mRNA_S-firma_F_contig10452.642.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A7S1C3J7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3J7_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.220e-45 Identity = 86/184 (46.74%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 58 VEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNL--EDFDENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVG-GMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDTW---PSWMMRR 591
VEVGV + +E LL+ S WV FGVDPW+ SNY+D N+ + + + T RF + L+R +S +AA F DG +D VYIDARHDY S D A+W KLR GGIL+GHDFLDA + RL +G DW+V+ +G+ P+ AVR AV EFA QRQV T + PSW++R+
Sbjct: 1 VEVGVQKAHYIEELLSRWSSAWVVFGVDPWSDVSNYNDTANVGAREQQQAFEDARQGTARFKHRVRLVRGTSPDAARHFVDGSLDFVYIDARHDYASVAADCAAFWRKLRRGGILSGHDFLDADEARLRLGPSNDWAVLPDGTRQPEGKAVRSAVVEFAEAMQRQVQVTYMEGRAGIPSWLIRK 184
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A2P6VSC1_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VSC1_9CHLO) HSP 1 Score: 146 bits (368), Expect = 5.800e-40 Identity = 84/204 (41.18%), Postives = 113/204 (55.39%), Query Frame = 1
Query: 1 RSRLGLPRLLEGDGGMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDFDE--NYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDT-----WPSWMMRR 591
R+RL + LLE +G E+GV RGE LA PS VD W +Q NY + N++D + NY +A + F G LR ++E+A PD +D V IDARHDY C EDM WWPKLRPGGILAGHD+L+A +++ DW + NG+ H + AV+GAV EFA V T + + SW++R+
Sbjct: 67 RTRLEMGDLLEREG-FTSGAELGVQRGEFALTTLAAWPSCQQYILVDVWRQQENYEEAANVDDGKQQANYDAAVAALKPFEGVTEFLRMFTSESAPLVPDSSLDYVDIDARHDYCGCAEDMALWWPKLRPGGILAGHDYLNAKEIKEFHPNEDWCLCANGTRH--EGAVKGAVGEFAAAQGLTVAVTYREIELGNPYGSWLLRK 267
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A2P6U4Q7_CHLSO (Capsular polysaccharide synthesis n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U4Q7_CHLSO) HSP 1 Score: 140 bits (354), Expect = 5.280e-39 Identity = 75/171 (43.86%), Postives = 101/171 (59.06%), Query Frame = 1
Query: 91 EWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDFDEN--YTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGG-MDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHD-TWPSWMMRR 591
E LL H PS + VD W Q NY+D+ N++ ++ Y T E + K LR +T+AA S PD +D +Y+DARHDY ED++ +WPKL+ GGILAGHD+L A +V G DWSV +GS H + AV+GAV+EFA H +V + WPSWM R+
Sbjct: 6 EQLLTHWPSCTRFYAVDLWGHQENYNDIANVDQAEQENRYQETRKRLEPWKDKMVFLRNYTTKAAESIPDNSLDFIYVDARHDYCGVKEDLDTYWPKLKSGGILAGHDYLTAGEVSAKPGETQDWSVCLDGSKH--EGAVKGAVDEFAAAHGLSIVVVYDEPAWPSWMARK 174
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A7S4LLN9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLN9_9EUGL) HSP 1 Score: 144 bits (363), Expect = 1.020e-38 Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 1 RSRLGLPRLLEGDGGMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQS-NYSDVVNLEDFDEN--YTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDTW-PSWMMRR 591
R R GL L E +G +++ +E+GV +G+ +L S + VD W Q Y DV N+ ++ Y T +++ K +R+ S A F D +D +YIDARHDY +EDM +WPKLRPGGI AGHD+LDA +V G DW++ NG + AVR AV EFA H +QV T D + PSW+MR+
