mRNA_S-firma_F_contig105.695.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 3.260e-148 Identity = 268/396 (67.68%), Postives = 303/396 (76.52%), Query Frame = 1
Query: 217 RRKAPVREKKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDV-RMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSG-REDEDGG-VAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDD-FSIDRLEMACVDMRACGTGGDGIGSGNTKGAGGSMSGEAGEHTNSNTKGXXXDHAAVVLGSSGGGQGSPANGDDSAAPEGTPR-SGNSVR---SSSIRNS-GR-SGDRGGSGALEVG---SRNTGNGSSSSGGGPHAAADSIVPRYGYFRRVSKSELEELLADTS 1365
RRKAPVREKKAYDT VR+FSPDGSIYQVEYAV+AA+KGGLTIGVQTD+GLVLAA GRRRSPLLK++SVSKIA++D RMCCAMSGLLPDGRLLLD+ARTWVQEHRFEFDEAPSVEAVA+QLSRLALKFNGYDKDG+AG+G RE+EDGG AMSRPVGVALLMAG+D G+RP+LYHLDPSGAYVQWRARAIG+KG AAEAKLE GPFEGM+VRRAM VLGVL+E LGDD FS DRLEM CVDM G G GSG+ G + EH ++ DH V G G G P G+ S+ P SG V +S +RN GR SG GG G LE G R G+ S++SG G +AA S VPRYGYFRRV KSE++ELLA ++
Sbjct: 25 RRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMM-----GGGRGSGDGGGGERGVCSPGAEHGATSAS----DHDNVGGGGDGAISGPPFAGEGSSVSAAPPSLSGGGVNDGSASGVRNFVGRDSGSSGGGGVLEGGVEVGREDGS-SAASGVGRSSAAASFVPRYGYFRRVPKSEMDELLAGST 410
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: A0A1X6NLH8_PORUM (Proteasome subunit alpha type n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH8_PORUM) HSP 1 Score: 190 bits (482), Expect = 1.100e-52 Identity = 103/230 (44.78%), Postives = 141/230 (61.30%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G +G+ T EG++LA + R SPLL +S+ K+ EID + AMSGL D R L+DH R QEHRF +DE SVE+ L LAL+F +DGR +DG AM+RP GVALL+AG+D P LYH DPSG YV+W A+AIG A+ L++A GMT+ A + L LK + + S + +E+A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGICTTEGVILAVEKRLTSPLLTPSSIEKVLEIDTHIGAAMSGLTADARTLIDHGRIVTQEHRFTYDEPLSVESTTQSLCDLALRFG---EDGR-------DDGADAMARPFGVALLIAGVDDEGGPALYHTDPSGTYVKWMAKAIGAGSEGAQTALQEAWSA-GMTLAEAEGLALKTLKAVMEEKVSGENVEVAAV 223
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: UPI0002658A20 (proteasome subunit alpha type-5 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658A20) HSP 1 Score: 189 bits (479), Expect = 2.730e-52 Identity = 97/234 (41.45%), Postives = 146/234 (62.39%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACVDMRA 942
+ YD GV +FSP+G ++QVEYA++A + G IG+QT EG VLA + R SPL++S ++ KI EID + CA+SGL+ D R ++D AR Q H F +DE+ VE+ A +S LA+KF +++D G AMSRP GVA+L AGID P L+H+DPSG YV++ A+AIG A+ L++ + MT++ A+ +L +LK+ + + +D +E+A + A
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLMESTTIEKIVEIDKFIGCAVSGLMADSRTMIDKARVEAQNHWFNYDESMRVESCAQAVSNLAIKFG------------DNDDDGTAMSRPFGVAILFAGIDEKKGPQLFHMDPSGTYVEFLAKAIGSGCEGAQQALQEKY-HKSMTLKEALKEILVILKQVMEEKLGVDNVEVATITKEA 225
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: M7XIX9_RHOT1 (Proteasome subunit alpha type n=6 Tax=Rhodotorula TaxID=5533 RepID=M7XIX9_RHOT1) HSP 1 Score: 188 bits (477), Expect = 5.650e-52 Identity = 102/230 (44.35%), Postives = 150/230 (65.22%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G T+G+QT EG+VLA + R +SPLL+S SV KI EID + CAMSGL D R +++HAR Q H F +DE VE+V +S LAL+F G G +ED +MSRP GVALL+AGIDH + P L+H DPSG ++++ A+AIG A+++L+ + + MT+ +A V+ L VLK+ + + + +++A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIQTSEGVVLAVEKRTQSPLLESDSVEKIMEIDRHIGCAMSGLTADARTMVEHARVTAQNHVFTYDEPIKVESVTQSVSDLALRF---------GEGANEED--ASMSRPFGVALLIAGIDH-HGPQLFHADPSGTFMRYHAKAIGSGSEGAQSELQDSYD-KSMTLAQAKVLALKVLKQVMEEKLDHNNVQLAQV 221
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 187 bits (474), Expect = 1.440e-51 Identity = 101/230 (43.91%), Postives = 143/230 (62.17%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G IG+QT EG+VLA + R SPL++ ++ KI EID + CA+SGL+ D R ++D AR Q H F +DE SVE+VA +S LA++F D DG A MSRP GVA+L AGID P L+H+DPSG YVQ+ A+AIG A+ L++A + MT++ AM L +LK+ + + S +E+A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQFGDSDDDGNA------------MSRPFGVAILFAGIDEKG-PQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEAYN-KSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: A0A1Q3E886_LENED (Proteasome subunit alpha type n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E886_LENED) HSP 1 Score: 187 bits (474), Expect = 2.780e-51 Identity = 102/230 (44.35%), Postives = 146/230 (63.48%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G T+GV+TDEG+VL + R +SPL++S+S+ KI EID + CAMSGL D R ++DHAR Q H F +DE VE+V + LAL+F G DED MSRP GVALL+AGID P LYH DPSG +V+++A+AIG AA+A+L+ + MT+R A ++ L +LK+ + + +++A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTDEGVVLGVEKRVQSPLIESSSIEKIMEIDAHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF---------GESVHDED--AMMSRPFGVALLIAGIDELG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQDKWHSK-MTLREAQLLTLRILKQVMEEKLDRHNVQLAQV 221
