mRNA_S-firma_F_contig10480.676.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A7S2RIG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIG3_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.620e-64 Identity = 215/635 (33.86%), Postives = 295/635 (46.46%), Query Frame = 1
Query: 1 MAGRDGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDG--------------GKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGP--RAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEEDGATL-----PTRTPRGMLGAFAVERRGAGDSFHIMASCMHAGGALL----------LDAR---------------RGMELSPIAADVSA----VHRIGFDDHQPVAGAAEGA--CAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDGPATPNVRPGRGGVRQAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAHYHEFQYAVKADRRRKARERLATL-RARQQAGVAGAALLYNDPADEDSDGGSVADRAEYDDDFEIQG-------TPFGMPEAAA--PFIATV---------GDRTPLPLTLSALESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLS---QLDGAHWLTHTPHN-----FHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVLRSTER 1668
M +GRF+HLLQPIRD+A NWDIDVAS LEEYL +LE L I+ GK ++NFAEAALLIQGS LIYSKKVE L+ L+ LQT+++ + +++++G+ + ++ + E EFL LDDV++E +ID++ +T P R P M+ A E RG+ +F + + +HA GALL LDA +G SP D + V GFDD+ P A E A S + L F GPAT V A + DPW D H + AKPLK G+TY A K ++ EFQY + +RRR ER + R V GAA + A + + D +++DD E G T F E A P A GD P+ L A + SY L + HI F++G D+YA ET LS+RV++W+ R++P+L EQ R AFDI YG ++I +L+ L P N F+ +V + F+VCR+FLA LQL N+GNV L H V ++ LK+ + STER
Sbjct: 10 MDKEEGRFAHLLQPIRDIAVNWDIDVASALEEYLEDLESLTITLGDELQEAVTDPVPGQEGKASVNFAEAALLIQGSALIYSKKVEYLHSLV---LQTLEILSSQKADKGKHKQQLEKDILADENEFREPGSEFLLLDDVIKEGKDIDMDHGNRRSTTAAIEHPGRAPAPMMTALLREDRGS--AFRMNSCHVHASGALLIGSGGAVTPELDALVSPASLAPGRPHAVPQGAAWSPGGVDEDSFEGHVDGGGFDDYDPTEAAEEPAPLTPRPASFASGTSSLLFSTAVV------------GPATSPV--------PAAKSDPWAMHDAHDPSKTVAKPLKKGKTYRLPDSLSNKASRDAPKRSNAKDKGLRLQGLLCSEFQYLITRERRRALAERRGSAARTHAPMAVFGAAADEEEAASSPINFHAYDDGIDFEDDAEDAGGFDHGFETDFAGDEGDAHDPTAADAASGLEEGYGGDMAPIALD-DAFRVAPKSYADLCQAHITAFLKGADQYAHETQLSRRVSEWQSRLEPVLAEQTQRRAFDIHLYGEEIIHDLATAGSLKVKSGKKGAPSNDKVIPFNSIVADKPHFEVCRMFLASLQLCNNGNVRLHHTDGVVCGMDD-LKVEVLSTER 617
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A8J9RTY5_9CHLO (Condensin-2 complex subunit H2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RTY5_9CHLO) HSP 1 Score: 219 bits (557), Expect = 1.400e-59 Identity = 208/613 (33.93%), Postives = 275/613 (44.86%), Query Frame = 1
