mRNA_S-firma_F_contig10555.767.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: F0YAA8_AURAN (MFS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN) HSP 1 Score: 261 bits (668), Expect = 1.320e-76 Identity = 139/349 (39.83%), Postives = 210/349 (60.17%), Query Frame = 1
Query: 1 VGDSTFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGTLLISNDRKHWPGEVD----IITASHASNLAFTG-NGTVDGQGLVWWQNRDDYRPRMMYLENCDTVIIDGLTFKDSPNHNLELYADHTEVSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAHSNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFYDGGD----GGDATYVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDNFTHEDTDGSFTCSEA 1020
+GD+T NV D+GA GDG+ DDT+A+Q A++A +GG ++P HTF+ +++++ SH Q+DG L ++ DR ++ + + I+ +++A TG +G +DG G WW ++ D+RP M+ + +++ G+TF + P+H LEL A E+S + I APPST SHN D DVHG Y Y+HD TGDD++A H+NHTLV N FGTGHGASIGSL + ++VTN+T +VF TT RIK GR +V Y NL+M +V D++MFYD T +++++F ++ + N G F CD+ SPC + D H TD ++TC ++
Sbjct: 529 IGDATHNVFDFGAAGDGETDDTAALQAAINACA-KTGGLAVVPAGHTFVITSVTLNVSHTGLQIDGALKVA-DRDYYTAKAEGKDVIVITKGITDVAITGTDGLIDGGGAAWWPHKGDFRPHMVGSDRATRLLVHGVTFLNPPSHCLELSAAFVELSHVNIFAPPSTDAPVVSHNADAYDVHGAYAYVHDVNFTTGDDDVAFHANHTLVENSYFGTGHGASIGSLCD-AWVTNVTVRNVVFHGTTAGCRIKTRPKCA-GRVWDVLYENLTMTDVEMVFDISMFYDNDHPYPKDKKTTLKIEDVTFRDVTSANHKFSGSFYCDEDSPCERLTFDR-VHLVTDDAWTCKQS 872
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: A0A7S3JSG0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSG0_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.320e-60 Identity = 131/349 (37.54%), Postives = 195/349 (55.87%), Query Frame = 1
Query: 1 VGDSTFNVL-DYGAKGDGKNDDTSAIQKALD--AAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGTLLISNDRKHWP--GEVDIITASHASNLAFTGNGTVDGQGLVWW-QNRDD--YRPRMMYLE--NCDTVIIDGLTFKDSPNHNLELYADHTEVSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAHSNHTLVSNCQFGT---------GHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFYDGGD---GGDATYVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDNFT 981
+G F+V+ DYGA GDGK DDT A+Q ALD AA GGT+ L ++ FLS L++ GS A ++G L +K+W + IT N G G ++G G +WW Q++DD RP++ ++ + D ++ +T +SP+H E+YAD++E++ + I + + NTDG+DVHG YIHD +I+ GDDNIA H++ L+ NC FG+ GHGASIGSL ++++NIT VF T RIKVH +A NG ++ Y NL +++V + + VT Y + +++ +ISF NI N+ PG F C K +PC L + T
Sbjct: 34 IGSDAFDVVADYGAIGDGKTDDTDALQAALDDCAASRNGGGTIKLGKEYEFLSLPLTVTGSGCALMIEGKLT----QKYWEVTKKSAFITIDGVDNFLLYGGGMINGSGPLWWIQDKDDEDVRPKLFSVKGPSSDLALL-NITLYNSPDHTCEVYADNSEIAFVNISVDWYIDDGH-APNTDGVDVHGTPFYIHDCIIDVGDDNIAIHASDVLIENCIFGSDNGPTDAVHGHGASIGSLGSDTFLSNITVRDSVFKGTIYGPRIKVHDDATNGHVHDIIYENLYIDSVQKGIYVTAEYTLDTTRADSNKPFILSDISFKNITMINTDTPGYFECSKSTPCLDFHLTDIT 376
