mRNA_S-firma_F_contig107.947.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 645 bits (1663), Expect = 2.760e-221 Identity = 382/631 (60.54%), Postives = 451/631 (71.47%), Query Frame = 2
Query: 44 MGDHVDLTLDSEDEALQAAIRASLSNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKRPQTDSSDHQKSSNGKRPRCWVEPSPQQPPLFRLLSTSPTDRARNGSVGLQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAA--LHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRRKAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNK-------HKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTA----EAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAF--SSTDHTGSSWPGV 1891
M D VDLT DSED+ LQAAIRASLS+ S XXXXXXXXXXXXXXXXXXXXXXXXXXX +P ++PPL+RLLSTSP+DRA GSVGL DLLSGDFESAL+ NYMVD LL++ PRLGSVPV +VHG K ++L+SQC NP +KL PE+P+YGT+H KMIILKFPTG+RV VLTANF+ VDVTDKSQ VWYQDFP+R + +C F++ ++ +L KVGGPA+ F TL +YDFR ARVALVPSVPGTG N HKG+D H+YGHMR+RALL REKE GT A+L+ GGHKV+ Q+SS+AS + P WL E+L SFMP EDE G + P R + EA+A LLE LRV+WPSVEAVRTSS+GWI+GGSICCN NMYGG +K P+M YR+N P PEL+P+LRKW+GNP+ +R RDAPHIK++LRYRE A G E RVDG++VAW L+TSSNLS SA G+L K ++ LTLRSFE+GVMFLPSLL P + A+ FTCTPG GLTQR PL+ Y+CE GK LPL LLPLPYVLPAPRYDF KSQD ERPWV DQ SS D G +W G+
Sbjct: 1 MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXQPF-EKPPLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAV--NPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDE--GKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGT----ETRVDGDEVAWFLLTSSNLSRSAWGYLNK----ASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEAWQGI 604
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 254 bits (649), Expect = 4.170e-72 Identity = 182/536 (33.96%), Postives = 257/536 (47.95%), Query Frame = 2
Query: 332 LFRL--LSTSPTDRARNGSVGLQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFP----------------RRKAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDE-AEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
LFRL L +P +R ++GLQ+L G++ L++NYM D+ L + PRL VPVV+VHGE+ A+ +C GN +P YGTHHTKM +L +PT RV + TANF+++D +K+Q VW+QDF +++A DFE +++YL +G P F + L ++DF A VAL+PSVPG H GK H+YGH+R+RALL + H ++ Q SS+ S D + E S MPG + A GGS+ P + L ++WPSV VR S +GW +G ++ C +NM +P + KY LRKW + R PHIKT+ R+ D K + VD W ++TSSNLS +A G K S Q +RS+ELGV+FLPS + L+ TP A +P L+PLPY P Y+ +D+ PWVWD D G+ +
Sbjct: 51 LFRLTRLKDAP-ERHNRYAIGLQELFEGEYTQCLLTNYMYDLPWLFASCPRLHDVPVVLVHGERDRHAM--TQECKGYGNVTPVAPYLPIP-YGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKALGEDDASEEKKQHQKQAAVADFERDLIEYLSTLGTPVVTFCKELSRFDFSTATVALIPSVPGA----HTGKAMHKYGHLRVRALLKH-------FAVAPSDHPLICQFSSLGSL--DEKWLFGEFAGSLMPGPTQLASGGSTLPIKA-----------LHIIWPSVNDVRNSVEGWNAGRAVPCPLKNM------KPFLHKY------------LRKWTPPSALHRQNAMPHIKTYARF---------DPKRDGCVD-----WAILTSSNLSKAAWGAYQKNQS----QFLIRSYELGVLFLPSASSH------------QHLSVVGTPAANTEDS---------------IPTRLMPLPYAFPLTTYN--PKEDE---PWVWDLVRDEPDVYGNCY 490
