mRNA_S-firma_F_contig1067.909.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1067.909.1
Unique NamemRNA_S-firma_F_contig1067.909.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: D8LD03_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD03_ECTSI)

HSP 1 Score: 683 bits (1762), Expect = 7.680e-239
Identity = 390/505 (77.23%), Postives = 430/505 (85.15%), Query Frame = 1 
Query:   49 MDLLLDVVGPVFLQKRAVAADGMTVTADGYVPRG----SVSGQNVRGAERSSSSDSTGGLGPVLVDATLRLALFAGCVYTSVRFTQFLGKLKERENQAATRIYLKNKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQGVSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQAAQTIPAREFARSLRENARETALAQAQAAEDAXXXXXXXXXXXXXXXXXXXXXXVAASGPSSAGDAAVRDPNAVLRDTLVDLSRRTIGAARNVGRMAVAAAESHPRGDALLRALLGPAESSVEDAGYARRSALQMRGISQADFAAALENVR 1551
            MDLLLDV+GPV LQ+R VAADG   TADGY+PRG    S + ++  G E   SS+S   LGPVL++ATLR+ALFAGCVYTSVRFTQFLGKLKERE+QAATRI+LK KLP+R DI MD L FN+HE+AVAQD+VAS DLETTFDMIGGLGDLR+EIMDIVTLACSREA LQGV APRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMV+AIFS+ANKLAPSIIFIDEIDCFMRTRNV+EQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLP T DQRE ILQLI+R+YRL+DGV L WVAA+T GFSGSDLDALFQAAQT+PAREFAR+LRENARE    + QA    XXXXXXXXXXXXXX         + + P++  DAA     AVLR+T+VDL RRT+GAARNVGRMA AAAE HP+GDA+LRA+LGPA  S E+ G   R ALQMRGISQ DF AAL+N +
Sbjct:    1 MDLLLDVLGPVVLQRRPVAADGRAATADGYIPRGGGGHSTTTRSAHGRESDHSSES---LGPVLLEATLRVALFAGCVYTSVRFTQFLGKLKEREDQAATRIFLKAKLPSRVDIEMDRLHFNSHEMAVAQDIVASSDLETTFDMIGGLGDLRDEIMDIVTLACSREAQLQGVGAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVSAIFSLANKLAPSIIFIDEIDCFMRTRNVLEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPETADQREQILQLIARRYRLSDGVDLGWVAAQTEGFSGSDLDALFQAAQTVPAREFARALRENAREE---RTQAXXXXXXXXXXXXXXXXXXEATARREHSSRTTPAANLDAA-----AVLRETVVDLGRRTMGAARNVGRMAAAAAEGHPQGDAILRAILGPARPSAEEGG-GTRPALQMRGISQDDFRAALDNAK 493
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A7S2D8L1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D8L1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.250e-65
Identity = 132/255 (51.76%), Postives = 172/255 (67.45%), Query Frame = 1 
Query:  388 SLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQG----VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLA---DGVCLRWVAARTGGFSGSDLDALFQAAQTIPAREFA 1131
            +L+ N +E  + + +V  + L  TFD IGGL + ++EI+D V L   R     G    VS PRG+L  G PGTGKTMLA+AIA+ESGATFIN++M  +  K+ GE  K+VA +FS+A KLAPSI+FIDE+D F+R R   ++  ++ +K EFMT WDGLLT+ + PVMVLG TNRP +ID AILRRLPR F +GLP T DQR+HIL L+ +  R A   D +C   +A  T G+SGSDL  L +AA   P RE A
Sbjct:  111 NLELNEYERVIVEGIVDPKTLSVTFDQIGGLEEQKKEIIDAVILPLKRPDLFAGRNSLVSQPRGVLFYGAPGTGKTMLAKAIARESGATFINLKMSTIMNKYFGESNKLVAGVFSLAQKLAPSIVFIDELDSFLRQRGG-DESALLNMKAEFMTHWDGLLTDPASPVMVLGATNRPYDIDQAILRRLPRSFEIGLP-TEDQRKHILMLLLQHERTAGRIDALC-EDLAGVTEGYSGSDLKELCRAALLQPIRELA 362
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A7S4JN38_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN38_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.070e-63
Identity = 126/259 (48.65%), Postives = 170/259 (65.64%), Query Frame = 1 
Query:  388 SLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQG----VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSR----PVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGV--CLRWVAARTGGFSGSDLDALFQAAQTIPAREFAR 1134
            +LD N +E A+A+DVV   D+ T F  +GG+  ++ E+ D+V L   R    +     V+ PRGILL G PGTGKTMLA+AIAKESGATF+NVR+ ++  KW GE  K+V+A FS+A KLAPS++FIDEID F+  R+  E      +K+EF+TLWDG++T+ +R    PV+VLG TNRP ++D AILRRLPR F +GLP   D R  IL+L  +K ++ +     +  VA  T G+SGSDL  L + A   P RE  R
Sbjct:  104 ALDLNEYETAIAEDVVDPGDITTAFSDVGGIDGIKAELWDLVVLPLLRPDLFRSDSGLVTPPRGILLYGAPGTGKTMLAKAIAKESGATFVNVRLSSIMDKWFGESNKLVSATFSLARKLAPSVVFIDEIDTFLNQRDSSEGSATSTMKSEFLTLWDGMMTDSARDADRPVIVLGATNRPYDVDSAILRRLPRTFEIGLP-NFDSRLQILELFLKKQKMTEKARNMIPSVAKCTEGYSGSDLKELCRCAAMEPIREMTR 361
