mRNA_S-firma_F_contig10502.710.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10502.710.1
Unique NamemRNA_S-firma_F_contig10502.710.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G2K5_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K5_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 3.720e-58
Identity = 148/393 (37.66%), Postives = 185/393 (47.07%), Query Frame = 1
Query:  127 MAMNNSEGREHIRGAE--ENVFNLVAHSTSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPE 1299
            MA NN+EGRE + G     + F+L        W +WL+APLE AA++GD+TLA++LV AG A G+AVHAA+ G H GLA  LL  GAP    DS G T LHVAA                                                                                 E ++EA+                             VNPA+IIALL HGAAV+G+     +PL R V S RPT+EAL PL+   +DV+A  VD++T+LH+LC  A  IP   EIVDLLLR GA +    Y +TPL  L   N+   +++KRVR LL NAPADRAWRRRGF+VLCRAFP R+   +     G      H AV     PE
Sbjct:    1 MADNNTEGREKLPGRRWTSSTFSLKTPRPKK-WAEWLRAPLEAAAARGDQTLALELVGAGGASGSAVHAAVSGCHVGLAGSLLRTGAPVDGKDSQGCTALHVAA--------------------------------------------------------------------------------AERQLEAMXXXXXXXXXXXXXXXXXXXXXXXXX--XXVNPASIIALLGHGAAVDGNADETVNPLFRVVLSERPTVEALPPLVRHASDVDAHGVDDETALHRLCLKAMVIPNAPEIVDLLLRWGACKEITCYGLTPLGVLNAYNSMNTDNLKRVRDLLHNAPADRAWRRRGFLVLCRAFPDRMHQNV-----GNNTPTAHAAVAGEEPPE 305          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.670e-36
Identity = 130/393 (33.08%), Postives = 176/393 (44.78%), Query Frame = 1
Query:  133 MNNSEGREHIRGAEENVFNLVAHS-TSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSV---------------------MMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAAST---VNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPEAESVKR----VRRLLENAPADRAWRRRGFMVLCRAFPCRVRL 1224
            M N   R  +RG EE +F+L A + T   W   +Q  LE AA +G   L  +LV AGA  GTAVHAA+RGGH  +   LLE GA  S +D +G+TPL                                                      + +    + +S L I A  G++  +R +I+HG A ++  N  G  ALH A    KVEA+DVL +AGA+  ++    +  T L  AA T      AT+  LLKHG                                   ADVNA  V   TS+ +  A+      +VE+VDLLLR GADET  + +       + +  PE + +      VR+LL NAPADRAWRRR  +VLCRA P +++L
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHG-ADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGH--TVLHMAAITRTRTEAATLAVLLKHG-----------------------------------ADVNAQTVG-GTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL 354          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 7.280e-27
Identity = 120/364 (32.97%), Postives = 160/364 (43.96%), Query Frame = 1
Query:  319 VHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPL---------YRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPESRSSRRRMLDDPVA---SGCG---GGVG 1365
            +H A   G  G    LL  GA  +  D+ G TPLH+A      + V++LL   P+         TSV  + +  +  S L +AA +G   VLR +++HG   +N    DG T+LH AAL  +V AIDVL +AGA ++         TP  DA         +AL KHG+ +E       +PL+ A +              QG                          V  IVD+LLR GADET  + D             Y    LN    + V+RVR LLENAP DRAWRRRGF+VLCRAF  + R +L   +   + +G      +T    S +      DD       GCG   GGVG