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN) HSP 1 Score: 249 bits (637), Expect = 1.350e-70 Identity = 180/513 (35.09%), Postives = 242/513 (47.17%), Query Frame = 2
Query: 389 LQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRR-------------KAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVL--PLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
L DLL GDF L++NYM D+ L PRL VPVV+VHGE+ + +C N +P YGTHHTKM++ +P VRV + TANF+S D K+Q +WYQDF + + DFE +V YL +G P F L+++DF +ARVALVPSVPG HKGKD +YGH+R+R LL M ++ + ++ Q SS+ S D + E ES +PG+ +S P + L V+WP+VE VR S +GW SG SI C +NM +P + KY LRKW R PHIK++ R+ + G ++ W +VTSSNLS +A G L K + Q +RS+ELGVMFLP LLGR + G + RL E V P +LLPLPY P Y+ + PWVWD D G+++
Sbjct: 47 LSDLLEGDFSRCLLANYMFDLPWLFTECPRLKEVPVVLVHGERDRQGM--TKECRDYSNVTPVAPPLPIP-YGTHHTKMLVALYPERVRVAIFTANFLSNDWNTKTQGLWYQDFGLKVLTDSDEEEKEAVARSSSDFEADLVHYLSSLGAPVKLFCGELKRFDFSSARVALVPSVPGV----HKGKDMEKYGHLRVRKLLK-------MYKIPPTDNPLICQFSSLGSL--DEKWLFGEFAESLLPGKKHI-SSTSMPVQA-----------LHVIWPAVEDVRNSLEGWNSGRSIPCPLKNM------KPFLHKY------------LRKWMPPAELHRQNAMPHIKSYARFNASEDKAG------------ELDWAIVTSSNLSKAAWGSLQKNKT----QFMIRSYELGVMFLPPLLGRHSN--------------------AGTSPRLVTIGSKAAEHSDVAEQPTELLPLPYSFPLTTYN-----PKNDEPWVWDLVREKPDIFGNAY 472
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: W2QLN8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QLN8_PHYPN) HSP 1 Score: 249 bits (637), Expect = 1.940e-70 Identity = 178/516 (34.50%), Postives = 247/516 (47.87%), Query Frame = 2
Query: 389 LQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRR-------------KAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTRE-----KESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
L DLL G+F L++NYM D+ L PRL VPV++VHGE+ + +C N + +P YGTHHTKM++ + VRV + TANF+S D K+Q +WYQDF + + DFE +V YL +G P F L+++DF ARVALVPSVPG HKGKD +YGH+R ++L M ++ + ++ Q SS+ S D + E ESF+PG+ + +S P + L ++WPSVE VR S +GW SG SI C +NM +P + KY LRKW+ R PHIK++ R+ + G ++AW +VTSSNLS +A G L K + QL +RS+ELGVMFLP LLGR +G P + +T A + P +LLPLPY P Y+ + PWVWD S D G+++
Sbjct: 47 LSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGERDRQGM--TKECREYSNVTPVVPPLPIP-YGTHHTKMLVALYSEKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLGAPVKLFCAELKRFDFSTARVALVPSVPGV----HKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGSL--DEKWLFGEFAESFLPGK-KIISSTSMPIQA-----------LHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------KPFLHKY------------LRKWKPPSELHRQNAMPHIKSYARFNPSDDGAG------------ELAWAIVTSSNLSKAAWGTLQKNKT----QLMIRSYELGVMFLPPLLGRQRNGTP----------------SRLVTIASKAAEHSDVAGSDTQPTELLPLPYSFPLTTYN-----PKNDEPWVWDLVRESPDIFGNAY 486
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM) HSP 1 Score: 246 bits (627), Expect = 6.170e-69 Identity = 183/516 (35.47%), Postives = 252/516 (48.84%), Query Frame = 2
Query: 389 LQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVP-QYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRRKAETC-----------------DFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