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: D8SU46_SELML (AAA domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SU46_SELML)

HSP 1 Score: 222 bits (565), Expect = 8.960e-62
Identity = 126/282 (44.68%), Postives = 178/282 (63.12%), Query Frame = 1 
Query:  400 NAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSR-EAYLQG--VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQAAQTIPAREF--------------ARSLRENARETALAQAQAAEDA 1194
            N++E  +A DV+   D++ TFD IGGL D++  + ++V L   R E +  G  +   +G+LL G PGTGKT+LA+AIAKES A FINVR+  +  KW G+ +K+V A+FS+A KL PSIIFIDE+D F+  R   E + +  +KTEFM LWDG  T++S  VMVL  TNRP E+D AILRRLPR F VG+P    QR  IL++I +   + D V + ++A+ T  +SGSDL  L + A  +P R+               AR L+++  ET L  A++++DA
Sbjct:   62 NSYEDMIACDVINPEDIDVTFDSIGGLEDVKSSLFELVILPLQRPELFAHGKLLGPQKGVLLYGPPGTGKTLLAKAIAKESRAVFINVRIATLMSKWFGDAQKLVTAVFSLAYKLQPSIIFIDEVDSFLGQRRATEHESMTHMKTEFMALWDGFTTDQSARVMVLAATNRPWELDEAILRRLPRAFEVGMP-DARQRASILRVILKDEAVEDEVNIDYLASLTENYSGSDLTELCKQAAYLPIRDLLEKEKNGHSSELQTARPLKQSDFETVLQNARSSKDA 342
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A6J1SWL8_FRAOC (ATPase family AAA domain-containing protein 1-like n=2 Tax=Thripinae TaxID=153976 RepID=A0A6J1SWL8_FRAOC)

HSP 1 Score: 220 bits (561), Expect = 2.460e-61
Identity = 125/311 (40.19%), Postives = 196/311 (63.02%), Query Frame = 1 
Query:  226 LVDATLRLALFAGCVYTSVRFTQFLGKLK-ERENQAATRIYLK------NKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQG---VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQAAQTIPAREF 1128
            ++ AT++L++ A C Y +++F   LG+L  + E ++A +   K      N+L   +D N+ SL  + HE+ +A+ ++  +D+ TT+D I GL ++ +E+ + V L   ++          AP+G+LL G PG GKTM+A+AIA+E+G  FIN+ M  V  KW GE +K+  A+F++A KL P I+FIDEID F+R R+  + +    VK +FM+LWDGL T+ S  V+V+GTTNRP ++D AILRR+P  F + +P  V QR+ IL+ I +   +A+ V LR +A  + GFSGSDL  L ++A     ++F
Sbjct:   10 ILAATVKLSVLAACTYVTLKF--ILGQLDPDSEAESAYKSAYKKAKAILNRLGLSNDKNLKSL--SQHEMMIAKGLIDPQDITTTWDQIAGLDNVLQELRETVILPIQKKELFADSHLTRAPKGVLLFGPPGCGKTMIAKAIAREAGCNFINLDMSCVTDKWYGESQKLACAVFTLAVKLQPCIVFIDEIDSFLRNRSSFDHEATAMVKAQFMSLWDGLTTDPSCTVIVMGTTNRPQDLDRAILRRMPASFHIDMPNAV-QRQQILETILKTEPVANDVNLRRLAEISDGFSGSDLRELCRSASVYRLKDF 315
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A7S3PU04_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU04_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.060e-61
Identity = 123/259 (47.49%), Postives = 164/259 (63.32%), Query Frame = 1 
Query:  388 SLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQG----VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTER--SRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGV--CLRWVAARTGGFSGSDLDALFQAAQTIPAREFARSL 1140
            +L+ N +E A+A DV+   D+   F  +GG+ D++ E+ D+V L   R          VS PRGILL G PGTGKTMLA+AIAKESGATF+NVR+ A+  KW GE  K+V+  FS+A KLAPS+IFIDEID F+  R+  E      +K+EF+TLWDG+ ++   S P+ VLG TNRP ++D AILRRLPR F +GLP  +  RE IL L   K  + +     +  +A  T G+SGSDL  L +AA   P RE  + +
Sbjct:   98 ALELNEYESAIADDVIDPTDITVAFKDVGGIDDIKAELWDLVVLPIVRPDLFFSESGLVSPPRGILLFGAPGTGKTMLAKAIAKESGATFVNVRLSAIMDKWFGESNKLVSGTFSLARKLAPSVIFIDEIDTFLNQRDSSEGSATTSMKSEFLTLWDGMTSDAKDSPPITVLGATNRPYDVDSAILRRLPRTFEIGLP-NMKSREQILNLFLIKLSMTEEARQMIPTIARVTKGYSGSDLKELCKAAAINPIREITKEV 355
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A4D9D0B3_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0B3_9STRA)

HSP 1 Score: 222 bits (565), Expect = 4.150e-61
Identity = 119/249 (47.79%), Postives = 164/249 (65.86%), Query Frame = 1 
Query:  391 LDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQG----VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQAAQTIPARE 1125