Sbjct:   42 LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPD---------TSVRYR-IWNRSYSVLDLAAQKGDACVLRAILQHG-VDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDC--TPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAG----------RQG--------------------------VTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNK---QDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKAR-RLRAASSNASSNGPRVRSLSTGARISGAGGELREDDDKGRRKQGCGLVGGGVG 351          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 4.210e-25
Identity = 118/349 (33.81%), Postives = 153/349 (43.84%), Query Frame = 1
Query:  364 LLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPL---------YRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPESRSSRRRMLDDPVA---SGC---GGGVG 1365
            LL +GA  +  D+ G TPLH+A      + V++LL   P+         TSV  + +  +  S L  AA +G   VLR +++HG   +N    DG T+LH AAL  +V AIDVL +AGA ++         TP  DA S       +AL KHGA +E       +PL+ A +              QG                          V  IVD+LLR GADET  + D             Y    LN  + E   RVR LLENAPADRAWRRRG +VLCRAF  + R +L   +      G      +  V  S +      DD       GC   GGGVG
Sbjct:  106 LLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPD---------TSVHYR-IWNRSYSVLDFAAQKGDACVLRAILQHG-VDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDC--TPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAG----------RQG--------------------------VTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLE---RVRDLLENAPADRAWRRRGLLVLCRAFWIKSR-RLRAASSSARGIGPRAMSVSIGVRVSVAGGELREDDDKGRRKQGCDLVGGGVG 400          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.090e-25
Identity = 121/389 (31.11%), Postives = 176/389 (45.24%), Query Frame = 1
Query:  157 HIRGAEENVFNLVAHS---TSAAWGQWLQAPLELAASQGDRTLAVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTD-SDGMTPLHVAARRNKPAIVRSLLLL--PPNSGD-----------------------------TDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHG-GAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCS-YDVTP--LYRLLELNNPEA-ESVKRVRRLLENAPADRAWRRRGFMVLCRA 1203
            H   AE  +F LV+ S   +S  W +WL+ PL  A + G+  L  +L+  G           R  H G +T L+  GA  +  D ++G  PLH A RR    +V  LL     PN+ D                             T ++ A  V++ +      + + +A   G++ V++  ++HG  A      A G TALH AAL+ + EA++VL +AGAD D    +   G+P  D                            +PLL A +S   + EAL  L+  GAD N  D +    LH      T  P V+E+VDLLLR GA ET  + +  TP  +++ L ++ P+A E       LL  APADRAWRRRG++V+ RA
Sbjct:   13 HALAAE--IFKLVSSSCGTSSEEWVEWLRVPLNCAVTSGNEDLVTRLLDTGGDVN-------RLDHLGRSTTLISAGADVNDRDPAEGCYPLHAAVRRGCDRVVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPN-AEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADV---ESLPGSPCYD----------------------------TPLLAAAESM--SNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQT--PGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRA 356          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.000e-22
