mRNA_S-firma_F_contig10502.710.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G2K5_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K5_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.720e-58 Identity = 148/393 (37.66%), Postives = 185/393 (47.07%), Query Frame = 1
Query: 127 MAMNNSEGREHIRGAE--ENVFNLVAHSTSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPE 1299
MA NN+EGRE + G + F+L W +WL+APLE AA++GD+TLA++LV AG A G+AVHAA+ G H GLA LL GAP DS G T LHVAA E ++EA+ VNPA+IIALL HGAAV+G+ +PL R V S RPT+EAL PL+ +DV+A VD++T+LH+LC A IP EIVDLLLR GA + Y +TPL L N+ +++KRVR LL NAPADRAWRRRGF+VLCRAFP R+ + G H AV PE
Sbjct: 1 MADNNTEGREKLPGRRWTSSTFSLKTPRPKK-WAEWLRAPLEAAAARGDQTLALELVGAGGASGSAVHAAVSGCHVGLAGSLLRTGAPVDGKDSQGCTALHVAA--------------------------------------------------------------------------------AERQLEAMXXXXXXXXXXXXXXXXXXXXXXXXX--XXVNPASIIALLGHGAAVDGNADETVNPLFRVVLSERPTVEALPPLVRHASDVDAHGVDDETALHRLCLKAMVIPNAPEIVDLLLRWGACKEITCYGLTPLGVLNAYNSMNTDNLKRVRDLLHNAPADRAWRRRGFLVLCRAFPDRMHQNV-----GNNTPTAHAAVAGEEPPE 305
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.670e-36 Identity = 130/393 (33.08%), Postives = 176/393 (44.78%), Query Frame = 1
Query: 133 MNNSEGREHIRGAEENVFNLVAHS-TSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSV---------------------MMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAAST---VNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPEAESVKR----VRRLLENAPADRAWRRRGFMVLCRAFPCRVRL 1224
M N R +RG EE +F+L A + T W +Q LE AA +G L +LV AGA GTAVHAA+RGGH + LLE GA S +D +G+TPL + + + +S L I A G++ +R +I+HG A ++ N G ALH A KVEA+DVL +AGA+ ++ + T L AA T AT+ LLKHG ADVNA V TS+ + A+ +VE+VDLLLR GADET + + + + PE + + VR+LL NAPADRAWRRR +VLCRA P +++L
Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHG-ADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGH--TVLHMAAITRTRTEAATLAVLLKHG-----------------------------------ADVNAQTVG-GTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL 354
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 122 bits (306), Expect = 7.280e-27 Identity = 120/364 (32.97%), Postives = 160/364 (43.96%), Query Frame = 1
Query: 319 VHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPL---------YRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPESRSSRRRMLDDPVA---SGCG---GGVG 1365
+H A G G LL GA + D+ G TPLH+A + V++LL P+ TSV + + + S L +AA +G VLR +++HG +N DG T+LH AAL +V AIDVL +AGA ++ TP DA +AL KHG+ +E +PL+ A + QG V IVD+LLR GADET + D Y LN + V+RVR LLENAP DRAWRRRGF+VLCRAF + R +L + + +G +T S + DD GCG GGVG
Sbjct: 42 LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPD---------TSVRYR-IWNRSYSVLDLAAQKGDACVLRAILQHG-VDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDC--TPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAG----------RQG--------------------------VTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNK---QDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKAR-RLRAASSNASSNGPRVRSLSTGARISGAGGELREDDDKGRRKQGCGLVGGGVG 351
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 117 bits (294), Expect = 4.210e-25 Identity = 118/349 (33.81%), Postives = 153/349 (43.84%), Query Frame = 1
Query: 364 LLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPL---------YRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPESRSSRRRMLDDPVA---SGC---GGGVG 1365
LL +GA + D+ G TPLH+A + V++LL P+ TSV + + + S L AA +G VLR +++HG +N DG T+LH AAL +V AIDVL +AGA ++ TP DA S +AL KHGA +E +PL+ A + QG V IVD+LLR GADET + D Y LN + E RVR LLENAPADRAWRRRG +VLCRAF + R +L + G + V S + DD GC GGGVG
Sbjct: 106 LLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPD---------TSVHYR-IWNRSYSVLDFAAQKGDACVLRAILQHG-VDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDC--TPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAG----------RQG--------------------------VTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLE---RVRDLLENAPADRAWRRRGLLVLCRAFWIKSR-RLRAASSSARGIGPRAMSVSIGVRVSVAGGELREDDDKGRRKQGCDLVGGGVG 400