Sbjct: 118 RKREGLGSLAEKEG-LKVGLEIGVQQGKFSASILERWRSFETYYCVDAWQHQELGYDDVANVGQAEQTRLYEETKERLKKYEPKVVFIREFSNVAVHRFADASLDWIYIDARHDYDGVLEDMRLYWPKLRPGGIFAGHDYLDANEVPQKWGKQDWAIGPNGVRRTDNKAVRSAVNEFAQEHGKQVSITYEDGYFPSWVMRK 317
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A2P6TNW7_CHLSO (Protoporphyrinogen oxidase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNW7_CHLSO) HSP 1 Score: 145 bits (366), Expect = 9.760e-37 Identity = 78/182 (42.86%), Postives = 109/182 (59.89%), Query Frame = 1
Query: 46 MRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDFDEN--YTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGG-MDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHD-TWPSW 579
+++ E+GV G E LL PS + VD W +Q+NY DV N+ D ++ Y + E F GKA LR + +AA PD +D +Y+DARHDY +D+EA+WPKL+ GGILAGHD+LDA +V G DWS+ +GS H AV+GAV+EFA H V+ T ++ +P+W
Sbjct: 525 LQVGAELGVKAGAFSEQLLRAWPSCSRMYLVDVWGQQANYKDVANVADSEQEAFYQQARKRMEPFKGKAIFLRNLTVDAATLIPDNSLDFIYVDARHDYCGVKQDLEAYWPKLKSGGILAGHDYLDAAEVAARPGNTQDWSLCADGSRHAG--AVKGAVDEFAAAHGLSVLVTYNEPAFPTW 704
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A7S4GIA7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GIA7_9EUGL) HSP 1 Score: 136 bits (342), Expect = 2.980e-36 Identity = 70/182 (38.46%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 52 IAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDF--DENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDTWPSWMMRR 591
+ +EVGV WLL P+ VD W +QSNY D N+++ +E Y R ++ + + K + R ST + FPD + D VY+DARHDYK D+ A+WPK+RPGG+ AGHD++D V+ + G DW V +G+ A++GAV++FA R + T + W SWM+R+
Sbjct: 63 VGIEVGVQNCNFARWLLQRWPACRQYVVVDLWAQQSNYLDRANVDNRIQEERYQRAMSNVKDWEDKVVVCRNYSTVCSERFPDAYFDFVYLDARHDYKGVAADIAAYWPKVRPGGVFAGHDYVDPAWVKSVTG-QDWLVNYDGTVDESGRALKGAVDDFAARVHLPLWVTK-ERWASWMVRK 242
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A2P6UZM8_9CHLO (O-methyltransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZM8_9CHLO) HSP 1 Score: 134 bits (338), Expect = 3.290e-36 Identity = 75/200 (37.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query: 4 SRLGLPRLLEGDGGMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDF--DENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDTWP--SWMMRR 591
+R GL LLE +G ++ E+GV RG+ L PS VD W +Q NY + N+++ +E Y +A E K ++R + EAA +D VY+DARHDY C+EDME WWPKL+PG I+AGHD+L+ + + + DW + +GS + + AV+GAV FA R+ V T + P +W++R+
Sbjct: 7 TRDGLGYLLEAEG-LKAGAELGVQRGQFARLTLDRWPSCTQYILVDVWKQQENYVEGANVDNNQQEEIYQAAIAAVEPHKAKVKVMRMFTNEAALQVAIESLDYVYVDARHDYCGCLEDMEMWWPKLKPGAIMAGHDYLNVAEQKEVTPDEDWGICMDGSRN--EGAVKGAVANFAQRYGLTVAVTYAEGHPFRTWLLRK 203
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A7S4FVA3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FVA3_9EUGL) HSP 1 Score: 134 bits (336), Expect = 5.260e-36 Identity = 69/190 (36.32%), Postives = 110/190 (57.89%), Query Frame = 1
Query: 43 GMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQ-SNYSDVVNLE--DFDENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVAT----THDTWPSWMMRR 591
