mRNA_S-firma_F_contig10613.840.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10613.840.1
Unique NamemRNA_S-firma_F_contig10613.840.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: F2U7M3_SALR5 (Phytanoyl-CoA dioxygenase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7M3_SALR5)

HSP 1 Score: 363 bits (933), Expect = 4.310e-123
Identity = 170/278 (61.15%), Postives = 205/278 (73.74%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG------VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGV-RVPTGEPMGGRFFPLAYDPSW 816
            RLS + +  Y  +G++  +  L+  +CD LLE+L +L DP   HP  GLF+E H NQT D +NVL HALGHWRI+  F DL++ P++TV  SQL+   G      VRFWHDQLFCKPA+HGGNVAWHQDYSYWTRT PM H+TVHVAL+ QT +NG++ +VPGSH WTRDG  PLPITADDFADM SI AVLTE+ER  +KPV   LK+G+  FHHPL VHGSY NRSP  RRAAV+NYFADGT + TD  L+ G+  VP G+P  GRFFPL +DP W
Sbjct:   72 RLSTEQLRFYDNNGYVGGVPALSSQQCDMLLEELATLADPSNPHPGHGLFHEYHANQTQDPNNVLLHALGHWRITPGFHDLIFLPSITVPASQLVVRHGSAPFSAVRFWHDQLFCKPAHHGGNVAWHQDYSYWTRTRPMQHLTVHVALEDQTADNGAIMYVPGSHHWTRDGA-PLPITADDFADMDSIQAVLTEDERRHWKPVHCCLKKGEAVFHHPLVVHGSYGNRSPRSRRAAVVNYFADGTTANTDGPLMDGIPAVPRGQPCAGRFFPLVFDPRW 348          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: UPI001E1D676F (phytanoyl-CoA dioxygenase domain-containing protein 1-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D676F)

HSP 1 Score: 358 bits (920), Expect = 1.120e-121
Identity = 166/275 (60.36%), Postives = 199/275 (72.36%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG----VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            + S D V ++ +DGFL N+ VLT  +CD LLED    L   K H    + YE H NQ+GD  NVL HALGHWR++K F DL + P V V  SQL+  +G    VRFWHDQLF KP  HGGNVAWHQDYSYWTRT+PM H+TVH+ALD QTEENG+L ++PGSH+WTR+GG PLP+T  +F DM SI  +LTEEE+  FKPV G LK+G+ SFHH L VHGSY NRS   RRAAVLNYF DG CS TDDELL G+++  G+ M G+FFPL +DP W
Sbjct:   38 KFSQDQVDKFWKDGFLLNVPVLTHKQCDLLLEDYKYFLGEEK-HLGMDMLYEYHSNQSGDPDNVLMHALGHWRLTKHFHDLAFLPEVVVHVSQLLEPSGIMSPVRFWHDQLFAKPPKHGGNVAWHQDYSYWTRTSPMCHLTVHIALDGQTEENGALNYIPGSHRWTRNGGNPLPVTDFNFKDMESIKTILTEEEKANFKPVCGNLKKGEASFHHALAVHGSYGNRSSKPRRAAVLNYFKDGVCSNTDDELLKGIKITKGQKMEGQFFPLVFDPEW 311          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: A0A8B8D187_CRAVI (phytanoyl-CoA dioxygenase domain-containing protein 1-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D187_CRAVI)

HSP 1 Score: 354 bits (908), Expect = 7.680e-120
Identity = 163/272 (59.93%), Postives = 201/272 (73.90%), Query Frame = 1
Query:    7 LSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLM---GGTGVRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPS 813
            LS D V Q+ RDGFL N+ +L  D+CD +LED    +     HP   + YE H NQ+GD +NVL H LGHWR++KLF DL++ P   V +SQL+       VRFWHDQLF KPA+HGG VAWHQDYSYWTRT PM H+T+H+AL+ QTEENG+L ++PGSH+WTR+G  PLP+T  DF DM SI  VLTEEE++ FKPVP +LK+GQ SFHH + VHGSY N+S   RRAAVLNYFADGT S TDD+LL G+++P G+ M G+FFPL YDP 
Sbjct:   41 LSKDKVDQFWRDGFLLNVPLLNPDQCDRILEDYKIFMGETT-HPGMDMMYEYHSNQSGDPNNVLIHGLGHWRLTKLFHDLVFLPQAVVPSSQLLVKDKTVPVRFWHDQLFAKPAHHGGCVAWHQDYSYWTRTQPMQHLTIHIALEDQTEENGTLYYIPGSHRWTRNGN-PLPVTDFDFKDMESIMTVLTEEEKKDFKPVPSMLKKGQASFHHAMAVHGSYGNKSDQPRRAAVLNYFADGTISNTDDDLLKGIKIPKGQKMEGQFFPLVYDPK 310          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: A0A1S3IIP6_LINUN (phytanoyl-CoA dioxygenase domain-containing protein 1 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IIP6_LINUN)