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 116 bits (290), Expect = 5.090e-25 Identity = 121/389 (31.11%), Postives = 176/389 (45.24%), Query Frame = 1
Query: 157 HIRGAEENVFNLVAHS---TSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTD-SDGMTPLHVAARRNKPAIVRSLLLL--PPNSGD-----------------------------TDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHG-GAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCS-YDVTP--LYRLLELNNPEA-ESVKRVRRLLENAPADRAWRRRGFMVLCRA 1203
H AE +F LV+ S +S W +WL+ PL A + G+ L +L+ G R H G +T L+ GA + D ++G PLH A RR +V LL PN+ D T ++ A V++ + + + +A G++ V++ ++HG A A G TALH AAL+ + EA++VL +AGAD D + G+P D +PLL A +S + EAL L+ GAD N D + LH T P V+E+VDLLLR GA ET + + TP +++ L ++ P+A E LL APADRAWRRRG++V+ RA
Sbjct: 13 HALAAE--IFKLVSSSCGTSSEEWVEWLRVPLNCAVTSGNEDLVTRLLDTGGDVN-------RLDHLGRSTTLISAGADVNDRDPAEGCYPLHAAVRRGCDRVVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPN-AEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADV---ESLPGSPCYD----------------------------TPLLAAAESM--SNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQT--PGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRA 356
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 110 bits (274), Expect = 5.000e-22 Identity = 115/379 (30.34%), Postives = 159/379 (41.95%), Query Frame = 1
Query: 313 TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVE----------------AIDVLAQAGADIDA-------------------------------VPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPE----AESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVP 1296
TA+H A A + L KGA + +S G TPL +AA A ++LL ++ + A+S + A+ Q GY V+R+ I+H +N + DG+TALH A GKVE A L AGAD+ V K+ G AS + A I +L A + A ++PL A Q R + A + L+ GA V + T LH + A A + P E+VDLLLR GADET S + ++ L E AE V RVR+LL APADRAWRRRGF++L RA R++ R +G ++ P
Sbjct: 376 TALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEGNVAATQALLDAGADASSQSEGEASSALDCAVCQ------------GYTDVVRVKIEHE-IDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGR--LAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGS-PGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEP 738
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE) HSP 1 Score: 104 bits (260), Expect = 7.810e-21 Identity = 125/426 (29.34%), Postives = 180/426 (42.25%), Query Frame = 1
Query: 133 MNNSEGREHIRGAEENVFNLVAH-STSAAWGQWLQAPLELAASQGDRTLAVQLVAAGA---------------------------------AFG-TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALE--------------GKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAAN-SPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYD-VTPLYRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGAD 1257
M E R + G E +F LV+ + SA W +WL APL+ A ++GD+ A+ L+ AGA A G +A+H AI GGH LA + + GA D DG TPLH AA + V +LL + A + SPL+ A + + R ++++G A I + + G TALH AA+E + ID L +A D++A + + EGS +PL A ++ +M L +GA NA D T LH LC + + VDLLLR GADET + TP ++ +N + +R++L+ AP DRAWRR G +V+CRA P +V + R GG D
Sbjct: 1 MAAEEDRTALNGLERTLFKLVSEKAASAQWSKWLGAPLQHAVAEGDKDRALALLKAGADGRGNKEMVSTLLAKGGERTALHGALADVGLLDAKGRSALHYAIEGGHLQLAGDAVIGGADPKAKDIDGNTPLHFAAAYDDDKFVGTLLR---------RGAQVNAANNEGNLNERSPLFFAHDQAAMT--RTLLEYG-ADILSVDQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEARSVEFF---------------------------EGSQRFRGLTPLHLAAYHQKVSMAELS---RKGAVDNAKCDDGRTPLHMLCTNPKLNSW--DTVDLLLRWGADETAIDNEGYTPEALVVGRSNRS----RALRQMLDKAPEDRAWRRWGTLVMCRALPGKV-MTTSLRGRGGRD 377
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 2.420e-18 Identity = 114/392 (29.08%), Postives = 148/392 (37.76%), Query Frame = 1
