mRNA_S-firma_F_contig10649.879.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10649.879.1
Unique NamemRNA_S-firma_F_contig10649.879.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: D7FLZ1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ1_ECTSI)

HSP 1 Score: 567 bits (1462), Expect = 1.060e-198
Identity = 290/318 (91.19%), Postives = 295/318 (92.77%), Query Frame = 1 
Query:  289 QVEEQPVYDLPKEWKTMVSTLCLRTNFEPAELADLFQRFRQLAAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHRQGWLGHRASGTIDFQEYVMGFAGMARVLTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWLQEQELEVLVDPSEDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFIVNRGISGVLSTLEV 1242
            QVEE PVYDLPKEWKT+VSTLCLRTNFEPAELADLFQRFRQLA GTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNH         SGTIDFQEYVMGFAGMARVLTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKDP VAAKTEKLV WLQ Q L VLVDP+EDNELG DG  +GPVFMPEV RFDPG LATQ DFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMI RVL+AFRRPISVTLRTRLRGEVYSR+GQLERVFYSLNEFIVNRGISGVLSTLEV
Sbjct:   11 QVEEHPVYDLPKEWKTLVSTLCLRTNFEPAELADLFQRFRQLA-GTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNH---------SGTIDFQEYVMGFAGMARVLTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKDPVVAAKTEKLVHWLQSQGLTVLVDPTEDNELGDDGEAIGPVFMPEVGRFDPGHLATQTDFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMIKRVLDAFRRPISVTLRTRLRGEVYSREGQLERVFYSLNEFIVNRGISGVLSTLEV 318
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A835Z9J6_9STRA (ATP-NAD kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J6_9STRA)

HSP 1 Score: 379 bits (972), Expect = 3.890e-124
Identity = 203/307 (66.12%), Postives = 231/307 (75.24%), Query Frame = 1 
Query:  325 EWKTMVSTLCLRTNFEPAELADLFQRFRQLAAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHRQGWLGHRASGTIDFQEYVMGFAGMARVLTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWLQEQE-LEVLVDPSEDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFIVNRGISGVLSTLEV 1242
            +W  +   L LRTNF P EL DL+Q FR++A G+KEYL+  EFRRT++RNFGIM EEW  KYF+AFDRN          SGTIDF EYVMGFA MARVLTDKKA SLIGLSTG+NIVRSGR ARLFWD PPRRVAVIKKW+D EVA +T  LV WLQ  + L+VL+DPSED       R     F+P VARFDP  LA Q DF++ LGGDGT LKAA YFDD+ PIPP LA GLGSLGFLAPF+    ++MI RVL A   P++ TLRTRLRG+VYSR G L+  FYSLNEFIVNRG+SGVLSTLEV
Sbjct:   70 DWAQITKALKLRTNFTPEELEDLWQSFREIA-GSKEYLSRDEFRRTIKRNFGIMKEEWATKYFRAFDRND---------SGTIDFPEYVMGFAAMARVLTDKKAQSLIGLSTGANIVRSGRDARLFWDHPPRRVAVIKKWRDKEVARRTADLVDWLQRDKGLKVLLDPSEDPLTDPAQR-----FLPHVARFDPRHLAEQVDFMVTLGGDGTALKAASYFDDAHPIPPALALGLGSLGFLAPFSMRDARAMIERVLHADEEPMACTLRTRLRGDVYSRTGTLQHTFYSLNEFIVNRGLSGVLSTLEV 361
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A6H5K900_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K900_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.490e-56
Identity = 138/183 (75.41%), Postives = 142/183 (77.60%), Query Frame = 1 