Query: 19 RFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEEDGATLPTRTP-RGMLGAFAVERRGAGDS------FHIMASCMHAGGALLLDARRG------MELSPIAADVSAVHRIGFDDHQPVAGAAEGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMG------------------DGPATPNVRPGRGGVRQAPR--VDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAHYHEFQYAVKADRRRKARERLATLRARQQAG------VAGAALLYNDPADEDSDGG-SVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESS---------------AVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTH--------TPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVLRSTER 1668
RF+HLLQPIRDLAANWDI++A+ELEEYL LE + SFDGG + LNFAEAALLIQGS +YSKKVE L+ L+Y+ L + KR + G GG + +D E EE FL LDD+LQE IDLE DG P P + A+E G G+S + I +H GALLL+A G M L H +G D G G PI Q+ D D + G M +G +VR R ++ A R DP+ LD H A P KP K + + + A A A PQP + + EF+Y ++A R A E+ A LR ++ G G+A A + DG ++ + AEY+ F+ G G APF GD L +A E SYE R HI+ M + +T L+ RVA WR ++ P+L+EQD R FDI YG V+ +L+++ A P F V + V R+F A LQLAN+GNV L+ + P L L S +R
Sbjct: 13 RFTHLLQPIRDLAANWDINIANELEEYLGVLEQITFSFDGGPS-LNFAEAALLIQGSACVYSKKVEHLHSLVYQALNFIGE---KRKQSGGGGQKQV---DDVVEFEDEEAFLNLDDILQEGTGIDLE---DGNAAPRELPIKAPTVVLALEDSGHGESDGGAGSYRIATCSVHKSGALLLEAHDGDLMDEQMRLCDAVGPTHLRHLLGEDLQSHAEEETAGPSGAEGEPI-EQDIYDGGDGFAGDDDDDGGAMQPLEPAESMPAHGAEPPWLEGADEGHVRQARSRLQPAHRELFDPYAPLDHHDAGSMPQKPFKKMKPRSRRRAPKVKAPAVDAFAPPQPSAPSQLT---FPEFEYVLRA---RAALEQ-AQLRGSRKRGEHLWRDAQGSAEEQQLSAFQPEDGEQALPEEAEYEGGFDDNGDDDGF-GVEAPFDDAGGDMDMTALAQAAAEGGFPAGVGAWQFIDQDGEPSYEDRCRMHIETLMAAAAEAEVQTGLAARVASWRDKLAPVLEEQDARGDFDIHAYGEVVLEDLAKMSLADPSNPEELRLGKVAPVTFERVAHREHKWQVSRLFSALLQLANNGNVILLRGSDP----SQPFSLRLASLDR 602
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: UPI00138FB64E (condensin-2 complex subunit H2 isoform X2 n=5 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FB64E) HSP 1 Score: 212 bits (540), Expect = 2.520e-57 Identity = 202/634 (31.86%), Postives = 295/634 (46.53%), Query Frame = 1
Query: 19 RFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGPRAPTGEDADI-LEQEEEFLELDDVLQEADNIDLEEEED---GATLPTRTPRGMLGAFAVERR-----------GAGDSFHIMASCMHAGGALLLDARRGMELS------PIAADVSAVHRIGFDDHQPVAG--AAEGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDGPA-------TPNVR--------PGRGGVRQAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAH-------------YH-----------------EFQYAVKADRRR------KARERLATLRARQQAGVAGAA---LLYNDPADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESSAVS-YEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVLRSTERRRGVEA 1686
R+SHLLQPIRD+ NWDIDVA++LEEYL E+E + ISFDGGKT++NFAEAALLIQGS IYSKKVE LY L+Y+TL + + KR ++ G+D D ++E++FL LDD+ +EA NIDL+E+ D + L RTP ++ ER+ G+ + F + C+H GAL+LD L P + A+ + D +PV + A S IG + DDD G+ G + A P R P + +A DPW LDPHA KP + GR + GMAK + +A +H +H EF+Y + RR K ++ LA +Q A + N+P +D D G + + DD+ E G F P T+ + P+ L +A + VS YE L+R +++ ++ +YA ET+LSKRV W ++ P L+E++ FDI YG DV+ + + P F +++ ++ F++CR FLA LQLAN+ NVE+ V+T +L T G+ +
