mRNA_S-firma_F_contig10440.624.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10440.624.1
Unique NamemRNA_S-firma_F_contig10440.624.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: D8LQ70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ70_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 8.860e-161
Identity = 272/405 (67.16%), Postives = 300/405 (74.07%), Query Frame = 1
Query:    1 VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLPVQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQFEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQTPP-ALRIEADGGNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRAFSDEGGARHSITSTGXXXXXXXXXXXXXGTPGTRIALSPPK-KRGLPSGASLKILQAATGVAVIPSAATPTTQHTQPDNKLPLDNTAQAGSPWLEVETGIETCAA-AEDEEAGISL 1206
            VVWPD+TLGDVL+VFKQGKSHL LVRDVN++GEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFV+++NQLPVQRS+FDMSRLQLLNANAD+SALSTDEAKAVASHLMANVPQFEG+NVSHVESIIAASPVVEV+KE+KH GR+EPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEG YKPDFSAHAGSERLRCVRISKASFDT+ SMS+QE + P  A R E  GG                                    PRAFSDEG    +  +T              G    RI LSP K +RGLP+GASLKILQAATGVA+  S+ T T   ++     PL+  AQ  SP  +   G    A+    EE GIS+
Sbjct:  295 VVWPDFTLGDVLNVFKQGKSHLSLVRDVNDAGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVDMQNQLPVQRSQFDMSRLQLLNANADKSALSTDEAKAVASHLMANVPQFEGINVSHVESIIAASPVVEVNKEDKHTGRSEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGAYKPDFSAHAGSERLRCVRISKASFDTVMSMSKQEEEEPHHASRAEPHGGGNT--------DGNNTDGSGNNKAGVTGYVRKSGPKPRAFSDEGSRHQADPATSGSVGAVGAGTKAAG----RITLSPSKIRRGLPTGASLKILQAATGVAMTTSSTTSTPMRSKHTEDEPLE--AQEASPREDTGAGASAVASNGTAEETGISM 685          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A835YX11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX11_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.480e-73
Identity = 125/228 (54.82%), Postives = 166/228 (72.81%), Query Frame = 1
Query:    4 VWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLP-VQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQFEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTI 684
            VWPD  LGDVL VFK  ++H+ +VRDVN+SG GDPFYEV GIITLEDIIEE+LGDEI+DETD   +V +     +R   + +RL LLNA+   + LS +EA AVA+HL ANV QF  ++   V +++AAS VV + +E      A PA A+ LYRRGR ST CTL+LTG++ V AGRD F+S++GPW+VLGADAL+  EG Y+PDFSA   S++LR +R+++A+F  +
Sbjct:  245 VWPDQPLGDVLKVFKGQRAHMAIVRDVNSSGPGDPFYEVAGIITLEDIIEEVLGDEILDETDTLEHVASTAQRAERCNVEATRLHLLNASTTENKLSREEASAVAAHLSANVEQFGALSKEAVTAVVAASTVVTLRREAS--AGAAPAAADYLYRRGRVSTACTLVLTGRLTVAAGRDAFQSESGPWSVLGADALLAAEGAYRPDFSASISSDQLRVIRMNRATFAAL 470          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A835ZG32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG32_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.140e-72
Identity = 131/243 (53.91%), Postives = 171/243 (70.37%), Query Frame = 1
Query:    1 VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLP--VQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQFEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQTPPA 723