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: A0A7S3JSI7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSI7_9STRA) HSP 1 Score: 195 bits (495), Expect = 8.950e-55 Identity = 124/364 (34.07%), Postives = 193/364 (53.02%), Query Frame = 1
Query: 1 VGDSTFNVL-DYGAKGDGKNDDTSAIQKALD--AAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGTLLISNDRKHWPG--------EVDIITASHASNLAFTGNGTVDGQGLVWWQNRDDY---RPRMMYLENCDTVIIDGLTFKDSPNHNLELYADHTEVSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAHSNHTLVSNCQFGT---------GHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVA-QTVDVTMFYDGGDGGDAT-YVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDNFTHE-DTDGSFTCS 1014
+G F+V+ DYGA GDGK DDT A+Q ALD AA GG + L + FLS L++ GS A +++G L +K W E I + S+ G G ++G G WW + D RP+++ + + + D + F +S NHNLE+Y D+TE++ + I + + NTDGIDVHG YIHD +I+ GDDNIA H++ LV NC FG+ GHG SIGS+ Y++NIT +F +T K+H++A NG +V Y NL +++ + + + + Y + +V+++ ++ NI N+ PG FVC PC + + T + +++ ++CS
Sbjct: 34 IGSDIFDVVVDYGAVGDGKTDDTDALQAALDDCAASRNGGGIIKLLKGYEFLSLPLTLSGSGCALKIEGKLT----QKFWQPSMSQGDIPEAFITVSDGVSDFLIYGGGIINGNGPTWWNSSGDTYANRPKLLDAKATNVALYD-IQFYNSANHNLEMYCDNTEIAFVNITVDWDINDGD-APNTDGIDVHGAPFYIHDCIIDVGDDNIAIHASDLLVENCVFGSEDGPDNAVHGHGVSIGSIGSNIYLSNITLRNSIFKHTHVGPNCKIHSDATNGHIHDVLYENLIIDSAQLEGLRINVEYSLSQSQQSKPFVLNDFTYKNITMINTDVPGTFVCSDQKPCLDMHFIHITAQGNSEDDWSCS 391
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: UPI001FAF54B8 (glycosyl hydrolase family 28 protein n=1 Tax=Parabacteroides sp. FAFU027 TaxID=2922715 RepID=UPI001FAF54B8) HSP 1 Score: 176 bits (447), Expect = 4.780e-48 Identity = 121/342 (35.38%), Postives = 183/342 (53.51%), Query Frame = 1
Query: 1 VGDSTFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGTL---LISNDRKHWPGEV----DIITASHASNLAFTGNGTVDGQGLVWWQNRDDY---RPRMMYLENCDTVIIDGLTFKDSPNHNLELYADHTEV--SGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNI--AAHSNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFYDG-GDGGDATYVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDNFT 981
+ D F++ +GA D K D+T AIQ A++AA A GG V++P T+L L S++ FQ+D + DR +PG + I+ + ++A TG GT+DGQG WW + + RPRM+ L +CD V+++ +T +SP ++ + T V SG+T+ AP S T NPSHNTD +V G + I + I+TGDDN A ++ L++NC++G GHG SIGS +G V+NIT + FTNT +R+K + + G N+TY NL M NV + + Y+ G+ + + I+ + P E V +K R I N T
Sbjct: 34 ISDKVFDIKSFGAVSDKKTDNTQAIQNAINAADKAGGGRVVIPAG-TYLCGPLQFT-SNLNFQIDSAATLRFLPIDR--YPGGLAEGNSFISGTKLHDIAITGKGTIDGQGSPWWPHAKEAGAKRPRMIVLRDCDKVLVENVTLTNSPMFHIAIGGKSTNVTVSGVTVRAPASDDTINPSHNTDACNVTGHNILIKNCDISTGDDNYTCAGGTSDVLITNCKYGYGHGVSIGSYTQG--VSNITVENCTFTNTECGIRLKSDRD-RGGVVQNLTYRNLKMNNVRIPILIYAAYNAKGEYRNLQKLTPEIA--------ATYPSETVTEKTPAFRNITFSNIT 360
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: A0A1V9G104_9BACT (Uncharacterized protein n=1 Tax=Niastella vici TaxID=1703345 RepID=A0A1V9G104_9BACT) HSP 1 Score: 172 bits (437), Expect = 1.380e-46 Identity = 119/336 (35.42%), Postives = 177/336 (52.68%), Query Frame = 1