L DLL G+F L++NYM D+ L PRL VPV++VHGE+ + K + A P P +P +GTHHTKM++ +P VRV + TANF+S D K+Q VW+QDF + + DFE+ +V YL +G F L+++DF A VAL+PSVPG HKGKD RYGH+R+R LL ++ + + +N ++ Q SS+ S D + E ESF+PG+ SS P + L ++WPSVE VR S +GW SG SI C +NM +P + KY LRKW R PHIK++ R+ + A G + W +VTSSNLS +A G L KK + Q +RS+ELGVMFLP LL +GG + L + A G + + E + P +LLPLPY P Y+ QD+ PWVWD S D G+++
Sbjct: 58 LHDLLEGEFTRCLLTNYMYDLPWLFSECPRLRQVPVLLVHGERDRQGMTKKCREYANVTPVA----PPLPIPFGTHHTKMLVALYPDKVRVAIFTANFLSGDWNTKTQGVWFQDFSLKILDDSEXXXXXXXXTASSRGGNDFEEDLVHYLSSLGAQVKLFCGELKRFDFSRAHVALIPSVPGV----HKGKDMERYGHLRVRKLL----KTFNVPQTDN---PLICQFSSLGSL--DEKWLFGEFAESFLPGKKNI-SASSMPVQA-----------LHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------KPFLHKY------------LRKWTPPSVLHRQNAMPHIKSYARFDPSDEAAGA------------LDWAIVTSSNLSKAAWGTLQKKKT----QFMVRSYELGVMFLPPLLAHQ------NGGTSPHLVTIGSKAAAGHSGV------EDFESSEKQPKELLPLPYGFPLTTYN--PKQDE---PWVWDLVRDSPDIFGNAY 493
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.170e-68 Identity = 180/513 (35.09%), Postives = 243/513 (47.37%), Query Frame = 2
Query: 389 LQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRR---------------KAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
L +LL G+F L++NYM D+ L PRL VPV++VHGE+ + +C N + P YGTHHTKM++ +P VRV + TANF+S D K+Q VW+QDF + A DFE +V YL +G F R L+++DF +ARVALVPSVPG HKGKD +YGH+R+R LL M ++ + ++ Q SSM S D + E ESF+PG+ + + L ++WPSVE VR S +GW SG SI C +NM +P + KY +RKW R PHIK++ R+ + AVG ++ W +VTSSNLS +A G L K + Q +RS+ELGVMFLP LL +PP C P +T A + P LLPLPY P Y+ K + PWVWD S D G ++
Sbjct: 75 LNELLEGEFTRCLLTNYMYDLPWLFAECPRLRDVPVLLVHGERDRQGM--MKECREYSN-VTPVAPPLPIAYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGVWFQDFGLKVLDDGEEEKEAVAPNSAAINDFEADLVHYLSSLGAQVKIFCRELKRFDFSSARVALVPSVPGY----HKGKDMEKYGHLRVRKLLK-------MYQVPPTDNPLICQFSSMGSL--DEKWLFGEFAESFLPGKKNI------------SPTPMPVQALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------KPFLHKY------------IRKWTPPEELHRQNAMPHIKSYARFNPSDEAVG------------ELDWAIVTSSNLSKAAWGALQKNKT----QFMIRSYELGVMFLPQLL-KPPG--------------NCPP-VRLVTLGSKAAGHSGVAVSESQPTALLPLPYGFPLTTYNPKKDE-----PWVWDLVRDSPDIFGGAY 504
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA) HSP 1 Score: 238 bits (607), Expect = 9.370e-64 Identity = 176/530 (33.21%), Postives = 253/530 (47.74%), Query Frame = 2
Query: 362 DRARNGSVGLQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVP-QYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFP-------------------RRKAETCDFEDCVVDYLEKVGGPAAEF-GRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKV--LPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
D ++GL++LL G FES L+SNYMVD+ LL PRL VPV++VHGE+ A+ + C A+ N + L P +P YGTHH KM++ +P VRV + TANF+++D +K+Q VW+QDF R DFE +V YL +G A F R + ++DF A VAL+PSVPG HKG D ++GH+R+R LL + ++ + ++ Q SSM S D + E +S + G+ G +G + +A L ++WPSVE VR S++GW +G ++ C +NM +P + KY LRKW R PHIKT+ R+ + D +D W ++TSSNLS +A G L K S Q +RS+ELGV+FLP LL + T G+ +L + + + P +LPLPY P YD + PWVWD D G+ +
