mRNA_S-firma_F_contig10531.741.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 1.540e-192 Identity = 270/353 (76.49%), Postives = 289/353 (81.87%), Query Frame = 3
Query: 3 DPAVDYRKEFPDFHYHMFRPNNRSFSRSASSAAESKRAWEGAPPPIKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQ-FCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRSPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDPGDSKMVKAANIPHWDYRHGFR-----QPKKKKRIADASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGYSG-ARD 1040
DP +YR EFP F MFR + R R W GAP P+KTIRCLD WSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELH+ALDF+PK G FCLF+IQFSP NTHILGGGSDNHVYLYSLERKERVARI+AHDDDVNAVAFAD+GSQVVLSGGDD VIK+WDLRSPDAAVGGLCGHQAG+TCITAKGDG HFIS +R+MLDP D KM KAA+IPHWDYRH +P K KR +D SVKTFHGHKVLQTLIRCYFSP HTTGQRFVMSGS+DG VCIWDILTG+MV+SLSWH+ NTRDVSWHPHLPLIASFSWDAAVGLW YSG ARD
Sbjct: 258 DPEENYRDEFPGFTRGMFRSSRR-------------RLWHGAPKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARISAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMTMSLPALRPIKSKRASDESVKTFHGHKVLQTLIRCYFSPTHTTGQRFVMSGSADGSVCIWDILTGNMVDSLSWHTGNTRDVSWHPHLPLIASFSWDAAVGLWSYSGGARD 597
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 2.030e-155 Identity = 231/333 (69.37%), Postives = 251/333 (75.38%), Query Frame = 3
Query: 3 DPAVDYRKEFPDFHYHMFRPNNRSFSRSASSAAESKRAWEGAPPPIKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQ-FCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRSPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDPGDSKMVKAAN----------------------IPHWDYRH---GFR--QPKKKKRIADASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMV 917
DP +YR EFPDF YHMFR + R R W GAP P+KTIRCLD WSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELH+ALDF+PK G FCLF+IQFSP NTHILGGGSD HVYLYSLERKERV+RI AHD+DVNAVAFAD+GSQVVLSGGDD VIK+WDLRSPDAAVGGLCGHQAG+TCITAKGDG HFIS +R+MLDP D KM KA + + WDYRH F +PKK KR +D SVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGS+DG VCIWD+LTG+MV
Sbjct: 322 DPEENYRDEFPDFTYHMFRSSRR-------------RLWHGAPKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDKHVYLYSLERKERVSRIRAHDNDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKATHTSLWCPSYFVGITCLCVCVVVYVHCWDYRHMPMSFTALRPKKGKRTSDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDVLTGNMV 641
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: A0A835ZBR0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR0_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.190e-93 Identity = 175/408 (42.89%), Postives = 213/408 (52.21%), Query Frame = 3
Query: 114 AWEGAPPPIKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFR-PKRG--QFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRSPDAA-VGGLCGHQ--------------------------------AGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDPGDSKMVKAANIPHWDYRHGFRQPKKKKRIA--------------------DASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTG------------------------------------------------DMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGY 1025