Query: 1 VGDSTFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGT---LLISNDRKHWPGEV----DIITASHASNLAFTGNGTVDGQGLVWW---QNRDDYRPRMMYLENCDTVIIDGLTFKDSPNHNLELYAD--HTEVSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAH--SNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVA---------------------QTVDVTMFYDGGDGGDATYVVDNISFVNIKA 903
+ D TF++ DYGA D D+T+A Q A++AA +A GG V++P T+L L + S++ QLD LL+ D+ +PG D I+ + ++A TG GT+DGQG WW ++++ RPRM+ L+ C+ V+I+ +T K+SP ++ + + VSG+T+ AP ST +NPSHNTD DV G + I D I+TGDD+ +++ + NC +G GHG SIGS +G V+ F NT +RIK + + G N+TY NL M NV T ++ Y + T V NI+F NI A
Sbjct: 33 IPDKTFSIKDYGAVADDHTDNTTAFQNAINAANNAGGGKVIVPAG-TYLCGPLQLY-SNLNLQLDAEAVILLLPIDK--YPGGTTTGTDFISGAKLHDIAITGKGTIDGQGSAWWPLAKDKNAKRPRMIALKECNKVLIENVTLKNSPMFHMAISGKSANVTVSGVTVRAPASTDPANPSHNTDACDVSGKDILIKDCDISTGDDDFTCGGGTSNVHIMNCTYGYGHGLSIGSYTKGG-VSXXXXXXXTFNNTECGIRIKSDRD-RGGLVQNLTYRNLKMTNVGIPILIYAAYNAKEKEFRNLQKMTPEIASTYPPAPVSELTPVYKNITFENITA 362
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: A0A386HNU4_9BACT (Uncharacterized protein n=1 Tax=Arachidicoccus soli TaxID=2341117 RepID=A0A386HNU4_9BACT) HSP 1 Score: 170 bits (430), Expect = 1.310e-45 Identity = 115/343 (33.53%), Postives = 182/343 (53.06%), Query Frame = 1
Query: 1 VGDSTFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLDGTLLISN-DRKHWPGEVD----IITASHASNLAFTGNGTVDGQGLVWWQ----NRDDYRPRMMYLENCDTVIIDGLTFKDSPNHNLELY-ADHTEVSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAH--SNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFYDGGDGGDATYVVDNISFVNIKAKNSGAPGEF----VCDKHSPCRGILLDNFT 981
+ + FN+ +GA D + D+T AIQ A+DA GG V +P +L L S++ QLD ++ K +PG ++ IT + +++ TG G +DGQG WW + +RPRM+ L +CD V+I+G+T +SP ++ + +++ VSG+T+ AP ST NPSHNTD DV G ++ I + I+TGDD+ ++ L+ NC +G GHG SIGS G V+NIT + FTNT +RIK + + G N+TY NL M +V + + M+ A+Y+ + +++ N G++ + DK R + +N T
Sbjct: 33 IPNKVFNINSFGAISDNQTDNTQAIQHAIDATVKTGGGKVEIPAG-IYLCGPLEFT-SNLCLQLDSNAILRLLPIKRYPGGLNEGIAFITGKNLHDISITGKGIIDGQGSPWWPYAKIKGNYHRPRMIALNHCDKVLIEGVTLMNSPMFHIAISGSENVTVSGVTVHAPASTDPVNPSHNTDACDVSGHHILIENCNISTGDDDYTCGGGTSDVLIRNCHYGNGHGVSIGSGTHGG-VSNITVEDCTFTNTDCGIRIKSDRD-RGGIVENMTYRNLKMIHVG--IPILMY--------ASYMAKGKEYRDLQRINPEIAGDYPAAALTDKTPIYRNFVFENIT 361
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: UPI001B0EA9D4 (Uncharacterized protein n=1 Tax=Niabella sp. TaxID=1962976 RepID=UPI001B0EA9D4) HSP 1 Score: 170 bits (430), Expect = 1.480e-45 Identity = 108/282 (38.30%), Postives = 159/282 (56.38%), Query Frame = 1
Query: 13 TFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLD-GTLLISNDRKHWPGEV----DIITASHASNLAFTGNGTVDGQGLVWWQNRDDY---RPRMMYLENCDTVIIDGLTFKDSPNHNLELYADHTE---VSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAH--SNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTV 819
