ SYFNLVF SNE S+RLW GLGF  ++ + K  +LKGIEGLVDA  + YDL
Sbjct:   16 LKKLPLRTELKSGRQVEVDLVREVEWEECMRLLNEIIEEGRAWPFDKAYAKMDDFRGYFLSHTAFVVRAIN---------AGLD---------SNSRFSHPGDIMGIFYIKPNYPGRCSHVCNGGFITKKDFRKQGVGRLMGACYLQLARALGYEMSYFNLVFASNEESIRLWDGLGFERVSHLRKCAKLKGIEGLVDAYGYCYDL 203          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: L1JY99_GUITC (N-acetyltransferase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY99_GUITC)

HSP 1 Score: 192 bits (488), Expect = 2.370e-55
Identity = 103/209 (49.28%), Postives = 132/209 (63.16%), Query Frame = 1
Query:   55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
            L  LP+   L  G  VE+D+ RE E     RLLN +IE+G +WPF++T   M+ F+ YFLSH AFVVR T              + G       ++  D    V G FYIKPN+PGRCSHVCNGGFIT    R +GV +LMG  +L+FA+ LGY+ SYFNLVF SNE S+RLW GLGF  ++++ K  +LKGIEGLVDA  + YDL ++
Sbjct:   19 LKMLPLSAELKSGRQVEVDLVREEEWEECMRLLNAIIEQGRAWPFDKTYTRMEDFQGYFLSHTAFVVRST--------------SAGLDANKKFSNPGD----VMGIFYIKPNYPGRCSHVCNGGFITKEEFRMQGVGKLMGACYLKFARALGYEMSYFNLVFASNEESIRLWDGLGFQRVSLLKKCAKLKGIEGLVDAYGYCYDLATV 209          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: B8BXU1_THAPS (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU1_THAPS)

HSP 1 Score: 188 bits (478), Expect = 3.520e-54
Identity = 114/248 (45.97%), Postives = 147/248 (59.27%), Query Frame = 1
Query:    1 MASCYGSISAPLGGSAQGLSYL-PIRTTLPDGTPVEIDVFR-------ESEHAAGHRLLNGVIEEGLSWPFEETMG-MDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGI-EGLVD-AIQFHYDLESLRGEDLPEDLRG 711
            M + YG   +    +A  L++L P ++TL DG  VE+D FR       E E  AG  L+N +I EG SWPFEE    ++ +  YFLSH AFVVR                  G   +   +S + E   + G FYIKPNFPGRCSH+CNGGFI  PR R  GV RLMG+ FLR ++DLGYK+SYFNLVF+SN  S+ LW  LGF  +A + KA RL+G+ EG++D A  + YDLE     +LP+D  G
Sbjct:    1 MTTAYGGTPSDGKHNAHLLTHLIPYQSTLSDGRRVEVDFFRHSSTEIEEDEWFAGLALMNLIIREGRSWPFEEEFSSVEQYSGYFLSHTAFVVRAL--------------NNGMDASKRNSSSKGE---ILGCFYIKPNFPGRCSHICNGGFIVAPRFRGLGVGRLMGNVFLRASRDLGYKSSYFNLVFKSNPGSIHLWESLGFQRVATLEKAARLEGMNEGVLDTAYGYRYDLE-----ELPDDYLG 226          
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Match: A0A7S1G8C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8C6_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.750e-54
Identity = 104/208 (50.00%), Postives = 128/208 (61.54%), Query Frame = 1
Query:   55 LSYLPIRTTLPDGTPVEIDVFRESEHAAGHRLLNGVIEEGLSWPFEETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGAPTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAVVPKAGRLKGIEGLVDAIQFHYDLESL 678
            L+YLP+  T   G  VE+D  R+ E  A   LLN VIEEG ++PF   M  + F+AYFLS+ AFVVR+       EA PA        +    N        V G FY+KPNFPGR SH+ NGGF+  PR RR+GVA LMG  +L  A+DLGY+AS FNLVF SN  S+RLW  LGFT    VP+AG LKG+ G VDA Q+ YDL ++
Sbjct:   14 LAYLPLAATTRAGVAVEVDYARDDELEACRALLNAVIEEGQTYPFRNQMSPETFKAYFLSNDAFVVRLRRGADGAEAAPA--------IDGLDNG-------VLGCFYVKPNFPGRASHISNGGFLVAPRARRQGVASLMGRCYLAMARDLGYRASMFNLVFVSNAPSIRLWENLGFTRTGTVPRAGDLKGL-GYVDAAQYWYDLTTV 205          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1072.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XXY2_9STRA3.190e-7857.78Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5J9S4_9PHAE1.760e-7179.33N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0L0FJK2_9EUKA7.660e-6454.17N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S4SMR7_9STRA3.070e-6050.93Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JQ04_FISSO1.320e-5952.17N-acetyltransferase domain-containing protein n=2 ... [more]