Identity = 115/379 (30.34%), Postives = 159/379 (41.95%), Query Frame = 1
Query:  313 TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVE----------------AIDVLAQAGADIDA-------------------------------VPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYDVTPLYRLLELNNPE----AESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVP 1296
            TA+H A     A +   L  KGA   + +S G TPL +AA     A  ++LL    ++    +  A+S +  A+ Q            GY  V+R+ I+H    +N  + DG+TALH A   GKVE                A   L  AGAD+                                 V  K+  G      AS  + A  I +L    A   + A  ++PL  A Q  R  + A + L+  GA V   +    T LH + A A + P   E+VDLLLR GADET  S +      ++ L   E    AE V RVR+LL  APADRAWRRRGF++L RA     R++   R      +G      ++  P
Sbjct:  376 TALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEGNVAATQALLDAGADASSQSEGEASSALDCAVCQ------------GYTDVVRVKIEHE-IDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGR--LAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGS-PGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEP 738          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 7.810e-21
Identity = 125/426 (29.34%), Postives = 180/426 (42.25%), Query Frame = 1
Query:  133 MNNSEGREHIRGAEENVFNLVAH-STSAAWGQWLQAPLELAASQGDRTLAVQLVAAGA---------------------------------AFG-TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALE--------------GKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAAN-SPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYD-VTPLYRLLELNNPEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLKLPPRADGGAD 1257
            M   E R  + G E  +F LV+  + SA W +WL APL+ A ++GD+  A+ L+ AGA                                 A G +A+H AI GGH  LA + +  GA     D DG TPLH AA  +    V +LL          + A  +           SPL+ A  +  +   R ++++G A I + +  G TALH AA+E                 + ID L +A  D++A   + +                           EGS      +PL  A   ++ +M  L     +GA  NA   D  T LH LC +        + VDLLLR GADET    +  TP   ++  +N      + +R++L+ AP DRAWRR G +V+CRA P +V +    R  GG D
Sbjct:    1 MAAEEDRTALNGLERTLFKLVSEKAASAQWSKWLGAPLQHAVAEGDKDRALALLKAGADGRGNKEMVSTLLAKGGERTALHGALADVGLLDAKGRSALHYAIEGGHLQLAGDAVIGGADPKAKDIDGNTPLHFAAAYDDDKFVGTLLR---------RGAQVNAANNEGNLNERSPLFFAHDQAAMT--RTLLEYG-ADILSVDQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEARSVEFF---------------------------EGSQRFRGLTPLHLAAYHQKVSMAELS---RKGAVDNAKCDDGRTPLHMLCTNPKLNSW--DTVDLLLRWGADETAIDNEGYTPEALVVGRSNRS----RALRQMLDKAPEDRAWRRWGTLVMCRALPGKV-MTTSLRGRGGRD 377          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.420e-18
Identity = 114/392 (29.08%), Postives = 148/392 (37.76%), Query Frame = 1
Query:  127 MAMNNSEGREHIRGAEENVFNLVAHSTSA-AWGQWLQAPLELAASQGDRTLAVQLVAAGAAFG-TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSV---------------------MMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDLLLRLGADETR-CSYDVTPLYRLLELNNPEAE--SVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRL 1224
