mRNA_S-firma_F_contig10629.858.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A7S1G5B6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5B6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.590e-21 Identity = 74/205 (36.10%), Postives = 96/205 (46.83%), Query Frame = 1
Query: 4 SVLERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSG----ELVVVDAVPVYHHTPSPPMVAACLDMLYCLPPHQVNVW--AETRSLDVVGLYHANQ-APTDKVPPVYLARIAASVG---DGIKLVMLSGELLDTAPLSCWTLMRQRGEGWEEDGSGLP---------PDAATCGLPALLTAMKSASTSLVDFDDHLDDVTKDWRNP 561
+V+ AAWLK+ LHA H V G L+G P+G +VV DAVP++HH + PM+ A M W A+ L VVG YHAN+ A T + PV R+A V G +V+L +++ + P L G +E GS P P AT A A +VDFDDH DDV DWRNP
Sbjct: 3 AVISTAAWLKVFLHAAKHEASEVNGLLMGVSMPTGGGRPRVVVEDAVPLFHHPTTAPMLEAATLM--------AEEWGAAQAPKLAVVGYYHANKRAKTHVLSPV-AQRVADKVEANCPGAAIVLLDPDMIVSEPERALRLCAASTSGSDE-GSWAPSDRSLKPRDPTTATAKTLAEHLAEGGPVDRVVDFDDHFDDVGADWRNP 197
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: D8LMA2_ECTSI (COX4 neighbour n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA2_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 2.100e-18 Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTPSPPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASV-----GDGIKLVMLSGELLDTAPLSCWTLM-RQRGEGWEEDGSGLPPDAATCGLPALLTAMKSASTS-LVDFDDHLDDVTKDWRNPWCGS 573
+E AA+LK+MLHA + AV GFLLG + +G++ V DAVP++H + P++ M V+ A L +VG Y ANQ D P + + G + LV++S + L+TA S + R + + + + A + A +A+ + LVD D+HLDDV KDWRNP S
Sbjct: 8 VEEAAYLKLMLHAAKYPWAAVNGFLLGEEGLTGQVSVKDAVPLFHTSTLAPLLETSAVM--------VDAHAARSGLCIVGFYQANQCLDDNAPGALATEVMNKIDSTHAGPSV-LVVISNKRLETAGDSAVSAYGRDSNNSFRKH---VEVEVAAEAVKAFESALADKTEGRLVDMDEHLDDVQKDWRNPGIAS 190
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A0R3SR86_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3SR86_HYMDI) HSP 1 Score: 88.2 bits (217), Expect = 2.240e-18 Identity = 58/188 (30.85%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTPSPPMVAACLDMLYCLPP--HQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASVGDGI---KLVMLSGELLDTAPLSCWTLMRQRGEGWEEDGSGLPPDAATCGLPALLTAMKSASTSLVDFDDHLDDVTKDWRN 558
LE A+ KI+LHA + +A+ G LLG G+ ++ D VP++H CL ++ L Q+ + T +L + G Y AN+ RI + D I ++ML+ + L + C+TL ++G+ W++ +A L LL+ ++ VDFD+HLDDV+KDWRN
Sbjct: 6 LESIAYAKILLHASKYPHLAINGVLLGEYD-QGKFIIQDCVPLFH---------GCLTLVPMLEVALSQIESYCGTVNLKICGYYQANELANCNDINQIATRIGDKIADNIGFGNVIMLNNDRLTSLSSECFTLYCKKGDSWQKGPKITIESSAADLLKPLLS--EAGLEEFVDFDNHLDDVSKDWRN 181
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A5D6Y068_9STRA (MPN domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y068_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.830e-17 Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTP--SPPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLA-----RIAASVGDGIKLVMLSGELLDTAPLSCWTLMRQRGEGWEEDGSGLPPD--AATCGLPALLTAMK-SASTSLVDFDDHLDDVTKDWRNP 561
+E AA++K+MLHA H A G LLG + G VV DAVP++HH +P + AAC V+ +A+ + VVG Y+A+ A + A ++ A+ L++ S +L A L++ GW + L + A A++ +A LVDFD+HL+DV KDWRNP
Sbjct: 7 VEPAAYVKLMLHAAKHPAGACCGLLLGEEQGQG-FVVADAVPLFHHAAPLAPLLEAACA---------VVDAYAQAQRQRVVGFYYASDAGDGAASLAHFAERAADKVEANCSRACVLLVDSQQLQSAAKSGVQLLLKDVKRGWVRVDNRLRVEDSGARSAAQVFTRALEQNAFAELVDFDEHLEDVAKDWRNP 190