TF + D+GA D D+T+AIQ+A++AA A GGTV++P +L L + S++ Q+D G +L +PG D I+ S ++A TG+GT+DGQG WW D RPRM+ L+NC+ ++I G+T ++P ++ + T V +T+ AP S NPSHNTD DV G + I D I+TGDDN +++ + NC++G GHG SIGS +G V+N + FTNT +RIK + + G N+TY N+ MENV +
Sbjct: 38 TFVIKDFGALADNSTDNTAAIQQAINAADKAGGGTVIVPPG-VYLCGPLQFN-SNLNLQIDSGAILRLLPINKYPGGTTLGTDFISGSKLHDVAITGSGTIDGQGAPWWPAYKDKGVKRPRMIALQNCERILIRGVTLMNAPMFHIAISGKTTNNVTVEKVTVRAPASDDPHNPSHNTDACDVAGDKILIKDCDISTGDDNFTCGGGTSNVHIQNCKYGYGHGLSIGSYTKGG-VSNFLIEDCSFTNTECGIRIKSDRD-RGGVVQNLTYRNIKMENVGMPI 315
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: W0F4S6_9BACT (Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 TaxID=929713 RepID=W0F4S6_9BACT) HSP 1 Score: 167 bits (422), Expect = 2.220e-44 Identity = 106/281 (37.72%), Postives = 156/281 (55.52%), Query Frame = 1
Query: 16 FNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLD-GTLLISNDRKHWPGEV----DIITASHASNLAFTGNGTVDGQGLVWWQNRDDY---RPRMMYLENCDTVIIDGLTFKDSPNHNLELYADHTE---VSGITILAPPSTGTSNPSHNTDGIDVHGLYMYIHDSVINTGDDNIAAH--SNHTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTV 819
F++ D+GA + D+T IQ+A+DAA A GGTV++P +L L S + F++D G +L +PG D I+ S ++A TG+GT+DGQG WW D RPRM+ L+NC+ ++I G+T ++P ++ + T V +T+ AP S NPSHNTD DV G + I D I+TGDDN +++ + NC++G GHG SIGS +G V+N + FTNT +RIK + + G N+TY N+ MENV +
Sbjct: 39 FSIKDFGAIANNSTDNTGVIQQAIDAADKAGGGTVIIPPG-IYLCGPLQFKSS-LNFRIDSGAVLRLLPMDRYPGGTKSGTDFISGSKLHDVAITGSGTIDGQGAPWWPAYKDKGVKRPRMIALQNCERLLIRGVTLMNAPMFHIAISGKATNNVTVDKVTVRAPASDDPLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGGTSNVHIQNCKYGYGHGLSIGSYTKGG-VSNFLIEDCSFTNTECGIRIKSDRD-RGGVVQNLTYRNIKMENVGMPI 315
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: A0A7L5A6B2_9BACT (Glycoside hydrolase family 28 protein n=1 Tax=Granulicella sp. WH15 TaxID=2602070 RepID=A0A7L5A6B2_9BACT) HSP 1 Score: 160 bits (405), Expect = 5.480e-42 Identity = 121/354 (34.18%), Postives = 181/354 (51.13%), Query Frame = 1
Query: 31 YGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSHIAFQLD--GTLLISNDRKHWP-------GEVDIITASHASNLAFTGNGTVDGQGLVWWQNR-DDY--------RPRMMYLENCDTVIIDGLTFKDSPNHNLELY-ADHTEVSGITILAPPSTGTSNPSHNTDGID-VHGLYMYIHDSVINTGDDNIAAHSN------------HTLVSNCQFGTGHGASIGSLAEGSYVTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFYDG---GDGG----DATYVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDN 975
+GAKGDGK DT+A+Q+A+D SGG V L G T++S L + SH+ QLD TLL S DR+ +P +V +I A HA ++ TG GTVDG G VWW+ + +D+ RP ++ + N ++I+G+T ++SP +N+ + D V + IL P T NTDGID V ++ I +I+TGDDNIA S +V +C GHG SIGS G V N+T +R+ F T +RIK + N Y +++ME+V +++T +Y G D G + T +I+ N+ A + G + SP + ++L N
