mRNA_S-firma_F_contig107.945.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: D8LE93_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE93_ECTSI) HSP 1 Score: 227 bits (578), Expect = 4.770e-68 Identity = 130/159 (81.76%), Postives = 135/159 (84.91%), Query Frame = 3
Query: 15 MSVQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGC--MYDKMFKATGGARMGMRARASQNGKLARTEGGEDG 485
MSVQLLGKRELKRL+SVANDGAG GYSGFAKGMMAKMGWAEGQGLGK+ QGRSTYVQVKKKDDN+GLGKEKAQQN VNDQWYFNAFDSALANMGGK XXXXXXX MYDKMFKATGGARMGMRARASQNGKL+RTEGG+DG
Sbjct: 1 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGGQDG 159
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A835Z8F6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F6_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.090e-30 Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 3
Query: 27 LLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYDKMFKATGGARMGMRARASQNGKLART 467
+LGKR LK L + AND AG+GYS F++ MM KMGW EGQGLGKD QG ++Y++VK+K+D+AGLG+EK ++ +QWYFNAF+ A+A +Y +MF+ +GGARMGMRARASQ K RT
Sbjct: 4 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIA--AAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERT 148
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A7S2V0B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B5_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.550e-21 Identity = 81/165 (49.09%), Postives = 116/165 (70.30%), Query Frame = 3
Query: 21 VQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDS-----ALANMGGKXXXXXXXXXXXXXXXXXXXXXX----------GGGCMYDKMFKATGGARMGMRARASQNGKLARTE 470
+Q++GK+++K +++ ++ +G+ S FA+ M KMGW EG GLGK+ GR+ +V+V K++++ GLG E+ ++ +V+DQW+ NAF+S A AN K XXXXXXXXXXXXXXXXXXXX G ++ ++FKATGGARMGMRARA+Q+ K RTE
Sbjct: 1 MQVVGKKQMKWMSTNLSEASGSAVSDFARRQMEKMGWKEGMGLGKNSDGRTEHVRVVKREESMGLGVEQKERESVSDQWWLNAFESVSNNLAKANTDNKKKXXXXXXXXXXXXXXXXXXXXXXXXXXPDAAAGQEVWQELFKATGGARMGMRARATQSAKWERTE 165
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A7R9YDY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDY2_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.690e-21 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3
Query: 27 LLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQ-QNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYDKMFKATGGARMGMRARASQNGKLARTEGGEDGA 488
L+ K L+ L N+ +G S FA+ + KMGW+EG+GLGK G ++V+VKK++DNAGLG E ++ Q V W+ +AF A+ +GGK +++FKATGGAR+GMRARA QNGK AR E G DGA
Sbjct: 4 LVSKDTLRGLRGKLNESVASGPSDFARRQLMKMGWSEGKGLGKREHGTVSHVRVKKREDNAGLGTETSRLQAIVAGDWWTDAFAGAVQKLGGKRAKREPTM--------------------EELFKATGGARLGMRARAKQNGKWARAERGLDGA 138
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A7S3M264_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M264_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.120e-17 Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 3
Query: 27 LLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEK--AQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYDKMFKATGGARMGMRARASQNGKLARTEGGEDGADAS 497
LL K+ + ++ S N+ AG+ S FA M KMGW EG+GLGK G S ++ + K+++++GLG E A+ ++ W+ +A+ S L + K XXXXX XX YD +FKATGGAR+GMRARA Q GKL RTE ++GA+AS
Sbjct: 9 LLNKKTVMKMGSQMNENAGSKPSSFALKQMEKMGWTEGKGLGKTESGISKHITIVKREESSGLGSEAVDARAAAASENWWHDAYSSNLKLIKMKHGKKSKSSXXXXXLDGEXXEKNDAPPSYDDLFKATGGARLGMRARADQKGKLKRTED-KNGAEAS 166
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A196SBI7_BLAHN (G patch domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBI7_BLAHN) HSP 1 Score: 90.5 bits (223), Expect = 3.450e-17 Identity = 69/152 (45.39%), Postives = 90/152 (59.21%), Query Frame = 3
Query: 21 VQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYD--KMFKATGGARMGMRARASQNGKLARTE 470
+ LGKR++ LAS+ ND A S + K +M KMGW++G+GLGKD G + +KKKD+ G+G ++ Q N ND W+FNA+DSA G XXXXXXXXXX G +Y ++F A G R+GMRAR SQ GK R E