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A7N0VL55_KALFE (MPN domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VL55_KALFE) HSP 1 Score: 83.2 bits (204), Expect = 2.290e-16 Identity = 64/204 (31.37%), Postives = 100/204 (49.02%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTPSPPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASVGDGI-------KLVMLSGELL-------DTAPLSCWTLMRQRGEGW---EEDGSG---LPPDAATCGLPALLTAMKSASTSLVDFDDHLDDVTKDWRNP 561
L ++A++K++LHA H T AV G L+G + S + + DAVP++H S ++ + L + + V + L VVG +HAN+ D V L +A ++GD I +++L + L D +P+ R W E +G+G L AA L ++ K +VDFDDHLDD++KDW NP
Sbjct: 10 LGQSAYIKLVLHALRHQTSAVNGVLIGRLNDSNVIEIADAVPLFHTVTSISLLPSLEISLLLIEDYYVK-----KGLSVVGYFHANERAED----VELTGVAKNIGDQIYKYFPQAMILLLDSKKLEFLTKGKDRSPIM-QLYTRDSSRNWKLSETEGTGRLTLKEPAANAVLLDYISTKKWEQ--IVDFDDHLDDISKDWLNP 201
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A0L9UV33_PHAAN (MPN domain-containing protein n=4 Tax=Phaseoleae TaxID=163735 RepID=A0A0L9UV33_PHAAN) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-16 Identity = 58/198 (29.29%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 22 AWLKIMLHAHTHSTVAVGGFLLGTQSPSGELV-VVDAVPVYH-HTPSPPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASVGDGI-------KLVMLSGELLDTAPLS------CWTLMRQRGEGWE---EDGSGLPPDAATCGLPALLTAMKSASTSLVDFDDHLDDVTKDWRNP 561
A++K++LH+ H T AV G L+G SPS ++V + DAVP++H H P P + L + + + + L++VG +HAN+ D L +A ++GD I +++L + LD S +R + W+ D + + + L +VDFDDHLDD++KDW NP
Sbjct: 14 AYIKLVLHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLIL--------IEEYFSAKGLNIVGYFHANERSDDSE----LGSVAKNIGDHICRYFPQAAVLLLDNKKLDALKKSKERSAIMQLYVRDTSKNWKLVPSDANRFSLKEPSANVVLLDYIATEKWNGIVDFDDHLDDISKDWLNP 199
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: K3X3W2_GLOUD (MPN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W2_GLOUD) HSP 1 Score: 81.6 bits (200), Expect = 8.270e-16 Identity = 58/196 (29.59%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHH-TPSPPMVAACLDMLYCLPPHQVNVWAETR-SLDVVGLYHANQAPTDKVPPVYLA------RIAASVGDGIKLVMLSGELLDTAPLSCWTLMRQRGEGWEEDGSGL----PPDAATCGLPALLTAMKSASTSLVDFDDHLDDVTKDWRNP 561
+E +A++K++LHA + T A G L+G + G VV DAVP++HH P P++ M V+ W +T+ S +VG YHA + ++ + + ++ A+ L++ + +L A + L++ GW + L D T ++A L DFD+HLDDV+KDWRNP
Sbjct: 6 VEASAYVKLLLHAAKYPTSACNGLLVGEEQGQG-FVVTDAVPLFHHDAPLAPVLEVACAM--------VDAWCQTQPSKKIVGYYHAGEFGSESAAALNVFGEKVADKVEANCSRACVLLVENNQLNSEAKSAVQLLLKDVKRGWIRVDNRLRLRNTSDDKTPMQVFSAALQQNAFEELADFDEHLDDVSKDWRNP 192
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A6I9UI30_SESIN (ER membrane protein complex subunit 8/9 homolog n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UI30_SESIN) HSP 1 Score: 81.6 bits (200), Expect = 8.270e-16 Identity = 63/202 (31.19%), Postives = 94/202 (46.53%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELV-VVDAVPVYHHTPS--PPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASVGDGIK-------LVMLSGELLDTAPLS-----CWTLMRQRGEGWE---EDGSGLPPDAATCGLPALLTAMKSAS-TSLVDFDDHLDDVTKDWRN 558