            LD + +E  +A +V+ +  LE  FD IGGL   + EI ++  L   R          + +P+GIL  G PGTGKTMLA+AIA+ESGA FIN+RM  +  K+ GE  K+V+A+FS+ANKLAP+IIFIDEI+ F+R R   +    + +K EFMTLWDG+LTE + P+MVLG +NRP ++DPAILRRLPRQF + LP    + E +  L+  ++   + V L  +AA T G+SGSDL  L +AA  +P R+
Sbjct:   90 LDLSPYERIIANEVLDAEQLEGGFDTIGGLEQQKREIFELAVLPLKRPDLFNKRGKLLGSPKGILFYGAPGTGKTMLAKAIARESGAAFINLRMSTLTNKYFGESNKLVSAVFSLANKLAPTIIFIDEIESFLRVRGRGDDAPWISLKAEFMTLWDGILTESAVPIMVLGASNRPYDLDPAILRRLPRQFEIPLPDPKQRAEILRLLLKEEHVDYESVKLGALAAETEGYSGSDLKELCRAAVMMPVRD 338
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A4RU67_OSTLU (AAA domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RU67_OSTLU)

HSP 1 Score: 219 bits (559), Expect = 1.190e-60
Identity = 133/316 (42.09%), Postives = 186/316 (58.86%), Query Frame = 1 
Query:  235 ATLRLALFAGCVYTSVRFTQFLGKLKERENQAATRIYLKNKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSR-EAYLQG--VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGV------CLRW-VAARTGGFSGSDLDALFQAAQTIPAREFARSLRENA 1152
            + L+  L  GC           G  +   N+  ++  ++ K      +   +LD N +E  +A DV     ++  FD IGGL D ++ + ++V L   R E + +G  +   +G+LL G PGTGKT+LA+A+AKES A FINVR   +Q KW G+ +K+V+A+F++A KL PSIIFIDEID F+ TR   E +    +KTEFMTLWDG  T+ +  VMVLG TNRP ++D AILRRLPR F VGLP T +QR  +L +  +   L  G       C  W +AA+T GFSGSDL  L + A   P R+F ++ R+ A
Sbjct:   10 SVLQELLLIGCSALLSMIVLNFGLKRLDPNRQTSKAAIERKKELASRLGRPNLDTNVYEDVIAADVANPDHIDVRFDSIGGLEDTKQSLYELVILPLMRPELFARGKLLQPAKGVLLYGPPGTGKTLLAKALAKESRACFINVRSSTLQSKWFGDAQKLVSAVFTLAWKLQPSIIFIDEIDSFLGTRKSGEHEATSTMKTEFMTLWDGFNTDDNAQVMVLGATNRPWDVDEAILRRLPRAFEVGLPNT-EQRAQVLAVTLKGENLEAGFISPSQDCPLWKIAAQTEGFSGSDLRDLCKQAAYGPVRDFLQAERKQA 324
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: A0A1Y5I6T5_OSTTA (AAA+-type ATPase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I6T5_OSTTA)

HSP 1 Score: 227 bits (578), Expect = 1.630e-60
Identity = 135/290 (46.55%), Postives = 179/290 (61.72%), Query Frame = 1 
Query:  313 ERENQAATRIYLKNKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSR-EAYLQG--VSAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGV------CLRW-VAARTGGFSGSDLDALFQAAQTIPAREFARSLRENA 1152
            ER+ + ATR+   N            LD N +E  +A DV     ++ TF+ IGGL D ++ + ++V L   R E + +G  +   +G+LL G PGTGKT+LA+A+AKESGA FINVR   +Q KW G+ +K+V+A+F++A KL PSIIFIDEID F+ TR   E +    +KTEFMTLWDG  T+ S  VMVLG TNRP ++D AILRRLPR F VGLP  V+QR  +L +  +   L DG       C  W +A+ T GFSGSDL  L + A   P R+F +  RE A
Sbjct:  354 ERKKELATRLGRPN------------LDTNVYEDVIAMDVANPDHIDVTFNSIGGLEDTKQSLYELVILPLVRPELFARGKLLQPAKGVLLYGPPGTGKTLLAKALAKESGACFINVRSSTLQSKWFGDAQKLVSAVFTLAFKLQPSIIFIDEIDSFLGTRKSGEHEATATMKTEFMTLWDGFNTDDSAQVMVLGATNRPWDVDEAILRRLPRAFEVGLP-NVEQRAQVLAVTLKGENLDDGFISQERSCALWMIASETEGFSGSDLRDLCKQAAYGPVRDFLKIEREKA 630
[Close]
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Match: R4X7C7_TAPDE (Putative Membrane-spanning ATPase n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X7C7_TAPDE)

HSP 1 Score: 218 bits (555), Expect = 2.140e-60
Identity = 128/306 (41.83%), Postives = 183/306 (59.80%), Query Frame = 1 
Query:  241 LRLALFAGCVYTSVRFTQFLGKLK----ERENQAATRIYLKNKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREEIMDIVTLACSREAYLQGVS----APRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVMEQDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQFVVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQAAQTIPAREFAR 1134
            LR+ L A   Y ++ +   L  L     +R+  +A R     +L A  D +    D N +E ++A +VV + D++ TF+ IGGL D+  ++ + + L  +        +    AP+G+LL G PG GKTMLA+A+A  SGATFIN+ +  +  KW GE  K+V A+FS+A KL PSIIFIDEID F+R R   + + +  +K EFM+LWDGL TE    ++VLG TNRP +ID AILRR+P++F + LP  V QR+ IL LI +  +  D   +  +A RTGG SGS +  L ++A   P REF R