            +VWPD  LGDVL VFKQG++H+ +VR VN++G GDP+YEV GIITLEDIIEEILGD+I+DE D  ++   +      R+ FD +RLQLLNA+A    LS +EA AVA+HL  NV QF G +   V +++AASPV+ + +  +  G A  A  + LYRRGR S  CTL+LTG++ V AGRD F SDAGPW+VL ADAL+  EG YKPDFSA   S+ LR VR+S+A+F+ +    ++   TPPA
Sbjct:  363 IVWPDQKLGDVLKVFKQGRAHMAVVRQVNDTGPGDPYYEVAGIITLEDIIEEILGDDILDEHDCTLDHVERTGHRAARAAFDATRLQLLNASAQEERLSREEAAAVAAHLSTNVEQFRGFSRERVAAVVAASPVLMLRRAGEAGGAA--AAEDYLYRRGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVV----KEAPVTPPA 599          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S1B913_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B913_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.540e-58
Identity = 116/245 (47.35%), Postives = 154/245 (62.86%), Query Frame = 1
Query:    4 VWPDYTLGDVLSVFKQGKSHLGLVRDVNNSG-EGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLPVQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQ-FEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQTPPALRI 732
            VWPD  LGDVL  FKQGK H+ +VRDVN S  + DPFYEV GIITLEDI+E ILGDEIVDETD +V VE  +PV R  FD SRL+LL+       LS DE +AV++HL  N    FE ++   +++++A + V E+       G+  P+   +LY RG+ + +CTL+L GK+ +LAG+DGFRS+ GPW+VL A ALV     Y PDF A   SE+ R +R     F    + +   G+  P  +I
Sbjct:  334 VWPDDPLGDVLRYFKQGKGHIAVVRDVNGSDPDRDPFYEVRGIITLEDILEVILGDEIVDETDVYVEVEKHVPVDRETFDWSRLRLLDDKIVDVHLSPDEVRAVSAHLRTNYADIFEKLDNIQLKTMVAGTVVAEIEAAAMESGKNMPSSQNLLYERGQETEVCTLLLNGKITILAGKDGFRSEVGPWSVLAAQALVAPG--YVPDFDAFVASEKCRMLRFQLPRFHVAVAATGGGGE--PTTKI 574          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S4D856_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D856_HETAK)

HSP 1 Score: 206 bits (524), Expect = 6.950e-57
Identity = 119/274 (43.43%), Postives = 169/274 (61.68%), Query Frame = 1
Query:    1 VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLP--VQRSEFDMSRLQLLNANADRSA-LSTDEAKAVASHLMANVPQFEG-------VNVSHVESIIAASPVVEVSKENKHMG-------------------RAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVE--DEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQTPPALR 729
            V +PD  LG+VL++FK+G+ H+ LVR VNN G GDP+YE +G+ITLEDI+EEILGDEIVDETD FV+V+++    V+ ++FD S+L LL+    R A L  +E  A+ ++LMANVP+F+        ++   VE I+  S V+E+  + +  G                    AEPAP E LYRRG  +    L+L+GK++V AGRDGFR++AGPWT L A AL     +G + PDF A+AG+E +R +R+ +  +        +EG  PP  R
Sbjct:  287 VAYPDQKLGEVLAMFKKGQGHMALVRKVNNDGPGDPYYEGMGLITLEDIVEEILGDEIVDETDVFVDVDDKTSRVVRETQFDYSKLTLLDDKLGRDATLGPEEVVAIRTYLMANVPEFQAPTKDGSPLSAEAVEYILRNSTVLEIEGQEEAAGGAPGALSARGXXXXXXXXXXAEPAPEEFLYRRGEVAAAAALVLSGKLLVRAGRDGFRAEAGPWTALAAGALTAATPQG-FAPDFDAYAGAEPVRLLRVPRQVY--------REGLRPPGDR 551          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S2SUL8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUL8_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.960e-55
Identity = 102/230 (44.35%), Postives = 153/230 (66.52%), Query Frame = 1
Query:    4 VWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLP--VQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQFE----GVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASF 675
