mRNA_S-firma_F_contig1047.662.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: D7FVR2_ECTSI (ARL6, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR2_ECTSI) HSP 1 Score: 190 bits (483), Expect = 2.820e-59 Identity = 111/204 (54.41%), Postives = 120/204 (58.82%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNK----------------------------------------------------------------------------VKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQSTAGRRGTTEKRRLSGSSHK 384
MGLFKKIASAMGR RGN+RILVVGLDNSGKSTLIEHIKPNK V++SGMPILVYANKGDLPGS+S QECADELGL+GLN+EQTPWHIE+S+ALVG GVEEGVNWLVQTLQS +GRR TTE RR SGS HK
Sbjct: 1 MGLFKKIASAMGRSRGNMRILVVGLDNSGKSTLIEHIKPNKASTFEATPTVGFQVQEFAKNNLNFTVIDMSGQSRYRTLWEHYFCNVHAVIFVVDSTDRVRMCVAKEELEEVLKHDEVQNSGMPILVYANKGDLPGSMSRQECADELGLSGLNDEQTPWHIEKSNALVGLGVEEGVNWLVQTLQSASGRRETTEGRRSSGSGHK 204
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A0W8DJ51_PHYNI (Coiled-coil domain-containing protein 22 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJ51_PHYNI) HSP 1 Score: 105 bits (262), Expect = 1.190e-26 Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNK-----------------------VKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQSTAGRR 342
MGLFK +A+A+G + +RILVVGLDNSGK+TL+ H+KP K + S +PIL +ANK DLP S++P EC L L L ++ WHI S+A+ G GVEEG+ WL R+
Sbjct: 1 MGLFKVLANALGLKKTQVRILVVGLDNSGKTTLVNHLKPKKNSTDTIRMCVAKDELEQLVEHKELSSKKVPILFFANKMDLPNSLTPVECMQHLELDSLGSKS--WHITASNAVTGRGVEEGIEWLADQFAKGKSRK 135
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A835YUJ0_9STRA (ADP-ribosylation factor family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.060e-19 Identity = 57/184 (30.98%), Postives = 81/184 (44.02%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNK----------------------------------------------------------------------------VKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQ 324
MGLFKK+A+A+G + RI+VVGLDNSGK+TLI +IKP K V +S PIL++ANK DLPG++S +C ++L L ++N+ PW IE S+AL G G++ G+ WL + L+
Sbjct: 1 MGLFKKLATALGLSKYEARIVVVGLDNSGKTTLINNIKPKKASTFEVTPTVGFQVESFAKDNLNFTIFDMSGQSRYRELWGHYYREVQAIIFVLDCTERVRMCVAKEELDELLTHPDVSNSCTPILIFANKMDLPGALSAVDCMEQLDLQRISNK--PWQIEASNALTGEGIDRGLEWLAEKLR 182
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A3R7EJ99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EJ99_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.320e-15 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQSTAGRR 342
MGLFKK+A+++G + ++RILVVGLDNSGK+TL+ H+KP K++S V+P T N T + + S+A+ G GVEEG+ WL L R+
Sbjct: 23 MGLFKKLANSLGMKKQSVRILVVGLDNSGKTTLVNHLKPKKLQSH---------------EVAPTVGFQVEEFTKYNLSFTVFDMA-SNAISGHGVEEGIQWLADQLGKAKSRK 120
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A7S2VZV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2VZV4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.400e-14 Identity = 51/181 (28.18%), Postives = 74/181 (40.88%), Query Frame = 1
Query: 7 LFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKSSGM----------------------------------------------------------------------------PILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTL 321
+F ++A+A G + + R+LVVGLDNSGK+T+I + P+K S+ + PIL YANK DLPG++ P E +EL L + N+ PWHI + AL G+G+EEG+ WLV +
Sbjct: 1 MFSRLAAAFGWSKQDARVLVVGLDNSGKTTIINSLNPSKSTSAEVVPTVGFQVEEFTKSNVNLTVFDMSGQSRYRSLWEHYYLEVQAIIFVLDSADRVRMCVAKDELCSLLGHREFQGRPIPILFYANKMDLPGAMEPVEIVEELELHTIENQ--PWHIMHTDALSGTGIEEGLRWLVDAV 179
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: UPI00063FC8B8 (ADP-ribosylation factor-like protein 6 n=1 Tax=Propithecus coquereli TaxID=379532 RepID=UPI00063FC8B8) HSP 1 Score: 75.1 bits (183), Expect = 3.000e-14 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKSSGM----------------------PILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWL 309
MGL K++ +G + + +L +GLDNSGK+T+I +KP+ +S + PIL +ANK DL +V+ + + L L + ++ PWHI S A+ G G++EGV+WL