Sbjct:   23 LRIILAASTTYAAIFY--LLSSLDPNSAKRKGDSAKRREAVKRLQATTDGHK-LQDLNEYEQSIASEVVFATDIKVTFESIGGLDDIINDLKESIILPLTYPELFASATGLLGAPKGVLLYGPPGCGKTMLAKALASSSGATFINMHISTLTDKWFGESNKLVNALFSLARKLQPSIIFIDEIDAFLREREKNDHEAMAMIKAEFMSLWDGLATESDTKIVVLGATNRPNDIDSAILRRMPKRFNIQLP-NVQQRQKILNLILKGSKQDDAFSIPDLARRTGGMSGSAIQELCRSAAMKPVREFIR 324
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1067.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD03_ECTSI7.680e-23977.23AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2D8L1_9STRA1.250e-6551.76Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4JN38_9STRA1.070e-6348.65Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
D8SU46_SELML8.960e-6244.68AAA domain-containing protein n=3 Tax=Selaginella ... [more]
A0A6J1SWL8_FRAOC2.460e-6140.19ATPase family AAA domain-containing protein 1-like... [more]
A0A7S3PU04_9STRA3.060e-6147.49Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9D0B3_9STRA4.150e-6147.79AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A4RU67_OSTLU1.190e-6042.09AAA domain-containing protein n=1 Tax=Ostreococcus... [more]
A0A1Y5I6T5_OSTTA1.630e-6046.55AAA+-type ATPase n=2 Tax=Ostreococcus tauri TaxID=... [more]
R4X7C7_TAPDE2.140e-6041.83Putative Membrane-spanning ATPase n=1 Tax=Taphrina... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1067contigS-firma_F_contig1067:14123..20398 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LD03
Preferred nameATAD1
PFAMsAAA
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K01509
KEGG ReactionR00086
KEGG Pathwayko00230,ko04742,map00230,map04742
GOsGO:0000003,GO:0000166,GO:0002090,GO:0002092,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005778,GO:0005886,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007389,GO:0007444,GO:0007447,GO:0007450,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0008104,GO:0008144,GO:0008150,GO:0009888,GO:0009893,GO:0009953,GO:0009987,GO:0010604,GO:0010646,GO:0010648,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017076,GO:0017111,GO:0019222,GO:0019867,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023057,GO:0030100,GO:0030154,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031903,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0033036,GO:0033365,GO:0034613,GO:0035220,GO:0035222,GO:0035295,GO:0035639,GO:0036094,GO:0042579,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0044703,GO:0044743,GO:0045041,GO:0045184,GO:0045202,GO:0045211,GO:0045807,GO:0046907,GO:0048190,GO:0048232,GO:0048259,GO:0048260,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050804,GO:0050805,GO:0050877,GO:0050890,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051966,GO:0051967,GO:0055085,GO:0060255,GO:0060429,GO:0060627,GO:0065002,GO:0065007,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0097060,GO:0097159,GO:0097367,GO:0098588,GO:0098590,GO:0098794,GO:0098805,GO:0099177,GO:1901265,GO:1901363,GO:1990542
Evalue8.26e-243
EggNOG OGsCOG0464@1|root,KOG0737@2759|Eukaryota
EC3.6.1.3
DescriptionATP binding
COG categoryO
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-01_001750.1
Exons9
Model size2287
Cds size1596
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815606.5373847-UTR-S-firma_F_contig1067:14122..141701622815606.5373847-UTR-S-firma_F_contig1067:14122..14170Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1067 14123..14170 +
1696949449.6049707-UTR-S-firma_F_contig1067:14122..141701696949449.6049707-UTR-S-firma_F_contig1067:14122..14170Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1067 14123..14170 +
1622815606.6592436-UTR-S-firma_F_contig1067:19755..203981622815606.6592436-UTR-S-firma_F_contig1067:19755..20398Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1067 19756..20398 +