D7FSN4_ECTSI3.680e-5689.32N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S0EEN8_9CRYP7.740e-5651.94Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1JY99_GUITC2.370e-5549.28N-acetyltransferase domain-containing protein n=1 ... [more]
B8BXU1_THAPS3.520e-5445.97N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S1G8C6_9STRA3.750e-5450.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1072contigS-firma_F_contig1072:16710..19462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog72019.SARC_10871T0
Preferred nameSPT10
PFAMsAcetyltransf_1,zf-H2C2
Max annot lvl33154|Opisthokonta
GOsGO:0000122,GO:0000183,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006520,GO:0006525,GO:0006526,GO:0006560,GO:0006562,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010484,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016053,GO:0016054,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032931,GO:0033554,GO:0034212,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043543,GO:0043565,GO:0043966,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046941,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097043,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1902679,GO:1903506,GO:1903507,GO:1990841,GO:2000112,GO:2000113,GO:2001141
Evalue6.46e-67
EggNOG OGsCOG0454@1|root,2QRFX@2759|Eukaryota,38ESU@33154|Opisthokonta
DescriptionN-acetyltransferase activity
COG categoryK
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-07_002520.1
Exons5
Model size1214
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1072.975.1prot_S-firma_F_contig1072.975.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1072 17204..19462 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.9895818-UTR-S-firma_F_contig1072:16709..172031622815612.9895818-UTR-S-firma_F_contig1072:16709..17203Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1072 16710..17203 -
1696949454.0434005-UTR-S-firma_F_contig1072:16709..172031696949454.0434005-UTR-S-firma_F_contig1072:16709..17203Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1072 16710..17203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815613.0060732-CDS-S-firma_F_contig1072:17203..172841622815613.0060732-CDS-S-firma_F_contig1072:17203..17284Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 17204..17284 -
1696949454.0550177-CDS-S-firma_F_contig1072:17203..172841696949454.0550177-CDS-S-firma_F_contig1072:17203..17284Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 17204..17284 -
1622815613.0171976-CDS-S-firma_F_contig1072:17693..177981622815613.0171976-CDS-S-firma_F_contig1072:17693..17798Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 17694..17798 -
1696949454.0647752-CDS-S-firma_F_contig1072:17693..177981696949454.0647752-CDS-S-firma_F_contig1072:17693..17798Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 17694..17798 -
1622815613.0301325-CDS-S-firma_F_contig1072:18041..184041622815613.0301325-CDS-S-firma_F_contig1072:18041..18404Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 18042..18404 -
