mRNA_S-firma_F_contig10520.732.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A6V2EN90_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN90_9STRA) HSP 1 Score: 105 bits (262), Expect = 7.790e-26 Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 4 IVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVTV 327
I +E TGPY G T+ LKP+ + P IGRS+GK F +G+SLPDD EVST+HGKFE+K K F D STNGS GK LE E L G +++VG +T+ +
Sbjct: 124 IRVEIITGPYNGNTYDLKPKI-RGPCFIGRSSGKKFRERGISLPDDPEVSTSHGKFEVKKKKFYFVDTGSTNGSICEGKDLEPNEPLELKDGMVIKVGVSMLRITLAM 230
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A5A8CYM7_CAFRO (FHA domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYM7_CAFRO) HSP 1 Score: 100 bits (250), Expect = 6.200e-24 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 1 DIVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTV 321
++ + +GP+AG +L+PRQ + K GRSTG+ F G+SLP+D EVSTTH K E + G V TD +STNGS L+G + E PL IL VG + H+T+
Sbjct: 135 NVRAKVMSGPHAGIDTVLRPRQRRLVPKFGRSTGQQFVKNGISLPEDDEVSTTHAKLEARGGAVWVTDLDSTNGSILDGASMPPGEPLPLPHQCILRVGQSDIHLTM 241
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7S1FRI1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRI1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.220e-23 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 DIVLEATTGPYA-GQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLF-TDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVT 318
D+ + GPY G+T++LKPR +AP +GRST K F +G+SLP D E+STTHGKFE+K+ VL+ TD STNGS + +E + L G +L++G GN H+T
Sbjct: 102 DLEITIRGGPYDDGKTYLLKPRF-RAPCFLGRSTSKKFREKGMSLPRDFEMSTTHGKFEVKNNGVLYYTDLGSTNGSFHENRQVEPEVSLELKDGMVLQIGAGNLHIT 208
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7S2UEV6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEV6_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.270e-23 Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 DIVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTV 321
+ ++ GPYAG +++LKPR + +GRS GK F +G+SLP D EVSTTHGKFEMK GK+ F D STNG+ NG+ ++ L G IL++G +++
Sbjct: 174 SVKVDLMDGPYAGNSFVLKPRARQI-CYVGRSAGKKFRDKGMSLPKDPEVSTTHGKFEMKAGKIFFVDMGSTNGTLCNGQEIQPDVPLELTEGMILQIGAAKCMISL 279
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7S2EPN0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EPN0_TRICV) HSP 1 Score: 99.4 bits (246), Expect = 1.740e-23 Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 4 IVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVTV 327
I ++ GPY G ++ LKPR + P +GRS GK F +G+SLP D EVSTTHGKFE+K GK F D STNG+ K LE PL D LE+ G HV +T+
Sbjct: 123 IYVKVLGGPYEGSSYELKPRA-RTPCFVGRSAGKKFRDRGISLPKDGEVSTTHGKFEIKAGKAYFVDTGSTNGTVYQDKELEPN--APLELEDDLELIIGTTHVKITL 227
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: B7FXA3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXA3_PHATC) HSP 1 Score: 96.3 bits (238), Expect = 2.000e-22 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 10 LEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVT 324
+E G Y GQ++ LKP KAP +GRS GK FT++G+SL D EVSTTHGKFE+ + +V FTD STNG+++ G+ LE P+ G LE+ G + V+
Sbjct: 112 VEIVAGEYVGQSYELKPSS-KAPCMVGRSKGKKFTTRGISLAKDLEVSTTHGKFEIVNDQVCFTDTGSTNGTRIGGQELETDTPVPITDG--LEITCGQTILKVS 213
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A6U4CF63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CF63_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.620e-21 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 DIVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVTVVA 333
D+VL GP+ G+ + L+P G +GRSTGK + +GVSL +D E ST H K + GK++FTD STNGS +NG+P+E E P+ + +E+G G + V +VA
Sbjct: 124 DVVLAVQAGPHEGEEFRLQPSAGVC--YVGRSTGKRYREKGVSLSNDPEASTLHAKIRVLQGKIVFTDAGSTNGSTVNGEPVE--EGDPITLENGMELGIGGCLLRVALVA 230
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7R9WG63_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WG63_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.650e-20 Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 1 DIVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVTV 327
I ++ G Y G+ ++LKPR +AP +GRS GK F +G+SL D+EVSTTHGKFE+K GK F D STNG+ + LE PL D +E+ G VT+T+
Sbjct: 206 QIYVDVIGGSYKGKKYVLKPRP-RAPCFVGRSAGKKFRDRGMSLAKDSEVSTTHGKFEIKAGKAFFVDTGSTNGTLYLEEELEVN--APLELKDGMELLIGTTLVTITL 311
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7S4A7S8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7S8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.970e-20 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 4 IVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVT 318
+ + ATTGP+ G + K G A +GRS GK F +G+SLP D EVSTTH K E+K+ +++ D STNG+ ++G+P+E + PL G+ + G F V+
Sbjct: 93 VTMVATTGPHKGIAF--KMTVGAAACFVGRSGGKKFREKGISLPKDNEVSTTHAKIELKNDEIVLVDVGSTNGTSIDGEPIEEGKPHPLAAGNTVVFGASTFTVS 195
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Match: A0A7S4JX86_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JX86_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.120e-18 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 25 GPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVSTTHGKFEMKDGKVLFTDCESTNGSQLNGKPLEAREATPLNTGDILEVGGGNFHVTVTV 327
GPY G+T+ LKPR ++P +GRS GK F +G+SL D+EVSTTHGKFE+K GK F D STNG+ + LE +PL + +E+ G V +++
Sbjct: 137 GPYEGKTFNLKPRP-RSPCYVGRSAGKKFRERGMSLQKDSEVSTTHGKFEVKSGKAFFVDTGSTNGTLHMEQELEVN--SPLELHNDMEILIGATLVKISL 234 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10520.732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10520.732.1 >prot_S-firma_F_contig10520.732.1 ID=prot_S-firma_F_contig10520.732.1|Name=mRNA_S-firma_F_contig10520.732.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=112bp DIVLEATTGPYAGQTWILKPRQGKAPKKIGRSTGKHFTSQGVSLPDDAEVback to top mRNA from alignment at S-firma_F_contig10520:814..1149+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10520.732.1 ID=mRNA_S-firma_F_contig10520.732.1|Name=mRNA_S-firma_F_contig10520.732.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=336bp|location=Sequence derived from alignment at S-firma_F_contig10520:814..1149+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10520:814..1149+ >mRNA_S-firma_F_contig10520.732.1 ID=mRNA_S-firma_F_contig10520.732.1|Name=mRNA_S-firma_F_contig10520.732.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=672bp|location=Sequence derived from alignment at S-firma_F_contig10520:814..1149+ (Sphaerotrichia firma ET2_F female)back to top |