HSP 1 Score: 354 bits (909), Expect = 1.140e-119
Identity = 168/292 (57.53%), Postives = 201/292 (68.84%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGT----GVRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDD-----------------ELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            +L+ + V+QY RDGFL N+ VLTED+CD +L+D    +DP + HP   + YE H NQ+ D +NVL H LGHWR++    DLL+ P V V  SQL+  +     VRFWHDQLF KPA HGG VAWHQDYSYWTRTTPM H+TVH+ALD QTEENG LQ++PGSH+WTRDGG PLP+   +F DM  I  +L EEE+ AFKPVP LLK+G  SFHH L+VHGSY NRS   RRAAVLNYFADG  S TDD                 ELL   ++P G  M G+FFPL YDP+W
Sbjct:   43 KLTPEQVSQYWRDGFLLNVPVLTEDQCDKILQDFKYFMDPNQHHPGHAMLYEYHSNQSSDPNNVLIHTLGHWRLTSYLHDLLFLPQVVVPASQLIDESHPDAAVRFWHDQLFLKPAKHGGVVAWHQDYSYWTRTTPMKHLTVHIALDEQTEENGCLQYIPGSHRWTRDGG-PLPVLDFNFKDMEGIKTILAEEEKAAFKPVPSLLKKGHASFHHALSVHGSYGNRSDGPRRAAVLNYFADGVLSNTDDFMIRATSGTDTDENIVEELLNEGKIPKGNKMEGQFFPLVYDPAW 333          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: V3ZQP7_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZQP7_LOTGI)

HSP 1 Score: 349 bits (896), Expect = 3.630e-118
Identity = 162/274 (59.12%), Postives = 198/274 (72.26%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGG---TGVRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            +LS+  + ++ RDG+L N QVLTE +CD +LED  + L   K  P + L YE H NQ+GD  NVL H LGHWRI++ F D+++ P+V V  SQL+       VRFWHDQLF KP   GG VAWHQDYSYWTRT PM H+TVH+ALD Q+EENG+L ++PGSH WTRDGGKPLP+T  +F DM SI  +LTEEE+ AFKPV G L++G+ SFHHPL VHGSY NRS   RRAAVLNYFADG  S TD+ELL G  +P GE M G  +P+ +DP W
Sbjct:   29 KLSEKEIEEFWRDGYLLNKQVLTEKQCDQILEDYRTFLTN-KEPPKKDLLYEFHSNQSGDPDNVLMHCLGHWRITENFHDIVFMPSVVVPASQLLEQGHLIPVRFWHDQLFAKPPKIGGGVAWHQDYSYWTRTKPMKHLTVHIALDDQSEENGALHYIPGSHHWTRDGGKPLPVTDFNFKDMESIQTILTEEEKVAFKPVCGRLRKGEASFHHPLAVHGSYGNRSERPRRAAVLNYFADGVVSNTDEELLKGSLIPKGEKMDGNLYPIVFDPKW 301          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: UPI001EB03864 (phytanoyl-CoA dioxygenase, peroxisomal-like n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EB03864)