1696949454.074609-CDS-S-firma_F_contig1072:18041..184041696949454.074609-CDS-S-firma_F_contig1072:18041..18404Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 18042..18404 -
1622815613.043328-CDS-S-firma_F_contig1072:18844..188901622815613.043328-CDS-S-firma_F_contig1072:18844..18890Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 18845..18890 -
1696949454.0862432-CDS-S-firma_F_contig1072:18844..188901696949454.0862432-CDS-S-firma_F_contig1072:18844..18890Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 18845..18890 -
1622815613.0594094-CDS-S-firma_F_contig1072:19337..194621622815613.0594094-CDS-S-firma_F_contig1072:19337..19462Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 19338..19462 -
1696949454.1022801-CDS-S-firma_F_contig1072:19337..194621696949454.1022801-CDS-S-firma_F_contig1072:19337..19462Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1072 19338..19462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1072.975.1

>prot_S-firma_F_contig1072.975.1 ID=prot_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=240bp
MASCYGSISAPLGGSAQGLSYLPIRTTLPDGTPVEIDVFRESEHAAGHRL
LNGVIEEGLSWPFEETMGMDAFRAYFLSHAAFVVRVTPPTPATEAPPAGA
PTGGATVTAATNSEEDERVVVWGAFYIKPNFPGRCSHVCNGGFITDPRRR
RRGVARLMGHAFLRFAKDLGYKASYFNLVFRSNEASLRLWRGLGFTELAV
VPKAGRLKGIEGLVDAIQFHYDLESLRGEDLPEDLRGST*
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mRNA from alignment at S-firma_F_contig1072:16710..19462-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1072.975.1 ID=mRNA_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2753bp|location=Sequence derived from alignment at S-firma_F_contig1072:16710..19462- (Sphaerotrichia firma ET2_F female)
ATGGCTTCTTGCTACGGGAGCATATCCGCGCCGTTGGGTGGATCAGCGCA AGGCCTTTCGTACCTCCCGATCAGGACCACACTTCCTGACGGCACTCCGG TCGAAATTGATGTTTTCAGAGAAAGGTACGATGGTGTTCCTCGAAGGAAT CTGTACAATTGCCTGGACGGCGGTACTGCTTGGTAGGCGGTCTAGCCCTG TCCTGCTCAACCGCAGAGACAGCATAATAGTGTCAGCGGGCTCTGTTTGT TTTTGTACGTCGAGTCTGCCGAAAAAACGCGGCACACACCGACAAAATCT CAAAATCTTGCACGAATGGATTTGTCCGCAGCGTCACCGGCGTCATTGTT CTTAGAGAAAAGACTGGAACAAATTCTACAACAGGTTCTGTGCCGTTGGT GGTACTTCCTGTAGTTGCCTTCCCTTCGCACACTTTTCACTGCATCCTAA AGAAGCGTGACGTAGTTCCCCGTTCCCCAACGTCTCCTCTCTCTCTCTCT CTCTCCCTCTCGATGTCTCTCGATGTCTCTCTCGCCACGACAACGATCCT TCCCGGACACTTTTTTGGTCAGCGAGCATGCAGCAGGACATCGACTTCTG AATGGCGTTATCGAAGAGGTGGGCGCACAAATAGCTATACCAAAGGGGCC TTAGTCTGGGGCGTGCGCGTGACAGGTAGCTGTTGCTCCGTACTTGAACA CGGTTCTTATCGCACGGTCATACTGCGGCGTAGAGCAGTAGTTTAAAAAC AAAATATCGGACAAGGTTGTCAACGAAACCTGTGAACATTCAGCATCTGC CAACGGGGACATCGCACGGCCCGCAGACTGGCTGGCAGCCGGAAGAACCG GTCCCTTTTTCCCGCTTGACCCACCTCCATTAAGCAGACCGGACTGGCCC CCGTTTGCTCTGTCTGCCTCTCTGTCTGCCTCTCTGTCTCTCTCTGTCTC TCTCTCTCCACCACCCCCGCACCCGTGCCGATTGTCCTACGGCCACAACA TGTATCAAAATCTGATATCTGACCTCTTCGTCATCACCATCACCGTCTCC ACCGTCAGGGTCTCTCATGGCCCTTTGAGGAAACTATGGGCATGGATGCC TTCCGGGCCTACTTCCTCTCCCACGCGGCTTTCGTTGTGCGCGTCACCCC CCCCACTCCCGCCACAGAAGCTCCCCCCGCAGGAGCACCGACCGGCGGCG CGACGGTCACGGCCGCGACGAACAGCGAGGAGGACGAGCGCGTAGTGGTG TGGGGCGCGTTCTACATCAAGCCCAACTTTCCGGGCAGGTGCTCGCACGT GTGCAACGGAGGGTTCATCACGGACCCCCGCAGGAGGAGGAGGGGCGTGG CAAGGCTGATGGGCCACGCGTTCCTGCGGTTCGCGAAGGACCTGGGCTAC AAGGCGAGCTACTTCAACTTGGTGAGAGCGCCTTTCGGCAAGCGGTCGTT TGTGCTTGTAGACCGCAGACCGCACGGGTTTGGCGCTGTGGGTCCAGTTC