Query:    1 NYHPPGYDSKGKQNPPDDGSPPSTALPTAKPXXSSDTPGIRRQAXXXXXXXXXXXXXXXXXXXXXXXXGEGGGPQDGDVDFEAGG---GESPVVYGALGQVEEQPVYDLPKEWKTMVSTLCLRTNFEPAELADLFQRFRQLAAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHRQ 540
            NYHPPGYDSKGKQNPP+ G   ++ LPTAKPXX           XXXXXXXXXXXXXXXXXXXXXXXX                    G S VVYGALGQ EE PVYDLPKEWKT+VSTLCLRTNFEPAELADLFQRFRQLA GTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHRQ
Sbjct:   32 NYHPPGYDSKGKQNPPEAGVSTASPLPTAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESTLNGVSDVVYGALGQAEEHPVYDLPKEWKTLVSTLCLRTNFEPAELADLFQRFRQLA-GTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHRQ 213
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A150GNZ3_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNZ3_GONPE)

HSP 1 Score: 118 bits (296), Expect = 2.890e-25
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 1 
Query:  664 SNIVRSGRSARLFWDGP-PRRVAVIKKWKDPEVAAKTEKLVRWLQEQELEVLVDPSEDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFIVNRGISGVLSTLEV 1242
            S  +R  R A L W+   P +V +IKK K+P  +AK +++  WL+ + ++V V+           RV+      E   FDP       DF I LGGDGTVL     F++  P+PPTL F +GSLGFL PF+ S   + + RVL+    P+  TLRTR R EV    GQLE V + LNE +V+RG       LE+
Sbjct:   36 SRALRLRRRALLQWEADSPSKVLIIKKPKNPAASAKLQEIGTWLKARGIQVFVE-----------RVVWATEFKEFEVFDPHVNRDAIDFCITLGGDGTVLYMTSLFEEDEPLPPTLCFAMGSLGFLTPFDASAALATLERVLDTSAEPLFCTLRTRKRCEVVY-DGQLEAVHHVLNECVVDRGAFPGAVLLEI 217
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A836BQ70_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQ70_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 1.790e-24
Identity = 77/191 (40.31%), Postives = 104/191 (54.45%), Query Frame = 1 
Query:  673 VRSGRSARLFWD-GPPRRVAVIKKWKDPEVAAKTEKLVRWLQEQELEVLVDPSEDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFIVNRGISGVLSTLEV 1242
            +R  R A L W  G P  V +IKK K+   +AK  ++ +WL E+ ++V V+           RV+      E A FDP   A   DF I LGGDGTVL     F+   P+PPTL F +GSLGFL PF+ +     + RVL+   +P+  TLRTR R EV    GQLE V + LNE +++RG     + LE+
Sbjct:   38 LRLRRRALLQWHAGCPSHVLIIKKPKNAAASAKLREIGQWLTERGIQVYVE-----------RVVWATEFKEFAVFDPRTNADVIDFCITLGGDGTVLYMTSLFEQDEPLPPTLCFAMGSLGFLTPFDAAHFAPTLERVLDTSSQPLFCTLRTRKRCEVVY-DGQLEAVHHVLNECVLDRGAFPGAALLEI 216
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A6H5K7L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7L6_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.740e-22
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 1 
Query: 1072 MITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFIVNRGISGVLSTLEV 1242
            MI RVLEAFRRPISVTLRTRLRGEVYSR+GQLERVFYSLNEFIVNRGISGVLSTLEV
Sbjct:    1 MIKRVLEAFRRPISVTLRTRLRGEVYSREGQLERVFYSLNEFIVNRGISGVLSTLEV 57
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: UPI000D62369F (NAD kinase isoform X9 n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000D62369F)

