mRNA_S-firma_F_contig10629.857.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A7S0JMV2_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JMV2_CAFRO) HSP 1 Score: 259 bits (663), Expect = 1.780e-81 Identity = 142/272 (52.21%), Postives = 183/272 (67.28%), Query Frame = 1
Query: 19 ITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYV 834
I+ ++ E +F +L++ + E + ++ T VRVAGGWVRDK+L + +HDID+ALD TG FA +N L G T+ V+ I+ANP+QSKHL TA VLG ++DFVNLRTE Y DSRIPTA FGTA EDALRRDFTINA+FYNV EG +ED+T +DL+AGV+RTPL P TT LDDPLRVMRAVRFA+R+ F L DL +++ EV++AL K++RER+G ELD M+A P +L ML GL+P V
Sbjct: 103 ISLTDLEQRIFGVLKR-VLEQNGLR-TVVRVAGGWVRDKVLGKENHDIDLALDDMTGSAFAEAVNATLASSGERTHTVNVIQANPEQSKHLETATTCVLGMQLDFVNLRTEEYAADSRIPTA--------------------RFGTATEDALRRDFTINALFYNVNEGTIEDLTGHSFADLRAGVVRTPLPPVTTLLDDPLRVMRAVRFAARFGFRLAGDLREALELPEVRSALAGKVSRERVGAELDNMLASARPVGALRMLQARGLMPVV 352
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A5B8MDV0_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MDV0_9CHLO) HSP 1 Score: 261 bits (667), Expect = 7.020e-81 Identity = 144/272 (52.94%), Postives = 173/272 (63.60%), Query Frame = 1
Query: 19 ITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYV 834
I +E+E LF LLR D K VR AGGWVRDK+L R S DIDIALD +GE+FANHLNEYL G V I +NPDQSKHL TA+V G EIDFVNLR+E+Y SRIP FGTAEEDA+RRDFTINA+FYN+G+G VED+T KG+ DL+ +IRTPL TF DDPLRV+RAVRF+SR F L +L+ + EVKAAL TK++RERI E + MM GP P +L ++ GLL +
Sbjct: 4 IDLNEEERRLFDLLRSVARGLGD-KQVEVRCAGGWVRDKLLGRGSDDIDIALDTMSGEEFANHLNEYLTSHGEQRANVAVIRSNPDQSKHLETAKVKYQGIEIDFVNLRSESYASTSRIPEI--------------------EFGTAEEDAVRRDFTINALFYNIGQGNVEDLTGKGLEDLRNKLIRTPLPALQTFTDDPLRVLRAVRFSSRLNFDLHEELVEAASSSEVKAALQTKVSRERISTEFEAMMEGPDPKLALKLIRSFGLLDVI 254
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A1Y1I910_KLENI (Polynucleotide adenylyltransferase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I910_KLENI) HSP 1 Score: 256 bits (655), Expect = 8.530e-79 Identity = 143/279 (51.25%), Postives = 182/279 (65.23%), Query Frame = 1
Query: 1 VLESVSITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVF 837
V+E V + E+ + F L++ +A T +RVAGGWVRDK+L R S DIDIALD G DFA +NEYL G T + I++NPDQSKHL TA+V + G EIDFVNLR+ETY E SRIP A +FGTAE+DA RRD TIN++FYN+G G VED+T KG +DL A VIRTPL P+TTFLDDPLRV+RAVRF +R+ FTL P+L+ + EV+AAL TK++RER+G E+D M+ GP P ++ GL +F
Sbjct: 8 VVEMVELNAQEERI--FNTLKQTLAHFG--LKTQLRVAGGWVRDKLLRRDSGDIDIALDDQMGVDFAEKVNEYLRLRGEQTREIGHIKSNPDQSKHLETAKVKIHGTEIDFVNLRSETYAEGSRIPEA--------------------TFGTAEQDAFRRDLTINSLFYNIGTGEVEDLTGKGKADLLARVIRTPLPPRTTFLDDPLRVLRAVRFGARFGFTLDPELVEAASSAEVRAALGTKVSRERMGVEIDLMLKGPDPVGAMRWFDRCGLFSTIF 262
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A7S3FQV5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FQV5_9CHLO) HSP 1 Score: 254 bits (648), Expect = 3.040e-78 Identity = 135/274 (49.27%), Postives = 179/274 (65.33%), Query Frame = 1
Query: 13 VSITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYV 834
+++ + +ELELF +LR + + + T +R AGGWVRDK+L R S DIDIALD +GE +ANHLN+YL G V I++NP+QSKHL TA+V G EIDFVNLR+E+Y SRIP FGTAEEDA+RRDFTINA+FYN+G+G VED+T +G+ DL+ +IRTPL TF+DDPLRV+RAVRFASR+ F + D+ + EV+ AL TK++RERI E + M+ GP+P +L ++ GLL V
Sbjct: 1 MAVELNAEELELFGVLRNVVRDLN--LSTELRCAGGWVRDKLLGRESDDIDIALDNMSGETYANHLNDYLASRGEEQTSVAVIQSNPEQSKHLETAKVKYQGLEIDFVNLRSESYASSSRIPEI--------------------EFGTAEEDAMRRDFTINALFYNIGQGNVEDLTGRGLEDLRNKLIRTPLPALQTFMDDPLRVLRAVRFASRFSFEIHHDIAEAASSAEVRDALQTKVSRERISTEFESMLEGPNPKLALQLIKSFGLLDAV 252