A +G P P KTI C D+ W+V+ TDFSPD++WLAYSSWS YVHLCN +GDYE+HEALDF+ P+RG FCLFSI+FSP NTH+L GGSD+ V+LY+LERKE VAR+ AH DDVNAV + D G V+LSG DD I+VWD+RS VG LCGH AG+TC++A+ DG S R M PG + WDYR P + ++ D S+KTF GH+VLQTLIRC FSP HTTGQR+++SGS G V +WD+LTG + E H D RDVSWHPHLPL+AS SWD +VGLW Y
Sbjct: 296 AEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDI--PAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTY 701
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: C3XUD8_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XUD8_BRAFL) HSP 1 Score: 294 bits (753), Expect = 3.820e-93 Identity = 153/306 (50.00%), Postives = 188/306 (61.44%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLR-----SPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDP-GDSKMVKAANIPHWDYRHGFRQPKKKK-----RIA-DASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLW 1019
+TIR D+ WSV+ T FSPD +L YSSWS +HLCN GDYE H ALD P +FC+FS+ FS DN +LGG +D +Y+Y ER ER RI +H+DDVNAVA+AD SQ++ SGGDD + +VWD R SP+A VG L GH G+T I +K D H IS IRK P G +A +WDYR QP K+ R+A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG S G V ++D+LTG +VE L H RDVSWHP+ P I S WD VGLW
Sbjct: 50 FRTIRARDVGWSVLDTAFSPDGCYLIYSSWSDAIHLCNIYGDYETHIALDLNPSERRFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENSPNA-VGTLAGHSDGITFIDSKADARHLISNSKDQTIKLWDIRKFSPPEGLEASRRAVANQNWDYRW---QPVPKRGRYNARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGQIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGIVGLW 351
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: UPI0013905153 (DDB1- and CUL4-associated factor 11 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013905153) HSP 1 Score: 293 bits (749), Expect = 4.270e-90 Identity = 150/307 (48.86%), Postives = 189/307 (61.56%), Query Frame = 3
Query: 144 TIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRSPDAA----VGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLD-PGDSKMVKAANIPHWDYR--HGFRQPKKKKRIA-DASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGYSGARD 1040
+I+ DI WS+I T FSPD+++ YSSWS YVHLCN GDY H ALD RP+ +FC FSI FS DNT IL GG+D +Y+Y ++R RI H+DD+ +V FAD GSQ+ S GDD + KVWD R+ + VG L GH G+TCI +KGDG H I+ IRK D G +A WDYR R+ K + +A D S+ T+ GH VL TLIRCYFSP HTTGQR++ +G S G V I+DILTG++ L+ H+ RDVSWHP+ I S SWD VGLW Y + D
Sbjct: 210 SIQARDIGWSIIDTAFSPDQQYFIYSSWSDYVHLCNIYGDYNTHVALDLRPEVSRFCAFSITFSHDNTEILAGGNDACLYIYDRGSEQRTLRIEGHEDDLGSVRFADPGSQIFYSAGDDGLCKVWDRRTLNETNPCPVGVLSGHADGITCIASKGDGRHLITNSKDQTIKLWDIRKFSDNDGIVATKRAVASQRWDYRWQKAPRKSLKPRTLAGDVSLMTYRGHSVLNTLIRCYFSPDHTTGQRYIYTGCSTGSVVIYDILTGEVKARLTGHNSCVRDVSWHPYENKIVSSSWDGMVGLWQYECSDD 516
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: A0A6P4ZES3_BRABE (DDB1- and CUL4-associated factor 11-like isoform X1 n=23 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZES3_BRABE) HSP 1 Score: 291 bits (745), Expect = 4.380e-89 Identity = 150/307 (48.86%), Postives = 188/307 (61.24%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLR-----SPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDP-GDSKMVKAANIPHWDYRHGFRQPKKKK------RIA-DASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLW 1019