HSP 1 Score: 348 bits (894), Expect = 1.060e-117
Identity = 158/275 (57.45%), Postives = 202/275 (73.45%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG----VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            RL+ D +AQ+++DGFL N+ +LT ++CD +L+D     +  K HP   L YE H NQTGD S VL H LGHWR+++LF DL + P+V V  SQL+  TG    VRFWHDQLF KP +HGG VAWHQDYSYWTRT PM H+TVH+ALD Q E+NG+L+++PGSHKWTR+G  PLP+T  +FADM SI  +L +EE+ AFKP+ G L +G  SFHH L VHGSY N+S   RRAAVLNYFADG  S +++ELL G+ +P G  M G++FP+ YDP+W
Sbjct:   39 RLTKDQIAQFNKDGFLLNVPILTAEQCDRILDDYKYFTNEDKKHPGMDLLYEYHRNQTGDPSRVLMHCLGHWRMTQLFHDLAFLPSVVVPASQLLEPTGKEVPVRFWHDQLFAKPPHHGGVVAWHQDYSYWTRTKPMMHLTVHIALDEQFEQNGALKYIPGSHKWTRNGN-PLPVTDFNFADMESIQTILNDEEKAAFKPITGNLLKGHASFHHALAVHGSYGNKSDVPRRAAVLNYFADGVKSDSNEELLKGISIPKGNKMEGQYFPIVYDPAW 312          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: K1R9B1_CRAGI (Phytanoyl-CoA dioxygenase domain-containing protein 1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R9B1_CRAGI)

HSP 1 Score: 346 bits (887), Expect = 1.190e-116
Identity = 155/273 (56.78%), Postives = 204/273 (74.73%), Query Frame = 1
Query:    7 LSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLM---GGTGVRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            LS++ V Q+ +DGFL N+ +L+ ++CD +LED    +  +  HP   + YE H NQ+GD +NVL H LGHWR++KLF DL++ P   V +SQL+       VRFWHDQLF KP +HGG VAWHQDYSYWTRT P+ H+T+H+AL+ QT+ENG+L ++PGSH+WTRDG KPLP+T  +F DM SI  VLTEEE++ FKP+P LLK+G+ SFH  + VHGSY N+S   RR+AVLNYFADGT S TD++LL G+++P GE M G+FFPL +DP W
Sbjct:   41 LSEEKVEQFWKDGFLLNVPLLSPEQCDRILEDYKIFMGEIT-HPGMDMMYEYHSNQSGDPNNVLIHGLGHWRLTKLFHDLVFLPQAVVPSSQLLVKGKSLPVRFWHDQLFAKPPHHGGCVAWHQDYSYWTRTQPVQHITIHIALEDQTKENGTLYYIPGSHRWTRDG-KPLPVTDFNFKDMESIMTVLTEEEKKEFKPIPSLLKKGEASFHTGMAVHGSYGNKSASPRRSAVLNYFADGTISNTDEDLLKGIKIPKGEKMDGQFFPLLFDPKW 311          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: A0A813NN63_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813NN63_9BILA)

HSP 1 Score: 346 bits (888), Expect = 2.640e-116
Identity = 167/296 (56.42%), Postives = 202/296 (68.24%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLL---------------DPVKL-HPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG--------VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRV-PTGEPMGGRFFPLAYDPSW 816
            +L  + +  Y  +G+L NI+VL+E++CD +LED    L               D  ++ HP   LF+E H NQT D  NVL+H LGHWRI+ LF DL++HPA+TV +SQL+            V+FWHDQLF KP +HG NVAWHQDYSYWTRT PMNHMTVH+ALD QT ENG+L F+P SHKWTRD G PLP+T  DF DM SI  +LT EE+E FKPVP LLK+G  SFHHPL VHGSYPNR+   RRAAV+NYF  GT S TD+ LL  V V   GE + GRFFPL +DP+W
Sbjct:   48 QLDAEQIQFYKENGYLINIKVLSEEQCDRILEDYKKFLLWDQNDITTQAGSMNDAHRISHPGMHLFHEFHSNQTNDPDNVLSHMLGHWRITPLFHDLVFHPAITVPSSQLLASANSDGRSMVPVQFWHDQLFAKPPHHGANVAWHQDYSYWTRTIPMNHMTVHIALDEQTLENGTLHFIPKSHKWTRDNGHPLPVTDFDFKDMESIKTILTAEEKEQFKPVPSLLKKGYASFHHPLMVHGSYPNRTSLPRRAAVVNYFGQGTKSNTDEPLLLNVPVIKKGELITGRFFPLVFDPAW 343          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: F6ULA8_CIOIN (Probable alpha-ketoglutarate-dependent hypophosphite dioxygenase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6ULA8_CIOIN)