Sbjct: 16 RYSHLLQPIRDMTKNWDIDVATQLEEYLQEIEKIQISFDGGKTSMNFAEAALLIQGSACIYSKKVEYLYTLVYQTLDLIASK--KRLQQAASVDEN---GQDKDTTFKEEDDFLSLDDI-KEAKNIDLKEDIDCLAESPLIPRTPLALIPLGEKERQDVLLSQTGEVLGSRNDFKMNTCCIHKSGALILDLAHLSLLDNSFSRLPTSTPQQAMAKETITDPKPVLEEQVVTDSQAQDISMIGPGDNHYDDDDDGNGCEDLAGDAIEEHAYDEQAEDVPEERMQLRQKHAPAVAALSKATSRDPWELLDPHAPKSNDEKPFRKGRPFKLPPSI-----LGMAKETKRKRKRTEANPSHPVLIPIHEFCAMAFHSHSSKFPKNPLKAPAMKEFEYLFWVEYRRRQELDKKQKKILAQYLTEEQFDELNAPDPEIDENEPFPQD-DYGDIGSNDQDDDEDEAGG--FCDPRHDDE--QTIVNIPPMALEEAAADVLVVSSYEDLVRKYVEGYLMEAQQYAQETDLSKRVRTWENKILPTLEEEEKHAPFDIHKYGEDVLHSFQDIFSIAEERVKP--FAEIMKSKEPFEICRYFLATLQLANNYNVEISVAGMADKGVDTMSLKLLHMTPGHAGISS 631
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A5J4Y9G7_9CHLO (Condensin-2 complex subunit H2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9G7_9CHLO) HSP 1 Score: 211 bits (538), Expect = 5.910e-57 Identity = 202/613 (32.95%), Postives = 287/613 (46.82%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEEDGAT-LPTRTPRGMLGAFAVERRGAGD----SFHIMASCMHAGGALLLDARRGMELSP--IAADVSAVHRIGFDDHQ--PV----------AGAAEGACAGAGSPIGNQNRLDFDD--DY--GDXXXXXXGGMGDGP-------ATPNVRPGRGGVRQAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLK-----DAGAIARYGMAKAVPQPLPAVKAANAHYHEFQYAVKADRRRKARERLA------TLRARQQAGVAGAALLYNDPA--------DEDSDGGSVA----DRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSAL-ESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQL---DGAHWLTHT-----PHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVLRSTE 1665
D +F+HLLQPIRDLAANWDI++A+ELE+Y+ LE + SF+GG NLNFAEAALLIQGS +Y KKVE L+ L+Y+ L+ + + +R+ +G A D D L+ EE+FL LDDVL+E ID+++ A R P +L + GD ++ I + MH GALLL+AR G L +++A + D Q P+ G AEG G D DD DY + GM D P + DP+ LDPH P KP K GR T K D + G +PA + + EF YA+K + + +RLA T R ++A + G+A + A +ED GG V+ DR Q + + E A +A GDR A ++ ++SYE L + HI+ F++ +T L+ RV++WR ++ PLL EQD RPAFDI YG V+ L++L D H + P F V +V R+F A LQL N+GN++++ + + P +L L TE
Sbjct: 6 DNKFAHLLQPIRDLAANWDINIANELEDYMDVLESVTFSFEGGP-NLNFAEAALLIQGSACVYGKKVEYLHTLVYQALEFIA-EKKRRASKGLSSQQAA----DTDDLDDEEQFLNLDDVLEEGTAIDMDQTSTTAIPAAVRPPAVLLALESTSSATGGDGDAGNYRIASCSMHHSGALLLEARDGEFLDEQLCYTNIAATTHLQQPDQQVRPMPEDASHDAMDTGNAEGYDGAEGCSHDFDGCGDGDDGVDYMQQEAAHLDHAGMPDQPQHFLQSSSXXXXXXXXXXXXXXXEFDPYAPLDPHVEGTLPIKPFKKGRKPTRRKRPKQADCQDVDALGCTLGT---IPAPTVSGCTFAEFNYALKLLQSSQQAQRLAAVRQMATTRGHKEAQL-GSAFTREEAAAGCADLDDEEDCAGGYVSGGMSDRGSEPGHNFPQDSMAELDEWAE--LAGAGDRAFASNGPPADGDADSMSYEELCQAHIEAFIQAAAAAEVQTELASRVSNWRYKIQPLLDEQDARPAFDIHLYGDQVLDKLARLSCRDPDHPVELQTSMVEPVGFEAVAGEESQAEVSRLFSAMLQLINNGNIQILPGQA-----QQPFQLRLLKTE 601