+TIR D+ WSV+ T FSPD +L YSSWS +HLCN GDYE H ALD P +FC+FS+ FS DN +LGG +D +Y+Y ER ER RI +H+DDVNAVA+AD SQ++ SGGDD + +VWD R +P+A VG L GH G+T I +K D H IS +RK P G +A +WDYR QP K+ R+A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG S G V ++D+LTG +VE L H RDVSWHP+ P I S WD +GLW
Sbjct: 236 FRTIRARDVGWSVLDTAFSPDGCYLIYSSWSDAIHLCNIYGDYETHIALDLNPSERRFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENNPNA-VGTLAGHSDGITFIDSKSDARHLISNSKDQTIKLWDVRKFSPPEGLEASRRAVANQNWDYRW---QPVPKRVRTSSARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGKIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGVLGLW 538
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: A0A8B8EXN5_CRAVI (DDB1- and CUL4-associated factor 11-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EXN5_CRAVI) HSP 1 Score: 287 bits (734), Expect = 7.860e-88 Identity = 148/319 (46.39%), Postives = 192/319 (60.19%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLR----SPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKM--LDPGD------SKMVKAANIPHWDYRHGF---RQPKKKKRIA-DASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGYSGARDLR 1046
+KTIR D+ WS++ T FSPD +L YSSWS +HLCN GDY+ H L P+ F +FS+ FS DNT ILGG +D +Y+Y E R +I+AHDDDVNAVAFAD SQ++ SGGDD ++K+WD R S VG GH G+T I +KGD + IS +RK LD + KA +WDYR G KKKK+IA D+S+ T+ GH +LQTLIRC+FSP HTTGQR++ +G + G + I+D+LTG +V L H+ TRDVSWHP+ +I + SWD V W Y D R
Sbjct: 190 LKTIRARDVGWSILDTAFSPDGNYLIYSSWSDAIHLCNIHGDYDTHIPLQLMPRSHSFAIFSLTFSSDNTEILGGSNDGCLYVYDRESNRRTLQIDAHDDDVNAVAFADNSSQILFSGGDDGLVKIWDRRTLKESSPEPVGTFGGHFDGITYIDSKGDARYLISNSKDQTIKLWDVRKFSALDGVEVTWSKGKATKKAVAKQNWDYRWGQVPRSVSKKKKKIAGDSSIMTYRGHSILQTLIRCHFSPEHTTGQRYIYTGCATGDLIIYDLLTGKVVSRLKGHTSCTRDVSWHPYENIIMTSSWDGTVKKWQYRHQEDYR 508
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: UPI000A2A4C56 (DDB1- and CUL4-associated factor 11 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4C56) HSP 1 Score: 286 bits (731), Expect = 1.230e-87 Identity = 143/313 (45.69%), Postives = 189/313 (60.38%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDD--VNAVAFADAGSQVVLSGGDDSVIKVWDLR----SPDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKML-DPGDSKMVKAANIPHWDYRHGFRQPKKKKRI----ADASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGYSGARDL 1043
++I+ DI WS+I T +SPD+ +L YSSWS Y+HLCN GDY H ALD +P+ +FC FSI+FS DN I+ G +D+ +Y+Y E +R+ RI HD D VNAV FAD+ +Q++ SG DD + KVWD R S VG GH G+T I +K D HH I+ +RK + +A + HWDYR P+K R D+S+ T+ GH V TLIRCYFSPAHTTGQR++ +GSS G V I+D+LTG++ +L+ H + RDVSWHP+ I S SWD V LW Y DL
Sbjct: 208 FRSIKARDIGWSIIDTAYSPDQNYLIYSSWSDYIHLCNIYGDYNTHIALDLKPRSRRFCAFSIEFSQDNKEIIAGSNDSCIYIYDRESDQRILRILGHDQDYDVNAVTFADSSAQILFSGSDDGLCKVWDRRMLNESHPLPVGVFAGHSDGLTFIHSKNDSHHLITNSKDQTIKLWDLRKFSSEEAVQNTQRAVDSQHWDYRWQ-NVPRKILRTKTLPGDSSIMTYRGHVVRNTLIRCYFSPAHTTGQRYIYTGSSSGNVVIYDVLTGEVKANLTGHRECVRDVSWHPYDNKIVSTSWDGTVALWQYKNRNDL 519
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: UPI00077A1D94 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1D94) HSP 1 Score: 286 bits (731), Expect = 1.300e-87 Identity = 143/307 (46.58%), Postives = 183/307 (59.61%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRSPDAAV----GGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKMLDP-GDSKMVKAANIPHWDYRHGFRQPKKKKRI------ADASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGY 1025
