mRNA_S-firma_F_contig1055.762.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A6H5KV80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV80_9PHAE) HSP 1 Score: 783 bits (2021), Expect = 1.810e-271 Identity = 455/777 (58.56%), Postives = 473/777 (60.88%), Query Frame = 1
Query: 139 MFPAITMGNNPSRPTDSRREAPTRDTTHWAAAPASVNMDIIGVAGPLGWADSTYSGSHVSSTTIDSTMDSTPSSGEEGA-PLRRRLSSKTKREISEEEQEFFDSMELNIQRKQSYGGPIPPEPEPHQWTNFIGGTLNSVSREHKPHYMFRTVPYMDMEILRKHNKHLNSGATRPAKLPLKRRNSSTSVELCLFMDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGG------FHETRAAGSNGGEGGW--------------RVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPPRRRSESLRATXXXXXXXXXXXXXXXXXXXETEALRVKQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASRAPEGGRARGVPGISHRLDGRVYRSPFSRLPPSLEELVDMTQTDAGGRQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------GHYSEKRCCELVRKMLLAVRHCHTHGLCHRDLKLENWVFESDKPDAELKLIDFGLSTYFGK 1923
M AI MGNN S PTD R A R+ HW +A A+VNMD+IG AG LGWADS TIDSTMDSTPSSGEEG PL RRLSSKTKR+ISEEEQEFFDSME NIQRKQSYGGP+PPEPEPHQWTNFIGGTLNSVSREHKPHYMFRTVPYMDM+IL KHN+HLN A RPAKLPLKRRNSS+SVELCLF+DDLDVQAMIKVTSLVLHHHI+EGCAMSWPIDPRFNIFNDPPGMEV S G G G EGGW VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIF KNWRSV+LCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVA+LQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYD SPPRRRSES +AT XXXXX E EA RV++EA XX A+RAPEG RARGVPGISHRLDGRVYRS +SRLPPSLEELVDMTQTDAGGRQ GHYSEKRCCELVRKML AVRHCH HGLCHRDLKLENWVFESDKPDAELKLIDFGLSTYFGK
Sbjct: 1 MIEAIIMGNNASSPTDRRSTASAREPAHWGSAEAAVNMDVIGTAGALGWADSCN--------TIDSTMDSTPSSGEEGGVPLTRRLSSKTKRQISEEEQEFFDSMERNIQRKQSYGGPMPPEPEPHQWTNFIGGTLNSVSREHKPHYMFRTVPYMDMDILHKHNRHLNWEAARPAKLPLKRRNSSSSVELCLFIDDLDVQAMIKVTSLVLHHHISEGCAMSWPIDPRFNIFNDPPGMEVASSSNGSSNGSXXXXXXXXXXXXXXXGREGGWGSRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFGKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDTSPPRRRSESFKATEALAIKEAAARAXXXXXAGENEARRVRREAAXXTAALVAEEDLEDLRGAGEGGRRGAGAVVGSGKERDNLLQIG----GATRAPEGRRARGVPGISHRLDGRVYRSCYSRLPPSLEELVDMTQTDAGGRQVLPRDHQQHERHKRISSCILRRHKQATLQNLILSEVGDVRAAYDVSDNDSRTKRSSKVDLAEAAGSTGVGAILGVGISGLVQVVRHKKTGVSYAMKTLKLGRLEDFHKTDELRNEIMVMSQLNHPNICRLLEIYESPTRDSICLILELCTGGELLSRLNKVGHYSEKRCCELVRKMLSAVRHCHAHGLCHRDLKLENWVFESDKPDAELKLIDFGLSTYFGK 765
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A836C9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q1_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.550e-66 Identity = 138/324 (42.59%), Postives = 191/324 (58.95%), Query Frame = 1
Query: 421 EEEQEFFDSMELNIQRKQSYGGPIPPEPEPHQWTNFIGGTLNSVSREHKPHYMFRTVPYMDMEILRKHNKH---LNSGATRPAKLPLKRRNSSTSVELCLFMDDLDVQAMIK--------------------------------VTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGV 1287
+E +EF +E + RKQ+ P EP W N++GG+LN+ SR HKPH+ +T PY+ ++ + K + A A +P KRRNS+ S+E+ L +D++DV I V +L+LHHHI +G A+ WPI +F IF+D RA + +V +F+SY+++TAQLE DCV+ SL YIER+L ETAG+LR+ R NWRS+ L G+ILASK+WDDLSMW+ DF++VGR +L+RINELEVA+LQ LQYNVRV SS FA Y+FR+R+WC+LL
Sbjct: 78 QELREFCRQVEAAVARKQAMADA--PYEEPSTWVNYVGGSLNTRSRVHKPHHTIQTTPYLSQSVVTSYIKGGGAASLAAAANASVPFKRRNSTGSLEVRLTVDNMDVAVTIAXXXXXXXXXXXXXXAGMVXXXXXXXXXXXXXXVIALILHHHILQGSALDWPIAKQFAIFDDS---------------VMSFRACRNGEMPTFEQVHDFFSYIYRTAQLECDCVVTSLFYIERLLMETAGELRMCRTNWRSITLSGMILASKVWDDLSMWSVDFARVGRLTLKRINELEVAVLQALQYNVRVDSSNFARYFFRLRNWCLLLNA 384
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A5D6XQX6_9STRA (WW domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQX6_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.970e-32 Identity = 85/222 (38.29%), Postives = 126/222 (56.76%), Query Frame = 1
Query: 658 AKLPLKRRNSSTSVELCLF--MDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVL---------EFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGV 1287