1696949449.70804-UTR-S-firma_F_contig1067:19755..203981696949449.70804-UTR-S-firma_F_contig1067:19755..20398Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1067 19756..20398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815606.5481162-CDS-S-firma_F_contig1067:14170..144491622815606.5481162-CDS-S-firma_F_contig1067:14170..14449Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 14171..14449 +
1696949449.6185193-CDS-S-firma_F_contig1067:14170..144491696949449.6185193-CDS-S-firma_F_contig1067:14170..14449Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 14171..14449 +
1622815606.5608466-CDS-S-firma_F_contig1067:15583..156821622815606.5608466-CDS-S-firma_F_contig1067:15583..15682Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 15584..15682 +
1696949449.6284478-CDS-S-firma_F_contig1067:15583..156821696949449.6284478-CDS-S-firma_F_contig1067:15583..15682Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 15584..15682 +
1622815606.5721214-CDS-S-firma_F_contig1067:16072..161561622815606.5721214-CDS-S-firma_F_contig1067:16072..16156Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 16073..16156 +
1696949449.6382332-CDS-S-firma_F_contig1067:16072..161561696949449.6382332-CDS-S-firma_F_contig1067:16072..16156Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 16073..16156 +
1622815606.582999-CDS-S-firma_F_contig1067:16581..166861622815606.582999-CDS-S-firma_F_contig1067:16581..16686Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 16582..16686 +
1696949449.6486318-CDS-S-firma_F_contig1067:16581..166861696949449.6486318-CDS-S-firma_F_contig1067:16581..16686Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 16582..16686 +
1622815606.5948617-CDS-S-firma_F_contig1067:17107..172111622815606.5948617-CDS-S-firma_F_contig1067:17107..17211Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17108..17211 +
1696949449.6584697-CDS-S-firma_F_contig1067:17107..172111696949449.6584697-CDS-S-firma_F_contig1067:17107..17211Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17108..17211 +
1622815606.6057813-CDS-S-firma_F_contig1067:17528..176681622815606.6057813-CDS-S-firma_F_contig1067:17528..17668Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17529..17668 +
1696949449.6688206-CDS-S-firma_F_contig1067:17528..176681696949449.6688206-CDS-S-firma_F_contig1067:17528..17668Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17529..17668 +
1622815606.6186857-CDS-S-firma_F_contig1067:17861..180661622815606.6186857-CDS-S-firma_F_contig1067:17861..18066Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17862..18066 +
1696949449.678653-CDS-S-firma_F_contig1067:17861..180661696949449.678653-CDS-S-firma_F_contig1067:17861..18066Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 17862..18066 +
1622815606.6303968-CDS-S-firma_F_contig1067:18519..190131622815606.6303968-CDS-S-firma_F_contig1067:18519..19013Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 18520..19013 +
1696949449.6898081-CDS-S-firma_F_contig1067:18519..190131696949449.6898081-CDS-S-firma_F_contig1067:18519..19013Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 18520..19013 +
1622815606.643318-CDS-S-firma_F_contig1067:19669..197551622815606.643318-CDS-S-firma_F_contig1067:19669..19755Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 19670..19755 +
1696949449.6985676-CDS-S-firma_F_contig1067:19669..197551696949449.6985676-CDS-S-firma_F_contig1067:19669..19755Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1067 19670..19755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1067.909.1prot_S-firma_F_contig1067.909.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1067 14171..19755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1067.909.1