            V+PD  LGDVL +FK+G+ H+ +VRD     + D  Y  VGIITLEDI+E ILGDEI+DETD +V+++ +    ++R +FD ++L L++       LS +E  AV +HL  N  QF+    G  ++  +     S +  +S   +  G ++P   ++LYRRGR S+  TL+L+G++ V+AG+DGFRSDAGPWTVLG DAL+++EG Y PDF+A+  +E +RC+R+S+  F
Sbjct:  329 VFPDEKLGDVLVMFKRGQGHMAIVRDTEEREDADNVYINVGIITLEDIVESILGDEIIDETDVYVHMDKKASSRIERKQFDYAQLSLMDPTLHDGFLSLEEVNAVTAHLCMNYRQFQETPGGERIAQDDVRKMVSKLTALSLVREGNGTSDPPGKDMLYRRGRASSTMTLVLSGRLAVVAGKDGFRSDAGPWTVLGCDALLQEEGGYIPDFTAYIATENVRCIRMSRFDF 558          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A1Z5KAI0_FISSO (Metal transporter CNNM n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAI0_FISSO)

HSP 1 Score: 196 bits (499), Expect = 5.050e-53
Identity = 109/239 (45.61%), Postives = 150/239 (62.76%), Query Frame = 1
Query:    4 VWPDYTLGDVLSVFKQGKSHLGLVRDVNNS-GEGDPFYEVVGIITLEDIIEEILGDEIVDETDAFVN-VENQLPVQRSEFDMSRLQLLNANADRSALSTDEAKAVASHLMAN-VPQFEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQ 711
            VWPD  LGDVL   K G+SH+ LVRDVNN  G+ DPFYEV GIITLEDIIEEILGDEIVDETDAFV+    +L  +   F+ +RL+LL++      LS +E +A+ +HL  N    +E ++    E +++ S V+ + +  + +G  +P P ++LY +G  + +CTL+L+GKV V  G + FR+D G W+VLG  AL      YK DF A   S   RC+RI++A F+     S  E Q
Sbjct:  355 VWPDDKLGDVLRELKTGRSHMALVRDVNNEDGDQDPFYEVKGIITLEDIIEEILGDEIVDETDAFVDGTHTELVTRTDGFEWARLRLLDSKLLDERLSVEETRAITAHLQRNHFSTWELLSDRQAELLVSGSQVITLPEVVREIG--QPLPRDLLYTKGEETDVCTLLLSGKVTVFVGEENFRTDLGSWSVLGIGALTNPN--YKADFDAFVSSGPCRCLRITRARFNAAVDASAAEEQ 589          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S3LGG6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGG6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.220e-51
Identity = 112/239 (46.86%), Postives = 149/239 (62.34%), Query Frame = 1
Query:    4 VWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEG-DPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLPVQRSE-FDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQFEGVNVSH-VESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQ 711
            VWPD  LGDVL   KQGKSH+ LV+DVNN  E  DPFYEV GIITLEDIIEEI+G EIVDETD +V+  + +PV R E F  + L+LL++      LS DE +AV +HL+ N      +   H +E +IA +PV  +    + +G+    P ++LY + + +  CTLIL+GKV VLAG D FR+D   W+VL + AL +    Y PDFSA+  S   RC+R+++A F      S  E Q
Sbjct:  383 VWPDDKLGDVLRDLKQGKSHMALVQDVNNEDESKDPFYEVKGIITLEDIIEEIIGVEIVDETDEYVDGTHSVPVDRGETFKWASLRLLDSKIVDETLSYDETQAVTAHLLRNYYDVVSLLTEHQLEHLIATTPVSVLPTATEELGKL--LPDDLLYEKNKPNDTCTLILSGKVKVLAGADNFRTDVSSWSVLASKALADK--AYAPDFSAYVSSGPCRCLRLTRARFLAAVDASTVERQ 617          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S2R398_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R398_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.380e-51
Identity = 107/238 (44.96%), Postives = 145/238 (60.92%), Query Frame = 1
Query:    1 VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEG-DPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLPVQRS-EFDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQ-FEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQE 705