Sbjct: 312 DAHNQHAMGLRELLDGAFESVLLSNYMVDVDWLLGECPRLRDVPVLLVHGERDRGAM--LTACRALAN--VTLVAPPLPIAYGTHHAKMLVAVYPEKVRVAIFTANFIAIDWENKTQGVWFQDFGLKTLSDDAEADAVGSAVTVERGPAELDFEADLVAYLSALGARVAAFCKRHVARFDFSGANVALIPSVPGV----HKGSDMEKFGHLRVRKLLQ-------LLKVPPSDNPLICQFSSMGSL--DEKWLFGEFAQSLLKGKK----GITGTSAPVQA--------LHLIWPSVEDVRNSTEGWNAGRAVPCPLKNM------KPFLHKY------------LRKWAPPERLHRKNAMPHIKTYARFEAPTSGRDDDDAAAGTLD-----WAILTSSNLSKAAWGALQKGDS----QFLIRSYELGVLFLPQLLRK-------------------TSGSDSSASKLVVLGSKAADRSRAGEAPF-VLPLPYSFPLKTYD-----PKVDEPWVWDLVREDPDVFGNCY 760
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A0W8DNG8_PHYNI (HIT domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DNG8_PHYNI) HSP 1 Score: 231 bits (588), Expect = 7.720e-63 Identity = 181/552 (32.79%), Postives = 249/552 (45.11%), Query Frame = 2
Query: 389 LQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKIN-----AALHLKSQCDAIGNPALKLHK--------------PEVPQ----YGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRR-------------KAETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDA------------------HRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
L DLL G+F L++NYM D+ L PRL VPV++VHGE+ A + LK Q + N L L + P VP YGTHHTKM++ + VRV + TANF+S D K+Q +WYQDF + + DFE +V YL +G P F L+++DF ARVALVPSVPG K K + + +RYG +R M ++ + ++ Q SS+ S D + E ESF+PG+ + +S P + L ++WPSVE VR S +GW SG SI C +NM +P + KY LRKW+ R PHIK++ R+ + G ++AW +VTSSNLS +A G L K + QL +RS+ELGVMFLP LLGR +G P + +T A + P +LLPLPY P Y+ + PWVWD S D G+++
Sbjct: 68 LSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGERDRQGYDVAYIPLKCQLMKLMNVLLILCRYRMTKECREYSNVTPVVPPLPIPYGTHHTKMLVALYSEKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLGAPVKLFCAELKRFDFSTARVALVPSVPGVHKGKGEEEALSSIIIRLLMLTFENLYLLNRYGEIRASPRTQASCSLLKMYKIPPTDNPLICQFSSLGSL--DEKWLFGEFAESFLPGK-KIISSTSMPIQA-----------LHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------KPFLHKY------------LRKWKPPSELHRQNAMPHIKSYARFNPSDDGAG------------ELAWAIVTSSNLSKAAWGTLQKNKT----QLMIRSYELGVMFLPPLLGRQRNGTP----------------SRLVTIASKAAEHSDVAGSDTQPTELLPLPYSFPLTTYN-----PKNDEPWVWDLVRESPDIFGNAY 550
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 239 bits (610), Expect = 1.020e-62 Identity = 175/523 (33.46%), Postives = 241/523 (46.08%), Query Frame = 2
Query: 380 SVGLQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVP-QYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFP------------RRKAE---------TCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGRPPSGAPGDGGDAEDLAFTCTPGATGLTQRLPLARRYECEPGKVLPLDLLPLPYVLPAPRYDFGKSQDDGERPWVWDQAFSSTDHTGSSW 1882
+VGL DLLSG+F L++NYM D+ L PRL VPVV+VHGE+ A+ Q D G + P +P YGTHHTKM+++ + T VRV + TANF+ +D +K+Q VW+QDF R++A+ DF+ +V+YL +G P F R L ++DF A VALVPSVPG H G +YGH+R+R +L + H ++ Q SS+ S D + E ES MP R + L ++WPSV+ VR S +GW +G ++ C +NM +P + KY LRKW + R PHIKT+ R+ D + VD W L+TSSNLS +A G L K G+ QL +RS+ELGV+FLP L R L G + + + Y LPLPY P YD + + PWVWD D G+ +
