mRNA_S-firma_F_contig10444.631.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10444.631.1
Unique NamemRNA_S-firma_F_contig10444.631.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI)

HSP 1 Score: 626 bits (1614), Expect = 1.730e-221
Identity = 318/365 (87.12%), Postives = 343/365 (93.97%), Query Frame = 1
Query:  190 RRRPSVQTAAAAGGLATTASLERVMDGLGESEKYNAVLQGVSSLLMGKKKGGAAANGSFEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAADPDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIERRTT 1284
            ++R    T AA GGL  TASLERVM+GLGE+EKYNAVLQGVSS++MGKKK G AA G+FEEVFQLLDEMHANRIKC+IRTASA+VDAATATT+IGIIT+VF+KIRRAGVGQKFSRDLGRLSLLPTE S+K+KALR L PVPDDDRAQEIGYAASFM+LVGSDFSWEG+GQVMHYDTTIPTVIGAVTAAAV +DVWKR+GCTSKMVLNGMNRLFLKDVERESRAEAGAFL AYMTGLPCFAFQPSAVEALRMAADPDM++TFL+GNGVHRILVWLLAGVAGEGL+HRQMIASDPRQA+AFLQMVRNR  G ELDP+DD ERVQWAFNEARALLKDNE AFEALR+RLE GGATVGDCVSIIERRTT
Sbjct:   12 KQRIQAATTAAGGGLVKTASLERVMEGLGENEKYNAVLQGVSSIVMGKKKVGDAARGAFEEVFQLLDEMHANRIKCSIRTASAVVDAATATTDIGIITKVFSKIRRAGVGQKFSRDLGRLSLLPTEASKKEKALRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNREDGFELDPEDDSERVQWAFNEARALLKDNEGAFEALRRRLEGGGATVGDCVSIIERRTT 376          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA)

HSP 1 Score: 334 bits (857), Expect = 5.090e-107
Identity = 174/362 (48.07%), Postives = 244/362 (67.40%), Query Frame = 1
Query:  214 AAAAGGLATTASLERVMDGLGESEKYNAVLQGVSSLLMGKKKGGAAANGSFEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAAD-PDMEDTFLSGN--GVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGI-----GCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIER 1275
            A+A   L  + S +RV+D L + ++YNAVLQG++ + +      ++    F E+ +LLDEM    I CT R+  A+VDAA +T  +  +    +K+RR G  QKFSR+L RL+ LP +  ++ +AL+ L P P DDR  ++ +A +F+ +VG DF+ +G+  V+ +D T+P ++   TA AVA+D+++     S+ VL G++RLF +DV RESRAEAGAFL  Y+TGLPCFAF+P+ +EALRM    P++++ F SG   G HR LVWLL+ VAGE L HRQ+I SDPRQA  FL + R RG+         D +DD   V+WAFNEAR LL+DNE  FEALRQRLE+GGATVG+CVS+I+R
Sbjct:   12 ASAGSSLVVSKSFDRVLDSLSDQDRYNAVLQGLAGIAV-----SSSGKDRFVELLKLLDEMADRNIGCTTRSGGAVVDAAASTAEVAKVATAMSKLRRTGAAQKFSRELTRLAPLPLDERRRARALKDLVPTPSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSGGAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARERGLLPSCGDAAADAEDDEMAVRWAFNEARELLRDNEGMFEALRQRLETGGATVGECVSLIDR 368          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.820e-66
Identity = 135/354 (38.14%), Postives = 213/354 (60.17%), Query Frame = 1
Query:  238 TTASLERVMDGLGESEKYNAVLQGVSSLL---MGKK---KGGAAANGS--FEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAAD-PDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIE 1272
            +++  + +MD + + EKYN +LQ  +S L   +GKK    GG++ + S  F  +++L++EM    ++ T+R+ +AL+DAA+ + ++ +I E     RR GV + F+R +G L+  P  P +       L+PVP D R  E+    + + +VG   S E VG ++H DTT  +V+    A     D+ +R G    + L G+NRLFL+D ER++  +A  FL AY+ GLPCF F P+ +EA+RM A  P   +T  S  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   RG     +  ++   + WA+ EA+ LL+ + +  E L+QR+ESGGATVGDCV+++E