            +A  N   +E ++G EE V +L+  +       +WL APLE A ++GD  LA +LV AGA  G  A+H A+R GH  +A  LLE GA     + D  TP                                                       +   L +  +S L  AAS   +++LR++I HG   +N   A G TALH AA   +  AIDVL  AGADI A    M    PL                                                                   + Q   S       V++V LLLR GADET  C    T   R+     P  E    +R R LL  APADRAWRRRG +VLC A+P R++L
Sbjct:    8 IAEKNKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHG-MEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQA--RNMSGSRPLX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGS-------VQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL 360          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 6.360e-17
Identity = 103/321 (32.09%), Postives = 151/321 (47.04%), Query Frame = 1
Query:  412 TPLHVAARRNKPAIVRSLL---LLPPNSGDTDQAAATSVMMKALTQKGL----SPLYIAASRGYLKVLRLMIKHGGAHINT-PNADGRTALHGAALEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNP-ATIIALLKHGAAVEGSPAAANSPLLRAVQSR--------------------RPTMEA-----LLPLIHQGADVNAFDV-DEDTSLHQLCASATAIPCVVEIVDLLLRLGADETRCSYD-VTPL---------YRLLELNNPEAESVKRVRRLLENAPADRA---WRRRGFMVLCRAFPCRVRLKL 1230
            TP+H+AA+  +  IV  L+          + D +             G+    + L+  A  G++ V+  +IK     +++   + G TALH AA   ++  ID L +AGAD++A    + VGT L  AA   +  AT++ALL+HGA V+     + +PL  AV++R                    R ++E      LL L+ +GA VN     D +T LH     +  +      VD+LL+ GADET  ++   TPL          R L   +   E    +R LL NAP DRA   W RRGF VLCRAFP RV+ +L
Sbjct:  130 TPIHLAAKAGQAGIVGMLMDAGACADRCANEDASTWEQRYDPEYDWSGIRMTENALHFGAIGGHVDVIDEIIKRQPLTMSSVAESTGYTALHYAAKHSQLGVIDALVEAGADLEA-EGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLALLGRGAHVNTKGASDGNTPLHLAAEKSFRVK-----VDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDA--IRTLLVNAPKDRANRAWSRRGFFVLCRAFPERVQQQL 442          
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Match: A0A6H5K8N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.430e-16
Identity = 106/371 (28.57%), Postives = 152/371 (40.97%), Query Frame = 1
Query:  238 PLELAASQGDRTLAVQLVAAGAA----FG-----TAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHVAARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASRGYLKVLRLMIKHGGAHINTPNADGRTALHGAA-LEGKVEAIDVLAQAGADIDAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAVQSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVV-EIVDLLLRLGADETRCSYDVTPLYRLLELNN--------------PEAESVKRVRRLLENAPADRAWRRRGFMVLCRAFPCRVRLK----LPPRADGGADSG 1263
            PL  A S     +   L+AAGA     FG       +H A   GH G+ T LL  GA     D+ G  PLH A   ++ A   +LL+        + +++              PL +AA +G + ++ +++KHG    +  +  G TALH AA       A+  L  AGA+I+    +   G+PL                 H AA   + ++ +SP            E +L L+ +GA VN   V   T+   L  +    P  +  +VDLLLR G D+T    D      LLEL+                + + + R R LL  A  DRAWRRR   V+ RA   RV       +  R  GG D G