HSP 1 Score: 342 bits (876), Expect = 3.970e-115
Identity = 160/276 (57.97%), Postives = 201/276 (72.83%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTGV----RFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPT-GEPMGGRFFPLAYDPSW 816
            +L+   + QY R+GFL+ I+VL ++ECD LLED    ++    HP    FYE H NQTGD +NVL HALGHWRI++ F DL+YHPA+ V +SQL+ G  V    RFWHDQLF KPA +GG VAWHQDYSYWTRT PM H+T+H+ALD QTEENG + ++PGSH+W RDG KPLP+T  +F +M SI  +LT++E++ F P P  LKRG+VSFHHPL VHGSYPNRS   RRAAV+NY ADG  S+ D  LL G  + + GE +GG+F+PL YD  W
Sbjct:   31 KLAQTQIDQYFRNGFLAPIKVLNDEECDLLLEDYKKFIESDG-HP---YFYEFHKNQTGDSNNVLMHALGHWRITRAFHDLIYHPAICVPSSQLISGDNVECSVRFWHDQLFAKPAKYGGCVAWHQDYSYWTRTYPMKHLTIHIALDDQTEENGCIHYIPGSHRWNRDG-KPLPVTDFNFKNMESIKTILTKDEKQKFFPTPCKLKRGEVSFHHPLAVHGSYPNRSDQPRRAAVVNYIADGVGSSVDGCLLEGTNIMSKGEKLGGQFYPLVYDQKW 301          
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Match: UPI001458971E (probable alpha-ketoglutarate-dependent hypophosphite dioxygenase n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458971E)

HSP 1 Score: 342 bits (876), Expect = 5.390e-115
Identity = 158/274 (57.66%), Postives = 199/274 (72.63%), Query Frame = 1
Query:    4 RLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGLFYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG---VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEENGSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPGLLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAGVRVPTGEPMGGRFFPLAYDPSW 816
            + S+D V Q+  DGFL N+ +L+E++CD +L+D        + H    + YE H NQ+GD +NVL H LGHWR+++LF DL + P V V  SQL+       +RFWHDQLF KPA HGG VAWHQDYSYWTRT PM H+TVH+ALD QTEENG L +VPGSH+WTR+G  PLP+T  +FADM SI  +LTEEE++ FKPV G L++G  SFHH L VHGSY NRS   RRAAVLNYFADG  S T+++LL  +++P GE MGG+FFPL +DP+W
Sbjct:   39 QFSNDQVKQFWEDGFLLNVPLLSEEDCDMILKDYNYFTGENQ-HDGMDMLYEYHSNQSGDTNNVLMHCLGHWRMTELFHDLAFLPQVVVPGSQLLAENKTMPIRFWHDQLFAKPAKHGGVVAWHQDYSYWTRTGPMMHLTVHIALDDQTEENGGLYYVPGSHRWTRNGN-PLPVTDFNFADMESIQTILTEEEKQQFKPVCGKLRKGHASFHHALAVHGSYGNRSDGPRRAAVLNYFADGVKSTTNEDLLKNIKIPEGEKMGGQFFPLVFDPAW 310          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10613.840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2U7M3_SALR54.310e-12361.15Phytanoyl-CoA dioxygenase n=1 Tax=Salpingoeca rose... [more]
UPI001E1D676F1.120e-12160.36phytanoyl-CoA dioxygenase domain-containing protei... [more]
A0A8B8D187_CRAVI7.680e-12059.93phytanoyl-CoA dioxygenase domain-containing protei... [more]
A0A1S3IIP6_LINUN1.140e-11957.53phytanoyl-CoA dioxygenase domain-containing protei... [more]
V3ZQP7_LOTGI3.630e-11859.12Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI001EB038641.060e-11757.45phytanoyl-CoA dioxygenase, peroxisomal-like n=4 Ta... [more]
K1R9B1_CRAGI1.190e-11656.78Phytanoyl-CoA dioxygenase domain-containing protei... [more]
A0A813NN63_9BILA2.640e-11656.42Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
F6ULA8_CIOIN3.970e-11557.97Probable alpha-ketoglutarate-dependent hypophosphi... [more]
UPI001458971E5.390e-11557.66probable alpha-ketoglutarate-dependent hypophosphi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10613contigS-firma_F_contig10613:1534..2400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog946362.XP_004994944.1
PFAMsPhyH
Max annot lvl33154|Opisthokonta
Evalue7.07e-124
EggNOG OGs29SDJ@1|root,2RXDK@2759|Eukaryota,39GWY@33154|Opisthokonta
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
COG categoryS
Hectar predicted targeting categoryother localisation
Exons2
Model size819
Cds size819
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815600.4056358-CDS-S-firma_F_contig10613:1533..22141622815600.4056358-CDS-S-firma_F_contig10613:1533..2214Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10613 1534..2214 -
1696949445.0609343-CDS-S-firma_F_contig10613:1533..22141696949445.0609343-CDS-S-firma_F_contig10613:1533..2214Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10613 1534..2214 -
1622815600.4182293-CDS-S-firma_F_contig10613:2262..24001622815600.4182293-CDS-S-firma_F_contig10613:2262..2400Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10613 2263..2400 -
1696949445.071315-CDS-S-firma_F_contig10613:2262..24001696949445.071315-CDS-S-firma_F_contig10613:2262..2400Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10613 2263..2400 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10613.840.1prot_S-firma_F_contig10613.840.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10613 1534..2400 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10613.840.1