Sbjct:   19 SSSQYDELMDNMSDDEKYNILLQSRASSLVQSLGKKGRGMGGSSRSTSEAFTPLYKLVEEMTDKDMRITLRSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGALN--PPPPLRAASDRYDLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 370          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.760e-65
Identity = 136/354 (38.42%), Postives = 211/354 (59.60%), Query Frame = 1
Query:  238 TTASLERVMDGLGESEKYNAVLQG-VSSL--LMGKKKGGAAANG-----SFEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAAD-PDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIE 1272
            +++  + +MD L + EKYN +LQ   SSL  L+GKK  G   N      +F  +++L++EM    ++ T+++ +AL+DAA+ + ++ +I E     RR GV + F+R +G L+  P  P +       L+PVP D R  E+    + + +VG   S E VG ++H DTT  +V+    A     D+ +R G    + L G+NRLFL+D ER++  +A  FL AY+ GLPCF F P+ +EA+RM A  P   +T  S  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   RG     +  ++   + WA+ EA+ LL+ + +  E L+QR+ESGGATVGDCV+++E
Sbjct:  150 SSSQYDELMDNLSDDEKYNILLQSRASSLVQLLGKKGRGMGGNSRSTSEAFTPLYKLVEEMTDKDMRITLKSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGTLN--PPPPLRAASDRYDLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 501          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A0G4G463_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G463_VITBC)

HSP 1 Score: 222 bits (566), Expect = 4.230e-63
Identity = 129/344 (37.50%), Postives = 200/344 (58.14%), Query Frame = 1
Query:  250 LERVMDGLGESEKYNAVLQGVSSLLMGKKKGGAAANGSFEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMH--YDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAADPDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIER 1275
            L R++D L E++KYN + QG+   ++  K   A  + S +E + LLDEM    +K T RT S LVDAA  T +   +         +G+   + +        P +  +      SL  +P+D R++++  A++FM  VG+    E +G  ++  +D   PTV     AAA   D+ K  G  SK V+ G+ RL + D ER+ R E+ AFLVAY+ GLPCF F+P+ +EAL+MA DP +    L+  G+ ++LVWLLAGVA E L H + I +DPRQ+ AF++++R++     +D +    RV+WAF++A  LL+ +    + LR+R+ES  ATVGDCV+ +E+
Sbjct:   77 LARILDSLPEADKYNTLAQGLFRRVLNDKSPDARQS-SLQEGWTLLDEMRQKALKATPRTFSLLVDAAAVTNDAEAMKRSLELATGSGLSVVYGQADKGWEGSPVDAGRLASVTESLTDMPEDSRSKDVVVASAFMGYVGTGVGAETLGDYIYGDFDEIYPTVALLALAAAGVYDIVKGGGVVSKSVVAGLKRLLVDDKERQCRVESAAFLVAYLLGLPCFCFRPNVLEALKMAEDPRIRMDLLTPAGIDKLLVWLLAGVAAENLQHPECIVADPRQSDAFVKLMRDKDYLKGVDDETASLRVKWAFHKATNLLRKHRRVHDELRRRMESKAATVGDCVTFLEK 419          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A7S2H157_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H157_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.850e-57
Identity = 127/361 (35.18%), Postives = 203/361 (56.23%), Query Frame = 1
Query:  250 LERVMDGLGESEKYNAVLQGVSSLLMGKKKGGAAANGSFEEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKR------------------AGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAADPDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIERR 1278