GTACGTTAGGCCCCCCAGCGTCGAGCACACGCAGCATCGGCGGCTGCTGG GGCGAAACGCCTGGTCTGCCTCGCGGTCAGACGGCATTCCCGTTGGCAAT TCAGGCTTTTGGCCGAATGGAGCCCCTTTCCTGCCCCTCTCTGTTATGGT GCACCATGCCGCAGGTGTTCCGTAGTAATGAGGCATCTCTTCGACTCTGG CGTGGCCTGGGTTTCACAGAGCTGGCGGTGGTTCCCAAAGCGGGCCGCCT GAAGGGGATCGAAGGGCTGGTGAGTGAACGGCCGGACGTGTTGAAAACGG GTGCCTTGTTCGTCTAGAGCAGGAGTAGGAAATGGATACATCAGCGATGG GTGGCGTGTGTCCTTTCGACCGCTTCCAACCGTACCCGGGGTGGGCGTGC CCGCTGTTTTTCGGTGTTTGGATGTGGCATTGGCGGACTGCTGAGGTAAT TTTCTCGATGACAAACGAGTGCATGACTCCGTTTGATCGTTTCGAACGGA ACAGGGTAGACTCGCTGAGCTGGAAATTTAGGCGAGTACACTCGCCTTCG CTGGTCTTTCGGTCTTTAACTCCGAAGCGTGGTGGAGTTTCGGGGTTACA GGTCGTGTATTTTTCTTGCAACCATTGTCGACGTGCTATTGAATGCCAAC TTTGCTCCACCCTCTCGTTGTTTGATAGGTGGATGCCATTCAGTTCCACT ACGACTTGGAGTCTCTCCGCGGAGAAGACCTCCCGGAGGACCTACGGGGA TCTACGTAATGATTTGTTTCAGATTCGCCGCTCTTTAGCGCTTTGGACCT ATATCGTCGGCCTGTGCAGCACGTTCGCATCGCCCTTGATCGCTGAAGAG GGTTGGAAGGGGTGCGACGCCAGCCCGCAGTCTCTCGCGGAGTGGTGGTC GCCCGCAAAAGGTTGTGGAGAGGTCGTCTGCAAAATTTTGCGGTTTTCGA ACCGGCAATAGCAGTAGGGGCGGTTTCGGGGTTTGGGGACATGCATGCCG CCTACACGCTGTCTCTCTTGGGTGCCGCACTTGTACATAAGTATTCCAGA TGTTGGCAACAACAAAAAAATGAGGACGCAGTTGAGACGTTATTGCTTGC GGTGAGCGGTAAATGTTCGAGGTCACACGATTTCCTTCTGGTGCCGCATC GATTCGAACTTCGTGCGTATAAGGTAACTTTGCACCAACGTCCAGGCTCG CGGTCCACCCAGATCACCCTGTGGACCGCGTCTCAATCATATGGGAACCA CGG
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Coding sequence (CDS) from alignment at S-firma_F_contig1072:16710..19462-

>mRNA_S-firma_F_contig1072.975.1 ID=mRNA_S-firma_F_contig1072.975.1|Name=mRNA_S-firma_F_contig1072.975.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1440bp|location=Sequence derived from alignment at S-firma_F_contig1072:16710..19462- (Sphaerotrichia firma ET2_F female)
ATGGCTTCTTGCTACGGGAGCATATCCGCGCCGTTGGGTGGATCAGCGCA
AGGCCTTTCGTACCTCCCGATCAGGACCACACTTCCTGACGGCACTCCGG
TCGAAATTGATGTTTTCAGAGAAAGATGGCTTCTTGCTACGGGAGCATAT
CCGCGCCGTTGGGTGGATCAGCGCAAGGCCTTTCGTACCTCCCGATCAGG
ACCACACTTCCTGACGGCACTCCGGTCGAAATTGATGTTTTCAGAGAAAG
CGAGCATGCAGCAGGACATCGACTTCTGAATGGCGTTATCGAAGAGCGAG
CATGCAGCAGGACATCGACTTCTGAATGGCGTTATCGAAGAGGGTCTCTC
ATGGCCCTTTGAGGAAACTATGGGCATGGATGCCTTCCGGGCCTACTTCC
TCTCCCACGCGGCTTTCGTTGTGCGCGTCACCCCCCCCACTCCCGCCACA
GAAGCTCCCCCCGCAGGAGCACCGACCGGCGGCGCGACGGTCACGGCCGC
GACGAACAGCGAGGAGGACGAGCGCGTAGTGGTGTGGGGCGCGTTCTACA
TCAAGCCCAACTTTCCGGGCAGGTGCTCGCACGTGTGCAACGGAGGGTTC
ATCACGGACCCCCGCAGGAGGAGGAGGGGCGTGGCAAGGCTGATGGGCCA
CGCGTTCCTGCGGTTCGCGAAGGACCTGGGCTACAAGGCGAGCTACTTCA
ACTTGGGTCTCTCATGGCCCTTTGAGGAAACTATGGGCATGGATGCCTTC
CGGGCCTACTTCCTCTCCCACGCGGCTTTCGTTGTGCGCGTCACCCCCCC
CACTCCCGCCACAGAAGCTCCCCCCGCAGGAGCACCGACCGGCGGCGCGA
CGGTCACGGCCGCGACGAACAGCGAGGAGGACGAGCGCGTAGTGGTGTGG
GGCGCGTTCTACATCAAGCCCAACTTTCCGGGCAGGTGCTCGCACGTGTG
CAACGGAGGGTTCATCACGGACCCCCGCAGGAGGAGGAGGGGCGTGGCAA
GGCTGATGGGCCACGCGTTCCTGCGGTTCGCGAAGGACCTGGGCTACAAG
GCGAGCTACTTCAACTTGGTGTTCCGTAGTAATGAGGCATCTCTTCGACT
CTGGCGTGGCCTGGGTTTCACAGAGCTGGCGGTGGTTCCCAAAGCGGGCC
GCCTGAAGGGGATCGAAGGGCTGGTGTTCCGTAGTAATGAGGCATCTCTT
CGACTCTGGCGTGGCCTGGGTTTCACAGAGCTGGCGGTGGTTCCCAAAGC
GGGCCGCCTGAAGGGGATCGAAGGGCTGGTGGATGCCATTCAGTTCCACT
ACGACTTGGAGTCTCTCCGCGGAGAAGACCTCCCGGAGGACCTACGGGGA
TCTACGTAAGTGGATGCCATTCAGTTCCACTACGACTTGGAGTCTCTCCG
CGGAGAAGACCTCCCGGAGGACCTACGGGGATCTACGTAA
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