HSP 1 Score: 108 bits (269), Expect = 2.280e-22
Identity = 82/217 (37.79%), Postives = 114/217 (52.53%), Query Frame = 1 
Query:  619 LTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWL-QEQELEVLVDPS--EDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERV------FYSLNEFIVNRGISGVLSTLEV 1242
            L   + H ++G       ++   S RL W  PP  V VIKK +D  V     +LV WL +E+ + V V+ S  ED+ L +D R  G     +  R     L  + DFI+CLGGDGT+L A+  F  S  +PP +AF LGSLGFL PF     Q  +T VLE      ++TLR+RLR  +  RKG+  +          LNE +V+RG S  LS +++
Sbjct:   30 LPSNQVHVMVGTV---RTIQDPASQRLTWYKPPLSVLVIKKIRDSSVLPPFVQLVTWLIEEKRMVVFVEASVLEDSALARDPRFQGVRDRLQTFRDGTDDLQDRIDFIVCLGGDGTLLYASLLFQQS--VPPVMAFHLGSLGFLTPFEFDNFQEQVTNVLEGH---AALTLRSRLRC-IIMRKGEEGQPTKPPTNLLVLNEVVVDRGPSPYLSNIDL 237
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A0C9Q5W4_9HYME (NAD(+) kinase (Fragment) n=2 Tax=Apocrita TaxID=7400 RepID=A0A0C9Q5W4_9HYME)

HSP 1 Score: 105 bits (263), Expect = 3.130e-22
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 1 
Query:  673 VRSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWL-QEQELEVLVDPS--EDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERV------FYSLNEFIVNRGISGVLSTLEV 1242
            ++   S RL W  PP  V VIKK +D  V     +LV WL +E+ + V V+ S  ED  L +D R  G     +  R     L  + DFI+CLGGDGT+L A+  F  S  +PP +AF LGSLGFL PF     Q  +T VLE      ++TLR+RLR  +  RKG+  +          LNE +V+RG S  LS +++
Sbjct:    8 IQDPASQRLTWYKPPLTVLVIKKVRDSSVLPPFVQLVTWLIEEKRMVVFVEASVLEDPALARDPRFQGVRDRLQTFRDGTDDLQDRIDFIVCLGGDGTLLYASLLFQQS--VPPVMAFHLGSLGFLTPFEFDNFQEQVTNVLEGH---AALTLRSRLRC-IIMRKGEDGQPTKPPTNLLVLNEVVVDRGPSPYLSNIDL 200
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: UPI00083D289D (NAD kinase-like isoform X2 n=3 Tax=Apoidea TaxID=34735 RepID=UPI00083D289D)

HSP 1 Score: 107 bits (266), Expect = 4.150e-22
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 1 
Query:  673 VRSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWL-QEQELEVLVDPS--EDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERV------FYSLNEFIVNRGISGVLSTLEV 1242
            ++   S RL W  PP  V VIKK +D  V     +LV WL +E+ + V V+ S  ED  L +D R  G     +  R     L  + DFI+CLGGDGT+L A+  F  S  +PP +AF LGSLGFL PF     Q  +T VLE      ++TLR+RLR  +  RKG+  +          LNE +V+RG S  LS +++
Sbjct:   91 IQDPASQRLTWYKPPLTVLVIKKVRDSSVLPPFVQLVTWLIEEKRMVVFVEASVLEDPGLARDPRFQGVRDRLQTFRDGTDDLQDRIDFIVCLGGDGTLLYASLLFQQS--VPPVMAFHLGSLGFLTPFEFDNFQEQVTNVLEGH---AALTLRSRLRC-IIMRKGEENKESKPPTNLLVLNEVVVDRGPSPYLSNIDL 283
[Close]
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Match: A0A6P3XHH4_DINQU (NAD(+) kinase n=3 Tax=Ponerini TaxID=141711 RepID=A0A6P3XHH4_DINQU)

HSP 1 Score: 107 bits (268), Expect = 4.190e-22
Identity = 91/244 (37.30%), Postives = 126/244 (51.64%), Query Frame = 1 
Query:  556 RASGTIDFQEYVMGFAGMARVLTDKKAHSLIG-----LSTGSNIV--RSGRSARLFWDGPPRRVAVIKKWKDPEVAAKTEKLVRWL-QEQELEVLVDPS--EDNELGKDGRVLGPVFMPEVARFDPGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPFNPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSR--KGQLERV---FYSLNEFIVNRGISGVLSTLEV 1242