            L + +D L   ++Y+ VLQG+  L  GK    A  +    +V+ LL+EM A   K  I+T +AL+D A  T +I  +       RR GV  ++S D+ ++ L P    Q+ K  R+L  VP D R  E+ +A SF+  + +   W  +  ++H +  +PT    V    +  D +                     G  ++++L G+NRLF +D+ RE R EA +FLVAY+ GLP F+  P+ +EA+++     ++++ ++  G++RILVWLLA VA E   HRQ+I SDPR A A L+++R RG+    + DD L RV+ A ++A  LL  + +  +ALR+R+ESG ATVG+CV ++E++
Sbjct:   71 LRKAIDNLSAGDRYDFVLQGM--LQQGKCDTSALTS----DVWPLLEEMTAAGKKMAIKTRAALLDVAAGTEDINAVDNSLKLSRRNGVLARYSMDVPKV-LPPLVERQRDKLDRTLPEVPIDSRELEVTFALSFVAFISASVGWGSIAPILHQEPLVPTWATFVAVLLLLADNFNALVSISKDGNFQLATLPQIGGDGTRVLLAGLNRLFTRDLTRECRCEAASFLVAYVLGLPSFSLNPTTLEAIKLTDVEPIKESLMTDAGINRILVWLLASVAVENAQHRQLIVSDPRNAPALLRLLRERGVDVGEEEDDAL-RVRHALSQADLLLTRHGATLDALRERMESGAATVGNCVGLLEKQ 423          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A7S1XSQ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSQ6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.250e-53
Identity = 111/291 (38.14%), Postives = 171/291 (58.76%), Query Frame = 1
Query:  430 ASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGV------GQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRM--AADPDMEDTF-LSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGI-GCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIE 1272
            A A++D A AT     +  V   +R  G    +     RL+ LP+ P ++++ L  LAP+P DDR +E+  + +FM   G     E          ++H    +P  + A++AAA  +D+W R G T   + +G++RLF KD ER++R E+ + +V Y+ GLPCFAF+PS  EAL +  A D  M++    +   V+R+LVWLLA VAGE   + Q++ASDPRQA AFL +VR RG+ G    PD+  + V+WA+ EAR L++ NE   + + +R+E+   +VGDC +I +
Sbjct:    7 AGAVLDGAAATGTPLSVLRVLDALRPLGQATAYGGAAARLTPLPSNPERRRRTLEGLAPLPSDDRLKELWLSLAFMGYCGVGVGLEAAIPFTDDPNLLH-SGLLPDAMLALSAAAAGIDIWGRQGKTLLELRSGLSRLFYKDSERDARCESASLVVGYLLGLPCFAFRPSVQEALALLDAEDAAMQEALPRNAATVNRLLVWLLAPVAGEDTKYSQLLASDPRQAAAFLSLVRARGVDGAAYSPDEAGDMVKWAYGEARKLVRTNEVLIDRISERMETMQGSVGDCAAICD 296          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A8J2WW41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW41_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.870e-42
Identity = 113/315 (35.87%), Postives = 161/315 (51.11%), Query Frame = 1
Query:  346 AAANGSFEEV---FQLLDEMHANRI-KCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVT-AAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAADPDMEDTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWAFNEARALLKDNESAFEALRQRLESGGATVGDCVSIIER 1275
            AA +G   ++    QL++EM A  + K   +   ALVDAA AT +   +  V T  +R+G  + +    G   L P+ P   Q +L+    +P DDRA E   A + +  VG     E    +   D   P     V  AAA   D +   G  +K    G++RL  +D  RE+  EA +F + Y  GLPCFAF P+AVEA   A    + D  +  N V  +LVWL A VA E   HR+++ASDPRQA AFL ++R RG   +++ ++D    +WA  +A  LL+    + E L    ESG AT GD V+ +ER
Sbjct:   54 AALSGQQRDIDIALQLIEEMAATNVGKVPAKVVGALVDAAVATKDARRVDAVLTVAKRSGGARSYGSAAGSPKLPPSSPQAFQSSLQQCPELPTDDRATETAAALAALACVGFPALAEVAASITGGDAPGPATFTLVADAAAFGADAYLLGGEIAKKAGAGVDRLLARDARREAECEAASFDLGYRLGLPCFAFSPTAVEAANAA----VVDGSVDENRVRALLVWLCAPVACERRKHRKLLASDPRQAVAFLTLLRGRGQFTDVNSNED--NARWALGDAARLLESRTRSVEELADFFESGVATAGDVVARLER 362          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.400e-39