Sbjct:   35 PLFEAVSDEQEQIVADLLAAGACPNARFGGEEGYAPLHVASSRGHVGILTTLLSFGAHRDAVDNRGARPLHHAIAEDRVAATEALLVAGALGATPEDSSS------------FRPLVLAACKGSIDIINVLLKHGVDVNSRDDVVGATALHAAANCASGASAVHALVDAGAEINV--QRKDGGSPL-----------------HYAAASRASSSPSSPF-----------ETILALLQRGASVN--QVHSGTAQTPLLLACQHRPRGLGSVVDLLLRWGGDDTVVGGDGRTASELLELDQHHHATETEHHQCHLEQDDEIGRARTLLSRAKEDRAWRRRCLPVMLRAHQQRVCTAPSGDIEARRRGGRDHG 361          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10502.710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K5_ECTSI3.720e-5837.66EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7FKL4_ECTSI1.670e-3633.08Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G6X8_ECTSI7.280e-2732.97Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE4.210e-2533.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSI6_ECTSI5.090e-2531.11Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JHY9_9PHAE5.000e-2230.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4P5_9PHAE7.810e-2129.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI2.420e-1829.08Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G3P2_ECTSI6.360e-1732.09Similar to ankyrin 3, epithelial isoform e isoform... [more]
A0A6H5K8N6_9PHAE1.430e-1628.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10502contigS-firma_F_contig10502:2246..4342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G2K5
PFAMsAnk_2
Max annot lvl2759|Eukaryota
Evalue5.57e-59
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
COG categoryI
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-21
Ec32 orthologEc-11_002570.1
Exons2
Model size1366
Cds size1239
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10502.710.1prot_S-firma_F_contig10502.710.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10502 3104..4342 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.4399104-UTR-S-firma_F_contig10502:2245..23261622815586.4399104-UTR-S-firma_F_contig10502:2245..2326Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10502 2246..2326 +
1696949435.7010028-UTR-S-firma_F_contig10502:2245..23261696949435.7010028-UTR-S-firma_F_contig10502:2245..2326Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10502 2246..2326 +
1622815586.4505918-UTR-S-firma_F_contig10502:3058..31031622815586.4505918-UTR-S-firma_F_contig10502:3058..3103Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10502 3059..3103 +
1696949435.7202952-UTR-S-firma_F_contig10502:3058..31031696949435.7202952-UTR-S-firma_F_contig10502:3058..3103Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10502 3059..3103 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.4629445-CDS-S-firma_F_contig10502:3103..43421622815586.4629445-CDS-S-firma_F_contig10502:3103..4342Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10502 3104..4342 +
1696949435.7326508-CDS-S-firma_F_contig10502:3103..43421696949435.7326508-CDS-S-firma_F_contig10502:3103..4342Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10502 3104..4342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10502.710.1

>prot_S-firma_F_contig10502.710.1 ID=prot_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=413bp