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: D7FKX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX7_ECTSI) HSP 1 Score: 214 bits (546), Expect = 7.710e-57 Identity = 215/702 (30.63%), Postives = 298/702 (42.45%), Query Frame = 1
Query: 10 RDGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMK------RSERGRGGGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEED-----------------------------------GATLPTRTPRGMLGAFAVERRGAGDSFHIMASC--MHAGGALLLD---------ARRGMELSPIAADVSAVHRIGFDDHQPVAGAAEGA-CAGAGSPIGNQN--------RLDFDDDYG---DXXXXXXGGMGDGPATPNVR-PGRGGVRQ-------------APRVDPWVSLDPHAAAGAPAKPLKVGRTYT----TLKDAGAIARYGMAKAVPQP---------------LPAVKAANAHYHEFQYAVKADRRRKARERLATLRARQQA-GVAGAALLYNDPADEDS----------------------DGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLS-ALESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLS------QLDGAHWLTHTPH---------------------------NFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVL 1653
R+ RF H+LQPIRDLA NWD+D+A+ LE+YL +LE + I+ DGG + +NFAEAALLIQGST +YS+KVE +Y L+ +T+ + Q +S+ G G G+D+ + E FL LDD++ E +ID+ G +P T M F +E+ G+SF M++C G LL++ A+ E S A +G + + A+G G+G +G + FD D+G D DGP TP GR +RQ AP +DPW +LDPH + A+P++ GRTY K G G AK + + +V Y EFQY +R+RKA + T ARQQA G G + A DS GG AD + D D P++L A + +YE L R+HI+ FMRG +KYA ET LSKRV W+ +++PL++ Q+ R AFDI YG V+S ++ Q AH H +F VV G++ FDVCR+FLA LQLAN+GNV L H + D TP +L L
Sbjct: 113 REERFKHILQPIRDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGSTCVYSRKVEHVYQLVQRTIDFLTQQKQXXXXXAAKSKSGDGD-----VGDDSIMGGDETAFLPLDDIILEGKHIDIGSTSSRSRNRRRSSIAPSSGFHGRGXXXXXXXXXXXXLPGGGDVPDITRPPM---FLMEQD-YGNSFK-MSTCAPQQLSGTLLIEGGALDDSLFAQGDAETSEAARACDFWRGLGREGDGGLKARADGERWTGSGMDMGGGDDXXXXXXXXXXFDGDFGPGDDFDDPRDDVPVDGPRTPEGSVSGRRELRQRESIEKEVLKADKAP-IDPWAALDPHDPGTSQARPIRKGRTYKIPAQVRKRRGGKKIQGEAKGGGEEQKGDGGSWVGRDGRVMLSVPLLGLAYPEFQYVWNRERQRKAAQ---TRLARQQARGFMGREDFLPESAPPDSAGMNDVGTDYDGYGSDGSYCSDGGGGYADYGDQSDGGXXXXXXXXXXXXXXXXXXXXXDAGVAPISLEDAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKGVHPKVADDAAASPEEAVQADTAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAADQETTPFRLEL 800