A+ PL+RR++STS M+ D MI + VL H+ E A +D +F++F E + F R GG+ G V+ F +VF AQ+E +C+IMSLVY+ER+L T+G L++ NWR+++ C +++ASK+WDDLSM N DFSK+ SL+ INELE+A L ++YNVRV++ +A YYF +R C +G+
Sbjct: 395 ARQPLRRRSNSTSTIYVRMGTMNAPDQDCMITCVATVLRAHMVEAAAAPIAVDAKFDVFVGR--RERAQRAEADARVFALERRP--RGGDAGPAVVIVPPLKEIGAFIKHVFSRAQMESECIIMSLVYVERLLKATSGALQLRGSNWRAILFCSMVMASKVWDDLSMCNADFSKIWPELSLKEINELELAYLSAVEYNVRVSAVSYAKYYFHLRSMCASMGL 612
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: K3X1X9_GLOUD (WW domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1X9_GLOUD) HSP 1 Score: 142 bits (359), Expect = 5.750e-32 Identity = 87/225 (38.67%), Postives = 126/225 (56.00%), Query Frame = 1
Query: 667 PLKRRNSSTSVELCLF--MDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGME----VGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVG-RCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 1320
PL+RR++STS M+ D IK + VL H+ E ID +F++F E S G GG T A S+ + +VF AQ+E +C+IMSL+Y+ER+L T+G L++ NWRS++ C +++ASK+WDDLSM N DFSK+ SL+ INELE+A L ++YNVRV++ +A YYF +R C +G+ +D S P
Sbjct: 418 PLRRRSNSTSTIYVRMGTMNAPDQDCTIKCVATVLRAHMVEAAESPIEIDSKFDVFISRRERERRALAASLGVGGMYAVTNTNALPSSI-PSLKEIAAVIKHVFSRAQMESECIIMSLIYVERLLKATSGSLQLLGYNWRSILFCSMVMASKVWDDLSMCNADFSKIWPELSLKEINELELAYLSAVEYNVRVSAVSYAKYYFHLRSMCASMGMLAA--FDESAP 639
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A7S2LBG9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBG9_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.060e-31 Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 934 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRC----SLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASP 1317
V +FY +F +Q+E +C+I+SL+Y+ER++ ++ G+LR NWRS++ ++LASK+WDDLSMWNCDFSK+G C SL+R NELE+A+L LQY V+V +S +A YYF +R G+ L +P
Sbjct: 157 VTDFYRSIFVRSQMEIECIIISLIYVERLIKKSKGELRPQSDNWRSILFSCMVLASKVWDDLSMWNCDFSKIGPCGMTFSLQRTNELEIALLSALQYRVKVGASEYAKYYFLLRGMLCRSGLANDDLTRLNP 288
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A485KJY8_9STRA (Aste57867_8288 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJY8_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.460e-31 Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 1
Query: 676 RRNSSTSVELCL-FMDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGK-LRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKV--GRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 1320
R NS+ S+ + + M+ D + + VLH HI E A P+D RF F P P A +L+F + V++TAQ+E +C+IMSL+Y+ER+L TAG+ L++ NW +++ C +++ASK+WDDLSM N DFSK+ G LRRIN LE+ L ++YNVRV+++ +A YYF +R L + +D + P
Sbjct: 188 RSNSTNSIFVRMGTMNKPDQTSTFFCVATVLHDHILEAQAHPMPLDARFQGFQTPSSSAAALPPP-------SVDA-----------ILQFMTQVYRTAQMESECIIMSLIYVERLLQATAGRGLQLRGSNWPAIVFCSMVMASKVWDDLSMCNADFSKIFHGMFPLRRINALELLYLDAVEYNVRVSAASYAKYYFHLRSIYKSLKLGQLSAFDTNTP 388
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA) HSP 1 Score: 136 bits (342), Expect = 9.130e-31 Identity = 80/214 (37.38%), Postives = 122/214 (57.01%), Query Frame = 1
Query: 664 LPLKRRNSSTSVELCLFMDDLDVQAMIKVTSLVLHHHIAEGC--AMSWPIDPRFNIFND---PPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKV-GRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGV 1287
LP+ RRNS++++ + M D A IK V+ H+ E A P+ +F D P M V S ++ F+ ++ +Q+E +C+IMSL+Y+ERV T G +++ NW+S+++ +I+ASK+WDDLSMWN DFS+V +LRRINELE+A+L VL Y V+VA+S +A YYF +R +C+ LG+
Sbjct: 185 LPMNRRNSTSTLYVGSTMSRPDKDATIKCVCTVIRAHMLEAVEDADDTTPHPKAAVFLDHEAPEDMPVPSL----------------------QELVTFFREIYVKSQMEIECIIMSLIYLERVTKVTKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAKYYFHIRSYCVRLGL 376
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A024UFJ0_9STRA (WW domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFJ0_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.630e-30 Identity = 81/235 (34.47%), Postives = 128/235 (54.47%), Query Frame = 1