            VVWPD  LGDVL   K G SH+ LVRDVNN  E  DPFYE+ GIITLEDIIE ILGDEIVDETDA+V+ E  + V R+ +FD ++L+LL++      LS +E +A+++HL  N     + ++   +  +I  +PV  +      +G +   P  +LY +G+    CTLIL+GKV VLAG D FRSD   W VL A+AL     +Y PDF+A+   E  RC+  ++ +F      S  E
Sbjct:    1 VVWPDDRLGDVLRKLKGGHSHMALVRDVNNDDETQDPFYEIKGIITLEDIIEIILGDEIVDETDAWVDGEQSVKVDRTVDFDWAKLRLLDSKIVDETLSQEEVRAISAHLRTNHSSAVQLLSDKQLNRMITLTPVTVLQASEMDIGNS--LPDNLLYEKGKPCGFCTLILSGKVTVLAGSDNFRSDISSWCVLAANALTNK--SYAPDFNAYVTGESCRCLIFTRHNFSAAIDSSAVE 234          
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Match: A0A7S2Y3V5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3V5_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.660e-51
Identity = 107/240 (44.58%), Postives = 149/240 (62.08%), Query Frame = 1
Query:    1 VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEG-DPFYEVVGIITLEDIIEEILGDEIVDETDAFVNVENQLPVQRSE-FDMSRLQLLNANADRSALSTDEAKAVASHLMANVPQ-FEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPAEVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGTYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQ 711
            VVWPD  LG VL   K GKSH+ LVRDVNN  E  DPFYE+ GIITLEDIIEEI+G EIVDETDAFV+  + +PV R+E F  + L+LL++      LS DE KAV +HL  N    F  +  + +  +I  +P+  +    + + +    P ++LY RG  +  CTL+L+GK+ V+AG+D FRSD   W++L  +AL+     Y PDF++   S   RC++I++A F +    S+ E Q
Sbjct:  113 VVWPDDALGGVLRDLKSGKSHMALVRDVNNEDESQDPFYEIKGIITLEDIIEEIIGHEIVDETDAFVDGTHSVPVDRAETFKWASLRLLDSKIVDERLSFDETKAVTAHLSKNFAAIFTFLTEAQLHRLILETPISVLPTAVQQLSK--DLPDDLLYERGVQTNTCTLVLSGKLTVIAGQDNFRSDVSSWSLLAGNALLSKH--YTPDFTSFVSSGPCRCLQITEARFASAVDASQLEKQ 348          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10440.624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ70_ECTSI8.860e-16167.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YX11_9STRA4.480e-7354.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG32_9STRA2.140e-7253.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1B913_9STRA5.540e-5847.35Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4D856_HETAK6.950e-5743.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SUL8_9STRA1.960e-5544.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5KAI0_FISSO5.050e-5345.61Metal transporter CNNM n=1 Tax=Fistulifera solaris... [more]
A0A7S3LGG6_9STRA1.220e-5146.86Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2R398_9STRA2.380e-5144.96Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2Y3V5_9STRA3.660e-5144.58Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10440contigS-firma_F_contig10440:226..4417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LQ70
Preferred nameCNNM2
PFAMsCBS,DUF21
Max annot lvl2759|Eukaryota
KEGG koko:K16302
KEGG TC9.A.40.3
