mRNA_S-firma_F_contig1045.635.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 138 bits (348), Expect = 2.000e-35 Identity = 75/129 (58.14%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATGSDYFLVTFTGGY-YPHDLKRRKVVQYISLIK-PDAAGTDN 381
MGL+S LA++PEVL+V+P ARL NAVA A+ QSAT T+TPL DAGLDG+GEVIQ+VDSGLD+ SCFF D DG VE G +D V D + T G Y +P D+ RRK+VQYI L K PD T +
Sbjct: 297 MGLLSQLAAKPEVLRVSPLQSARLHNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDSGLDETSCFFADDDGLQVEHGFLFDGVRVEDDGNVSTVLGNYSFPFDMSRRKIVQYIQLFKTPDQGSTSS 425
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.340e-33 Identity = 68/130 (52.31%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATG--------SDYFLVTFTGGYYPHDLKRRKVVQYISLIKPDA 366
MGLVS LA RPEVL+V+P R+LNA A+ I QSA+ T TPLTDAGLDG+GE+IQ++DSGLD+ SC+F D G+ V+ G+Y+DE+A SD F GG + + +RRK++QYI L+ PD+
Sbjct: 33 MGLVSVLAGRPEVLRVSPRPTKRVLNAAARGIVQSASATDTPLTDAGLDGTGEIIQVIDSGLDETSCYFIDDSGEEVDHGYYFDELAQAAVYSSLYSSDETATIFNGGDFSYYPERRKIIQYIDLVNPDS 162
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI) HSP 1 Score: 132 bits (332), Expect = 2.860e-33 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATGSDYFLVTFTGGY-YPHDLKRRKVVQYISLIK-PDAAGTDN 381
MGL+S LA++PEVL+V+P A L NAVA A+ QSAT T+TPL DAGLDG+GEVIQ+VD+GLD+ SCFF D DG VE G + V D + T G Y +P D+ RRK+VQYI + K PD T +
Sbjct: 250 MGLLSQLAAKPEVLRVSPLQSASLYNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDTGLDETSCFFADDDGLQVEHGFLFGGVRVEGDGNVSTVLGNYSFPFDMSRRKIVQYIQMFKTPDQGSTSS 378
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 131 bits (330), Expect = 5.320e-33 Identity = 66/127 (51.97%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATGSD-----YFLVTFTGGYYPHDLKRRKVVQYISLIKPDA 366
MGLVS+ A RPEVL+V+P H R+LN A+ I QSA+ T TPLTDAGLDG+GEVIQ+VD+GLD+ SCFF D G+ V+ G++++E+ GS + F G + + +RRKV+QYI L+ PD+
Sbjct: 321 MGLVSFFAGRPEVLRVSPRHTKRVLNEAARGIIQSASATDTPLTDAGLDGTGEVIQVVDTGLDETSCFFIDDGGEEVDHGYFFEELFVGSTGSSQLIYYPVFEAGDFTYTEERRKVIQYIELVNPDS 447
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 129 bits (323), Expect = 4.670e-32 Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATGSDYFLVT----------FTGGYYPHDLKRRKVVQYISLIKPD 363
MGLVS+LASR EVLKVA +++ LNA A+A QSA++ TPLTDAGLDGSGEVIQI+D+G+++ +CF DG VE G+Y+D VA+ + F + FTGG + +D RRKV+QYI LI PD
Sbjct: 316 MGLVSFLASRHEVLKVAGWNRKVNLNAAARATIQSASVDSTPLTDAGLDGSGEVIQIIDAGVNETTCFLEHGDGTEVEHGYYFDFVASSNPLFTSSSESRSMFKAEFTGGDFSYDSDRRKVIQYIDLINPD 446
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.540e-31 Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDG-KHVEGGHYYDEVA----------TGSDYFLV---TFTGGYYPHDLKRRKVVQYISLIKPDAAGTDNPN 387
M L+S+LASRPEVL+V+P +LLNA A QSA +T++P+TDAGLDG+GEVIQIVD+GLD SCFF D+DG + V GHY++E+ T D+ L FTGG + DL RRK+VQYI+LI+ D+ N
Sbjct: 116 MALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDFNLQIARVFTGGDFNFDLSRRKIVQYINLIRQDSETNSTAN 258
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: A0A6H5L2G3_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G3_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.250e-30 Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVATGS----------DYFLVTFTGGYYPHDLKRRKVVQYISLIKPD 363