            R+  T+D    V G     R L     + L G     +   +++V  +   S RL W  PP  V VIKK +D  V     ++V WL QE+++ V V+ S  ED  L +D R  G     +  R D   L  + DFIICLGGDGT+L A+  F  S  +PP +AF LGSLGFL PF     +  +T VLE      ++TLR+RLR  +  R  +GQ E+       LNE +V+RG S  LS +++
Sbjct:   27 RSESTVDHVGTV-GMRRRTRSLNAPNPYQLFGRCGRIMKNSASVVAIQDPASQRLTWYKPPLTVLVIKKVRDSAVLPPFVEMVTWLIQEKQMVVFVEASVLEDPALARDPRFQGVRDKLQTFR-DGDDLQDRIDFIICLGGDGTLLYASLLFQQS--VPPVMAFHLGSLGFLTPFEFDNFREQVTNVLEGH---AALTLRSRLRCIIVRRNEEGQPEKAPTKLLVLNEVVVDRGPSPYLSNIDL 263
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10649.879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ1_ECTSI1.060e-19891.19EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z9J6_9STRA3.890e-12466.12ATP-NAD kinase-like domain-containing protein n=1 ... [more]
A0A6H5K900_9PHAE1.490e-5675.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A150GNZ3_GONPE2.890e-2539.69Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A836BQ70_9CHLO1.790e-2440.31Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A6H5K7L6_9PHAE1.740e-2296.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000D62369F2.280e-2237.79NAD kinase isoform X9 n=1 Tax=Cephus cinctus TaxID... [more]
A0A0C9Q5W4_9HYME3.130e-2239.70NAD(+) kinase (Fragment) n=2 Tax=Apocrita TaxID=74... [more]
UPI00083D289D4.150e-2239.70NAD kinase-like isoform X2 n=3 Tax=Apoidea TaxID=3... [more]
A0A6P3XHH4_DINQU4.190e-2237.30NAD(+) kinase n=3 Tax=Ponerini TaxID=141711 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10649contigS-firma_F_contig10649:111..4810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FLZ1
PFAMsNAD_kinase
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00858
KEGG ReactionR00104
KEGG Pathwayko00760,ko01100,map00760,map01100
Evalue1.74e-199
EggNOG OGsCOG0061@1|root,KOG2178@2759|Eukaryota
EC2.7.1.23
DescriptionNADP biosynthetic process
COG categoryG
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionATP-NAD kinase, PpnK-type, all-beta
Ec32 orthologEc-22_000250.1
Exons9
Model size1242
Cds size1242
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815603.7404768-CDS-S-firma_F_contig10649:110..2701622815603.7404768-CDS-S-firma_F_contig10649:110..270Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 111..270 -
1696949447.4742272-CDS-S-firma_F_contig10649:110..2701696949447.4742272-CDS-S-firma_F_contig10649:110..270Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 111..270 -
1622815603.7512212-CDS-S-firma_F_contig10649:867..9971622815603.7512212-CDS-S-firma_F_contig10649:867..997Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 868..997 -
1696949447.4895175-CDS-S-firma_F_contig10649:867..9971696949447.4895175-CDS-S-firma_F_contig10649:867..997Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 868..997 -