GOsGO:0000003,GO:0000166,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0007275,GO:0007548,GO:0007568,GO:0008144,GO:0008150,GO:0008324,GO:0008340,GO:0008406,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010035,GO:0010038,GO:0010259,GO:0010960,GO:0015075,GO:0015077,GO:0015081,GO:0015095,GO:0015318,GO:0015672,GO:0015693,GO:0016020,GO:0016323,GO:0017076,GO:0019725,GO:0022414,GO:0022857,GO:0022890,GO:0030001,GO:0030425,GO:0030554,GO:0031214,GO:0032026,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034220,GO:0034505,GO:0035262,GO:0035639,GO:0035725,GO:0036094,GO:0036477,GO:0040008,GO:0040014,GO:0040018,GO:0040026,GO:0040028,GO:0042221,GO:0042475,GO:0042476,GO:0042592,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043902,GO:0044297,GO:0044424,GO:0044425,GO:0044459,GO:0044463,GO:0044464,GO:0045137,GO:0045927,GO:0046873,GO:0048513,GO:0048518,GO:0048580,GO:0048582,GO:0048608,GO:0048638,GO:0048639,GO:0048646,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050801,GO:0050896,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0055065,GO:0055080,GO:0055082,GO:0055085,GO:0061062,GO:0061063,GO:0061458,GO:0065007,GO:0065008,GO:0070166,GO:0070838,GO:0071944,GO:0072507,GO:0072511,GO:0080154,GO:0097159,GO:0097186,GO:0097367,GO:0097447,GO:0097458,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0120025,GO:0120038,GO:1901265,GO:1901363,GO:1903830,GO:1905516,GO:2000026,GO:2000241,GO:2000243
Evalue1.45e-161
EggNOG OGsCOG1253@1|root,KOG2118@2759|Eukaryota
Descriptionmagnesium ion homeostasis
COG categoryE
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF21
Ec32 orthologEc-26_005930.1
Exons6
Model size1326
Cds size1326
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10440.624.1prot_S-firma_F_contig10440.624.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10440 226..4417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.353804-CDS-S-firma_F_contig10440:225..3241622815578.353804-CDS-S-firma_F_contig10440:225..324Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 226..324 +
1696949430.3630805-CDS-S-firma_F_contig10440:225..3241696949430.3630805-CDS-S-firma_F_contig10440:225..324Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 226..324 +
1622815578.3639371-CDS-S-firma_F_contig10440:759..8731622815578.3639371-CDS-S-firma_F_contig10440:759..873Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 760..873 +
1696949430.3768537-CDS-S-firma_F_contig10440:759..8731696949430.3768537-CDS-S-firma_F_contig10440:759..873Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 760..873 +
1622815578.3742528-CDS-S-firma_F_contig10440:1525..16541622815578.3742528-CDS-S-firma_F_contig10440:1525..1654Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 1526..1654 +
1696949430.3870597-CDS-S-firma_F_contig10440:1525..16541696949430.3870597-CDS-S-firma_F_contig10440:1525..1654Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 1526..1654 +
1622815578.387449-CDS-S-firma_F_contig10440:2293..23651622815578.387449-CDS-S-firma_F_contig10440:2293..2365Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 2294..2365 +
1696949430.3976276-CDS-S-firma_F_contig10440:2293..23651696949430.3976276-CDS-S-firma_F_contig10440:2293..2365Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 2294..2365 +
1622815578.3991466-CDS-S-firma_F_contig10440:2935..30561622815578.3991466-CDS-S-firma_F_contig10440:2935..3056Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 2936..3056 +