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A1Y1IAI4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAI4_KLENI) HSP 1 Score: 204 bits (518), Expect = 7.670e-53 Identity = 193/598 (32.27%), Postives = 262/598 (43.81%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGPRAPTGEDADILEQEEE--FLELDDVLQEADNIDLEEEEDGA----TLPTRTPRGMLGAFAVERRGAGD---------SFHIMASCMHAGGALLLDARRGM----ELSPIA--ADVSAVHRIGFDDHQPVAGAAEGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDGPATPNVR-------PGRGGV--------------------RQAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAHYHEFQYAVKADRRRKARERLATLRARQQAGVAGAALLYNDPADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAA-----PFIAT-VGDRTPLPLTLSALESSAV--------SYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDG-------AHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVEL 1599
+ RF HLLQPIRDLA NW+ID+A+EL +YL ELE + SFDGG + LNFAEAAL+IQGS IYSKKVE LY L+Y+ L + + KR+E G +G E+EEE FL LDD+ E IDL+E D T TR P L A ER G G ++ I + +H+ GALLLD R G +L PI+ A ++H G+ A+ A G + D D+D+G G GD P PG+ G +Q ++PW LDPH A +P K GR + A+ A P A + EF A +A RL R ++ G A D A G + DD+ P A +GD P A +S AV +YE L+R HID ++ +T+L+ RVA W+ +++P+L+EQD RP FDI YG V+ + G A F VV+G+ ++ R+F A LQL N+GN+ +
Sbjct: 14 ESRFIHLLQPIRDLAGNWNIDIAAELSDYLEELESITFSFDGGHSTLNFAEAALVIQGSACIYSKKVESLYGLVYQALDVIAKK--KRAEEA--GADLEASGNAIQDEEEEEEARFLLLDDIP-EGTGIDLDEVADEENPIFTAATRGPPAALLAMEDERMGPGGPGNMGGEAAAYKINSCTVHSSGALLLDPRDGDLLDDQLMPISFRASPPSLHPEGWSP-------AKTAPQNGGVDEATDHMDDDDNDFGGGGDNWDGPTGDPPGQEEAALGVADPAPGQAGAVDPGMQTRGAMQHGAPVQAEQQEEEINPWKQLDPHDPGTAVVRPYKRGRPVRRPQ-----AKRSAAVPAKAPYALAPARGVFFPEFAAAFQA--------RLRAERVSRREGAGNRATYRGDFAAFGEVAGEQENVLGSGDDWHAAXXXXXXXXXXXXXDYEPVDAIEMGDGGDRPFYFGA-DSGAVGPPGEAEKTYEDLVREHIDAMLKAAAAAEVQTDLAARVATWKHKIEPVLQEQDARPEFDIHLYGARVLDAATATAGPPSEDERALTSAEVVVPFTEVVKGQPKHEISRLFAAMLQLINNGNLSV 585
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A2K6EKE9_PROCO (Condensin-2 complex subunit H2 n=11 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6EKE9_PROCO) HSP 1 Score: 197 bits (502), Expect = 3.490e-52 Identity = 202/641 (31.51%), Postives = 280/641 (43.68%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTV----QMQTMKRSERGRGGGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEE---DGATLPTRTPRGMLGAFAVERRG------------AGDSFHIMASCMHAGGALLL---------------------DARRGME-LSPIAADVSAVHRIGFDDHQPVAGAAEGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDGPATPN---------------VRPGRGGV-----RQAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIA-----RYGMAKAVPQPLPAVKAANAHYHEFQ---YAVKADRRRK-----------------ARERLATLRARQQAGVAGAALLYNDPADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVET-PLKLVLRSTERRR 1674
+ RF+HLLQPIRDL NW++DVA++L EYL EL+ + ISFD GKT +NF EAALLIQGS +YSKKVE LY L+Y+ L + + + + + R G A +G LE E+EFL LDD N+DL+ ++ + T+P P ++ +E+ + F + H GA +L DA R E L ++A S V +GF H+P G P G D+D + P P + RGG R DPW SLDP + + KP K GR Y+ A R G AK +H++ YA ADRRR RE+L TLR Q+ + L P++ED S+ D DDF ++ PE A P + D +P +LS YE L+R ++++F+ K+ ET LS+RV +W + PLL+EQ+ FDI TYG V+S QL+ W F +V G+ +F+VCR LA LQLAND VE+ AV+T L+L+ RR