1622815603.7614715-CDS-S-firma_F_contig10649:1399..15791622815603.7614715-CDS-S-firma_F_contig10649:1399..1579Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 1400..1579 -
1696949447.5007665-CDS-S-firma_F_contig10649:1399..15791696949447.5007665-CDS-S-firma_F_contig10649:1399..1579Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 1400..1579 -
1622815603.774227-CDS-S-firma_F_contig10649:2464..25591622815603.774227-CDS-S-firma_F_contig10649:2464..2559Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 2465..2559 -
1696949447.509292-CDS-S-firma_F_contig10649:2464..25591696949447.509292-CDS-S-firma_F_contig10649:2464..2559Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 2465..2559 -
1622815603.7839031-CDS-S-firma_F_contig10649:3067..31811622815603.7839031-CDS-S-firma_F_contig10649:3067..3181Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3068..3181 -
1696949447.517181-CDS-S-firma_F_contig10649:3067..31811696949447.517181-CDS-S-firma_F_contig10649:3067..3181Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3068..3181 -
1622815603.796031-CDS-S-firma_F_contig10649:3518..35291622815603.796031-CDS-S-firma_F_contig10649:3518..3529Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3519..3529 -
1696949447.5254111-CDS-S-firma_F_contig10649:3518..35291696949447.5254111-CDS-S-firma_F_contig10649:3518..3529Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3519..3529 -
1622815603.8071492-CDS-S-firma_F_contig10649:3695..38291622815603.8071492-CDS-S-firma_F_contig10649:3695..3829Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3696..3829 -
1696949447.5342371-CDS-S-firma_F_contig10649:3695..38291696949447.5342371-CDS-S-firma_F_contig10649:3695..3829Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 3696..3829 -
1622815603.817667-CDS-S-firma_F_contig10649:4344..45711622815603.817667-CDS-S-firma_F_contig10649:4344..4571Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 4345..4571 -
1696949447.5443215-CDS-S-firma_F_contig10649:4344..45711696949447.5443215-CDS-S-firma_F_contig10649:4344..4571Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 4345..4571 -
1622815603.8272974-CDS-S-firma_F_contig10649:4619..48101622815603.8272974-CDS-S-firma_F_contig10649:4619..4810Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 4620..4810 -
1696949447.5523226-CDS-S-firma_F_contig10649:4619..48101696949447.5523226-CDS-S-firma_F_contig10649:4619..4810Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10649 4620..4810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10649.879.1prot_S-firma_F_contig10649.879.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10649 111..4810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10649.879.1

>prot_S-firma_F_contig10649.879.1 ID=prot_S-firma_F_contig10649.879.1|Name=mRNA_S-firma_F_contig10649.879.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=414bp