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A453K870_AEGTS (Uncharacterized protein n=2 Tax=Triticeae TaxID=147389 RepID=A0A453K870_AEGTS) HSP 1 Score: 249 bits (635), Expect = 9.850e-78 Identity = 138/283 (48.76%), Postives = 181/283 (63.96%), Query Frame = 1
Query: 1 VLESVSITFSEKEL--ELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVFVF 843
V ESV +T E+ + L ++R F GT +RVAGGWVRDK+L + S DIDIALD TG++F +NEY + G + I+ NPDQSKHL TAR+ + G IDFVNLR+E Y E+SRIPT GTA+EDALRRD TIN++F+N+ VED+T +G+ DLK G+I TPL K+TFLDDPLRV+RA+RFA+R+ FTL DL + D++VK+ L +KI+RERIG E+D MM+ HP +L + D+GL VF F
Sbjct: 69 VRESVELTEEEERIFARLLDVVRHFGL------GTQLRVAGGWVRDKLLGKGSADIDIALDNMTGQNFCERVNEYSKFMGEEQKGIGVIQCNPDQSKHLETARMLIYGIWIDFVNLRSEKYAENSRIPTV--------------------EIGTAKEDALRRDLTINSLFFNINTKSVEDLTGRGLEDLKKGLIDTPLPAKSTFLDDPLRVLRAIRFAARFSFTLAEDLKEAASDEKVKSELGSKISRERIGHEVDLMMSDKHPVNALRYIRDLGLFYVVFAF 325
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A5A8DRU4_CAFRO (PolyA_pol domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DRU4_CAFRO) HSP 1 Score: 259 bits (663), Expect = 2.570e-77 Identity = 142/272 (52.21%), Postives = 183/272 (67.28%), Query Frame = 1
Query: 19 ITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYV 834
I+ ++ E +F +L++ + E + ++ T VRVAGGWVRDK+L + +HDID+ALD TG FA +N L G T+ V+ I+ANP+QSKHL TA VLG ++DFVNLRTE Y DSRIPTA FGTA EDALRRDFTINA+FYNV EG +ED+T +DL+AGV+RTPL P TT LDDPLRVMRAVRFA+R+ F L DL +++ EV++AL K++RER+G ELD M+A P +L ML GL+P V
Sbjct: 88 ISLTDLEQRIFGVLKR-VLEQNGLR-TVVRVAGGWVRDKVLGKENHDIDLALDDMTGSAFAEAVNATLASSGERTHTVNVIQANPEQSKHLETATTCVLGMQLDFVNLRTEEYAADSRIPTA--------------------RFGTATEDALRRDFTINALFYNVNEGTIEDLTGHSFADLRAGVVRTPLPPVTTLLDDPLRVMRAVRFAARFGFRLAGDLREALELPEVRSALAGKVSRERVGAELDNMLASARPVGALRMLQARGLMPVV 337
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A7S3PD87_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PD87_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.660e-77 Identity = 137/278 (49.28%), Postives = 184/278 (66.19%), Query Frame = 1
Query: 4 LESVSITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVF 837
++S ++ +E E ++F +L I + ++ T +RVAGGWVRDK+L + SHDIDIAL+ TG++FA ++N+YL+ G+ TN++ I ANPDQSKHL TA+V VLG+E+DFVNLR ETY E SRIP G+ FGTA EDALRRDFT+N +FYNV EG+VED T +G+SD+K +IRTPL TF DDPLR+MRA+RFASR F L ++ + E+ AL K++RERIG EL GM+ P +L ++ D L VF
Sbjct: 104 MKSPTVRVTELESQIFGVLLGTIKRFN-LEKTVIRVAGGWVRDKLLGKNSHDIDIALNNCTGKEFAEYVNKYLKEKGVKTNKIGVICANPDQSKHLETAKVKVLGQELDFVNLRAETYEESSRIP---------GMR-----------FGTALEDALRRDFTVNGLFYNVNEGIVEDFTKRGISDMKLRIIRTPLPACETFRDDPLRIMRAIRFASRLGFELDSEIKFCARLPEILNALANKVSRERIGVELMGMLDSKAPLRALSLISDFDLTKVVF 360
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A453K7T7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K7T7_AEGTS) HSP 1 Score: 249 bits (635), Expect = 2.900e-77 Identity = 138/283 (48.76%), Postives = 181/283 (63.96%), Query Frame = 1
Query: 1 VLESVSITFSEKEL--ELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVFVF 843
V ESV +T E+ + L ++R F GT +RVAGGWVRDK+L + S DIDIALD TG++F +NEY + G + I+ NPDQSKHL TAR+ + G IDFVNLR+E Y E+SRIPT GTA+EDALRRD TIN++F+N+ VED+T +G+ DLK G+I TPL K+TFLDDPLRV+RA+RFA+R+ FTL DL + D++VK+ L +KI+RERIG E+D MM+ HP +L + D+GL VF F