>prot_S-firma_F_contig10613.840.1 ID=prot_S-firma_F_contig10613.840.1|Name=mRNA_S-firma_F_contig10613.840.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=273bp
LRLSDDLVAQYHRDGFLSNIQVLTEDECDALLEDLTSLLDPVKLHPARGL
FYELHFNQTGDDSNVLAHALGHWRISKLFRDLLYHPAVTVATSQLMGGTG
VRFWHDQLFCKPANHGGNVAWHQDYSYWTRTTPMNHMTVHVALDAQTEEN
GSLQFVPGSHKWTRDGGKPLPITADDFADMTSINAVLTEEEREAFKPVPG
LLKRGQVSFHHPLTVHGSYPNRSPHQRRAAVLNYFADGTCSATDDELLAG
VRVPTGEPMGGRFFPLAYDPSW*
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mRNA from alignment at S-firma_F_contig10613:1534..2400-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10613.840.1 ID=mRNA_S-firma_F_contig10613.840.1|Name=mRNA_S-firma_F_contig10613.840.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=867bp|location=Sequence derived from alignment at S-firma_F_contig10613:1534..2400- (Sphaerotrichia firma ET2_F female)
CTCAGGCTCTCTGACGACCTCGTGGCGCAGTATCACCGCGATGGCTTCCT GTCCAACATCCAAGTCCTCACAGAGGACGAGTGTGACGCCCTTCTTGAAG ACCTGACATCGCTGCTGGACCCCGTGAAGCTGCACCCGGTACGCAATGCT CTTTTTTTGTCCTCTTCACGCCTAACCTTCCCCCAGGCCCGCGGCTTGTT CTACGAGCTCCACTTCAACCAAACCGGCGACGACAGCAACGTGCTGGCGC ACGCCCTCGGCCACTGGCGCATCTCCAAGCTTTTCCGGGACTTGCTGTAT CACCCCGCCGTCACGGTGGCCACCTCCCAGCTCATGGGCGGCACCGGCGT CCGGTTCTGGCACGACCAGCTGTTCTGCAAGCCCGCCAACCACGGCGGCA ACGTCGCCTGGCACCAAGATTACAGCTACTGGACGCGAACGACGCCCATG AACCACATGACGGTCCACGTCGCGCTGGACGCCCAAACCGAGGAAAACGG CAGCCTGCAGTTCGTGCCCGGGAGCCACAAGTGGACCCGGGACGGCGGCA AGCCGCTCCCCATCACCGCCGACGACTTTGCGGACATGACCTCCATCAAC GCCGTCCTGACGGAGGAGGAGCGGGAGGCCTTCAAGCCCGTGCCTGGCCT CCTGAAGCGCGGCCAGGTCTCGTTTCACCACCCCCTCACCGTCCATGGCT CGTACCCCAACCGGTCCCCGCACCAGCGGCGCGCGGCCGTCCTCAACTAC TTTGCCGACGGCACCTGCAGCGCCACGGACGACGAGCTGCTTGCGGGTGT CAGGGTGCCCACAGGAGAGCCCATGGGCGGCCGCTTCTTCCCCCTGGCGT ACGACCCGTCGTGGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10613:1534..2400-