Sbjct: 642 AVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLADVPVVLVHGERDREAM----QHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYLSTLGAPVVAFCRELERFDFSTATVALVPSVPGY----HTGAAKDKYGHLRVRRILQH-------FNVPRSDHPLICQFSSLGSL--DEKWLFGEFAESLMP-------------RPLPTSTPMPIKSLHIVWPSVDDVRNSIEGWHAGRAVPCPLKNM------KPFLHKY------------LRKWTPPAALHRQNAMPHIKTYARF---------DPSQPGAVD-----WALLTSSNLSKAAWGALQKNGT----QLMIRSYELGVLFLPQLSSR-------------SLGQFKVIGVDNNSAEVSSSTVY------------LPLPYGFPIKTYDPARDE-----PWVWDLVREDPDVFGNCY 1068
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.450e-61 Identity = 158/422 (37.44%), Postives = 212/422 (50.24%), Query Frame = 2
Query: 386 GLQDLLSGDFESALISNYMVDMGLLLQAQPRLGSVPVVVVHGEKINAALHLKSQCDAIGNPALKLHKPEVPQYGTHHTKMIILKFPTGVRVVVLTANFVSVDVTDKSQAVWYQDFPRRK------------AETCDFEDCVVDYLEKVGGPAAEFGRTLRQYDFRAARVALVPSVPGTGKNKHKGKDAHRYGHMRIRALLTREKESGTMARLENGGHKVVVQVSSMASRSPDPTFWLHELLESFMPGEDEAEGGSSGPARTAEAKAELLEDRLRVLWPSVEAVRTSSKGWISGGSICCNAENMYGGGFKRPDMGKYRANDPTPELKPVLRKWRGNPSADRARDAPHIKTFLRYREAAAAVGPDGKEEARVDGNQVAWCLVTSSNLSTSALGFLGKKGSPSAPQLTLRSFELGVMFLPSLLGR 1615
GL DLL GDF L++NYM D+ L PRL VPV++VHGE+ + +C N +P YGTHHTKM++ +P VRV + TANF+S D K+Q +WYQDF + A +FE + YL +G P F L+++DF ARVALVP+VPG HKGKD +YGH+R+R LL K T + ++ Q SS+ S D + E ESF+PG+ +S P + L ++WPSVE V+ S +GW SG SI C +NM +P + KY LRKW R PHIK++ R+ P+ +D W +VTSSNLS +A G L K + Q +RS+ELGV+FLP LLGR
Sbjct: 172 GLNDLLEGDFTRCLLTNYMFDLPWLFAECPRLRDVPVLLVHGERDRQGM--TKECREYANVTSVAPPLPIP-YGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVLADSEDEEKEAVAGASEFEADLAHYLSSLGAPVKVFCGELKRFDFSTARVALVPAVPGV----HKGKDMEKYGHLRVRKLLKMYKVPPT-------DNPLICQFSSLGSL--DEKWLFGEFAESFLPGKRNI-SSTSMPTQA-----------LHIIWPSVEDVQNSLEGWSSGRSIPCPLKNM------KPFLHKY------------LRKWTPPKEVHRQNAMPHIKSYARF-------SPNDDAAGELD-----WAIVTSSNLSKAAWGSLQKNNT----QFMIRSYELGVIFLPQLLGR 531 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig107.947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig107.947.1 >prot_S-firma_F_contig107.947.1 ID=prot_S-firma_F_contig107.947.1|Name=mRNA_S-firma_F_contig107.947.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=619bp MGDHVDLTLDSEDEALQAAIRASLSNSSGGGGGGGASSSGTSFNSNGNKSback to top mRNA from alignment at S-firma_F_contig107:43487..50174+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig107.947.1 ID=mRNA_S-firma_F_contig107.947.1|Name=mRNA_S-firma_F_contig107.947.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6688bp|location=Sequence derived from alignment at S-firma_F_contig107:43487..50174+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig107:43487..50174+ >mRNA_S-firma_F_contig107.947.1 ID=mRNA_S-firma_F_contig107.947.1|Name=mRNA_S-firma_F_contig107.947.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3714bp|location=Sequence derived from alignment at S-firma_F_contig107:43487..50174+ (Sphaerotrichia firma ET2_F female)back to top |