Query: 127 MAMNNSEGREHIRGAEENVFNLVAHSTSA-AWGQWLQAPLELAASQGDRTLAVQLVAAGAAFG-TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSV---------------------MMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETR-CSYDVTPLYRLLELNNPEAE--SVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRL 1224
+A N +E ++G EE V +L+ + +WL APLE A ++GD LA +LV AGA G A+H A+R GH +A LLE GA + D TP + L + +S L AAS +++LR++I HG +N A G TALH AA + AIDVL AGADI A M PL + Q S V++V LLLR GADET C T R+ P E +R R LL APADRAWRRRG +VLC A+P R++L
Sbjct: 8 IAEKNKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHG-MEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQA--RNMSGSRPLX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGS-------VQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL 360
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 6.360e-17 Identity = 103/321 (32.09%), Postives = 151/321 (47.04%), Query Frame = 1
Query: 412 TPLHVAARRNKPAIVRSLL---LLPPNSGDTDQAAATSVMMKALTQKGL----SPLYIAASRGYLKVLRLMIKHGGAHINT-PNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNP-ATIIALLKHGAAVEGSPAAANSPLLRAVQSR--------------------RPTMEA-----LLPLIHQGADVNAFDV-DEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYD-VTPL---------YRLLELNNPEAESVKRVRRLLENAPADRA---WRRRGFMVLCRAFPCRVRLKL 1230
TP+H+AA+ + IV L+ + D + G+ + L+ A G++ V+ +IK +++ + G TALH AA ++ ID L +AGAD++A + VGT L AA + AT++ALL+HGA V+ + +PL AV++R R ++E LL L+ +GA VN D +T LH + + VD+LL+ GADET ++ TPL R L + E +R LL NAP DRA W RRGF VLCRAFP RV+ +L
Sbjct: 130 TPIHLAAKAGQAGIVGMLMDAGACADRCANEDASTWEQRYDPEYDWSGIRMTENALHFGAIGGHVDVIDEIIKRQPLTMSSVAESTGYTALHYAAKHSQLGVIDALVEAGADLEA-EGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLALLGRGAHVNTKGASDGNTPLHLAAEKSFRVK-----VDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDA--IRTLLVNAPKDRANRAWSRRGFFVLCRAFPERVQQQL 442
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5K8N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N6_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 1.430e-16 Identity = 106/371 (28.57%), Postives = 152/371 (40.97%), Query Frame = 1
Query: 238 PLELAASQGDRTLAVQLVAAGAA----FG-----TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAA-LEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVV-EIVDLLLRLGADETRCSYDVTPLYRLLELNN--------------PEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLK----LPPRADGGADSG 1263
PL A S + L+AAGA FG +H A GH G+ T LL GA D+ G PLH A ++ A +LL+ + +++ PL +AA +G + ++ +++KHG + + G TALH AA A+ L AGA+I+ + G+PL H AA + ++ +SP E +L L+ +GA VN V T+ L + P + +VDLLLR G D+T D LLEL+ + + + R R LL A DRAWRRR V+ RA RV + R GG D G
Sbjct: 35 PLFEAVSDEQEQIVADLLAAGACPNARFGGEEGYAPLHVASSRGHVGILTTLLSFGAHRDAVDNRGARPLHHAIAEDRVAATEALLVAGALGATPEDSSS------------FRPLVLAACKGSIDIINVLLKHGVDVNSRDDVVGATALHAAANCASGASAVHALVDAGAEINV--QRKDGGSPL-----------------HYAAASRASSSPSSPF-----------ETILALLQRGASVN--QVHSGTAQTPLLLACQHRPRGLGSVVDLLLRWGGDDTVVGGDGRTASELLELDQHHHATETEHHQCHLEQDDEIGRARTLLSRAKEDRAWRRRCLPVMLRAHQQRVCTAPSGDIEARRRGGRDHG 361 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10502.710.1 >prot_S-firma_F_contig10502.710.1 ID=prot_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=413bp MAMNNSEGREHIRGAEENVFNLVAHSTSAAWGQWLQAPLELAASQGDRTLback to top mRNA from alignment at S-firma_F_contig10502:2246..4342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10502.710.1 ID=mRNA_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2097bp|location=Sequence derived from alignment at S-firma_F_contig10502:2246..4342+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10502:2246..4342+ >mRNA_S-firma_F_contig10502.710.1 ID=mRNA_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2478bp|location=Sequence derived from alignment at S-firma_F_contig10502:2246..4342+ (Sphaerotrichia firma ET2_F female)back to top |