Sbjct: 5 EARFAHLLQPIRDLTKNWEVDVAAQLGEYLEELDQICISFDEGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKRRAKQLSAVQEDRANGD-ASSGAS---LEAEDEFLSLDDFPDSRANVDLKNDQAPSEVLTVPL-LPMALVAPDEMEKNNFPLYSRQGEVLASRKDFRMNTCTPHPRGAFMLEPVGTSSVEPVGMSPMPRSQQDAERAEEQLMEVSACGSPVPMLGFS-HEP------GTSPEGPMPSGRGE----DEDAEEAGELPEATAPQAPLEPEEPRSLQQSAALPRRYLLRERGGAPEPVSRLKETPDPWQSLDPFDSLDS--KPFKKGRPYSVPPCVEAAPGQKRKRKGAAKLQD------------FHQWYLAAYADHADRRRPRQKGPSFADMEVLYWEHVREQLKTLRKLQRREMGKQWLR---PSEEDRLEDSLEDLGAAADDF-LEPEECVEPEGANPRESAALDAEAMPASLS--------YEELVRRNVELFIATSQKFVQETELSQRVREWEDTVRPLLQEQEQHLPFDIHTYGDQVVSQFPQLN--EWCP-----FAKLVAGQPAFEVCRSMLASLQLANDYTVEIAQQPGLETAVDTMSLRLLTHQRAHRR 596
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: A0A1S3W6U5_ERIEU (Condensin-2 complex subunit H2 n=5 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3W6U5_ERIEU) HSP 1 Score: 197 bits (501), Expect = 4.900e-52 Identity = 196/637 (30.77%), Postives = 286/637 (44.90%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTV-------QMQTMKRSERGRGGGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEEDGATLPTRT------PRGMLGAFAVERRGAGDSFHIMASCM-----------------HAGGALLLDARRGMELSPIAADVSAVHR-IGFDDHQPV-----AGAA---------EGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDG-PATPN---VRPGRGGVRQAPRV-----------DPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAH-YHEFQYAVKADRRRK-----------------ARERLATLRARQQAGVAGAALLYND----PADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVET-PLKLVLRSTERRR 1674
+ RF+HLLQPIRDL NW++DVA++L EYL EL+ + ISFD GKT +NF EAALLIQGS +YSKKVE LY L+Y+ L + Q+ + + E R P E E+EFL LD++ ++DL + +P+ P ++ +E+ S H + SC H GA +L+ + +SP+ + + G + QP+ AG A E A SP G R + DD D +G P++P +P + +R+ V DPW +LDP + + KP K G+ Y+ A + K A K + H ++ Y+ AD RR RE+L TLR Q+ +A + P +ED S+ D DDF PE A G R P+ L+ ++SYE L+R ++++F+ K+ ET LS+R+ DW + PLL+EQ+ FDI TYG V+S SQL+ W + F +V G+ +F+VCR LA LQLAND VE+ AV+T L+L+ +R
Sbjct: 5 EARFAHLLQPIRDLTKNWEVDVAAQLGEYLEELDQICISFDEGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKKRAKQLSSAQEDEANWATNSRPPQ-------EVEDEFLSLDELPDTRASVDLR----SSQVPSEVLIIPLLPMALVAPDELEK-----SSHPLYSCQGEVLASRKDFRMNTCTPHPRGAFMLEP---VGMSPVETLLPKNQKEAGRTEEQPMEVSLCAGPAPMLSNCPEQEPEQAADPSPEGPLPRGEDDDVEEDMAEPFEAPVGPPEPSSPQQSAAQPRKYMLRERQEVLDHASRVKETSDPWQNLDPFDSLDS--KPFKKGKPYSVPPSVEATGQKRKRKG------ATKLQDFHQWYLAAYSDHADSRRPRQKGPSFADMEVLYWKHVREQLETLRKLQRREMAEEQWPRAEEGLWPEEEDHQDDSLEDLGVAADDFL-------EPEGCA---EPEGARLEEPVDLAEDMPKSLSYEELVRKNVELFITSSQKFVQETELSQRIRDWEDTIQPLLQEQEEHVPFDIHTYGDQVVSKFSQLN--QW-----YRFSDLVAGQPAFEVCRAMLATLQLANDHTVEITQQPGLEAAVDTMSLRLLTHQRAHKR 597