+ + A++K++LHA H T AV G LLG SP V +VD+VP++H PP+ A + + + + L +VG +HAN+ D LA +A ++GD I L++L + L+ P L + G W+ GS T LL + S S+ DFDDHLDD++KDW N
Sbjct: 9 IHQTAYIKLVLHALKHRTAAVNGLLLGRASPDAAAVEIVDSVPLFHSQIGLLPPLEVALI---------MIEEYYGEKGLSIVGYFHANERYDD----FELATVAKNIGDHITRYFPQAALLLLDNKKLEDLPKGKERSPVMQLYIKDGSSWKLGGSKGSNQLTVKETSANTVLLDYISSEKWKSITDFDDHLDDISKDWVN 197
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A835YUA8_9STRA (COX4 neighbour n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.540e-15 Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 1
Query: 10 LERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTPSPPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKV-PPVYLARIAASV----GDGIKLVMLSGELLDTAPLSCWTLMRQRGEGWEEDGSGLPPDAATCGLPALLTAMKSASTSLV-DFDDHLDDVTKDWRN 558
+E A+ K+MLH+ H + V G LLG+Q S VV DAVP++H PM+ + V+ + L +VG Y+A P D PP +L R+A + GD L+ + + LD A + G L D+A+ + A + + S V D DDHLDDVTKDWRN
Sbjct: 6 VEPKAYCKLMLHSAQHPSCDVLGVLLGSQDDS-RTVVKDAVPLFHLPVLTPMLEVASSL--------VDAYVRESDLKMVGTYYATATPEDMPGPPTHLPRVATKLCEKLGDRAVLLQQNHKKLDAAQEHALLAFERDSGGNYRRALELSVDSAS--VTAFNGLLLANSVPFVRDMDDHLDDVTKDWRN 183
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Match: A0A2R6PR68_ACTCC (ER membrane protein complex subunit 8/9 like n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PR68_ACTCC) HSP 1 Score: 80.1 bits (196), Expect = 3.170e-15 Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 1
Query: 22 AWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTPS--PPMVAACLDMLYCLPPHQVNVWAETRSLDVVGLYHANQAPTDKVPPVYLARIAASVGDGIK-------LVMLSGELLDTAP--------LSCWTLMRQRGEGWEEDGSGLPPDAATCGLPALLTAMKSASTS----LVDFDDHLDDVTKDWRNP 561
A++K++LHA H T AV G LLG S + + DAVP++H PP+ A L Q+ + + L +VG +HAN+ D L+ +A ++GD + L++L + L+ P + +T + + W+ GS +T A + + ST +VDFDDHLDD++KDW NP
Sbjct: 13 AYIKLVLHALKHKTAAVNGVLLGRLSGGDAVEIADAVPLFHSHLGLLPPLEIALL---------QIEEYYGAQGLYIVGYFHANERFND----FELSNVARNIGDHVHRYFPQAALLLLDNKKLEALPKGKDRSPVMQLYT--KDSSKSWKLVGSDGGSRFSTKEPSANVVLLDYISTQKWQDVVDFDDHLDDISKDWLNP 198 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10629.858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10629.858.1 >prot_S-firma_F_contig10629.858.1 ID=prot_S-firma_F_contig10629.858.1|Name=mRNA_S-firma_F_contig10629.858.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=193bp MSVLERAAWLKIMLHAHTHSTVAVGGFLLGTQSPSGELVVVDAVPVYHHTback to top mRNA from alignment at S-firma_F_contig10629:4259..4916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10629.858.1 ID=mRNA_S-firma_F_contig10629.858.1|Name=mRNA_S-firma_F_contig10629.858.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=658bp|location=Sequence derived from alignment at S-firma_F_contig10629:4259..4916- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10629:4259..4916- >mRNA_S-firma_F_contig10629.858.1 ID=mRNA_S-firma_F_contig10629.858.1|Name=mRNA_S-firma_F_contig10629.858.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1158bp|location=Sequence derived from alignment at S-firma_F_contig10629:4259..4916- (Sphaerotrichia firma ET2_F female)back to top |