Sbjct: 40 VRESVELTEEEERIFARLLDVVRHFGL------GTQLRVAGGWVRDKLLGKGSADIDIALDNMTGQNFCERVNEYSKFMGEEQKGIGVIQCNPDQSKHLETARMLIYGIWIDFVNLRSEKYAENSRIPTV--------------------EIGTAKEDALRRDLTINSLFFNINTKSVEDLTGRGLEDLKKGLIDTPLPAKSTFLDDPLRVLRAIRFAARFSFTLAEDLKEAASDEKVKSELGSKISRERIGHEVDLMMSDKHPVNALRYIRDLGLFYVVFAF 296
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: K3Y624_SETIT (Ubiquitin-like domain-containing protein n=20 Tax=Paniceae TaxID=147428 RepID=K3Y624_SETIT) HSP 1 Score: 254 bits (648), Expect = 5.270e-77 Identity = 140/281 (49.82%), Postives = 182/281 (64.77%), Query Frame = 1
Query: 1 VLESVSITFSEKELELFTLLRKFIAECDDVKGTTVRVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVFVF 843
V E+V +T EKE ++F L + + GT +RVAGGWVRDK+L + S DIDIALD TG++F +NEYLE G + I+ NPDQSKHL TAR+ +L IDFVNLR+E Y E+SRIPT GTAEEDA RRD TIN++F+N+ VED+T +G+ DLK G+I TPL K TFLDDPLRV+RA+RFA+R+ FTL DL + D++VK+ L TKI+RERIG E+D MM+ HP +++ + D+GL VF F
Sbjct: 70 VRETVELT--EKEEQIFRRLLEVVRHFG--LGTQLRVAGGWVRDKLLGKDSADIDIALDNMTGQNFCEKVNEYLELIGEEQKGIGVIQCNPDQSKHLETARMLILDIWIDFVNLRSEKYAENSRIPT--------------------MEVGTAEEDAYRRDLTINSLFFNINNNSVEDLTGRGIEDLKEGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLAEDLKEAASDEKVKSELGTKISRERIGHEIDLMMSDKHPVKAMCDIRDLGLFYVVFSF 326
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Match: A0A8E2AYJ8_9APHY (PolyA_pol domain-containing protein n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2AYJ8_9APHY) HSP 1 Score: 251 bits (642), Expect = 1.650e-76 Identity = 137/277 (49.46%), Postives = 177/277 (63.90%), Query Frame = 1
Query: 13 VSITFSEKELELFTLLRKFIAECDDVKGTTV--RVAGGWVRDKILARPSHDIDIALDLHTGEDFANHLNEYLERFGMATNRVHTIEANPDQSKHLATARVWVLGEEIDFVNLRTETYTEDSRIPTAVRVSSQIGLS*VHTPPPLPQSFGTAEEDALRRDFTINAMFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFASRYRFTLCPDLLASVKDDEVKAALMTKITRERIGQELDGMMAGPHPNESLFMLHDVGLLPYVF 837
+ + +E E +L TLL + + KGT R+AGGWVRDK+L S+DIDIAL+ G FA + M T V IE+NPDQSKHL TAR +LG E+DFVNLR+E YT +SRIPT V +FGT +DALRRD TINA+FYNV VED T KG+ DL+ G IRTPLAP+ TFLDDPLRV+R VRFASR+ F L P+L + +D E++ AL +KI+RER+G+E+D MM G P ++ ++HD+ L P +F
Sbjct: 1 MEVRLTETEDQLCTLLDECTRRLKEEKGTQTACRIAGGWVRDKLLGSESNDIDIALENMMGVPFAEAFVAHCAEKKMTTKSVARIESNPDQSKHLETARTTILGTELDFVNLRSEEYTANSRIPTQV-------------------TFGTPLQDALRRDITINALFYNVHTRAVEDHTQKGLEDLRTGTIRTPLAPRETFLDDPLRVIRCVRFASRFGFDLVPELADAARDPEIQDALASKISRERVGEEVDKMMKGRDPLGAIALIHDLSLYPSIF 258 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10629.857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10629.857.1 >prot_S-firma_F_contig10629.857.1 ID=prot_S-firma_F_contig10629.857.1|Name=mRNA_S-firma_F_contig10629.857.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=115bp MFYNVGEGVVEDMTNKGMSDLKAGVIRTPLAPKTTFLDDPLRVMRAVRFAback to top mRNA from alignment at S-firma_F_contig10629:1513..2463- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10629.857.1 ID=mRNA_S-firma_F_contig10629.857.1|Name=mRNA_S-firma_F_contig10629.857.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=951bp|location=Sequence derived from alignment at S-firma_F_contig10629:1513..2463- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10629:1513..2463- >mRNA_S-firma_F_contig10629.857.1 ID=mRNA_S-firma_F_contig10629.857.1|Name=mRNA_S-firma_F_contig10629.857.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=690bp|location=Sequence derived from alignment at S-firma_F_contig10629:1513..2463- (Sphaerotrichia firma ET2_F female)back to top |