MAMNNSEGREHIRGAEENVFNLVAHSTSAAWGQWLQAPLELAASQGDRTL
AVQLVAAGAAFGTAVHAAIRGGHAGLATELLEKGAPTSTTDSDGMTPLHV
AARRNKPAIVRSLLLLPPNSGDTDQAAATSVMMKALTQKGLSPLYIAASR
GYLKVLRLMIKHGGAHINTPNADGRTALHGAALEGKVEAIDVLAQAGADI
DAVPHKMYVGTPLEDAASTVNPATIIALLKHGAAVEGSPAAANSPLLRAV
QSRRPTMEALLPLIHQGADVNAFDVDEDTSLHQLCASATAIPCVVEIVDL
LLRLGADETRCSYDVTPLYRLLELNNPEAESVKRVRRLLENAPADRAWRR
RGFMVLCRAFPCRVRLKLPPRADGGADSGTHGAVTATMVPESRSSRRRML
DDPVASGCGGGVG
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mRNA from alignment at S-firma_F_contig10502:2246..4342+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10502.710.1 ID=mRNA_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2097bp|location=Sequence derived from alignment at S-firma_F_contig10502:2246..4342+ (Sphaerotrichia firma ET2_F female)
GAAACACCACGCGACACGCAGAGCCAGGAACATTTACATTTCTACCTAAC AGCCTGCCGCACCGAAGGGTCTACCTACGAGGTGAGCCTGTTATTTATTC TTGGCGTGAGTATCTTCCGTTTCGTCCCCGGGACATTCAGAATAAAAGCG GTGGGAATGGTGGGAAGGATATCGTCTAGTCTACCTGTAAAGAGGGTACC CTGCTGTCGGTAGTTTGGATGCGGTGCTGGAAAATGAGCCCGCGCGCACC GGCCGCTCTCCGTGTGAACCATCACGAACCAGTGCCCCCCCTGGTCTCGC CTGTAGTGTGTGATTCTTCGACGGTTCTGATTTCTGTGTCGAAACAGCCG ACCCGAAAACGGATAATACGTCAGCAGGGTGGTTTCTACTTTCTACCCCA CGCGCATGTTGAAGTCGCGTGTGTGACAGCCGTGCATGTGTACGCTACGT CCTGTGCATACGTTAAGAGGTTCAGACCACCAAGCGGGTAGTCGCACCTG CTGCCTACTGCCTACCCTCACAGGCAGCAGGTTCCTCCGCGTTGTAGTAT CCGTATCCGTATCCGTAACCTCGGCCGCTTCAATCGCCGCGTTTTCCGGT TTGTCGCCTGCCTTCCGAAGATGTCCAACATACACCTCACCACCACACAC ACGAAGAACATCCGGGTGTTAATATGTTAAAACCATCGTGTAGACTCTAC GTTTCCGACAAAAACTCGGTGCCCGTCGTACCTTACCTCTGCTGCACCTC AACGCCGGAACACGTTTCCCGACTTCGATTGTGCCGCCATGTTCTTACGC GGGTGCAAACTAGGAAGGAAACATACAGCCCGGTGATCCGTAGACGGGGA GGTAGGCCATGGCCATGAACAACTCAGAGGGCCGGGAGCATATTCGAGGT GCAGAGGAGAACGTGTTCAACCTTGTCGCCCACTCGACGTCTGCGGCGTG GGGACAATGGCTCCAGGCCCCTCTCGAGCTGGCGGCTTCGCAGGGAGACA GGACCCTAGCCGTTCAGTTGGTCGCCGCGGGCGCAGCATTCGGGACGGCG GTCCATGCCGCCATTCGAGGAGGACACGCGGGGCTTGCGACCGAGCTCCT CGAAAAAGGTGCGCCCACGAGCACGACGGACTCGGACGGTATGACCCCTC TACACGTTGCTGCTCGCCGCAACAAGCCTGCGATAGTGCGGTCGTTACTG CTGCTGCCGCCCAACAGCGGTGATACTGATCAGGCAGCGGCCACTAGCGT GATGATGAAGGCTTTGACTCAGAAGGGGTTGTCTCCCCTGTACATCGCCG CGAGCCGGGGCTACCTCAAGGTGCTACGGCTGATGATCAAGCACGGCGGT GCCCACATCAACACCCCCAACGCGGACGGCCGGACAGCCTTACACGGCGC CGCCCTCGAGGGCAAGGTCGAAGCGATAGACGTTCTCGCTCAGGCTGGAG CTGACATCGACGCCGTGCCCCATAAAATGTACGTCGGCACCCCTCTCGAA GACGCCGCTTCAACCGTCAACCCCGCTACCATCATCGCGCTGCTGAAGCA CGGCGCGGCGGTGGAAGGCTCGCCCGCCGCAGCGAACAGCCCTCTCTTGC GCGCCGTCCAATCCCGGAGGCCCACCATGGAAGCCTTGCTGCCGCTGATC CATCAAGGCGCAGACGTGAACGCCTTCGACGTAGATGAAGACACGTCGCT CCACCAACTGTGCGCCTCGGCGACTGCGATACCGTGCGTGGTCGAGATTG TAGATCTTCTGCTACGGTTGGGGGCAGACGAGACACGTTGCAGCTACGAC GTTACTCCTCTCTATCGGCTCCTGGAACTCAATAACCCGGAAGCGGAGAG CGTGAAGCGGGTGCGCCGGCTGCTGGAGAACGCCCCGGCCGACCGTGCCT GGCGCCGCCGGGGCTTCATGGTCCTGTGCCGGGCTTTTCCCTGTAGGGTG CGGCTGAAGCTGCCGCCAAGGGCGGATGGCGGCGCCGACTCCGGTACGCA CGGCGCCGTCACCGCCACGATGGTGCCCGAATCTCGCTCCAGCAGGCGCC GTATGCTTGATGATCCAGTGGCAAGCGGCTGCGGCGGTGGTGTTGGT