Identity = 121/361 (33.52%), Postives = 179/361 (49.58%), Query Frame = 1
Query:  367 EEVFQLLDEMHANRIKCTIRTASALVDAATATTNIGIITEVFTKIRRA------GVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPT---VIGAVTAAAVAVDVWKRAGCTSKMV-------------------------LNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAA---------DPDME---------DTFLSGNGVHRILVWLLAGVAGEGLIHRQMIASDPRQAYAFLQMVRNR------GIGCELDPDDDLERVQWAFNEARALLK-DNESAFEALRQRLESGGATVGDCVSIIE 1272
            EE  +LL EM++  +  T R  SAL+D A +  ++ +++ V T +RR         GQ+  RDL   +  PT   +KQ+ L ++  +P DDRA EI  A S + +  + F  + + ++       P    V+ A+ +  V  + +     T+ +V                         + G NRLF +D ER   AEA AFL AY  GLPCFAFQP+A+EA  +A          DP++          D  LS  GV ++L+WL A VA E   H Q++ SDPR+A +FL  +RN+      G    +D  DDL  ++WA+ EA  L + DN    +AL + L SG +T+GD V IIE
Sbjct:    6 EEPLKLLVEMNSRNVPVTYRACSALLDVAGSCEDVQVMSTVMTLLRRNRDSPINNYGQR-QRDL---TQYPTNQPKKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNKLSSSNIGHSVAIDEADDL--MKWAYAEADMLQRQDNGQKLQALSEGLASGASTLGDIVGIIE 360          
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Match: A0A7S3XHA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHA8_HETAK)

HSP 1 Score: 138 bits (347), Expect = 9.810e-35
Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  508 AGVGQKFSRDLGRLSLLPTEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHYDTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLVAYMTGLPCFAFQPSAVEALRMAAD 951
            AG GQ F R L RL+ LP +P+ + KAL+ L PVP D+R++E+  + +F+ LVG+DF W+ VG + H D+ +P ++ A     +A D+   AG  S  V  G+NRL +KD ERE+R EA AFLV Y  GLPCF F+P+ +EALR+  +
Sbjct:    1 AGAGQVFGRALPRLTPLPVDPAARAKALKGLEPVPQDERSKEVTASLAFLGLVGADFGWQTVGALQHSDSPLPQLVLAALFGGLAYDLVSGAGQVSGSVAAGLNRLLVKDFEREARCEAAAFLVGYALGLPCFPFRPNVLEALRLVQE 148          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10444.631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LH72_ECTSI1.730e-22187.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z355_9STRA5.090e-10748.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D6H3_9STRA4.820e-6638.14Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U4H7_9STRA3.760e-6538.42Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A0G4G463_VITBC4.230e-6337.50Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2H157_9STRA1.850e-5735.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XSQ6_9STRA4.250e-5338.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2WW41_9STRA1.870e-4235.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KXP3_9STRA6.400e-3933.52Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3XHA8_HETAK9.810e-3546.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10444contigS-firma_F_contig10444:1167..3936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LH72
Max annot lvl2759|Eukaryota
Evalue5.5e-218
EggNOG OGs2DR9F@1|root,2S6DN@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_000800.1
Exons5
Model size1677
Cds size1026