>prot_S-firma_F_contig1067.909.1 ID=prot_S-firma_F_contig1067.909.1|Name=mRNA_S-firma_F_contig1067.909.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=532bp
MDLLLDVVGPVFLQKRAVAADGMTVTADGYVPRGSVSGQNVRGAERSSSS
DSTGGLGPVLVDATLRLALFAGCVYTSVRFTQFLGKLKERENQAATRIYL
KNKLPARDDINMDSLDFNAHEIAVAQDVVASRDLETTFDMIGGLGDLREE
IMDIVTLACSREAYLQGVSAPRGILLSGVPGTGKTMLARAIAKESGATFI
NVRMGAVQQKWVGEGEKMVAAIFSMANKLAPSIIFIDEIDCFMRTRNVME
QDHVVRVKTEFMTLWDGLLTERSRPVMVLGTTNRPLEIDPAILRRLPRQF
VVGLPATVDQREHILQLISRKYRLADGVCLRWVAARTGGFSGSDLDALFQ
AAQTIPAREFARSLRENARETALAQAQAAEDAAAAAAAAEEEDERAARVE
AAATVAASGPSSAGDAAVRDPNAVLRDTLVDLSRRTIGAARNVGRMAVAA
AESHPRGDALLRALLGPAESSVEDAGYARRSALQMRGISQADFAAALENV
RPTGEMAAAFAAGRIVAGVESAEQRRRPQEQ*
back to top

mRNA from alignment at S-firma_F_contig1067:14123..20398+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1067.909.1 ID=mRNA_S-firma_F_contig1067.909.1|Name=mRNA_S-firma_F_contig1067.909.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6276bp|location=Sequence derived from alignment at S-firma_F_contig1067:14123..20398+ (Sphaerotrichia firma ET2_F female)
CCGCGTGTTCCGGCGTGCTGCGTGAGGCTTGCAACGTGCGCAATCAACAT
GGACCTGTTACTCGATGTTGTCGGCCCTGTCTTTCTTCAGAAACGAGCGG
TTGCGGCTGACGGAATGACCGTCACCGCCGATGGGTACGTGCCTCGAGGG
TCGGTGTCAGGACAGAACGTTCGCGGGGCCGAGAGGAGCAGCAGCAGCGA
CAGCACTGGCGGCCTAGGACCCGTGCTGGTGGACGCCACGCTTCGTCTTG
CGTTGTTCGCAGGCTGTGTTTATACGAGCGTGCGGTTTACTCAGTTCCTC
GGGAAGCTCAAGGAGAGGGAGAACCAAGTAAGTGTGCAACAACTTGTAGT
CTCGTCTGGCACCACCAGGCCTGGGATCTGACCTACGCAAGCGGAGTACG
GCCGTGGGCGTAAACTATGTACATCACCGTGATTTGTGAACGGGTTGCAG
GCGAGCAGGCGAGGCTTCTCGCCCTACGGCTTATTGTGTGCGCTTTGTGC
CACGAACGCCGTAACAGACTGGTATGCCTTTTTGGAGATGGCCCTACAGC
AGTAATTTAGTAGAATGCCTTTTTGGAGATGGCCCTACAGCAGTAATTTA
GTAGATCTCACGTGTAGTTCTATTTAGAGACGCATCCATCTCGAGACAGA
ACGACAGCTGAGAGCGCACGCTTCCGCGACCTCCCCCTCGCTCGAACTTG
TATATAGGATAAAGGTGAATCCTCTTGACGATGCCCAAAAAAGGGACAGT
TTGGGGCACGCTTCCGCGACCTCCCCCTCTCTCAATTTTGTATAAGGATA
TGTAGGTGAATCCTCTTGACGATGCCCAACAAAGGACAGTTTGGGGACGT
TGACGATCAGCCCACGGCCTCGAAAACTTCGCGGGGTGTACACCTTCGCC
TGCTGTGTGGGCTGCTGCCGCTAACTAACCAGGCCAGCAGCCCCAACCAC
GTCCCCCTGTTTTTCATGGTGTCCCTCTTGCATGTACGACTGCTGTAGCC
CAGCGCACCAAGTTTGAATTGATGTGCCTACAAGCAAGGAATCTGCGGGG
ACACTGTGCCGTTTCACCAGGTCTCACCCCGGTGCTCACCGAAGAGCGCG
ACAATCAAGGAGGGATGCGTTGTAAACCGTCGGCGAATGATGAGCTACTA
ACACGATACCGGTATACCACTAGTGTAAACCCCTCTCTATTCTTCTCTGC
ACAGCAGAGTTTGTCCTAAGAGCCATTCGACCAAGCCTGGCTGCGTGTTG
CAGAGACCTAAAAATGTTCAGTAATCGTACGGCCGGGGCATGTGACCAAC
CTCAACAAGCGAAAGGGCGAAGCAGCCAGCGCAACAAGCAGTGCACTTCA
ACTAACCCCGCCCTCTGCCCTCTGCCCCCTGCCTCCCCGGCGCCGGATTC
CCCGTCGCCCACCCACCCACCCACCCCCTGCGCGCCGGCGCTCATCGTTG
GGTTTCCAAAGGCTGCAACCAGGATTTATCTCAAGAACAAGCTGCCGGCC
CGGGATGACATCAACATGGATAGCCTCGATTTCAACGCCCACGAGATCGC
CGTGGCCCAGGTGTGATAATGAGTAGAAAATTTTCGTTCCAAGTTTCTGC
TCCAATCTTGTTGCCCCCTGACCCCCCCCCTCCCTTCCTCCTTACCGCGA
TGGTCTTGTTCGCTGGAAAGCATTGCAGCACAGCTGCAGCCGTAAACGGA
TGCCAGGGGGGAGCTAATCGTATAGCTGCTAAGTACGGATAACTCTCACT
CCTCTTGTGTTCGCATCCACCGCGCTACTTGTACCCGAACCGGCTGAGCC
CATCAACGAACGACTGCTGTGGTCTCGAACTGAACTGAACGGGTAAATGG
CAAAACGAATCACGTAACCAAATCCCGTATTGCGTCTTGATCTTGCCTGA
TCCTGTGTGTGCTTCCGCGTGTCTCCCGTCTCCTGTTTTTGTTGTTGCAG
GATGTTGTCGCCTCCAGAGACCTGGAGACGACATTCGACATGATCGGAGG
GCTGGGAGACCTGAGAGAAGAGATAATGGATATTGTGAGTCTCGGAACCT
AAATGGGTTGCAGGGAGTAAGTGAATTACACCGCTCGCTTGCCCGTTCTG
CCCCCTCCCGTGCTGGTTCTTGCTCCGCGGTTGCCGTCACACACCCATCA
AACCCAACCAAAAGAAGTACGAATTAATAGAAGAGTATGTTGTGTGCATA
TTTTTTATCATGGCGCTGGGTGCTGTTGTGTGTACTATCCTCGGAGCTCC
CGCTTCTCCATGAGAGCGTTGGAGTACGTGGGCGACTGCCACGACGCCGC
GAATGTGTCCACATGTCGGTCGCGGCGCAGCGTCGACTCAACGCACTTCA
GGGCAGCGTGTCTTCTGAACACTGCTGTGGCGGGCTCCAGCCAACTCGCA
CGTTCCCGCCCCCTTGTTTAAGACTGAAGACCGGGCCCCGTTCTTTGTCT
CTCGGGCAGGTGACGCTGGCGTGCTCGAGAGAGGCGTACCTACAGGGGGT
TAGCGCACCACGAGGCATTCTTTTGAGCGGAGTGCCGGGGACGGGGAAGA