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: UPI0014029170 (condensin-2 complex subunit H2 isoform X2 n=3 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014029170) HSP 1 Score: 196 bits (497), Expect = 1.790e-51 Identity = 190/607 (31.30%), Postives = 285/607 (46.95%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRG-GGPRAPTGEDADILEQEEEFLELDDVLQEADNIDLEEEEDGATLPT---RTPRGMLGAFAVERR------------GAGDSFHIMASCMHAGGALLLDARRGMELSPI-AADVSAVH-RIGFDD-HQPVAGAAEGACAGAGSPIGNQNRLDFDDDYGDXXXXXXGGMGDGPATPNVRPGRGGVRQAPR--------------------VDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDAGAIARYGMAKAVPQPLPAVKAANAHYHEFQYAVKADRR------------RKARERLATLRARQQAGVA--GAAL--LYNDPADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESSAVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVETPLKLVLRSTER 1668
+ RF+HLLQPIR+L NW+IDVAS+LEEYL EL+ + ISFD GKT +NFAEAA+LIQGS IYS+KVE LY L+Y+ L + + KR+++ G A D + E EFL LDD+ N + + G+T+ TP ++ + +E++ G+ F + HA GA +L+ ++ + + +A H + G D Q + E + GA P+ + + DDD GD + + GV +A R +DPW SLDP AA KP K GR + I K + K A Y+ Q VK+ R+ + +ERL R QQ +A G + L + D + + + D+AE D + +G + + I + +P+ L L ES VSYE L+R ++++F+ +YA ET LS RV DW ++ P L +++ R AF I YG ++ L + +F +V G++SF+VCR LA LQLAND VE+ ++V+T ++L L S R
Sbjct: 5 ESRFAHLLQPIRELTKNWEIDVASQLEEYLEELDQICISFDDGKTTMNFAEAAMLIQGSACIYSRKVEYLYSLVYQALDLISNK--KRNQKASSIGVDGADNDLSLDNQKAEWEFLSLDDIECPTKNSINLQNDVGSTVVNIIPLTPMALIPSEELEKKNNPLLSRRGEILGSRKDFRMNTCTPHASGAFMLELNNASPMNYLNRQENNAEHNKNGLQDVAQDMV--IENSDCGAPVPVLHFSDAGSDDDGGDVDDCFLPPLPEQNMDQEHVAHLKGVPEARRYMLREKQVMEIDPTHRKQEVLDPWRSLDPFAATQD--KPFKKGRHFFIPSCINVIGSKRKRKNFGKLKEFGKWFCATYYGGQSDVKSKRKGPMFADMEVLYWKHMKERLGAQRKYQQRMIALRGRVIEELEIEAGDVEEELNDLQDQAE--DHLDYEGVEDDI-DLEHEVIGPQDNHSPMKLDLLG-ESGGVSYEELVRRNVELFIANSQQYAQETALSLRVKDWEDKIGPRLVKEEERAAFAIHDYGDRIVDALDYIKQR-------LSFANIVAGKESFEVCRYMLASLQLANDYTVEIWERDGLYESVDT-MELTLLSKVR 593
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Match: UPI0018D74054 (condensin-2 complex subunit H2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D74054) HSP 1 Score: 196 bits (497), Expect = 2.620e-51 Identity = 198/625 (31.68%), Postives = 284/625 (45.44%), Query Frame = 1