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.8211284-UTR-S-firma_F_contig10444:1166..15561622815578.8211284-UTR-S-firma_F_contig10444:1166..1556Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10444 1167..1556 -
1696949430.6356134-UTR-S-firma_F_contig10444:1166..15561696949430.6356134-UTR-S-firma_F_contig10444:1166..1556Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10444 1167..1556 -
1622815578.8998463-UTR-S-firma_F_contig10444:3675..39361622815578.8998463-UTR-S-firma_F_contig10444:3675..3936Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10444 3676..3936 -
1696949430.6944847-UTR-S-firma_F_contig10444:3675..39361696949430.6944847-UTR-S-firma_F_contig10444:3675..3936Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10444 3676..3936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.836044-CDS-S-firma_F_contig10444:1556..17371622815578.836044-CDS-S-firma_F_contig10444:1556..1737Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 1557..1737 -
1696949430.6472714-CDS-S-firma_F_contig10444:1556..17371696949430.6472714-CDS-S-firma_F_contig10444:1556..1737Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 1557..1737 -
1622815578.853621-CDS-S-firma_F_contig10444:2012..21801622815578.853621-CDS-S-firma_F_contig10444:2012..2180Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2013..2180 -
1696949430.6554978-CDS-S-firma_F_contig10444:2012..21801696949430.6554978-CDS-S-firma_F_contig10444:2012..2180Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2013..2180 -
1622815578.8640287-CDS-S-firma_F_contig10444:2345..26771622815578.8640287-CDS-S-firma_F_contig10444:2345..2677Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2346..2677 -
1696949430.6648817-CDS-S-firma_F_contig10444:2345..26771696949430.6648817-CDS-S-firma_F_contig10444:2345..2677Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2346..2677 -
1622815578.874478-CDS-S-firma_F_contig10444:2916..30351622815578.874478-CDS-S-firma_F_contig10444:2916..3035Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2917..3035 -
1696949430.6749067-CDS-S-firma_F_contig10444:2916..30351696949430.6749067-CDS-S-firma_F_contig10444:2916..3035Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 2917..3035 -
1622815578.8871293-CDS-S-firma_F_contig10444:3449..36751622815578.8871293-CDS-S-firma_F_contig10444:3449..3675Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 3450..3675 -
1696949430.6862748-CDS-S-firma_F_contig10444:3449..36751696949430.6862748-CDS-S-firma_F_contig10444:3449..3675Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10444 3450..3675 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10444.631.1prot_S-firma_F_contig10444.631.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10444 1557..3675 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10444.631.1

>prot_S-firma_F_contig10444.631.1 ID=prot_S-firma_F_contig10444.631.1|Name=mRNA_S-firma_F_contig10444.631.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=342bp
MDGLGESEKYNAVLQGVSSLLMGKKKGGAAANGSFEEVFQLLDEMHANRI
KCTIRTASALVDAATATTNIGIITEVFTKIRRAGVGQKFSRDLGRLSLLP