CGATGCTGGCTCGGGTGCGAAAAACACACAGTTTGGCTGTACATTTTCGT
CCAACGGGTGTGTTGCTCTCAGCGCGTTCCCCTTGCCAACGCCATGTGCT
GGCCGTGTTTTAGAGTATCTCGACATGCCTGGAACAGAGGAACACCTGGC
GAAACGGCCGCGAGCGCCACGCCAAAGACCGCGAACGAAACTCAGCGATT
GCCTTCGACTCTGTGCAGCAACGGTAACAGCAGTAGTAGCATTAGTAGAA
CACGGGGCTTTAAAGCCTGTTCTCATGGAGGAGAGCGGTGCCTCCAAGGT
TTGAATAATGATGTGATGAAGTTTCGCGCGACTGCCGAAATGTCCGAGAG
ACAAACCTCTCTCGGCTGTGTTGGCTCCTCTCACGACGTCCGTTTTCACC
GCTCGCCAACCCGCCTTGCTCGCAAACGGTACCAGGCCATCGCGAAGGAG
TCAGGCGCGACGTTCATAAACGTGCGCATGGGCGCCGTGCAGCAGAAGTG
GGTCGGAGAGGGCGAGAAGATGGTGGCGGCAATATTCAGGTGCTGCATGT
CTGGTGCCATGCACGAGAGGCTGGTTTGCCAACATCTTTCGTGTCTCCAA
AACGTTCCCGTTACTACTTGTTGGCATTGTTTGCGTTTATTGGTACATAT
GGCAATCGGCCCTCCAGGGCCGGCTTTTCAGCTTTATTTCTTCGCATCAT
GGACGTTTCAAAATCGGGCATTTAACGACACACGCGTGGTTGATTTCTCC
CCGCGCCCTGGTCGCCCCGTGAGCGCTAAGAGCTGCCCCTTGGATTGTGA
CAAACGCATCGCCATCCTTCCGTGCGCTCTCTCCCCTGCGTTTTGATTCT
GTGTAGCATGGCCAACAAGCTAGCCCCGTCCATCATCTTTATCGACGAGA
TCGACTGCTTCATGAGGACCCGCAACGTGATGGAGCAGGACCATGTCGTT
AGGGTCAAAACGGAGTTCATGACGCTGTGGGATGGCCTTCTCACCGGTAA
GCTTGCCTCTGGTGTCACGCCCGCTCTCACAAATCTCGGGTTGTTTTGTC
TGCGTTTTCACTTGTCGCCTGCAAGGATCGCACACTTGATTTCTAGTCCT
TGGTTCTGCTTGTTGTGGCGGCCGTTTTCATCACCTCTGGCGGTCCTTCT
TGGCATCGTGCTGAAATCGTGTTTTGTGTGTTTTTCCAGAGCGTTCCCGT
CCGGTGATGGTCCTCGGCACCACGAACCGTCCGCTCGAGATCGACCCCGC
GATACTGCGGCGCCTCCCGAGGCAGTTTGTGGTGGGCCTGCCGGCGACGG
TGGATCAGCGGGAGCATATCCTGCAGCTCATCTCGCGGAAGTACAGGCTG
GCGGACGGAGTGTGCCTGCGCTGGGTGGCGGCGCGGACTGGCGGGTGAGC
CGTGGATGGACGCGGCGGGTTGCATGCGATGCCTTGTTCTCCATCGTTTG
TCTGTAGTCTTCAAACGTTGGAGAGAGGTGGCGTTGGGGGAGAATGCTGC
ACTGTCGGGCGCGTTCTAAGGGTGGCGCTGGCAGCGGACGTCACTCGTTC
CGTCTGTAGGAGAAGTGTGAGGGCTCGCTTCCGGCGTTCCTCGGCAAGAA
ATGCTTCTGACAGTTGTCATGAGGGCTCCGGCTACCGTTAGTGCCGTTTC
GTTGAGCCTCCAGTGTTGCGCTCGCAAACTCGGTCCGTCAACTGAAGGCG
TGCCTGGTGCACTACGGCACGTTCCATGCCACCGCCCCCGAAGTCCACTC
AGAGCACGCCAGTCATTCCCGCTAAAATCGTTCTCCTTTTGCCACCCCCC
CCTCTTCCCTCCTCCTGTGCCGCTCGTGCCGGTCTGGGGTACGTCAGTTT
CTCCGGCAGCGATCTGGACGCGCTGTTTCAGGCGGCGCAGACGATCCCGG
CGCGAGAGTTCGCTCGCTCCCTGCGGGAAAACGCCCGGGAGACCGCACTG
GCACAGGCGCAGGCTGCAGAGGACGCGGCAGCAGCGGCGGCAGCGGCAGA
AGAAGAAGACGAACGCGCTGCACGAGTGGAAGCCGCCGCTACCGTCGCCG
CCTCGGGCCCGTCGTCGGCTGGAGATGCCGCCGTGCGAGACCCGAACGCC
GTTCTCCGTGACACGCTGGTGGACCTTAGTCGGAGGACGATCGGGGCGGC
GAGGAACGTGGGCAGGATGGCTGTGGCGGCGGCGGAGTCGCACCCGCGGG
GGGACGCTCTGCTGAGGGCTCTGCTGGGCCCGGCGGAGTCGTCGGTAGAG
GACGCCGGGTACGCGAGAAGATCGGCGTTGCAGATGCGGGGTATTTCCCA
GGCGGATTTCGCTGCCGCGCTGGAGAACGTTCGCCCTACAGGTATGTGTG
TTGGTATACATAGGTGTTTCTTTCATCTTGGATTTGTTTTGAGGGTCTTG
GTTGCAAAGCGGCGCCGCGGGGAGGCTAGAGGTCGAACAGGCGACGCTCG
GCACCTCAGCAGATTGATGGTGACGAGGTGGTGCCAGTGTTTCTTGGCGT
GTCTGATGACTCCAGGAGCGCGTCTGCTGATACAAATAACCGTCTCGAGC
TAAGGCAAAAAAAAATGTTTTCATTCCACCAGTCTCGTGGAAGTACGGTT
TGTTCCCGAGTGCACAGGTTGAGAACATATGGAATAACAAGAATCGTTGA
ACCCCTCAGCAGCGCCAAACTTGCTTCTTGTGTAGAACGCGTACAACCCT
CAGCCTCCTTGTCTTCAGATGCCCCGTCCAAGTTTATTATAGCCGCGAGT
GACATGACCAGACCCGTCCTTGTGACCGAGCGCGCAAAGTACTCCAATCC
CAAGAAGTACGGGGTGGCGTTAGTTAATACACCCCCTAGACCACTGCACC
CTGCGACAAGCTTTTTAGACTGTAATTTGCCATCACAGGGGTGTGTTATC
TTATGTCACGTACCGTATGCAACCGAGGTAACACACTCTCCTACATCGAT
GCCCGCTGCTGGCCCCGTGCCGACGTTGTACCCCTTAACCCTACCAGGCG
AAATGGCGGCAGCCTTTGCAGCAGGTCGCATCGTAGCTGGAGTAGAGAGT
GCGGAGCAGAGAAGGCGGCCCCAAGAACAGTAGGGTCGCAATCTGTACGT
GGTACGTACCACGCCGCACGGAGTTGTACGATAAACGTTTTTTTTCTTCG
CTTGCTTGGGGACTGCAGCTCTTAAAGGCGACATTCTAGTCCTTCCGACA
TTGTTTTTTTTTCAAGCACCCACGATAAGTAAGTCCATGAGGCTGTATGT
ACGTGTGTATACATAGATGCGTTTGAGACGTGCCCAAGAAGAGTAGCAGC
GCATTCTATGCGTACCACTCTACACGGTATTGTGCGCGGACTTTCCCCCC
CTTTTTTTAGCTTGTTTGGGTTTGCAGCCCTTAAAAGCAAGATCGTTTTC
GACCTAGTACCGGTGCTTGTTTTCAGGCACCCACAAGAACTATTCGAAGC
GGCTGTATGTGTGTAAAACCCGCCGACTGGTGTGCGGAAATACGAATAGC
CCATGCTGCGGTATTAATTCTAGTTTAGAGGTTGCCTTCCTGCCTAAAGA
CTATCGAATGACTACCGGCGGCTGTCGTCATCTGTGCCTTGTTGCGATAT
CTCCCTCGAAGTGTTGTGTCTTGTTTTGGACCTGGTTCCCTTGCTTCAAA