NYHPPGYDSKGKQNPPDDGSPPSTALPTAKPPSSSDTPGIRRQAGDEGGA
AVAPGVAGGDAATPRRRRGEGGGPQDGDVDFEAGGGESPVVYGALGQVEE
QPVYDLPKEWKTMVSTLCLRTNFEPAELADLFQRFRQLAAGTKEYLTAGE
FRRTVRRNFGIMNEEWVKKYFKAFDRNHRQGWLGHRASGTIDFQEYVMGF
AGMARVLTDKKAHSLIGLSTGSNIVRSGRSARLFWDGPPRRVAVIKKWKD
PEVAAKTEKLVRWLQEQELEVLVDPSEDNELGKDGRVLGPVFMPEVARFD
PGQLATQADFIICLGGDGTVLKAAQYFDDSTPIPPTLAFGLGSLGFLAPF
NPSQCQSMITRVLEAFRRPISVTLRTRLRGEVYSRKGQLERVFYSLNEFI
VNRGISGVLSTLEV
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mRNA from alignment at S-firma_F_contig10649:111..4810-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10649.879.1 ID=mRNA_S-firma_F_contig10649.879.1|Name=mRNA_S-firma_F_contig10649.879.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4700bp|location=Sequence derived from alignment at S-firma_F_contig10649:111..4810- (Sphaerotrichia firma ET2_F female)
AACTACCACCCGCCAGGTTACGACAGCAAGGGAAAGCAGAACCCGCCGGA
TGACGGATCACCGCCATCGACCGCCCTGCCAACCGCGAAACCGCCGTCGT
CGAGCGACACACCGGGGATACGCAGACAGGCAGGGGATGAGGGGGGCGCG
GCAGTCGCTCCGGGAGTCGCGGGCGGGGATGCGGCAACACCGTCCCCGGG
GGGAGAAACCGATCCCGATCGGGAGAGCGGGAGGGGGAGGAGAAGAAGGA
GGGGCGAGGGCGGGGGGCCGCAGGATGGGGACGTCGATTTTGAGGCTGGG
GGGGGGGAGTCGCCCGTGGTGTACGGGGCGCTCGGGCAGGTGGAGGAGCA
GCCCGTGTACGACCTTCCCAAGGAGTGGAAGACGATGGTGTCGACGCTTT
GTCTCCGGACGAACTTCGAGCCGGCGGAGCTGGCGGACCTGTTCCAGCGG
TTCAGGCAGCTGGCCGGTGAGGTAGATTTGTACTCCCACTTTCTTGTTTT
TGTGGTAAGACGTGTGGGGTCTGGTAGTCTGCTGTGTTCCGCTACATGCG
CGCGAAAAAGATTGACGACGAGGAGAATGGTTTCTTGGAGAGAAGGCGGG
CTTGTGCGGCAGTCTTGGCGGCGCTTTTCGTCTTGTGGTGCACATGACGT
GCGCACGTTGCAGGGCAGAAGCTGACCCTTTTTTCCGAGAAGCGGCAGGG
TTTTGTGCTTGTTCTAGGAGATGTTTTGCTGCGTACTGTACGCGCGCCAC
ACGAAGATGCGACGGGAAAAGGGGGGGCGAGTGCAGCACCGTGCGCGACG
ATCGAAGCCACTCAAAGCTTCCGTGACTTGGCAGGACGTGAAAAAGACTT
CTATGTCTTGCCGTTAACACAACCAAAGCGGGGGAAAACATCTTTTCAAG
GAAACAGCGGAGCCCACGACAGGCTGAAACACCGCAACAACAAACCAACC
AACTCTTACCTTGCCTGGGATCGATGTGGAGCAGGGACGAAGGAGTACCT
CACGGCGGGAGAATTCCGCCGCACGGTGCGGAGGAACTTCGGCATCATGA
ACGAGGAGTGGGTGAAGAAGTACTTCAAAGCCTTCGACCGGAATCACAGG
CAAGGCTGGCTTGGTGTCGGAAACGCCGTTCGTTTGGCAAACCCCCAAGA
GCGGCATTTGGGGGGAGTTGGGGCCGTCCACTGCTCTGTAGTTCCAGGTG
GATTTTGTTCCGGCTTCCTTTCTGTTTTTACGTTGTCCGGGTCGGAAGGG
GCAAAAAGCTTTGGCGGGGTCGGCGTCGAAGCATCGAGCATCGTCTAGTA
GTATCGTTTCAACTGCTGTTTCTCGACGCTTTCGTTGCGGGTATTGTATC
GCGAGTGGAGTCGTAGGGGTTGTCGTGTTCTCTCGAAACGTTGTGGAAAG
TCGCGCTCACCCGGCTCTTCCGGTACTGAAGCTAGATTGGCACCGTCTTT
GCGGCTCAATCCATGTGCCAAACCTCCCGCGTTTCTTGCACTTCCCTCAA
CCCTGAGCGGTGCGGTTAGTATCCGCCACCACGGCCCAGAATGGTTTTGG
TCTCTGTTCACCGCCCTCGATGTCGTGTTCACCCCCCCCCCCCCCCTCCC
GCCCTCGATTCCGCATTTTGTGGAAACAGTGGCACCATCGATTTCCAGGA
GTACGTGATGGGGTTCGCGGGAATGGCGAGGGTCCTCACGGACAAGAAGG
CCCACTCCTTGATAGGCCTGTCCACGGGCTCCAACATCGTAAGGTGAGGG
TGGGGTATCGTCACGCACACGGATGTATGTATGTGCGCATGTATGTATGT
ATGTATGTATGTATGTATGTGTGTTTTATGTATGTATCTCGAGGAGGAAC
GACAGGCAATCAGATCCTTGATAGGGGTATGTAGGTGTTGGACCTGTCCT
TTCCATGAACTCCAAGTCGGAATGGCGAGGGTAGGGTAACATGCGCACAT
ATTTTTTTTGGCATAGACTAGGAACGGCAGGAATCATTTTTCTGGCTGTG