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Coding sequence (CDS) from alignment at S-firma_F_contig10502:2246..4342+

>mRNA_S-firma_F_contig10502.710.1 ID=mRNA_S-firma_F_contig10502.710.1|Name=mRNA_S-firma_F_contig10502.710.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2478bp|location=Sequence derived from alignment at S-firma_F_contig10502:2246..4342+ (Sphaerotrichia firma ET2_F female)
ATGGCCATGAACAACTCAGAGGGCCGGGAGCATATTCGAGGTGCAGAGGA
GAACGTGTTCAACCTTGTCGCCCACTCGACGTCTGCGGCGTGGGGACAAT
GGCTCCAGGCCCCTCTCGAGCTGGCGGCTTCGCAGGGAGACAGGACCCTA
GCCGTTCAGTTGGTCGCCGCGGGCGCAGCATTCGGGACGGCGGTCCATGC
CGCCATTCGAGGAGGACACGCGGGGCTTGCGACCGAGCTCCTCGAAAAAG
GTGCGCCCACGAGCACGACGGACTCGGACGGTATGACCCCTCTACACGTT
GCTGCTCGCCGCAACAAGCCTGCGATAGTGCGGTCGTTACTGCTGCTGCC
GCCCAACAGCGGTGATACTGATCAGGCAGCGGCCACTAGCGTGATGATGA
AGGCTTTGACTCAGAAGGGGTTGTCTCCCCTGTACATCGCCGCGAGCCGG
GGCTACCTCAAGGTGCTACGGCTGATGATCAAGCACGGCGGTGCCCACAT
CAACACCCCCAACGCGGACGGCCGGACAGCCTTACACGGCGCCGCCCTCG
AGGGCAAGGTCGAAGCGATAGACGTTCTCGCTCAGGCTGGAGCTGACATC
GACGCCGTGCCCCATAAAATGTACGTCGGCACCCCTCTCGAAGACGCCGC
TTCAACCGTCAACCCCGCTACCATCATCGCGCTGCTGAAGCACGGCGCGG
CGGTGGAAGGCTCGCCCGCCGCAGCGAACAGCCCTCTCTTGCGCGCCGTC
CAATCCCGGAGGCCCACCATGGAAGCCTTGCTGCCGCTGATCCATCAAGG
CGCAGACGTGAACGCCTTCGACGTAGATGAAGACACGTCGCTCCACCAAC
TGTGCGCCTCGGCGACTGCGATACCGTGCGTGGTCGAGATTGTAGATCTT
CTGCTACGGTTGGGGGCAGACGAGACACGTTGCAGCTACGACGTTACTCC
TCTCTATCGGCTCCTGGAACTCAATAACCCGGAAGCGGAGAGCGTGAAGC
GGGTGCGCCGGCTGCTGGAGAACGCCCCGGCCGACCGTGCCTGGCGCCGC
CGGGGCTTCATGGTCCTGTGCCGGGCTTTTCCCTGTAGGGTGCGGCTGAA
GCTGCCGCCAAGGGCGGATGGCGGCGCCGACTCCGGTACGCACGGCGCCG
TCACCGCCACGATGGTGCCCGAATCTCGCTCCAGCAGGCGCCGTATGCTT
GATGATCCAGTGGCAAGCGGCTGCGGCGGTGGTGTTGGTATGGCCATGAA
CAACTCAGAGGGCCGGGAGCATATTCGAGGTGCAGAGGAGAACGTGTTCA
ACCTTGTCGCCCACTCGACGTCTGCGGCGTGGGGACAATGGCTCCAGGCC
CCTCTCGAGCTGGCGGCTTCGCAGGGAGACAGGACCCTAGCCGTTCAGTT
GGTCGCCGCGGGCGCAGCATTCGGGACGGCGGTCCATGCCGCCATTCGAG
GAGGACACGCGGGGCTTGCGACCGAGCTCCTCGAAAAAGGTGCGCCCACG
AGCACGACGGACTCGGACGGTATGACCCCTCTACACGTTGCTGCTCGCCG
CAACAAGCCTGCGATAGTGCGGTCGTTACTGCTGCTGCCGCCCAACAGCG
GTGATACTGATCAGGCAGCGGCCACTAGCGTGATGATGAAGGCTTTGACT
CAGAAGGGGTTGTCTCCCCTGTACATCGCCGCGAGCCGGGGCTACCTCAA
GGTGCTACGGCTGATGATCAAGCACGGCGGTGCCCACATCAACACCCCCA
ACGCGGACGGCCGGACAGCCTTACACGGCGCCGCCCTCGAGGGCAAGGTC
GAAGCGATAGACGTTCTCGCTCAGGCTGGAGCTGACATCGACGCCGTGCC
CCATAAAATGTACGTCGGCACCCCTCTCGAAGACGCCGCTTCAACCGTCA
ACCCCGCTACCATCATCGCGCTGCTGAAGCACGGCGCGGCGGTGGAAGGC
TCGCCCGCCGCAGCGAACAGCCCTCTCTTGCGCGCCGTCCAATCCCGGAG
GCCCACCATGGAAGCCTTGCTGCCGCTGATCCATCAAGGCGCAGACGTGA
ACGCCTTCGACGTAGATGAAGACACGTCGCTCCACCAACTGTGCGCCTCG
GCGACTGCGATACCGTGCGTGGTCGAGATTGTAGATCTTCTGCTACGGTT
GGGGGCAGACGAGACACGTTGCAGCTACGACGTTACTCCTCTCTATCGGC
TCCTGGAACTCAATAACCCGGAAGCGGAGAGCGTGAAGCGGGTGCGCCGG
CTGCTGGAGAACGCCCCGGCCGACCGTGCCTGGCGCCGCCGGGGCTTCAT
GGTCCTGTGCCGGGCTTTTCCCTGTAGGGTGCGGCTGAAGCTGCCGCCAA
GGGCGGATGGCGGCGCCGACTCCGGTACGCACGGCGCCGTCACCGCCACG
ATGGTGCCCGAATCTCGCTCCAGCAGGCGCCGTATGCTTGATGATCCAGT
GGCAAGCGGCTGCGGCGGTGGTGTTGGT
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