Sbjct: 1 MGLLDKLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSRYIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDK--PWHICASDAIKGEGLQEGVDWL 123
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A4E0RKV9_FASHE (GTP-binding ADP-ribosylation factor n=3 Tax=Fasciolidae TaxID=27843 RepID=A0A4E0RKV9_FASHE) HSP 1 Score: 70.9 bits (172), Expect = 5.300e-13 Identity = 39/142 (27.46%), Postives = 68/142 (47.89%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKSS---------------------------------GMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQS 327
MGL + + +RIL++GLDN+GK+T+++H+ + + G+P +V+ANK DL + S + +D LGL L PW I+ SAL G G++EG+ W+++++ +
Sbjct: 1 MGLLNLLRKLKSKPDQEVRILLLGLDNAGKTTILKHLASEDISQTTPTQIYVIDSADKKRFEETGEELSELLAEDKLVGVPFIVFANKQDLLTAESADKISDALGL--LTIRDRPWQIQGCSALTGKGIQEGMEWVIKSVNT 140
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: C9SPA4_VERA1 (ADP-ribosylation factor 1 n=1 Tax=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) TaxID=526221 RepID=C9SPA4_VERA1) HSP 1 Score: 69.3 bits (168), Expect = 1.590e-12 Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKP------------------------NKVKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTLQSTA 333
MG S M + IRIL++GLDN+GK+TL+ +KP N+ + +LV+ANK D PG+ + ++ L L L + W I SA+ GSGV EG++WLVQT+ A
Sbjct: 1 MGASMSWLSGMLFSKKEIRILILGLDNAGKTTLLYRLKPSSSSFDSTDIERLQTAADELGAMLNEDELKDAALLVFANKQDQPGAKGAGDISEALRLGELRDRN--WTIMACSAVDGSGVNEGMDWLVQTVNQEA 133
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: A0A7S3H1V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1V6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.760e-12 Identity = 50/179 (27.93%), Postives = 71/179 (39.66%), Query Frame = 1
Query: 1 MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNK----------------------------------------------------------------------------VKSSGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWL 309
MG F I++A+G + R+LV+GLDNSGK+TLI H+KP K +K + PI+ +ANK D+ GS+ P EC +ELGL + ++ W I S+AL G GV+ G+ WL
Sbjct: 1 MGFFSMISNAIGWSKKG-RVLVIGLDNSGKTTLIHHLKPKKAATFEVTPTVGFQVEEFSKNNVNFTVYDMSGQGRYRNLWEHYYSDVEAIIFVLDSTDRLRMCVAKEELDQLLAHEEIKKTAAPIVFFANKRDVAGSMGPDECTEELGLDRIRDKA--WSIWPSNALSGEGVDAGIEWL 176
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Match: O22694_ARATH (Putative ADP-ribolylation factor n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=O22694_ARATH) HSP 1 Score: 68.6 bits (166), Expect = 1.970e-12 Identity = 41/109 (37.61%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 1 MGL-FKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKS-SGMPILVYANKGDLPGSVSPQECADELGLTGLNNEQTPWHIERSSALVGSGVEEGVNWLVQTL 321
MGL F K+ S + + +RIL+VGLD +GK+T++ +K ++ +LV+ANK DLP +++ E D+LGL L Q W+I+ + A G G+ EG++WL +
Sbjct: 1 MGLSFAKLFSRLFA-KKEMRILMVGLDAAGKTTILYKLKLGEIDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR--QRHWYIQITCATTGEGLYEGLDWLSNNI 106 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1047.662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1047.662.1 >prot_S-firma_F_contig1047.662.1 ID=prot_S-firma_F_contig1047.662.1|Name=mRNA_S-firma_F_contig1047.662.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=129bp MGLFKKIASAMGRFRGNIRILVVGLDNSGKSTLIEHIKPNKVKSSGMPILback to top mRNA from alignment at S-firma_F_contig1047:11034..13438+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1047.662.1 ID=mRNA_S-firma_F_contig1047.662.1|Name=mRNA_S-firma_F_contig1047.662.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2405bp|location=Sequence derived from alignment at S-firma_F_contig1047:11034..13438+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1047:11034..13438+ >mRNA_S-firma_F_contig1047.662.1 ID=mRNA_S-firma_F_contig1047.662.1|Name=mRNA_S-firma_F_contig1047.662.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=774bp|location=Sequence derived from alignment at S-firma_F_contig1047:11034..13438+ (Sphaerotrichia firma ET2_F female)back to top |