Sbjct: 7 IHRLGKRQMDYLASMQNDVATEATSAYGKKLMQKMGWSDGEGLGKDGTGIKKSIVIKKKDNEEGVGFKEQQSNRWNDTWWFNAYDSAAKKSG------RSSTSXXXXXXXXXXSSNGKQKVYTDAELFAACKGRRLGMRARKSQKGKWERCE 152
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A1W0A5E1_9STRA (G-patch domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5E1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 6.180e-16 Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 3
Query: 18 SVQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYDK-----MFKATGGARMGMRARASQNGKLAR 464
+V ++GK+ L +L +AN+ A + S FAK MAKMGW EG+GLGK QG +T+++VK++++NAG+G E A+ ++QW++N +D M K XXXXXXXXXXXXXXX + D+ +F ATGG G RA S GKL R
Sbjct: 5 TVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWTEGKGLGKQEQGIATHIKVKRREENAGVGTEAAKTEEQSNQWWYNVYDK----MASKIVVEASDXXXXXXXXXXXXXXXXSRDLADEPTDEQLFAATGGRLFGRRAYGSCKGKLMR 154
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A8K1CNH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNH9_PYTOL) HSP 1 Score: 83.2 bits (204), Expect = 1.090e-14 Identity = 38/86 (44.19%), Postives = 60/86 (69.77%), Query Frame = 3
Query: 18 SVQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFD 275
+V L+GK+ + +L S+ N+ A + S FA+ M KMGW +G+GLGKD QG +TYV+VKK+++N G+G E + +QW++N +D
Sbjct: 8 AVPLVGKKYMNKLGSMVNESAASEISAFARKQMEKMGWTDGKGLGKDEQGMTTYVRVKKREENMGVGGETVKVEQQQNQWWYNVYD 93
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: A0A067CL68_SAPPC (G-patch domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CL68_SAPPC) HSP 1 Score: 82.0 bits (201), Expect = 1.810e-14 Identity = 68/154 (44.16%), Postives = 102/154 (66.23%), Query Frame = 3
Query: 15 MSVQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMY----DKMFKATGGARMGMRARASQNGKLAR 464
++V ++GK+ L +L +AN+ A + S FAK MAKMGW++G+GLGK+ QG +T+++VK++++N G+G E A+ ++QW++N ++ + + XXXXXXXXXXXXXXXXXX M +++F ATGG G RA S GKL R
Sbjct: 4 VTVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWSQGKGLGKEEQGIATHIKVKRREENTGVGTEAAKTEEQSNQWWYNVYNKMASKIVVDAXXXXXXXXXXXXXXXXXXKKRSRAEMDVPTDEQLFAATGGKLFGRRAYGSCKGKLMR 157
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Match: D8MAK2_BLAHO (G-patch domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAK2_BLAHO) HSP 1 Score: 80.1 bits (196), Expect = 2.220e-14 Identity = 61/142 (42.96%), Postives = 87/142 (61.27%), Query Frame = 3
Query: 21 VQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQGRSTYVQVKKKDDNAGLGKEKAQQNNVNDQWYFNAFDSALANMGGKXXXXXXXXXXXXXXXXXXXXXXGGGCMYDKMFKATGGARMGMRARASQ 446
+Q LG++ ++ L+S+ N A +G S + K ++ MGWA+G+GLGK+ G + VKKKDD G+G ++ Q N + W+FNA+DSA+ +G XXXXXXXXXXXX ++F A G R+GMRAR SQ
Sbjct: 7 IQRLGRKHMEMLSSMQNISASSGTSVYGKKILKMMGWADGEGLGKEGTGIKESIIVKKKDDEEGVGYKEEQSNKWGECWWFNAYDSAVKKIGSSSTXXXXXXXXXXXXSTPKVYSDA------ELFAACKGRRLGMRARRSQ 142 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig107.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig107.945.1 >prot_S-firma_F_contig107.945.1 ID=prot_S-firma_F_contig107.945.1|Name=mRNA_S-firma_F_contig107.945.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=282bp MSVQLLGKRELKRLASVANDGAGTGYSGFAKGMMAKMGWAEGQGLGKDMQback to top mRNA from alignment at S-firma_F_contig107:38475..40942+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig107.945.1 ID=mRNA_S-firma_F_contig107.945.1|Name=mRNA_S-firma_F_contig107.945.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2468bp|location=Sequence derived from alignment at S-firma_F_contig107:38475..40942+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig107:38475..40942+ >mRNA_S-firma_F_contig107.945.1 ID=mRNA_S-firma_F_contig107.945.1|Name=mRNA_S-firma_F_contig107.945.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1692bp|location=Sequence derived from alignment at S-firma_F_contig107:38475..40942+ (Sphaerotrichia firma ET2_F female)back to top |