Sbjct: 42 FGAKGDGKTKDTAALQRAIDQCAKKSGGVVHL-GSGTYVSAPLDLK-SHVHLQLDKDATLLGSPDREDYPIREDAKWRKVSLIHADHAVDIGITGEGTVDGNGHVWWEAKAEDHKRGAPEAPRPLLIDITNSKQILIEGVTIQNSPQYNITTFWCDGLTVRNVKILNPGRTAP-----NTDGIDPVSTSHVLIEHDLIDTGDDNIAIKSGLVERGDPNVPSTDIVVRDCILRNGHGLSIGSEVAGG-VRNVTVERVTFAGTRQGIRIK-SARGRGNDVGNFVYRDITMEDVETPIEITNYYTGLVKNDPGQPVTEHTPRFHDITIENVTATGAKRAGVIMGLPESPIKNVVLKN 386
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Match: Q9SWS3_SOYBN (Polygalacturonase PG1 n=9 Tax=Phaseoleae TaxID=163735 RepID=Q9SWS3_SOYBN) HSP 1 Score: 160 bits (404), Expect = 1.020e-41 Identity = 116/358 (32.40%), Postives = 170/358 (47.49%), Query Frame = 1
Query: 10 STFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSKALSIDGSH----IAFQLDGTLLISNDRKHW-PGEVDIITASHASNLAFTGNGTVDGQGLVWWQNRDD-YRPRMMYLEN----------------CDTVIIDGLTFKDSPNHNLELYA-DHTEVSGITILAPPSTGTSNPSHNTDGIDVHGLY-MYIHDSVINTGDDNIAAHS--NHTLVSNCQFGTGHGASIGSLAEGSY---VTNITFDRIVFTNTTTAMRIKVHTNAKNGRCSNVTYSNLSMENVAQTVDVTMFY-DGGD--GGDATYVVDNISFVNIKAKNSGAPGEFVCDKHSPCRGILLDNFTHE 987
++FNVLDYGAKGDG DDT A + A AA G T+++P FL K +S G + I FQLDG ++ + W G + + S + + G G +DGQG VWW N Y P + LE+ D V + G+T ++S +L+ + + +VSGI++ +P S NTDGI + + I+ S + GDD ++ + + V N G GHG SIGSL + V N+T + NT T +RIK G N+ +SN+ + V + + +Y DGG + V I +VN+K + P F C + PC GI LD E
Sbjct: 44 TSFNVLDYGAKGDGHADDTKAFEDAWAAACKVEGSTMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSSEAWGSGTLQWLEFSKLNTITIRGKGVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSSP------GDSPNTDGIHLQNSQNVVIYSSTLACGDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTVRDVTIQNTLTGVRIKTWQGGS-GSVQNIMFSNVQVSGVQTPISIDQYYCDGGRCRNESSAVAVSGIHYVNVKGTYTKEPIYFACSDNLPCSGITLDTIQLE 394 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10555.767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10555.767.1 >prot_S-firma_F_contig10555.767.1 ID=prot_S-firma_F_contig10555.767.1|Name=mRNA_S-firma_F_contig10555.767.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=340bp VGDSTFNVLDYGAKGDGKNDDTSAIQKALDAAKDASGGTVLLPGDHTFLSback to top mRNA from alignment at S-firma_F_contig10555:682..2189- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10555.767.1 ID=mRNA_S-firma_F_contig10555.767.1|Name=mRNA_S-firma_F_contig10555.767.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1508bp|location=Sequence derived from alignment at S-firma_F_contig10555:682..2189- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10555:682..2189- >mRNA_S-firma_F_contig10555.767.1 ID=mRNA_S-firma_F_contig10555.767.1|Name=mRNA_S-firma_F_contig10555.767.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2040bp|location=Sequence derived from alignment at S-firma_F_contig10555:682..2189- (Sphaerotrichia firma ET2_F female)back to top |