TEPSQKQKALRSLAPVPDDDRAQEIGYAASFMLLVGSDFSWEGVGQVMHY
DTTIPTVIGAVTAAAVAVDVWKRAGCTSKMVLNGMNRLFLKDVERESRAE
AGAFLVAYMTGLPCFAFQPSAVEALRMAADPDMEDTFLSGNGVHRILVWL
LAGVAGEGLIHRQMIASDPRQAYAFLQMVRNRGIGCELDPDDDLERVQWA
FNEARALLKDNESAFEALRQRLESGGATVGDCVSIIERRTT*
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mRNA from alignment at S-firma_F_contig10444:1167..3936-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10444.631.1 ID=mRNA_S-firma_F_contig10444.631.1|Name=mRNA_S-firma_F_contig10444.631.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2770bp|location=Sequence derived from alignment at S-firma_F_contig10444:1167..3936- (Sphaerotrichia firma ET2_F female)
CAGGCGAGGTTGAAGTGTACACCACTGACGATGGCTCTCAGCGGGCGCGG TTTGGACTCTGTAGGAGGGAAACAACCGATGCAACAGGTATGACTACGGA ACTTCATTTTTCTTTTGTGAGAGTTTGCAGGGATAGGTGTTGCGTGGTCG CTCATGTTACTCATCCCTGCTCATACATCGGTGTGACCGCGTCGTCGTCC ATCGGTTCAGACCGCTGCCGCTGCCGGAGGATTGGCCACGACAGCCTCGT TGGAACGCGTGATGGATGGCCTTGGGGAAAGTGAAAAGTACAACGCTGTC CTGCAAGGCGTGTCTAGCCTTTTGATGGGCAAGAAGAAGGGCGGCGCGGC GGCGAACGGTTCGTTTGAAGAAGTGTTTCAACTGCTTGACGAAATGCACG CCAACAGGATCAAGTGCACAATCCGAACCGCCTCGGCTTTGGTGGATGCT GCAACTGCCACGACCAACATCGGCATCATTACGGAAGGTATGTATCACAT TTGTGTTAAGTTTCTTGTGAAGTGCAGCACAAAAGAGAGGTTCAGAGTGA GCGGCGTGGTGTCGAGTTTGTGGTGCGAGACGTGTGAGGCTGTGCACCTG CAGCAGCCGCAGCAGCAGCAGCAGTAGTATTCATACGGAGCACCTTGCTC TGTCTTATTTTACGCGAGAAGTGGCTGAGCGACGTTCTACTTTCTCTCCA GTTTTTCACGTGCGTGTTGCCTCTCCTTTCTCCAAGATGGGACGAGTTTG CCTACTGTACGTTGGGATCTCGACCGGGGGGCTTTGCCAGTTCGCGAGCT TCACTCACTTGGCTACTTGCTGTGCATCACCGTCCCACATGTGGTCTCGT GACCCAAATGGAGTTTGTGGTTTCCCCCTCCCCCGTCATTCGATTCGCCA GTTTTCACGAAAATTCGACGAGCTGGGGTTGGGCAGAAGTTTTCTCGTGA CCTTGGCCGGCTGTCTCTGCTGCCGACTGAGCCGTCGCAAAAGCAGAAAG CTCTTCGGAGCCTTGCACCGGTGAGCCGTTGTAGCAGTCCAGGCCTGCTC TACGACGATTGCTAGGGAAAATGTTGCGCACAGGAGCACCAGAGGCTGCC CACAAAGCCCCCCGCCCGCGCTAAGGCTCAAGCAGGAGCATCTACTTCGC TTGTTCTCTTTCCCAAGAGCTCATGAACTCGTAACACTTGCCGGAGCGAG GTGTCTGAGGTTCGTGACAACAACGTTGTCGCGTTGCACACCTCCCTGGC CATCGACAGGTGCCCGATGACGACCGTGCCCAGGAAATAGGGTATGCCGC GTCCTTCATGTTGCTGGTCGGCTCTGACTTCTCGTGGGAGGGAGTTGGAC AGGTGATGCACTACGATACAACCATCCCGACGGTCATTGGGGCGGTAACT GCGGCTGCCGTGGCCGTCGACGTGTGGAAAAGAGCCGGTTGCACGTCGAA GATGGTTCTTAACGGCATGAACAGGCTGTTTCTGAAGGACGTCGAGCGCG AGAGCCGAGCAGAGGCTGGAGCTTTCTTGGTGGCATACATGACAGGCCTG CCCTGCTTCGCCTTTCAGCCCAGTGCGGTAGAGGCCCTCAGGTGTGTATT GATGCACTACTGCTGTAGCTGGCGTCCCGTTCCGCTCCGCTTGCCATCCC CTCTCTTGCATATGGTGTACTCTTGCGCATTGAGTGAGGACCTTGCCCGT TGATGTAGGAAGAGGGGAACGTGAAACGCTTAACCTACGGCCCCGCTTCG CACCAGGATGGCTGCCGATCCCGACATGGAGGACACTTTTTTAAGCGGTA ACGGCGTCCACCGTATTCTGGTCTGGCTGCTAGCCGGGGTTGCCGGGGAA GGATTGATTCACCGGCAAATGATTGCTAGCGATCCTCGCCAGGCCTATGC TTTCCTGCAGATGGTCCGAAATAGGTGAGCACCTAATGCTTGTCACGTGG ATTGCTGTTTAGCAGCATCGGCGGGAACTGCAAAATCGGTTGTCTTCCTG TCTGTGTGGTTGTTGCTGGCGGTCATGCGCGTACTTTGTTGGTTTGTTGG GTGTGTGTGTGCTACCCCACTGGCCAATGACGTATGCGTCACACCCACTT ACTCTGCGCGTCTCGTTGCAGTAGATAAATCCGACGATGCTGTCGTGGTT GCACATCTATCTGACCTTGGCCTAACTTCCGCTTTCGTCTGTTCGCAAGG GGCATTGGATGTGAGCTGGATCCTGACGACGACCTCGAACGCGTTCAGTG GGCGTTTAATGAGGCTAGAGCCCTACTCAAGGACAACGAGAGCGCGTTTG