1696949430.415989-CDS-S-firma_F_contig10440:2935..30561696949430.415989-CDS-S-firma_F_contig10440:2935..3056Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 2936..3056 +
1622815578.4140592-CDS-S-firma_F_contig10440:3626..44171622815578.4140592-CDS-S-firma_F_contig10440:3626..4417Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 3627..4417 +
1696949430.4295206-CDS-S-firma_F_contig10440:3626..44171696949430.4295206-CDS-S-firma_F_contig10440:3626..4417Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10440 3627..4417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10440.624.1

>prot_S-firma_F_contig10440.624.1 ID=prot_S-firma_F_contig10440.624.1|Name=mRNA_S-firma_F_contig10440.624.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=442bp
VVWPDYTLGDVLSVFKQGKSHLGLVRDVNNSGEGDPFYEVVGIITLEDII
EEILGDEIVDETDAFVNVENQLPVQRSEFDMSRLQLLNANADRSALSTDE
AKAVASHLMANVPQFEGVNVSHVESIIAASPVVEVSKENKHMGRAEPAPA
EVLYRRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEG
TYKPDFSAHAGSERLRCVRISKASFDTITSMSRQEGQTPPALRIEADGGN
AAADGGGVLDGSSNMPSGNGGSASGSASARKSSANPRAFSDEGGARHSIT
STGSGSGGGGGSGAGGGTPGTRIALSPPKKRGLPSGASLKILQAATGVAV
IPSAATPTTQHTQPDNKLPLDNTAQAGSPWLEVETGIETCAAAEDEEAGI
SLVTTAAGVVPPPSSRVVAGSEGDVESGGSEPPPPQREDGAP
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mRNA from alignment at S-firma_F_contig10440:226..4417+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10440.624.1 ID=mRNA_S-firma_F_contig10440.624.1|Name=mRNA_S-firma_F_contig10440.624.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4192bp|location=Sequence derived from alignment at S-firma_F_contig10440:226..4417+ (Sphaerotrichia firma ET2_F female)
GTGGTGTGGCCCGATTACACCCTGGGAGACGTCCTGAGCGTGTTCAAGCA GGGGAAGAGCCACTTGGGGTTGGTGCGGGACGTGAACAACTCCGGCGAGG TATGTATCTCTTGTCGTGCTAGATATACACATGTATCGTGTCATGTATCT TGGAATTTAGCGGTGTTGGGTTGGGGAATGCGGCGGGGACATCCGGTAAG ATAGCCAGCCAGAAGTCATGTGCTTGGATGTCTCGCCTTTCCATGCGAGG AAGGGTGGGTATGCTTCGGTAATGCTGTTTGTTGTCGAGCGGGACAGCTT GACCTCAGCTAGCCTGTATTTGCTTTGGCGGCGGCTGTGTGTGTGTGTGC CTGTGTTGCAACCTACCTAGTCCGTGTTCAGTGTTACTTGATGCTCAAAC CTGACTGCCCCGCCCCCGGTTCTTACGTACGTCATGCCCCGTTCGCCGTT CGCGCATTCCCTTGCATGGTCATGATCATCATGATCGTCGTGGTCATGAT CGGTATCATTGTCTGATGAACACCCTATGGCCAGGGAGATCCGTTCTACG AAGTTGTCGGCATCATCACTCTGGAAGACATCATCGAGGAGATATTGGGG GACGAGATTGTCGACGAAACCGACGCCTTTGTCAATGTGGAAAACCAGGT AACGCCGGAAGATAACATTCCCGCATACCGCCAAAGATTTGAAAAATACA AACCAAGAAACAACATCGGCTTTGCTGGTTTTGTACGGTAGTCGAGGACG GCGGGGGAGCGTGAGTGTGTCTACAACAGCAGTAGTCCCCCTGGAATGAC TTTTTGCACAGGATGGGCGTCGACGGCTAGTGTTTGAGGGGTATAAAATA TTCCAAAGGTCCAACATCGTTGCTGCAAAGACAACGCGCTACGCCCATGT TCAGACTGGTGTGGCTGCTGCGGGAATAGGGATTGCGGGCACCCTTGACG TCAAAACCGTCCACACTGCCTTTTCCTTTTCCTCTCTCTCGAAGTCTTCA TCGCCGTTCAAAGTAGTGCGCCAACGTGGCGAGTGTCTGTGCGTTGAGGT TGTCCAATGGTATCGATCCCTCATACGTAGTACTCCAGTACAACCCCCCT ACTATGTTTCGGGAGGCTGCTCTTCTCAGCGCAGCAGCGTGATCAGAGGC TTCAGGGTTCCTCTTCGTTTTGCTACCATAGCTTTCGGCATCGATCGCAT GCACGGTTGTCTTCTTTTGTTTGCCTGACCGGTGGATGTCTGGATTGCCA ATCTTTATCTTGCCGCCTGTTTGCTTTGTACCTTGCTTCTGTTTTCGCAG