mRNA_S-firma_F_contig10465.657.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.900e-104 Identity = 183/409 (44.74%), Postives = 245/409 (59.90%), Query Frame = 3
Query: 132 QKRKNFNVLEREEVIRYLLAS-SKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAG 1355
Q N ER +V LL S++G HGSFK+ ++F C W TI RIW + E+ IG+ K GRK + L R+ IP +RTT +R+A+ + +P T+L K L H + LKP LT RL+W ++ G V D +VH+DEKWFY+ R + YL GEEPP R QSKRFITK+MFL+AVARPR N + FDGKIG W FT+ VPA RNSRNR +G +VT V V+++ Y+ L+ VIPAIK KWP A R + I +QQDNA+PH ++ +L A ADG+DI + QP NSPD N+LDLGFF +IQSLQ+RTR RTID+L+ AW D +TL+ + +LQ+ M + + G+N YK+PH++K + G
Sbjct: 3 QPEANLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRKKKYTD-LAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV-----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQG 404
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 318 bits (816), Expect = 1.100e-100 Identity = 183/432 (42.36%), Postives = 254/432 (58.80%), Query Frame = 3
Query: 144 NFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVE-VTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAGTPIPRRYPISDEAWTKG----RAALAA 1424
N +R+ ++ +LL S G G A K+ H TI R+W H++ + + + + G CGRK ID + LR ++ IPL+ R T + LAAALG+ T + LK R H + +KP LT + R+++ L R GG V D D VH+DEKWF D + +YL EE P+R+ QSKRFI+K MF+AAVARPR++ FDGKIG+WAF ++ A R S+NR G +V + VE V +E YK I +IPAIK KWP + + TI++QQDNAKPH D+ D++ AG + G+DI++ QP NSPD N+LDLG+F SIQSLQ +T R ++ LL V A++ TL+K++ +LQ ME I+ NG N YK PH KDA +AG +P + S E + +G RAAL A
Sbjct: 5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKR-GGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAGQ-LPVSFACSAEVYDQGVKFVRAALEA 434
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 309 bits (791), Expect = 3.750e-97 Identity = 174/410 (42.44%), Postives = 250/410 (60.98%), Query Frame = 3
Query: 138 RKNFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRV--LHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCV-EVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPH-RVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAG 1355
+KN V +R + LL +S G Q G+ +F T+ RIWH+ + + G P + +N GRK + ++ ++LDIPL R+ R LA L + ++T+ +K LR H N +KP LT + + RL + L ++I+RS + HD + +H+DEKWFY+ + +R+YL GE+ P+R QSK+FITK+MFLAAVARPR + + N F GKIG++ FT+ PA R+S+NR AG + TK + VTKE + LIE V+P I+ KWP + IF+QQDNAKPH VND E LEA + DGFDI+L QP+NSPD N+LDLGFF +IQSLQ++ TID+L+ V+ A+ K L+ V+ +LQ M +I+ G N Y++PH+ K+ R G
Sbjct: 10 KKNTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLP-VVLSSNMAKVVGRKRVQVDF--NQVLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCL--SKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRS-HVGPIFIQQDNAKPHIDVNDNE-FLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREG 412
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.450e-96 Identity = 170/401 (42.39%), Postives = 242/401 (60.35%), Query Frame = 3
Query: 144 NFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDI-ETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALG-LRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDA 1340
+ ER LL SS G ++G+ K+ F CHW+TI R+W + G P A + + KG GRK + + + +P ++R T R LAA G+P+T++ +++ L++ +++KP LT D K RL + + R+ SG + D ++VHVDEKWFYL R ++FY+YD EE +R V+SK+FITK+MFLAAVARP+++ N++FDGK+G+W F PA RNS+NRA GA V V + YKK +I+ VIPAI E++P T + +QQDNA PHR E L + G I++ NQP NSPD N+LDLGFF SIQSLQ + R+I++L+ VE A+ + TLSK + +LQ M+ + G N YKLPH+RKDA
Sbjct: 11 HLTPTERRAAYELLLQSSTNGRLKYGALKEVATYFKCHWKTISRVWKRGRLSLSDGSPHADVDSKLKGNSGRKKSRLADDFEGAIKAVPQHQRQTLRSLAAHCGLPKTSIVRHMQETKRLKSRASYVKPMLTEDNTKARLDFAKSFVRLLPSGNHAFV-DMNEYVHVDEKWFYLTRVKRKFYVYDDEEVALRAVKSKQFITKVMFLAAVARPQYDHTRNAYFDGKVGVWPFVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAILERFPPRTLARGVVIQQDNASPHRCVTTEVLAQRGLEK---IRVENQPPNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELIGAVEAAFYELPMDTLSKTFITLQKVMQTSIEMLGSNNYKLPHMRKDA 407