TGCTTCCGTGGTAGGCCGTTCTATGGCATCCGACATTGCAAGGTGGAGCA
TGCTGTTAGTGTACATGAGCGTGTGCGTGCCGATCAACCCACAGGCCGTC
ACTCAATTCTTTAATCGAGCGAGCAGTAGTACTCTCTACCTCCACTCTAG
AGTACTCTACGGCGAGTTCAACTAAATTAACGTTCAAATATCTTTGTCTA
CGTGTAGCTAATTTACCTTTGATCTGCAACTCTGTCGTTACCCGTGTGCA
GATCCGGGAGAAGCGCACGTCTGTTCTGGGACGGGCCTCCACGGAGAGTG
GCGGTGATCAAGAAGTGGAAAGACCCAGAAGTGGCGGCGAAAACAGGTAC
GCAACTTACCTATGCAGGAAGCTTAGGCCTCGGCGATTTTCTCGAGTGAA
TGGGTGACCGACAACGACAGAGAGAGGGAGAGGCAGAGACAGAGAGAGGC
ATCGAAAAGATTAGGTCGGTGTCTCTGCAGGACACAAGGCATGGGAGTTT
CGTGCGTTCCCCGCTGAAACGGCATTTGCTTGCGTACGAGCATGCCTACG
GAGTGCGGCTCACCGCCGGTGGCACGGTGCTGGCGCACGCGACGCTTAGG
GTTGTGGCATTGTGGACGCTTTTTTGTACGGGTTAGGCGAAGGCACTACT
GAAGAGAACGAAGAGGGCGGGAAAAGATAAACATCGACGGGAGATAGGAG
ATGGTCGCAGGGCAGGGGACGACACCATCTGTGTCGCCTACCCCACCGCA
CCACCTGCGTACCTCTCAATGGCGTTTGTTGTATGTTGTACAGCGAAAGC
GCTCCCTTGGTGGAGGATGGGTGCTTCCGTCTCAATTGAACTGATTGAGG
GTGAACGATCGGCAACAATCAACCACGCGGTGAAGAAAAGGACGCCAGTA
TACGGCTGTGTGCCCCTTCTCTTGTCGACTGGCCGATACGGACGGTCACT
TGCCGAACAAATCGACAGCGAGGAAAGGAACGAGCTGGAGCGCTCATAGA
TACCGAGCAAAGCGGGCGCCCGCTACAATAGCCCCAGCCTGTTGGCAACC
TCAAACTCGATGTCCGGAAGAACAGACAGTCCACGCTGTCCGCGATCTCA
GTCTCACGACCAGAAAGAGCCGTCTTCGCAAACCCTCAGCGTAAGGCGAG
ACGTCGAGCTGTCCGCGACACATACGCTCCATCCCTACCCCCTCCCCAAC
CGATTGACGGGATACCGTTGTCCCATCCCAGAGAAACTGGTGAGGTGGCT
GCAGGAGCAGGAGCTCGAAGTCCTGGTGGATCCGAGCGAGGACAACGAGC
TAGGGAAGGACGGTCGTGTGCTGGGCCCGGTGTTCATGCCGGAGGTGGCG
AGGTTCGACCCCGGTCAGCTCGCCACGCAGGCCGACTTTATCATCTGCTT
GGGCGGAGACGGTGAGCTATGGTGATTAGCGGTGCGCTGCTTAGTGTCAC
GTTTTTTTTCGTGGGAGGGTCGTGGCGCTTTTTGCCCGTGTTGGAGGTTT
CATTTTTTTTGCTGACAGAGTTGGACAGGAGTGCTAGTTTCGGGCAGCGT
GTTTCCTGTACATATCTGTTTTTTAAGTGTTCTTCGTCGTCATTCCCGCC
GCGGGCATATCGCAACCCCGTGTTTTTTCTGTCCCGTTTCTCTGCTGGGG
CCTCTTTCTGTGTAACCCTTTCGAGCATACATCCCGTGAAATGGTCGTTC
CTGGCTGTTGTACCCCGCTACACTACAAAAGTGGTTCAATACTTTCTGCA
TTGTTTGTTGCTTGGGTTCTCATCTTGCGGCACTTCGCCTGTCACCCCCG
GCCGCGCCTCCAGGAACGGTTCTGAAAGCGGCGCAGTACTTCGACGACTC
CACCCCTATCCCGCCCACCCTGGCCTTCGGGCTGGGCTCCCTGGGCTTCC
TCGCCCCGTTCAATCCCTCACAGTGCCAGTCCATGATCACGAGGTGGGTC
ACTCTGTCTGCCGCTGCCGGTGCCGCCGCAGCTGCAGCTCCTGTGCCTGT
CTGGGTGTTTTTGTTTTGCCCGCTGTCTTGATGTTGATACTGTAGCTGTC
TGGGTATTTCGACCTCTGCCATATGGGCGACTGCGGCGTATCCGTTGCTG
ATGCGTGAAATGCAAGCTAGAGGCTGGCTTTCGCGCGGGGTGTTGTTGTG
GCCTGTTGCGGAGATGCACCATCTGCGCAAAACGGTTGCGATTTGTTGTT
TCCTACCTGTTAGCCGTCTCGATTCTGTGCATACGAACGTGGACCTTTAT
GTTTTACCGCCTTTTCGACGGGGCACCGTCGTCTTTCTGCACCCCACACC
CATGCCATTTTTATGCAAGGCTTTGCGAGGCCTGCCTTTCTAGGTTATCC
CTTTTTTTTGTCTTTTTCTGTTTCAAGGGTGTGGGAGAGTAGCTCGAATT
GGTGTACTCATTCTCAAGTTGACTCCTCTCTCGTTTGGCGGAAAAGTCGT
TTCTTCTATTGATATCCACGAGGGTCCCATAGAGTCTTGACACTCGTTTC
CACGCATCTGCCCGCGTGGCTCCGTGTATGACGTCCCCAGGGTGTTGGAG
GCCTTCCGGAGGCCCATCTCCGTGACGCTGCGGACGCGGCTGCGGGGCGA
GGTGTACAGCCGAAAAGGACAGCTTGAGCGGGTGTTCTACTCCCTCAACG
AGTTCATCGTCAACAGGGGCATCTCGGGGGTGCTGAGCACACTGGAGGTG
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Coding sequence (CDS) from alignment at S-firma_F_contig10649:111..4810-