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: UPI001C7A0D83 (proteasome component pup2 n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7A0D83) HSP 1 Score: 186 bits (472), Expect = 2.810e-51 Identity = 100/230 (43.48%), Postives = 148/230 (64.35%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G T+G++TD+G+VLA + R +SPL++S+S+ KI EID + CAMSGL D R ++DHAR Q H F +DE VE+V + LAL+F G DED MSRP GVALL+AGID P LYH DPSG +V+++A+AIG AA+A+L++ + MT++ A ++ + VLK+ + + +++A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTLGIRTDQGVVLAVEKRVQSPLIESSSIEKIMEIDRHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF---------GESVHDED--AMMSRPFGVALLIAGIDEVG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQEKW-YSQMTLQEANILAMRVLKQVMEEKLDQHNVQLAQV 221
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: A0A7M7ST72_STRPU (Proteasome subunit alpha type n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7ST72_STRPU) HSP 1 Score: 184 bits (467), Expect = 1.440e-50 Identity = 99/230 (43.04%), Postives = 146/230 (63.48%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G IG++T+EG+VLA + R SPL+++ S+ KI EID + CAMSGL+ D R ++D AR Q H F ++E SVE+V +S LAL+F +DE G AMSRP GVALL AGID PILYH+DPSG ++Q+ A+AIG A+++L++ + +T++ A L VLK+ + + S +E+A +
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLMEATSIEKIVEIDSHIGCAMSGLIADSRTMIDRARVEAQSHWFTYNEKMSVESVTQAVSNLALQFG------------DDEAGSGAMSRPFGVALLFAGIDQKG-PILYHMDPSGTFLQFDAKAIGSGSEGAQSQLQEVF-HKSLTLKEACKESLVVLKQVMEEKLSSTNVEVATI 220
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: A0A1D1XX99_9ARAE (Proteasome subunit alpha type (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XX99_9ARAE) HSP 1 Score: 184 bits (467), Expect = 1.720e-50 Identity = 103/231 (44.59%), Postives = 145/231 (62.77%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPF-EGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G +G+QT EG+VLAA+ R SPLL S+S+ KI EID + CAMSGL D R ++DHAR Q HRF +DEA VE+V + LAL+F G + G E MSRP GVALL+AG+D N P L+H DPSG + Q+ A+AIG A+ +LE G + + +T+ +A + L VLK+ + + + +E+A V
Sbjct: 10 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRVTSPLLVSSSIEKIMEIDKHLGCAMSGLTADSRTMIDHARVAAQSHRFTYDEAIKVESVTQAVCDLALRF------GESAEGEES-----IMSRPFGVALLIAGVDE-NGPQLFHADPSGTFTQFDAKAIGSGSEGAQTELE--GEYHKSITLEKAETLSLRVLKQVMEEKLNNTNVELASV 226
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Match: V2XI69_MONRO (Proteasome subunit alpha type n=7 Tax=Agaricomycetes TaxID=155619 RepID=V2XI69_MONRO) HSP 1 Score: 184 bits (466), Expect = 2.070e-50 Identity = 100/230 (43.48%), Postives = 146/230 (63.48%), Query Frame = 1
Query: 241 KKAYDTGVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEIDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEDGGVAMSRPVGVALLMAGIDHGNRPILYHLDPSGAYVQWRARAIGEKGTAAEAKLEKAGPFEGMTVRRAMVVVLGVLKETLGDDFSIDRLEMACV 930
+ YD GV +FSP+G ++QVEYA++A + G T+G++T+ G+VLA + R +SPLL+S+S+ KI EID + CAMSGL D R ++DHAR Q H F +DE VE+V + LAL+F G DED MSRP GVALL+AGID P L+H DPSG +V+++A+AIG AA+A+L+ + MT++ A ++ L VLK+ + + +++A V
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIKTEHGVVLAVEKRVQSPLLESSSIEKIMEIDRHLGCAMSGLTADARTMIDHARVTAQNHAFTYDEKIKVESVTQAVCDLALRF---------GESVHDED--AMMSRPFGVALLIAGIDELG-PQLFHTDPSGTFVKYQAKAIGSGSEAAQAELQDKW-YSQMTLQEAQILTLRVLKQVMEEKLDHHNVQLAQV 221 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig105.695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig105.695.1 >prot_S-firma_F_contig105.695.1 ID=prot_S-firma_F_contig105.695.1|Name=mRNA_S-firma_F_contig105.695.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=445bp MCELYQARSKCTYKPPYSARIHHTQRLFLPPTPRFVSTWSNRCNQCRRRKback to top mRNA from alignment at S-firma_F_contig105:6277..9233- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig105.695.1 ID=mRNA_S-firma_F_contig105.695.1|Name=mRNA_S-firma_F_contig105.695.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2957bp|location=Sequence derived from alignment at S-firma_F_contig105:6277..9233- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig105:6277..9233- >mRNA_S-firma_F_contig105.695.1 ID=mRNA_S-firma_F_contig105.695.1|Name=mRNA_S-firma_F_contig105.695.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2670bp|location=Sequence derived from alignment at S-firma_F_contig105:6277..9233- (Sphaerotrichia firma ET2_F female)back to top |