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A6A4Z2A3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2A3_9STRA) HSP 1 Score: 308 bits (788), Expect = 6.070e-96 Identity = 169/403 (41.94%), Postives = 240/403 (59.55%), Query Frame = 3
Query: 138 RKNFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDI-ETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALG-LRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDA 1340
RK+ + R LL+ + +GV G+ + + F CH TI R+W + G +A + + KG GR + + + A + ++P +R T R L+AA GIP TT+F ++K +A N++KP+LTP +ERL++ + + R SG + D ++VHVDEKWFYL + +R+Y+YD EE R V+SKRFITK+MFLAAVARPR++P +DGK+G+W F + PA R S+NR GAMVT V Y ++ V+PAI+EK+P R + +QQDNA PHR E L G I + NQP NSPD N+LDLGFF SIQSLQ + RTI++L+ VE A+ + TL+K + +LQ ME + +G N YKLPH++KDA
Sbjct: 53 RKHLSFAHRRTAYETLLSVAVDGVLPRGALTELAQMFRCHPRTISRLWTQARLSLRGGHCAADVASKTKGNSGRHALRTSDEIEAAIRNVPQMQRQTLRSLSAACGIPMTTIFRHMKKNPRFKARSNYVKPHLTPANIEERLKFAMSFVRPLPSGR-HLFDDMHNYVHVDEKWFYLTKVKRRYYVYDDEEVAARAVKSKRFITKVMFLAAVARPRYDPHGKKEWDGKVGVWPFVQVAPAQRGSKNRPKGAMVTTPQSVDAPLYFNTILNKVVPAIQEKFPRCGRRGNVLIQQDNASPHRNVTTEKLCAHGVCG---IGVANQPPNSPDFNVLDLGFFNSIQSLQYQKCTRTIEELIVAVENAFYELPTDTLAKTFVTLQKVMELSIEIHGSNEYKLPHMKKDA 451
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA) HSP 1 Score: 308 bits (788), Expect = 8.090e-96 Identity = 174/432 (40.28%), Postives = 256/432 (59.26%), Query Frame = 3
Query: 141 KNFNVLEREEVIRYLLAS-SKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQR-EEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAGTPIPRRYPISDEAWTKGRAALAALE 1430
KN + +R V+++LL + + + HG+F FG T++ IW + + P + + + KG CGR + E++ +RL +P +RTT R +AAAL +P++TL K + + ++P LT R++W L + A + V D D+VHVDEKWF+ + +YL GEEPP R +SK+FITK+MFL+AVARPR + A FDGK+G W FT KVPA R SRNR AG +VT V VT+ YK L++ VIPAIK KWP+ T I +QQDNA+PH + D++ A T+DG+ +++ QP NSPD NILDLGFF +IQSLQ + +R IDD++ E AW + ATL+ + +LQ +++++ G+N YK+PH++K A A G +P+ P+ + G LA +
Sbjct: 26 KNLSNSDRTAVLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGRN-LKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVH-ALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRMGGNNNYKIPHMKKAALAARGM-LPQVVPVESDVIESGLNLLAVTD 453
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS) HSP 1 Score: 305 bits (780), Expect = 1.990e-95 Identity = 169/420 (40.24%), Postives = 250/420 (59.52%), Query Frame = 3
Query: 99 DMSAAGSASQGQKRKNFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCV-EVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAG 1355
D+ + S++ +K +R+++ LL S+ G + G + + F + ++++RIW + E G + + G GRK I + ++ ++PL RT+ R LA A+ +PQTTLF +K +R H +KP+LT +G K RLR+ + V + ++VH+DEKWF+L R+ +R+YL E P+R +SKRFITK+MFLAAVARPR + N F GKIG++ FT K PA R+S+N AG + TK + VTKE + LI+ V+PAI+ KWP TIF+QQDNAKPH + + ++A DGFDI+L QP NSPD N+LDL +F SIQSLQ + TID+L+ VE ++ P +L++++ SLQA M +I+ +G N YK PHL K+ R+G
Sbjct: 2 DIPMSHSSAHPISQKKLTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENG-VAVDVSRRLHGRVGRKRIHFDV--NKVSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPHYDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGGNHYKQPHLGKNKLMRSG 418
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 305 bits (781), Expect = 2.720e-95 Identity = 176/395 (44.56%), Postives = 236/395 (59.75%), Query Frame = 3
Query: 159 EREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKH-EQREEAGDPSAYIGNNRKGTCGR-KGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKD 1337
+R V LL + G HG K + F +TI RIW + E G A +G+ +KG CGR + E +R+ + P + R R +A A G+P+T L+ +KA L + L+P LTP R + + R G R HD D VH+DEKWFY+ + +RFYL+ E P RK QSKR ITK+MFL AVARPRH+ A +DGK+GLW F + A R S+NR G VT + VTK Y++ L++ VIPAI+ +WP R TI+VQQDNAKPH D+ ++L AG +G++IQL+ QPA SPD N+LDLGFF +IQSLQ +T ARTIDDL++ VE A+ L K + +LQ ME+ + +GDN YKLPHL+KD