+ IR D+ WS+I TD+SPD+++L YSSWS YVHLCN GDYE H AL P +FC FSI+FS DN IL G +D+ +Y+Y ++ RI AH+D +N V FAD SQ++LS DD + KVWD R D +V G GH G+T I +GDG H I+ +RK D G + +A WDYR QP +K + D+S+ T+ GH VL TLIRCYFSP HTTGQR++ SG S G + I+D LTG +V L+ H RDVSWHP+ P I S SWD +GLW Y
Sbjct: 201 FRDIRARDVGWSIIDTDYSPDQQYLIYSSWSNYVHLCNIYGDYETHSALCLSPMESRFCAFSIKFSHDNKEILAGANDSCLYVYDRGSDQQTLRILAHEDGINCVKFADTSSQILLSAADDGLCKVWDRRVLDESVHSPVGVFAGHADGITYIDPRGDGRHLITNSKDQTIKLWDMRKFSDSEGVTATKQAVAKQRWDYRW---QPVPRKSLRQAKLPGDSSLMTYRGHSVLHTLIRCYFSPLHTTGQRYIYSGCSTGSIVIYDALTGKVVSRLAGHGSTVRDVSWHPYQPEIVSTSWDGVLGLWSY 504
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Match: UPI0014591523 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014591523) HSP 1 Score: 285 bits (728), Expect = 5.520e-87 Identity = 142/304 (46.71%), Postives = 185/304 (60.86%), Query Frame = 3
Query: 138 IKTIRCLDIQWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHEALDFRPKRGQFCLFSIQFSPDNTHILGGGSDNHVYLYSLERKERVARINAHDDDVNAVAFADAGSQVVLSGGDDSVIKVWDLRS----PDAAVGGLCGHQAGVTCITAKGDGHHFISXXXXXXXXXXXIRKML-DPGDSKMVKAANIPHWDYR---HGFRQPKKKKRIADASVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSSDGRVCIWDILTGDMVESLSWHSDNTRDVSWHPHLPLIASFSWDAAVGLWGY 1025
+KTIR D+ WS++ T FSPD ++ YSSWS +HLCN +G+Y+ H AL P FC+FS+ FS DN ILGG +D +Y+Y E +R RI AH+DDVNAVAFAD+ SQ++ SGGDD ++KVWD R+ VG L GH G+T I +KGD +S +R + G KA WDYR R KKK D+S+ T+ GH VL TLIRC+FSP TTGQR+V SG + G V ++D+LTG +V LS H+ RDVSWHP+ +I S SWD++V W Y
Sbjct: 195 LKTIRAKDVGWSILDTAFSPDGNYVIYSSWSDCIHLCNIQGEYDTHNALHLFPGEHSFCIFSLTFSYDNREILGGANDGCLYVYDRESNQRTLRIEAHEDDVNAVAFADSSSQILFSGGDDGLLKVWDRRTLREENPIPVGTLAGHSDGITYIDSKGDARFLLSNCKDQSMKLWDVRMFSSEEGIQSTKKAVTKQKWDYRWQQFPKRASKKKVLAGDSSIMTYRGHSVLNTLIRCHFSPEMTTGQRYVYSGCASGTVVVYDLLTGKIVARLSGHNTCVRDVSWHPYENIIMSTSWDSSVAKWTY 498 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10531.741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10531.741.1 >prot_S-firma_F_contig10531.741.1 ID=prot_S-firma_F_contig10531.741.1|Name=mRNA_S-firma_F_contig10531.741.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=333bp MFRPNNRSFSRSASSAAESKRAWEGAPPPIKTIRCLDIQWSVISTDFSPDback to top mRNA from alignment at S-firma_F_contig10531:227..5081- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10531.741.1 ID=mRNA_S-firma_F_contig10531.741.1|Name=mRNA_S-firma_F_contig10531.741.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4855bp|location=Sequence derived from alignment at S-firma_F_contig10531:227..5081- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10531:227..5081- >mRNA_S-firma_F_contig10531.741.1 ID=mRNA_S-firma_F_contig10531.741.1|Name=mRNA_S-firma_F_contig10531.741.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1998bp|location=Sequence derived from alignment at S-firma_F_contig10531:227..5081- (Sphaerotrichia firma ET2_F female)back to top |