TCGAGAGCCAAACGGACTTTTCCTTTATTTTTTTTTCTGGACGCGCAACA
TTGCATCATCTGTCTGCATCTCTTCC
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig1067:14123..20398+

>mRNA_S-firma_F_contig1067.909.1 ID=mRNA_S-firma_F_contig1067.909.1|Name=mRNA_S-firma_F_contig1067.909.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3192bp|location=Sequence derived from alignment at S-firma_F_contig1067:14123..20398+ (Sphaerotrichia firma ET2_F female)
ATGGACCTGTTACTCGATGTTGTCGGCCCTGTCTTTCTTCAGAAACGAGC
GGTTGCGGCTGACGGAATGACCGTCACCGCCGATGGGTACGTGCCTCGAG
GGTCGGTGTCAGGACAGAACGTTCGCGGGGCCGAGAGGAGCAGCAGCAGC
GACAGCACTGGCGGCCTAGGACCCGTGCTGGTGGACGCCACGCTTCGTCT
TGCGTTGTTCGCAGGCTGTGTTTATACGAGCGTGCGGTTTACTCAGTTCC
TCGGGAAGCTCAAGGAGAGGGAGAACCAAATGGACCTGTTACTCGATGTT
GTCGGCCCTGTCTTTCTTCAGAAACGAGCGGTTGCGGCTGACGGAATGAC
CGTCACCGCCGATGGGTACGTGCCTCGAGGGTCGGTGTCAGGACAGAACG
TTCGCGGGGCCGAGAGGAGCAGCAGCAGCGACAGCACTGGCGGCCTAGGA
CCCGTGCTGGTGGACGCCACGCTTCGTCTTGCGTTGTTCGCAGGCTGTGT
TTATACGAGCGTGCGGTTTACTCAGTTCCTCGGGAAGCTCAAGGAGAGGG
AGAACCAAGCTGCAACCAGGATTTATCTCAAGAACAAGCTGCCGGCCCGG
GATGACATCAACATGGATAGCCTCGATTTCAACGCCCACGAGATCGCCGT
GGCCCAGGCTGCAACCAGGATTTATCTCAAGAACAAGCTGCCGGCCCGGG
ATGACATCAACATGGATAGCCTCGATTTCAACGCCCACGAGATCGCCGTG
GCCCAGGATGTTGTCGCCTCCAGAGACCTGGAGACGACATTCGACATGAT
CGGAGGGCTGGGAGACCTGAGAGAAGAGATAATGGATATTGATGTTGTCG
CCTCCAGAGACCTGGAGACGACATTCGACATGATCGGAGGGCTGGGAGAC
CTGAGAGAAGAGATAATGGATATTGTGACGCTGGCGTGCTCGAGAGAGGC
GTACCTACAGGGGGTTAGCGCACCACGAGGCATTCTTTTGAGCGGAGTGC
CGGGGACGGGGAAGACGATGCTGGCTCGGGTGACGCTGGCGTGCTCGAGA
GAGGCGTACCTACAGGGGGTTAGCGCACCACGAGGCATTCTTTTGAGCGG
AGTGCCGGGGACGGGGAAGACGATGCTGGCTCGGGCCATCGCGAAGGAGT
CAGGCGCGACGTTCATAAACGTGCGCATGGGCGCCGTGCAGCAGAAGTGG
GTCGGAGAGGGCGAGAAGATGGTGGCGGCAATATTCAGGCCATCGCGAAG
GAGTCAGGCGCGACGTTCATAAACGTGCGCATGGGCGCCGTGCAGCAGAA
GTGGGTCGGAGAGGGCGAGAAGATGGTGGCGGCAATATTCAGCATGGCCA
ACAAGCTAGCCCCGTCCATCATCTTTATCGACGAGATCGACTGCTTCATG
AGGACCCGCAACGTGATGGAGCAGGACCATGTCGTTAGGGTCAAAACGGA
GTTCATGACGCTGTGGGATGGCCTTCTCACCGCATGGCCAACAAGCTAGC
CCCGTCCATCATCTTTATCGACGAGATCGACTGCTTCATGAGGACCCGCA
ACGTGATGGAGCAGGACCATGTCGTTAGGGTCAAAACGGAGTTCATGACG
CTGTGGGATGGCCTTCTCACCGAGCGTTCCCGTCCGGTGATGGTCCTCGG
CACCACGAACCGTCCGCTCGAGATCGACCCCGCGATACTGCGGCGCCTCC
CGAGGCAGTTTGTGGTGGGCCTGCCGGCGACGGTGGATCAGCGGGAGCAT
ATCCTGCAGCTCATCTCGCGGAAGTACAGGCTGGCGGACGGAGTGTGCCT
GCGCTGGGTGGCGGCGCGGACTGGCGGAGCGTTCCCGTCCGGTGATGGTC
CTCGGCACCACGAACCGTCCGCTCGAGATCGACCCCGCGATACTGCGGCG
CCTCCCGAGGCAGTTTGTGGTGGGCCTGCCGGCGACGGTGGATCAGCGGG
AGCATATCCTGCAGCTCATCTCGCGGAAGTACAGGCTGGCGGACGGAGTG
TGCCTGCGCTGGGTGGCGGCGCGGACTGGCGGTTTCTCCGGCAGCGATCT
GGACGCGCTGTTTCAGGCGGCGCAGACGATCCCGGCGCGAGAGTTCGCTC
GCTCCCTGCGGGAAAACGCCCGGGAGACCGCACTGGCACAGGCGCAGGCT
GCAGAGGACGCGGCAGCAGCGGCGGCAGCGGCAGAAGAAGAAGACGAACG
CGCTGCACGAGTGGAAGCCGCCGCTACCGTCGCCGCCTCGGGCCCGTCGT
CGGCTGGAGATGCCGCCGTGCGAGACCCGAACGCCGTTCTCCGTGACACG
CTGGTGGACCTTAGTCGGAGGACGATCGGGGCGGCGAGGAACGTGGGCAG
GATGGCTGTGGCGGCGGCGGAGTCGCACCCGCGGGGGGACGCTCTGCTGA
GGGCTCTGCTGGGCCCGGCGGAGTCGTCGGTAGAGGACGCCGGGTACGCG
AGAAGATCGGCGTTGCAGATGCGGGGTATTTCCCAGGCGGATTTCGCTGC
CGCGCTGGAGAACGTTCGCCCTACAGTTTCTCCGGCAGCGATCTGGACGC
GCTGTTTCAGGCGGCGCAGACGATCCCGGCGCGAGAGTTCGCTCGCTCCC
TGCGGGAAAACGCCCGGGAGACCGCACTGGCACAGGCGCAGGCTGCAGAG
GACGCGGCAGCAGCGGCGGCAGCGGCAGAAGAAGAAGACGAACGCGCTGC
ACGAGTGGAAGCCGCCGCTACCGTCGCCGCCTCGGGCCCGTCGTCGGCTG
GAGATGCCGCCGTGCGAGACCCGAACGCCGTTCTCCGTGACACGCTGGTG
GACCTTAGTCGGAGGACGATCGGGGCGGCGAGGAACGTGGGCAGGATGGC
TGTGGCGGCGGCGGAGTCGCACCCGCGGGGGGACGCTCTGCTGAGGGCTC
TGCTGGGCCCGGCGGAGTCGTCGGTAGAGGACGCCGGGTACGCGAGAAGA
TCGGCGTTGCAGATGCGGGGTATTTCCCAGGCGGATTTCGCTGCCGCGCT
GGAGAACGTTCGCCCTACAGGCGAAATGGCGGCAGCCTTTGCAGCAGGTC
GCATCGTAGCTGGAGTAGAGAGTGCGGAGCAGAGAAGGCGGCCCCAAGAA
CAGTAGGCGAAATGGCGGCAGCCTTTGCAGCAGGTCGCATCGTAGCTGGA
GTAGAGAGTGCGGAGCAGAGAAGGCGGCCCCAAGAACAGTAG
back to top