G + +E+GV +G+ + +L + + +D W KQ S Y DV NL+ F+E T + +++ K ++ S +A F D +D VY+DARHDYK +ED+ +WPK+R GGILAGHD+L+ D++ + MDW+V ++GS P A R A E+F+ RQ+ T T+ +P++ MR+
Sbjct: 9 GFQTGIEIGVSKGQFAQQMLKRWTNFKKYYLIDLWAKQDSTYKDVSNLDAQGFNEILQETHSRLDKYGDKVVFVKDWSNKAVTRFEDNSIDFVYVDARHDYKGVLEDLRLYWPKVRQGGILAGHDYLNQEDLKKVDPRMDWTVNSDGSRSPDGRACRAAAEDFSQEVGRQLTITYKDETNTNFPTYYMRK 198
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A2P6V7K6_9CHLO (O-methyltransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V7K6_9CHLO) HSP 1 Score: 133 bits (334), Expect = 6.480e-36 Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 43 GMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTKQSNYSDVVNLEDF--DENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRH 534
G++ E+GV RG L PS VD W +Q NY + N++D ++ Y + + F K +R ++EAA P+ +D +Y+DARHDY C+ED+E WWPK++PGGI+AGHD+LDA +V + DW++ NG+ + + AV+GAV +F+ RH
Sbjct: 2 GLKTGAELGVQRGNFARRTLEFWPSCESYTLVDVWKQQVNYQEAANVDDTMQEQLYQTAIRTLQPFQNKTKFMRMFTSEAAPLVPNESLDYIYVDARHDYCGCLEDIENWWPKVKPGGIMAGHDYLDAKEVLVHRPNEDWALCMNGTRN--EGAVKGAVADFSVRH 165
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Match: A0A7S1Y3K1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y3K1_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.600e-34 Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = 1
Query: 43 GMRIAVEVGVHRGESLE-WLLAHAPSLWVAFGVDPWTKQ--SNYSDVVNLEDF--DENYTRTLAVTERFAGKAHLLRQSSTEAAASFPDGFVDVVYIDARHDYKSCMEDMEAWWPKLRPGGILAGHDFLDAPDVRLLVGGMDWSVMNNGSHHPQDLAVRGAVEEFAGRHQRQVVATTHDTWPSWMMRR 591
G + VE+GV +G E ++LA S VD W Q SNY D N+ D NY + K L+R +S AA PD +D Y+DARHDY ED+EA+WPKLRPG ++AGHD++ A +V G +WS+ +GS HP AVRGAV+EFA H+ ++ TT + +WM R+
Sbjct: 2 GFKHGVEIGVQQGRFSEVFILAQWKSFESYRLVDLWGHQPNSNYLDSANVNQAAQDRNYNTVKNRLRKHGNKTILMRMTSLTAALKIPDASLDFAYVDARHDYCGVKEDLEAYWPKLRPGALMAGHDYVYAHEVAEADG--NWSICEDGSFHPT--AVRGAVDEFAQSHRLKLF-TTQENHATWMFRK 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10452.642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10452.642.1 >prot_S-firma_F_contig10452.642.1 ID=prot_S-firma_F_contig10452.642.1|Name=mRNA_S-firma_F_contig10452.642.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=198bp RSRLGLPRLLEGDGGMRIAVEVGVHRGESLEWLLAHAPSLWVAFGVDPWTback to top mRNA from alignment at S-firma_F_contig10452:488..1081+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10452.642.1 ID=mRNA_S-firma_F_contig10452.642.1|Name=mRNA_S-firma_F_contig10452.642.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=594bp|location=Sequence derived from alignment at S-firma_F_contig10452:488..1081+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10452:488..1081+ >mRNA_S-firma_F_contig10452.642.1 ID=mRNA_S-firma_F_contig10452.642.1|Name=mRNA_S-firma_F_contig10452.642.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1188bp|location=Sequence derived from alignment at S-firma_F_contig10452:488..1081+ (Sphaerotrichia firma ET2_F female)back to top |