>mRNA_S-firma_F_contig10649.879.1 ID=mRNA_S-firma_F_contig10649.879.1|Name=mRNA_S-firma_F_contig10649.879.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2484bp|location=Sequence derived from alignment at S-firma_F_contig10649:111..4810- (Sphaerotrichia firma ET2_F female)
AACTACCACCCGCCAGGTTACGACAGCAAGGGAAAGCAGAACCCGCCGGA
TGACGGATCACCGCCATCGACCGCCCTGCCAACCGCGAAACCGCCGTCGT
CGAGCGACACACCGGGGATACGCAGACAGGCAGGGGATGAGGGGGGCGCG
GCAGTCGCTCCGGGAGTCGCGGGCGGGGATGCGGCAACACCAACTACCAC
CCGCCAGGTTACGACAGCAAGGGAAAGCAGAACCCGCCGGATGACGGATC
ACCGCCATCGACCGCCCTGCCAACCGCGAAACCGCCGTCGTCGAGCGACA
CACCGGGGATACGCAGACAGGCAGGGGATGAGGGGGGCGCGGCAGTCGCT
CCGGGAGTCGCGGGCGGGGATGCGGCAACACCGAGAAGAAGGAGGGGCGA
GGGCGGGGGGCCGCAGGATGGGGACGTCGATTTTGAGGCTGGGGGGGGGG
AGTCGCCCGTGGTGTACGGGGCGCTCGGGCAGGTGGAGGAGCAGCCCGTG
TACGACCTTCCCAAGGAGTGGAAGACGATGGTGTCGACGCTTTGTCTCCG
GACGAACTTCGAGCCGGCGGAGCTGGCGGACCTGTTCCAGCGGTTCAGGC
AGCTGGCCGGAGAAGAAGGAGGGGCGAGGGCGGGGGGCCGCAGGATGGGG
ACGTCGATTTTGAGGCTGGGGGGGGGGAGTCGCCCGTGGTGTACGGGGCG
CTCGGGCAGGTGGAGGAGCAGCCCGTGTACGACCTTCCCAAGGAGTGGAA
GACGATGGTGTCGACGCTTTGTCTCCGGACGAACTTCGAGCCGGCGGAGC
TGGCGGACCTGTTCCAGCGGTTCAGGCAGCTGGCCGCAGGGACGAAGGAG
TACCTCACGGCGGGAGAATTCCGCCGCACGGTGCGGAGGAACTTCGGCAT
CATGAACGAGGAGTGGGTGAAGAAGTACTTCAAAGCCTTCGACCGGAATC
ACAGGCAAGGCTGGCTTGGTCAGGGACGAAGGAGTACCTCACGGCGGGAG
AATTCCGCCGCACGGTGCGGAGGAACTTCGGCATCATGAACGAGGAGTGG
GTGAAGAAGTACTTCAAAGCCTTCGACCGGAATCACAGGCAAGGCTGGCT
TGGTCATCGAGCATCCATCGAGCATCTGGCACCATCGATTTCCAGGAGTA
CGTGATGGGGTTCGCGGGAATGGCGAGGGTCCTCACGGACAAGAAGGCCC
ACTCCTTGATAGGCCTGTCCACGGGCTCCAACATCGTAAGTGGCACCATC
GATTTCCAGGAGTACGTGATGGGGTTCGCGGGAATGGCGAGGGTCCTCAC
GGACAAGAAGGCCCACTCCTTGATAGGCCTGTCCACGGGCTCCAACATCG
TAAGATCCGGGAGAAGCGCACGTCTGTTCTGGGACGGGCCTCCACGGAGA
GTGGCGGTGATCAAGAAGTGGAAAGACCCAGAAGTGGCGGCGAAAACAGA
TCCGGGAGAAGCGCACGTCTGTTCTGGGACGGGCCTCCACGGAGAGTGGC
GGTGATCAAGAAGTGGAAAGACCCAGAAGTGGCGGCGAAAACAGAGAAAC
TGGTGAGGTGGCTGCAGGAGCAGGAGCTCGAAGTCCTGGTGGATCCGAGC
GAGGACAACGAGCTAGGGAAGGACGGTCGTGTGCTGGGCCCGGTGTTCAT
GCCGGAGGTGGCGAGGTTCGACCCCGGTCAGCTCGCCACGCAGGCCGACT
TTATCATCTGCTTGGGCGGAGACGAGAAACTGGTGAGGTGGCTGCAGGAG
CAGGAGCTCGAAGTCCTGGTGGATCCGAGCGAGGACAACGAGCTAGGGAA
GGACGGTCGTGTGCTGGGCCCGGTGTTCATGCCGGAGGTGGCGAGGTTCG
ACCCCGGTCAGCTCGCCACGCAGGCCGACTTTATCATCTGCTTGGGCGGA
GACGGAACGGTTCTGAAAGCGGCGCAGTACTTCGACGACTCCACCCCTAT
CCCGCCCACCCTGGCCTTCGGGCTGGGCTCCCTGGGCTTCCTCGCCCCGT
TCAATCCCTCACAGTGCCAGTCCATGATCACGAGGAACGGTTCTGAAAGC
GGCGCAGTACTTCGACGACTCCACCCCTATCCCGCCCACCCTGGCCTTCG
GGCTGGGCTCCCTGGGCTTCCTCGCCCCGTTCAATCCCTCACAGTGCCAG
TCCATGATCACGAGGGTGTTGGAGGCCTTCCGGAGGCCCATCTCCGTGAC
GCTGCGGACGCGGCTGCGGGGCGAGGTGTACAGCCGAAAAGGACAGCTTG
AGCGGGTGTTCTACTCCCTCAACGAGTTCATCGTCAACAGGGGCATCTCG
GGGGTGCTGAGCACACTGGAGGTGGGTGTTGGAGGCCTTCCGGAGGCCCA
TCTCCGTGACGCTGCGGACGCGGCTGCGGGGCGAGGTGTACAGCCGAAAA
GGACAGCTTGAGCGGGTGTTCTACTCCCTCAACGAGTTCATCGTCAACAG
GGGCATCTCGGGGGTGCTGAGCACACTGGAGGTG
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