MGLVS+ ASR EVLKV +++ LNA A+A QSA++ TPLTDAGLDGSGEVIQI+D+G+++ +CF DG VE G+Y+D VA+ + F FTGG + +D RRKV+QYI LI PD
Sbjct: 5 MGLVSFFASRHEVLKVTGWNRKVNLNAAARATIQSASVDSTPLTDAGLDGSGEVIQIIDAGVNETTCFLEHGDGTEVEHGYYFDFVASSNPSFDSSSESRSMFKAEFTGGDFFYDSDRRKVIQYIDLINPD 135
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI) HSP 1 Score: 121 bits (303), Expect = 2.220e-29 Identity = 72/155 (46.45%), Postives = 92/155 (59.35%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFF-RDQDGKHVEGGHYYDEVA--------------------------------TGSDYFLVT-FTGGYYPHDLKRRKVVQYISLIKPD 363
MGLVS+LAS+PEVL+VAP LLNA A+A QSAT+T TPLTDAGLDG+G+V+Q++DSG+D+ SCFF D+ G HV GHY++E TGS Y + F GG + RRK++QYI+LIK D
Sbjct: 1 MGLVSFLASKPEVLRVAPRQSQALLNAAARANIQSATVTDTPLTDAGLDGTGQVVQVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPSLTSSSFSSPXXXXXXXXXXXPWATADHHTGSYYQIAEEFDGGDFTIYPDRRKIIQYINLIKSD 155
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 120 bits (302), Expect = 3.170e-29 Identity = 72/154 (46.75%), Postives = 92/154 (59.74%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFF-RDQDGKHVEGGHYYDEVA-------------------------------TGSDYFLVT-FTGGYYPHDLKRRKVVQYISLIKPD 363
MGLVS+LAS+PEVL+VAP LLNA A+A QSAT+T TPLTDAGLDG+G+V+Q++DSG+D+ SCFF D+ G HV GHY++E TGS Y + F GG + RRK++QYI+LIK D
Sbjct: 312 MGLVSFLASKPEVLRVAPRQSQALLNASARANIQSATVTDTPLTDAGLDGTGQVVQVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPPLTSSSFSSPTSDDDDSLGWPRATDDHRTGSYYQIAEEFDGGDFTIFPDRRKIIQYINLIKSD 465
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 115 bits (289), Expect = 1.770e-27 Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 1 MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGSGEVIQIVDSGLDQESCFFRDQDGKHVEGGHYYDEVA 261
MGLVS+L++R EVL+V+P H RLLNAVA+ I QSATIT+ PLTDAGLDG+G+VIQ++D+GLD+ SCFF D DG+ V GHYY+ +
Sbjct: 317 MGLVSFLSNRLEVLRVSPRHADRLLNAVARTIIQSATITEAPLTDAGLDGTGQVIQVIDTGLDETSCFFIDDDGEEVPHGHYYEALG 403 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1045.635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1045.635.1 >prot_S-firma_F_contig1045.635.1 ID=prot_S-firma_F_contig1045.635.1|Name=mRNA_S-firma_F_contig1045.635.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=129bp MGLVSYLASRPEVLKVAPFHKARLLNAVAKAISQSATITKTPLTDAGLDGback to top mRNA from alignment at S-firma_F_contig1045:731..2022+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1045.635.1 ID=mRNA_S-firma_F_contig1045.635.1|Name=mRNA_S-firma_F_contig1045.635.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1292bp|location=Sequence derived from alignment at S-firma_F_contig1045:731..2022+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1045:731..2022+ >mRNA_S-firma_F_contig1045.635.1 ID=mRNA_S-firma_F_contig1045.635.1|Name=mRNA_S-firma_F_contig1045.635.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=774bp|location=Sequence derived from alignment at S-firma_F_contig1045:731..2022+ (Sphaerotrichia firma ET2_F female)back to top |