Query: 631 HLNSG-ATRPAKLPLKRRNSSTSVELCL-FMDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGK-LRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKV--GRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 1320
H +SG P + R NS+ S+ + L M+ D + + VLH HI E + P++PRF F P F +++ F + +++TAQ+E +C+IM L+Y+ER+L T GK L++ NW++++ C +++ASK+WDDLSM N DFSK+ G LRRIN LE+ L ++YNVRV+++ +A YYF +R L + G +D++ P
Sbjct: 178 HQSSGECVVPPQPQRMRSNSTNSIFVRLGTMNKPDQTSTFFCVATVLHGHILEATSAHVPMEPRFLGFEAPSSSMS----------FSVPSVD---------KIVSFMTQIYRTAQMESECIIMGLIYVERLLQATVGKGLQLTPTNWQAIVFCSMLMASKVWDDLSMCNADFSKIFHGHFPLRRINALELLYLDCVEYNVRVSAASYAKYYFHLRSIYKSLKLGNLGAFDSNTP 393
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A6G0XV53_9STRA (WW domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV53_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.550e-30 Identity = 77/219 (35.16%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 676 RRNSSTSVELCL-FMDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGK-LRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKV--GRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVETPGLYDASPP 1320
R NS+ S+ + + M+ D + + VLH HI E A P+D RF F P + + +G +++F + +++TAQ+E +C+IM L+Y+ER+L TAGK L++ NW +++ C +++ASK+WDDLSM N DFSK+ G+ LRRIN LE+ L ++YNVRV+++ +A YYF +R L + +D++ P
Sbjct: 184 RSNSTNSIFVRMGTMNKPDQTSTFFCVATVLHGHIVEAQANPLPLDQRFAGFQSPQA--------------YSSVMPTVDG------IVQFMTQIYRTAQMESECIIMGLIYVERLLQATAGKGLQLRTSNWEAIVFCSMVMASKVWDDLSMCNADFSKIFQGQFPLRRINALELLYLSAVEYNVRVSAASYAKYYFHLRSIYKSLKLGQLSAFDSNTP 382
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Match: A0A7S1UIR8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIR8_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.680e-30 Identity = 90/263 (34.22%), Postives = 133/263 (50.57%), Query Frame = 1
Query: 517 WTNFIGGTLNSVSR-----EHKPHYMFRTVPYMDMEILRKHNKHLNSGATRPAKLPLKRRNSSTSVELCLFMDDLDVQAMIKVTSLVLHHHIAEGCAMSWPIDPRFNIFNDPPGMEVGSKGPGGGGGFHETRAAGSNGGEGGWRVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFRKNWRSVILCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAILQVLQYNVRVASSLFASYYFRMRHWCILLGVE 1290
W N+IGG L++ + EH + V + + K + A + + R+S+ S+ ++ + V+ MI + LH + W F F+D + SKG A S + FY YVF TAQLE+ C+I S +YIER L T+G+L + NWRSV+L GL LASKIWDD SMWN DFS VG +L +IN LE+AIL +Q++V + +L+ YY+ +R+ I L ++
Sbjct: 26 WHNYIGGRLSAAAAAGKNAEHSQPFAKLHVADLIANYVDKCEQEEREAAA-VSGTHMTTRHSTGSLYHSFTIEKMMVEPMIMAAIIALHSRMKTASERDWRQSADFTFFDDND-ISPESKG---------VPVAPSP-----ELMYTFYKYVFDTAQLEEMCIITSTIYIERALHMTSGRLLLTSSNWRSVLLAGLALASKIWDDFSMWNADFSDVGNITLTKINSLELAILSAIQWDVHIPRNLYTHYYYALRNLVIKLDLK 272 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1055.762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1055.762.1 >prot_S-firma_F_contig1055.762.1 ID=prot_S-firma_F_contig1055.762.1|Name=mRNA_S-firma_F_contig1055.762.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=641bp WIQDRVVCSAGWDAKRWRGAETDSADTHTTHTAPYLQLQAPFVVTSMFPAback to top mRNA from alignment at S-firma_F_contig1055:15766..26035+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1055.762.1 ID=mRNA_S-firma_F_contig1055.762.1|Name=mRNA_S-firma_F_contig1055.762.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=10270bp|location=Sequence derived from alignment at S-firma_F_contig1055:15766..26035+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1055:15766..26035+ >mRNA_S-firma_F_contig1055.762.1 ID=mRNA_S-firma_F_contig1055.762.1|Name=mRNA_S-firma_F_contig1055.762.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3846bp|location=Sequence derived from alignment at S-firma_F_contig1055:15766..26035+ (Sphaerotrichia firma ET2_F female)back to top |