AGGCTTTGCGACAGAGGCTAGAAAGTGGTGGAGCAACAGTCGGAGATTGT GTGTCCATTATCGAGAGAAGGACAACTTAAGTTTGTAACAGGCATCTTAG TGTTTTCCTGTTGACTTGTCGGCCCCTTTCCGCGGCACAGAGGACAAGGC GCGAAACGTTGTATATATACCTCGCGGTTTTCTTCTCTGTCCTGGCTCCA AGAAAACGTGTATGATAGCTGTTACTAGAGCCAGTGACCTGAGGTTCGTT GGGTGACGCGTAAGAAAAAAATACTCCTGTTGTATTTGTAAAAATGGTGT ACCTGTATATACATTTCCTGCTTTCCAGCAGCAGAGATTATAGTACACAT GACTGCTGTACTCTGTACGCAGTCCCCGCAAAAACTACTACTACTGCCTT CTGAAAACCAGTCATTTGTATCACACGATCCACTCAACTTACTGCTGGGT GCTGCAATCAGCAACGTGGG
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Coding sequence (CDS) from alignment at S-firma_F_contig10444:1167..3936-

>mRNA_S-firma_F_contig10444.631.1 ID=mRNA_S-firma_F_contig10444.631.1|Name=mRNA_S-firma_F_contig10444.631.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2052bp|location=Sequence derived from alignment at S-firma_F_contig10444:1167..3936- (Sphaerotrichia firma ET2_F female)
ATGGATGGCCTTGGGGAAAGTGAAAAGTACAACGCTGTCCTGCAAGGCGT
GTCTAGCCTTTTGATGGGCAAGAAGAAGGGCGGCGCGGCGGCGAACGGTT
CGTTTGAAGAAGTGTTTCAACTGCTTGACGAAATGCACGCCAACAGGATC
AAGTGCACAATCCGAACCGCCTCGGCTTTGGTGGATGCTGCAACTGCCAC
GACCAACATCGGCATCATTACGGAAGATGGATGGCCTTGGGGAAAGTGAA
AAGTACAACGCTGTCCTGCAAGGCGTGTCTAGCCTTTTGATGGGCAAGAA
GAAGGGCGGCGCGGCGGCGAACGGTTCGTTTGAAGAAGTGTTTCAACTGC
TTGACGAAATGCACGCCAACAGGATCAAGTGCACAATCCGAACCGCCTCG
GCTTTGGTGGATGCTGCAACTGCCACGACCAACATCGGCATCATTACGGA
AGTTTTCACGAAAATTCGACGAGCTGGGGTTGGGCAGAAGTTTTCTCGTG
ACCTTGGCCGGCTGTCTCTGCTGCCGACTGAGCCGTCGCAAAAGCAGAAA
GCTCTTCGGAGCCTTGCACCGTTTTCACGAAAATTCGACGAGCTGGGGTT
GGGCAGAAGTTTTCTCGTGACCTTGGCCGGCTGTCTCTGCTGCCGACTGA
GCCGTCGCAAAAGCAGAAAGCTCTTCGGAGCCTTGCACCGGTGCCCGATG
ACGACCGTGCCCAGGAAATAGGGTATGCCGCGTCCTTCATGTTGCTGGTC
GGCTCTGACTTCTCGTGGGAGGGAGTTGGACAGGTGATGCACTACGATAC
AACCATCCCGACGGTCATTGGGGCGGTAACTGCGGCTGCCGTGGCCGTCG
ACGTGTGGAAAAGAGCCGGTTGCACGTCGAAGATGGTTCTTAACGGCATG
AACAGGCTGTTTCTGAAGGACGTCGAGCGCGAGAGCCGAGCAGAGGCTGG
AGCTTTCTTGGTGGCATACATGACAGGCCTGCCCTGCTTCGCCTTTCAGC
CCAGTGCGGTAGAGGCCCTCAGGTGCCCGATGACGACCGTGCCCAGGAAA
TAGGGTATGCCGCGTCCTTCATGTTGCTGGTCGGCTCTGACTTCTCGTGG
GAGGGAGTTGGACAGGTGATGCACTACGATACAACCATCCCGACGGTCAT
TGGGGCGGTAACTGCGGCTGCCGTGGCCGTCGACGTGTGGAAAAGAGCCG
GTTGCACGTCGAAGATGGTTCTTAACGGCATGAACAGGCTGTTTCTGAAG
GACGTCGAGCGCGAGAGCCGAGCAGAGGCTGGAGCTTTCTTGGTGGCATA
CATGACAGGCCTGCCCTGCTTCGCCTTTCAGCCCAGTGCGGTAGAGGCCC
TCAGGATGGCTGCCGATCCCGACATGGAGGACACTTTTTTAAGCGGTAAC
GGCGTCCACCGTATTCTGGTCTGGCTGCTAGCCGGGGTTGCCGGGGAAGG
ATTGATTCACCGGCAAATGATTGCTAGCGATCCTCGCCAGGCCTATGCTT
TCCTGCAGATGGTCCGAAATAGGATGGCTGCCGATCCCGACATGGAGGAC
ACTTTTTTAAGCGGTAACGGCGTCCACCGTATTCTGGTCTGGCTGCTAGC
CGGGGTTGCCGGGGAAGGATTGATTCACCGGCAAATGATTGCTAGCGATC
CTCGCCAGGCCTATGCTTTCCTGCAGATGGTCCGAAATAGGGGCATTGGA
TGTGAGCTGGATCCTGACGACGACCTCGAACGCGTTCAGTGGGCGTTTAA
TGAGGCTAGAGCCCTACTCAAGGACAACGAGAGCGCGTTTGAGGCTTTGC
GACAGAGGCTAGAAAGTGGTGGAGCAACAGTCGGAGATTGTGTGTCCATT
ATCGAGAGAAGGACAACTTAAGGGCATTGGATGTGAGCTGGATCCTGACG
ACGACCTCGAACGCGTTCAGTGGGCGTTTAATGAGGCTAGAGCCCTACTC
AAGGACAACGAGAGCGCGTTTGAGGCTTTGCGACAGAGGCTAGAAAGTGG
TGGAGCAACAGTCGGAGATTGTGTGTCCATTATCGAGAGAAGGACAACTT
AA
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