>mRNA_S-firma_F_contig10613.840.1 ID=mRNA_S-firma_F_contig10613.840.1|Name=mRNA_S-firma_F_contig10613.840.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1638bp|location=Sequence derived from alignment at S-firma_F_contig10613:1534..2400- (Sphaerotrichia firma ET2_F female)
CTCAGGCTCTCTGACGACCTCGTGGCGCAGTATCACCGCGATGGCTTCCT
GTCCAACATCCAAGTCCTCACAGAGGACGAGTGTGACGCCCTTCTTGAAG
ACCTGACATCGCTGCTGGACCCCGTGAAGCTGCACCCGCTCAGGCTCTCT
GACGACCTCGTGGCGCAGTATCACCGCGATGGCTTCCTGTCCAACATCCA
AGTCCTCACAGAGGACGAGTGTGACGCCCTTCTTGAAGACCTGACATCGC
TGCTGGACCCCGTGAAGCTGCACCCGGCCCGCGGCTTGTTCTACGAGCTC
CACTTCAACCAAACCGGCGACGACAGCAACGTGCTGGCGCACGCCCTCGG
CCACTGGCGCATCTCCAAGCTTTTCCGGGACTTGCTGTATCACCCCGCCG
TCACGGTGGCCACCTCCCAGCTCATGGGCGGCACCGGCGTCCGGTTCTGG
CACGACCAGCTGTTCTGCAAGCCCGCCAACCACGGCGGCAACGTCGCCTG
GCACCAAGATTACAGCTACTGGACGCGAACGACGCCCATGAACCACATGA
CGGTCCACGTCGCGCTGGACGCCCAAACCGAGGAAAACGGCAGCCTGCAG
TTCGTGCCCGGGAGCCACAAGTGGACCCGGGACGGCGGCAAGCCGCTCCC
CATCACCGCCGACGACTTTGCGGACATGACCTCCATCAACGCCGTCCTGA
CGGAGGAGGAGCGGGAGGCCTTCAAGCCCGTGCCTGGCCTCCTGAAGCGC
GGCCAGGTCTCGTTTCACCACCCCCTCACCGTCCATGGCTCGTACCCCAA
CCGGTCCCCGCACCAGCGGCGCGCGGCCGTCCTCAACTACTTTGCCGACG
GCACCTGCAGCGCCACGGACGACGAGCTGCTTGCGGGTGTCAGGGTGCCC
ACAGGAGAGCCCATGGGCGGCCGCTTCTTCCCCCTGGCGTACGACCCGTC
GTGGTGAGCCCGCGGCTTGTTCTACGAGCTCCACTTCAACCAAACCGGCG
ACGACAGCAACGTGCTGGCGCACGCCCTCGGCCACTGGCGCATCTCCAAG
CTTTTCCGGGACTTGCTGTATCACCCCGCCGTCACGGTGGCCACCTCCCA
GCTCATGGGCGGCACCGGCGTCCGGTTCTGGCACGACCAGCTGTTCTGCA
AGCCCGCCAACCACGGCGGCAACGTCGCCTGGCACCAAGATTACAGCTAC
TGGACGCGAACGACGCCCATGAACCACATGACGGTCCACGTCGCGCTGGA
CGCCCAAACCGAGGAAAACGGCAGCCTGCAGTTCGTGCCCGGGAGCCACA
AGTGGACCCGGGACGGCGGCAAGCCGCTCCCCATCACCGCCGACGACTTT
GCGGACATGACCTCCATCAACGCCGTCCTGACGGAGGAGGAGCGGGAGGC
CTTCAAGCCCGTGCCTGGCCTCCTGAAGCGCGGCCAGGTCTCGTTTCACC
ACCCCCTCACCGTCCATGGCTCGTACCCCAACCGGTCCCCGCACCAGCGG
CGCGCGGCCGTCCTCAACTACTTTGCCGACGGCACCTGCAGCGCCACGGA
CGACGAGCTGCTTGCGGGTGTCAGGGTGCCCACAGGAGAGCCCATGGGCG
GCCGCTTCTTCCCCCTGGCGTACGACCCGTCGTGGTGA
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