CTTCCGGTGCAAAGGTCAGAGTTCGACATGTCCCGCCTTCAGCTGCTGAA CGCTAACGCCGACAGGTCGGCCCTGTCGACGGACGAGGCAAAGGCCGTGG CGTCGCACCTCATGGCCAATGTACCCCAGGTGATGATGGTAGTTATGATG GTGATCACGTGGCACCTGGTGGAGCTAATGTAGCCAAACGAAGTCTCAAG CACGGACGTGTCCTAGTGATGCGCCGAGGGGCTGTAGCGTTAACAAGCCA GCCTCGTTGCAACGGCACGCATGGCATGGCATGGCATGGCACCTTCCTCC GTTTTTGTTCCCGCTCGTGGTCTTGCCTGCCTTGTGTTTCGTTGCGTTCT GTGCTGTTGTTTTGCGTTCTCGCTACAGCAGTATTCATTCCTACGTCTTC ATCTTCGCACCCTTGCGGTAGTGCCGCTAACGCTTCCCGGCCTGCATCCA TTGCGATGCAAACACCACCTTGCTCGAACTGGGGATGCACAACAGCGCCC GTTTTTTCCCATCCCCAAGTCCCCACGTGAAGATGGCGTTCTCGACCCGA TTCGAGACAACCTCGGAGGGAGTCAACGCTATCGGTTTGTGTCGAGCCAT TTGACTGCACTGCACCCCCCCCCCCCCCCCCCCCTAAAGTCTTTCCGCGA AACCACACACACCACCTTTTGATTATCTCACGCATATTCGGGTTTGTTGG TATCTTTACAACGCACCTTGTTGCCCTCCCTTTCTTAATTTCTTGTCTCC CCCTGTCCGGCGCTCCAGTTCGAAGGCGTCAACGTGAGCCACGTGGAGTC CATCATCGCGGCCTCACCCGTGGTCGAAGTCAGCAAAGAGGTGGGACGGG TTGTGCGATACATTCGTCTTGATACCTCCTCGCTGGCAGGGCGAATCCGC CCTCCCCCTCCCCCTCTTTTTGGGGCGTGTTGGGCGATGAGCGGTTGCGC GGGAGCGTGTCCTTTGTTAGACGTGCTTCCCGGGTGCGAGCGCTGTGTTG TAGTAGCGGCCGTACGCGAGCAAAGCACGACTCTTTTTTCGCGCCCGAGG CAATTGACATCATTTGACATCTTGCATCGCGAGGCGGCTGTTGTTGTAGC TCGGGCTTGTTTGCTTTTGCTTCGATAGTCGGGCCCTGGTTCTTGGTTCG CGTTTTTGTGGGATTTTCAAGCCCTTTCTGTGATTGAGGTCCTCAAGAAA CAAAGTACGTATGCCGTACACATGCCTGCTTTTGTCTTGAGATGGTCCCT AGTGTTGGTGCCTGTTTTTGCCGTGCCTGAGGTGCTTGCTGCTTGTCGCA CGACGATCAAGACATTACCGATTCAGGATCGAACCCCTCTCCCATTGGTT TTTTCGTGACACCTGCCCCTGTAAACCCGTCATCATCACCATCACGATAA ATTGCGACAGAACAAACACATGGGCCGGGCGGAACCAGCGCCGGCAGAGG TGTTGTATCGCCGCGGCCGCACCAGCACCATGTGCACGCTCATCCTCACG GGGAAGGTTGTCGTCTTGGCCGGCAGAGACGGTACGTACTGTATGTTACA CATACGAAGTAAATATGATGCGAAAGGTATGTAGGAAGGTAGGTAGGTCG CTGTTGAATAGTGAGAGCAGATGCGGCCGAACATTGTAGTAAAACCAGAG AGCGGTGTGTACGCAGAGCTTCCTGCTTGCTTTGAGGTGCGTTTTGGGGT GAGCGCGTGCTACTCTTTGTTGCGCATGTGTTCTTCTGGAGAAGTCATTG CCTGCGACTGGCACTTGATCCGCGAACAGGATGGTTTCGGTCCTCCTTCA CGACGAGGATTGGTTCATTGATGTCGTTGGCAGCAGATCACATCAGATCC GGTTGGATCTAAGACGGGCAACGCTTTTTGTCATCGACCAGTTGACCTTG CTATTTGTGTTGCTGCCACAACCACCAAATCCTACCCCTCTCAGAGCCGG TGTTCACGAATGCGCACTTGTAAATTGTCGCCTGAATAAAGAGCCCGTGC GCTCTGTCTCTCAATTTTTCCTGACGCCTTGTCTCGCGCCCACCGGGCAC CTCGGAAAACCTAAAAACCTCGAAAAAACGCCAATGCCGCCGACGACGCA GGCTTTCGCTCGGACGCCGGCCCTTGGACGGTTCTTGGCGCGGACGCCTT GGTCGAGGACGAGGGCACCTACAAGCCCGACTTCTCCGCGCACGCGGGGA GCGAGCGCCTGCGCTGCGTGCGCATCAGCAAGGCGTCGTTCGACACCATC ACGTCCATGTCCAGGCAGGAGGGCCAGACCCCTCCCGCCCTGAGAATCGA GGCGGACGGCGGGAATGCCGCCGCTGACGGCGGCGGTGTCCTCGATGGCA GCAGCAACATGCCGAGCGGAAACGGCGGCAGCGCCAGCGGCAGCGCCAGC GCGAGAAAGAGCAGCGCCAACCCGAGGGCTTTCTCGGATGAGGGGGGAGC GAGGCATTCCATCACGTCGACCGGAAGCGGCAGCGGCGGTGGCGGCGGGA GCGGGGCGGGAGGAGGGACCCCGGGGACGAGAATAGCCCTGTCCCCGCCG AAAAAGAGGGGATTGCCTTCCGGCGCGTCTCTCAAGATACTGCAGGCGGC GACCGGGGTCGCCGTGATCCCTTCAGCGGCAACTCCGACGACGCAACATA CGCAACCCGACAACAAGCTTCCGCTGGACAACACCGCGCAGGCGGGGTCG CCCTGGCTGGAGGTAGAGACCGGAATCGAGACTTGTGCTGCTGCGGAGGA CGAGGAAGCCGGGATAAGTCTGGTGACCACGGCAGCGGGAGTGGTGCCCC CTCCAAGCAGTCGGGTGGTGGCGGGGAGCGAAGGCGACGTGGAAAGCGGT GGCAGCGAGCCGCCGCCGCCGCAGCGGGAAGATGGTGCCCCT
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Coding sequence (CDS) from alignment at S-firma_F_contig10440:226..4417+