Sbjct: 14 QRSAVYHRLLQLKRNGRVGHGEMKNLMQSFNISQQTISRIWRRGCETAASLG--VAKVGSQKKGRCGRPRKYKDEDVRSAVTSAPAHLRGNYRTMAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGR-RQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGR-RGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKD 404
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA) HSP 1 Score: 301 bits (770), Expect = 4.760e-94 Identity = 168/432 (38.89%), Postives = 245/432 (56.71%), Query Frame = 3
Query: 138 RKNFNVLEREEVIRYLLAS-SKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCVEVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAARAGTPIPRRYPISDEAWTKGRAALAALE 1430
+ NF +R +V +LL +++G +GSF+ +F C+W+T+ R+W + + + + +KG GRK + L R+ IP +RTT + +A + +P++TL K L H + +KP LT RL+W R G ++HD D+VHVDEKWFY+ R + YL GEEPP R +SKRFITK+MFL+AVARPR N TN FDG+IG W FT+ VPA R+SRNR + MVT VT++ Y+ LI+ VIPAIK KWP + I +QQDNA+PH +E + A +DG+ I+++ QP NSPD N +LQ+RTR +TID+L+ AWT D TL+ + +LQ + +++ G N YK+PH+ K A+ G +P + + G AA+ A +
Sbjct: 8 KPNFTPQQRTDVCHHLLTLVARDGKLPYGSFRNVAAQFACNWQTVARLWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFE-----RLGPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPN-DKAARILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMN-----------TLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVRAGGGNNYKIPHMGKKKLAKQGL-LPESVECPRDVFNFGHAAIGATD 420
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Match: UPI002008F387 (uncharacterized protein LOC125210222 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002008F387) HSP 1 Score: 299 bits (766), Expect = 1.100e-92 Identity = 164/403 (40.69%), Postives = 236/403 (58.56%), Query Frame = 3
Query: 144 NFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGCHWETIKRIWHKHEQREEAGDPSAYIGNNRKGTCGRKGIDIETLRARLLDIPLNERTTQRRLAAALGIPQTTLFYNLKALGLRAHKNFLKPYLTPDGCKERLRWVLRWARIARSGGGRVLHDFEDFVHVDEKWFYLFRDGQRFYLYDGEEPPIRKVQSKRFITKIMFLAAVARPRHNPATNSHFDGKIGLWAFTKKVPAVRNSRNRAAGAMVTKCV-EVTKEEYKKKLIEGVIPAIKEKWPAATRHNTIFVQQDNAKPHRVNDEEDLLEAGTADGFDIQLINQPANSPDTNILDLGFFASIQSLQDRTRARTIDDLLREVEIAWTKADPATLSKVWTSLQASMEQILLCNGDNTYKLPHLRKDAAAR 1349
+ + E+ ++++L + G HGS K A KF H T+ R+W + E G+P G T + ID++ + R L + ER++ R+LA + + +TT KA +R H N +KP LT R+RW L + + G + H + VH+DEKWFY+ + R+YL E+ P R +SKRFITK+MF+ AV+RP + FDGKIG++ FT++VPA R S+NR G + TK + V KE ++ L+ +IPAIK KWPA I++QQDNAKPH + + A + DGF LI+QPANSPDTN+LDLGFF +IQSLQD A ID+LL V ++ + P TL+KV+ +LQ+ + +IL +G N YK+PHL KD +R
Sbjct: 48 SLSSQEKNLIVQFLQQQCRAGALPHGSLKDAANKFKVHPRTVSRLWRIASHQMEQGEPVVMKGKASGYTKTKGKIDLDEDKFRHLS--MLERSSIRKLAIKMQVSKTTAGRWSKANKIRPHTNAIKPALTDANKISRMRWCLTHIQPTIAEGKLLYHAMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRFITKVMFMCAVSRPMFGSDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWPA-NASKEIYIQQDNAKPHLTSSDFQFEAAASTDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFEELTPQTLNKVFLTLQSCLSKILEVHGGNNYKIPHLNKDRLSR 447 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10465.657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10465.657.1 >prot_S-firma_F_contig10465.657.1 ID=prot_S-firma_F_contig10465.657.1|Name=mRNA_S-firma_F_contig10465.657.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=459bp MSAAGSASQGQKRKNFNVLEREEVIRYLLASSKEGVRQHGSFKQAGEKFGback to top mRNA from alignment at S-firma_F_contig10465:1976..3453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10465.657.1 ID=mRNA_S-firma_F_contig10465.657.1|Name=mRNA_S-firma_F_contig10465.657.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1478bp|location=Sequence derived from alignment at S-firma_F_contig10465:1976..3453+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10465:1976..3453+ >mRNA_S-firma_F_contig10465.657.1 ID=mRNA_S-firma_F_contig10465.657.1|Name=mRNA_S-firma_F_contig10465.657.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2754bp|location=Sequence derived from alignment at S-firma_F_contig10465:1976..3453+ (Sphaerotrichia firma ET2_F female)back to top |