Query: 13 DGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNLNFAEAALLIQGSTLIYSKKVECLYDLIYKTLQTVQMQTMKRSERGRGGGPRAPTGEDADILEQE--EEFLELDDVLQEADNIDLEE---EEDGATLPTRTPRGMLGAFAVERR-----------GAGDSFHIMASCMHAGGALLLDARRG--MELSPIAADVSAVHRIGFDDHQPVAGAAEGACAGAGS--------PIG-NQNRLDFDDDYGDXXXXXXGGMGDGP---------ATPNVRPGRGGVR--------QAPRVDPWVSLDPHAAAGAPAKPLKVGRTYTTLKDA-GAIARYGMAKAVP-----QPLPAV-----KAANAHYHEFQ---------------YAVKADRRRKARERLATLRARQ---QAGVAGAALLYND--PADEDSDGGSVADRAEYDDDFEIQGTPFGMPEAAAPFIATVGDRTPLPLTLSALESS---AVSYEMLLRHHIDVFMRGCDKYAAETNLSKRVADWRGRMDPLLKEQDVRPAFDIETYGGDVISNLSQLDGAHWLTHTPHNFHYVVEGRDSFDVCRVFLACLQLANDGNVELVHNASTVDAVET-PLKLV 1650
+ RF HLLQPIRDL NW++D+AS+LE+YL E+ + I+FDGG T++NFAEAAL+IQGS IYSKKVE LY L+Y QT+ + K+ + + +DA Q+ EEFL LDD+ Q A NIDL+E ++ + RTP +L +E G F +M S + A G LLLD +E S + +S P+ G +G A G+ P+G N + + D M D P PN GR +R +AP VDPW +LDPH A P KP K G+ + A ++ K +P QPL + KA +H +F Y + R++ AR++ + A+Q Q A ND PA E+ G A+ A +D E F GD + + S+ SYE L+R H++ +M +Y T L +RV W R+ P+L ++ FDI YG V+ L +++ T F ++E R + D+ R+FLA LQLAN NVE+ + DA++T LKL+
Sbjct: 7 EARFLHLLQPIRDLTKNWEVDIASQLEDYLLEIGEIRITFDGGSTSMNFAEAALVIQGSACIYSKKVEYLYALVY---QTLDLLASKKKLQQQSSVDEEGNDKDATFAYQKNAEEFLSLDDI-QIAKNIDLKEVDLNDNLVKIVPRTPMSLLKVNGLEEDVPLKDSKGEVLGKMADFRLMTSVVQASGTLLLDMSHMSLLEASMMRHPMST----------PLPGPLQGNNANDGNGFPDNAVEPMGDNVDEMPLHQDANMSLDDVD--MADPPDESFTEPPHPEPNQMEGRRELRPLRIQPKLKAPAVDPWTTLDPHEAKALPEKPFKKGKPFKIPASLLAANSKKRKRKGLPEKPQTQPLTPICQFINKAYYSHASKFPNSALKRPLFPEFDNLYYAEFKRQQAARKKEKEILAKQGRFQELAEQEAEEENDFNPAPEEGPLGG-AELAGMEDYGGAGLDDVDDDEGGGGFDGMAGDFGAVDRSGGEFPSTQEIVTSYEELVRKHVEAYMISAQQYTQVTELGRRVQAWEDRISPILHREEKFGFFDIHEYGTIVLDRLEEVEKKEQKTGQAIPFSKLMEDRHAHDISRLFLATLQLANVYNVEIDSRGTDEDAMDTMSLKLL 614 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10480.676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10480.676.1 >prot_S-firma_F_contig10480.676.1 ID=prot_S-firma_F_contig10480.676.1|Name=mRNA_S-firma_F_contig10480.676.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=563bp MAGRDGRFSHLLQPIRDLAANWDIDVASELEEYLTELEGLVISFDGGKTNback to top mRNA from alignment at S-firma_F_contig10480:1863..4268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10480.676.1 ID=mRNA_S-firma_F_contig10480.676.1|Name=mRNA_S-firma_F_contig10480.676.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2406bp|location=Sequence derived from alignment at S-firma_F_contig10480:1863..4268+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10480:1863..4268+ >mRNA_S-firma_F_contig10480.676.1 ID=mRNA_S-firma_F_contig10480.676.1|Name=mRNA_S-firma_F_contig10480.676.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3378bp|location=Sequence derived from alignment at S-firma_F_contig10480:1863..4268+ (Sphaerotrichia firma ET2_F female)back to top |