>mRNA_S-firma_F_contig10440.624.1 ID=mRNA_S-firma_F_contig10440.624.1|Name=mRNA_S-firma_F_contig10440.624.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2652bp|location=Sequence derived from alignment at S-firma_F_contig10440:226..4417+ (Sphaerotrichia firma ET2_F female)
GTGGTGTGGCCCGATTACACCCTGGGAGACGTCCTGAGCGTGTTCAAGCA
GGGGAAGAGCCACTTGGGGTTGGTGCGGGACGTGAACAACTCCGGCGAGG
TGGTGTGGCCCGATTACACCCTGGGAGACGTCCTGAGCGTGTTCAAGCAG
GGGAAGAGCCACTTGGGGTTGGTGCGGGACGTGAACAACTCCGGCGAGGG
AGATCCGTTCTACGAAGTTGTCGGCATCATCACTCTGGAAGACATCATCG
AGGAGATATTGGGGGACGAGATTGTCGACGAAACCGACGCCTTTGTCAAT
GTGGAAAACCAGGGAGATCCGTTCTACGAAGTTGTCGGCATCATCACTCT
GGAAGACATCATCGAGGAGATATTGGGGGACGAGATTGTCGACGAAACCG
ACGCCTTTGTCAATGTGGAAAACCAGCTTCCGGTGCAAAGGTCAGAGTTC
GACATGTCCCGCCTTCAGCTGCTGAACGCTAACGCCGACAGGTCGGCCCT
GTCGACGGACGAGGCAAAGGCCGTGGCGTCGCACCTCATGGCCAATGTAC
CCCAGCTTCCGGTGCAAAGGTCAGAGTTCGACATGTCCCGCCTTCAGCTG
CTGAACGCTAACGCCGACAGGTCGGCCCTGTCGACGGACGAGGCAAAGGC
CGTGGCGTCGCACCTCATGGCCAATGTACCCCAGTTCGAAGGCGTCAACG
TGAGCCACGTGGAGTCCATCATCGCGGCCTCACCCGTGGTCGAAGTCAGC
AAAGAGTTCGAAGGCGTCAACGTGAGCCACGTGGAGTCCATCATCGCGGC
CTCACCCGTGGTCGAAGTCAGCAAAGAGAACAAACACATGGGCCGGGCGG
AACCAGCGCCGGCAGAGGTGTTGTATCGCCGCGGCCGCACCAGCACCATG
TGCACGCTCATCCTCACGGGGAAGGTTGTCGTCTTGGCCGGCAGAGACGA
ACAAACACATGGGCCGGGCGGAACCAGCGCCGGCAGAGGTGTTGTATCGC
CGCGGCCGCACCAGCACCATGTGCACGCTCATCCTCACGGGGAAGGTTGT
CGTCTTGGCCGGCAGAGACGGCTTTCGCTCGGACGCCGGCCCTTGGACGG
TTCTTGGCGCGGACGCCTTGGTCGAGGACGAGGGCACCTACAAGCCCGAC
TTCTCCGCGCACGCGGGGAGCGAGCGCCTGCGCTGCGTGCGCATCAGCAA
GGCGTCGTTCGACACCATCACGTCCATGTCCAGGCAGGAGGGCCAGACCC
CTCCCGCCCTGAGAATCGAGGCGGACGGCGGGAATGCCGCCGCTGACGGC
GGCGGTGTCCTCGATGGCAGCAGCAACATGCCGAGCGGAAACGGCGGCAG
CGCCAGCGGCAGCGCCAGCGCGAGAAAGAGCAGCGCCAACCCGAGGGCTT
TCTCGGATGAGGGGGGAGCGAGGCATTCCATCACGTCGACCGGAAGCGGC
AGCGGCGGTGGCGGCGGGAGCGGGGCGGGAGGAGGGACCCCGGGGACGAG
AATAGCCCTGTCCCCGCCGAAAAAGAGGGGATTGCCTTCCGGCGCGTCTC
TCAAGATACTGCAGGCGGCGACCGGGGTCGCCGTGATCCCTTCAGCGGCA
ACTCCGACGACGCAACATACGCAACCCGACAACAAGCTTCCGCTGGACAA
CACCGCGCAGGCGGGGTCGCCCTGGCTGGAGGTAGAGACCGGAATCGAGA
CTTGTGCTGCTGCGGAGGACGAGGAAGCCGGGATAAGTCTGGTGACCACG
GCAGCGGGAGTGGTGCCCCCTCCAAGCAGTCGGGTGGTGGCGGGGAGCGA
AGGCGACGTGGAAAGCGGTGGCAGCGAGCCGCCGCCGCCGCAGCGGGAAG
ATGGTGCCCCTGCTTTCGCTCGGACGCCGGCCCTTGGACGGTTCTTGGCG
CGGACGCCTTGGTCGAGGACGAGGGCACCTACAAGCCCGACTTCTCCGCG
CACGCGGGGAGCGAGCGCCTGCGCTGCGTGCGCATCAGCAAGGCGTCGTT
CGACACCATCACGTCCATGTCCAGGCAGGAGGGCCAGACCCCTCCCGCCC
TGAGAATCGAGGCGGACGGCGGGAATGCCGCCGCTGACGGCGGCGGTGTC
CTCGATGGCAGCAGCAACATGCCGAGCGGAAACGGCGGCAGCGCCAGCGG
CAGCGCCAGCGCGAGAAAGAGCAGCGCCAACCCGAGGGCTTTCTCGGATG
AGGGGGGAGCGAGGCATTCCATCACGTCGACCGGAAGCGGCAGCGGCGGT
GGCGGCGGGAGCGGGGCGGGAGGAGGGACCCCGGGGACGAGAATAGCCCT
GTCCCCGCCGAAAAAGAGGGGATTGCCTTCCGGCGCGTCTCTCAAGATAC
TGCAGGCGGCGACCGGGGTCGCCGTGATCCCTTCAGCGGCAACTCCGACG
ACGCAACATACGCAACCCGACAACAAGCTTCCGCTGGACAACACCGCGCA
GGCGGGGTCGCCCTGGCTGGAGGTAGAGACCGGAATCGAGACTTGTGCTG
CTGCGGAGGACGAGGAAGCCGGGATAAGTCTGGTGACCACGGCAGCGGGA
GTGGTGCCCCCTCCAAGCAGTCGGGTGGTGGCGGGGAGCGAAGGCGACGT
GGAAAGCGGTGGCAGCGAGCCGCCGCCGCCGCAGCGGGAAGATGGTGCCC
CT
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