mRNA_S-firma_F_contig10430.617.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10430.617.1
Unique NamemRNA_S-firma_F_contig10430.617.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: D7FYJ6_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 5.390e-96
Identity = 155/168 (92.26%), Postives = 164/168 (97.62%), Query Frame = 1 
Query:  154 DTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLLPWDTPSASSAH 657
            DTLRLLTLWFAHGGFESV+REMSLG+Q CGVDTWLGVVPQLIARVHAASPRVTKLLR+LLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMR QYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGML+RLQ+LH+LLPW+TP AS+ +
Sbjct: 1199 DTLRLLTLWFAHGGFESVHREMSLGIQACGVDTWLGVVPQLIARVHAASPRVTKLLRELLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRKQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLRRLQMLHDLLPWETPPASAVY 1366
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A6H5K2T8_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T8_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 2.040e-80
Identity = 138/146 (94.52%), Postives = 144/146 (98.63%), Query Frame = 1 
Query:   67 PSAHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIK 504
            PSAHVIHAMRGFFRSIALG+NQSMANVLQDTLRLLTLWFAHGGFESV+REMSLG+Q CGVDTWLGVVPQLIARVHAASPRVTKLLR+LLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMR +YPVLVEEASLVSR+MIK
Sbjct: 1037 PSAHVIHAMRGFFRSIALGKNQSMANVLQDTLRLLTLWFAHGGFESVHREMSLGIQACGVDTWLGVVPQLIARVHAASPRVTKLLRELLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRKKYPVLVEEASLVSRSMIK 1182
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A0D2UH62_CAPO3 (DNA-directed RNA polymerase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UH62_CAPO3)

HSP 1 Score: 213 bits (543), Expect = 1.370e-59
Identity = 107/192 (55.73%), Postives = 142/192 (73.96%), Query Frame = 1 
Query:   49 NSNQPQPSAHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            N+NQ Q  AH+  A+ GFFRSIAL Q  S    LQDTLRLLTLWF +G  + V+  M  G++T  +DTWL V+PQLIAR+H  SP V +L+ QLL+ IG++HPQALIYP+TVASK+ S  R++AA A+M ++R     LV++A LVS+ +I+VA+ W E+WHE LEEASR+YFG+ N+EGML +L+ LH  L
Sbjct: 3305 NANQKQVRAHIAPALTGFFRSIALMQGNS----LQDTLRLLTLWFKYGSHQEVHDAMVEGIKTVSIDTWLQVIPQLIARIHTPSPLVGRLISQLLISIGKEHPQALIYPVTVASKSQSPARRDAAYAIMDNIRNHAGTLVDQALLVSQELIRVAILWHEMWHEHLEEASRLYFGERNIEGMLAKLEPLHQTL 3492
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A4P9WDI0_9FUNG (Armadillo-type protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WDI0_9FUNG)

HSP 1 Score: 212 bits (539), Expect = 4.420e-59
Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:   73 AHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            AHV+ +++GFFRSIAL    S  N LQDTLRLLTLWF +G  + VN  +  G  T  +DTWL V+PQLIAR+H  SP V +L+ QLL  +G++HPQAL+Y +TVASK+ S PR++AA A++  MRL   +LVE+A LVS+ +I+VA+ W E+WHEGLEEASRMYFGD NVEGM   L+ LH +L
Sbjct: 1362 AHVVPSVQGFFRSIAL----SKGNSLQDTLRLLTLWFKYGYQQDVNIAIGEGFNTVSIDTWLQVIPQLIARIHTPSPHVRRLIHQLLSDVGKEHPQALVYSLTVASKSQSTPRKKAALAIIDKMRLHSALLVEQALLVSQELIRVAILWHEMWHEGLEEASRMYFGDQNVEGMFATLEPLHQML 1541
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A0G2H5Y8_9EURO (Non-specific serine/threonine protein kinase n=1 Tax=Phaeomoniella chlamydospora TaxID=158046 RepID=A0A0G2H5Y8_9EURO)

HSP 1 Score: 211 bits (537), Expect = 8.470e-59
Identity = 103/189 (54.50%), Postives = 138/189 (73.02%), Query Frame = 1 
Query:   58 QPQPSAHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            +P  + HV+ A+RGFFRSIAL Q  +    LQDTLRLLTLWFAHGG + VNR ++ G+ +  +DTWL V+PQLIAR++  +P+V + +  LL ++G+KHPQAL+YP+TVA K++   R  +A  +M  MR   P LVE+A LVS  +I+VA+ W E+WHEGLEEASR+YFGD NVEGM   L  LH++L
Sbjct: 1709 EPVVNDHVVPAVRGFFRSIALSQKSA----LQDTLRLLTLWFAHGGHDEVNRTITEGLPSVSIDTWLEVIPQLIARINQHNPKVRQAVHHLLAQVGKKHPQALVYPLTVAMKSNVTRRSLSAHHIMDSMRQHSPKLVEQADLVSHELIRVAVLWHELWHEGLEEASRLYFGDHNVEGMFATLAPLHDML 1893
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A0E9NCA5_SAICN (Serine/threonine-protein kinase TOR n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NCA5_SAICN)

HSP 1 Score: 207 bits (527), Expect = 1.860e-57
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = 1 
Query:   70 SAHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            +AH+I A+RGFFRSIAL    S  N LQDTLRLLTLWF  G  + +N  ++ G  +  +DTWL V+PQLIAR+H   P V +L+ QLL  +GR HPQAL+YP+TVASK+ S  RQ AA A+M +MR    +LVE+A LVS+ +I+VA+ W E WHEGLEEASR+YFGD N++ M   L+ LH +L
Sbjct: 1877 TAHIIPAVRGFFRSIAL----SKGNSLQDTLRLLTLWFKFGNNQDINNAITEGFTSVRIDTWLEVIPQLIARIHVTGPLVRRLIHQLLSDVGRAHPQALVYPVTVASKSQSVSRQRAALAIMDNMRNHSAILVEQALLVSKELIRVAILWHEQWHEGLEEASRLYFGDHNIQAMFATLEPLHEML 2057
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A0L0HAP6_SPIPD (Serine/threonine-protein kinase TOR n=3 Tax=Spizellomycetales TaxID=34478 RepID=A0A0L0HAP6_SPIPD)

HSP 1 Score: 206 bits (524), Expect = 4.670e-57
Identity = 102/184 (55.43%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:   73 AHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            AHV+ +++GFFRSIAL    S  N LQDTLRLLTLWF +G  + VN  +  G  +  +DTWL V+PQLIAR+H  SP V +L+ QLL  +G++HPQAL+Y +TVASK+ S  R+++A A++  MR+   VLVE+A LVS+ +I+VA+ W E+WHEGLEEASR+YFGD NVEGM   L+ LH++L
Sbjct: 1659 AHVVPSVQGFFRSIAL----SKGNSLQDTLRLLTLWFKYGFQQDVNIAIGEGFNSVSIDTWLQVIPQLIARIHTPSPHVRRLIHQLLSDVGKEHPQALVYSLTVASKSQSTSRKKSALAIIEKMRMHSAVLVEQALLVSQELIRVAILWHEMWHEGLEEASRLYFGDHNVEGMFTTLEPLHHML 1838
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A7S1XV32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV32_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.940e-57
Identity = 101/185 (54.59%), Postives = 125/185 (67.57%), Query Frame = 1 
Query:  118 LGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLLPWDTPSASSAHQSDAA 672
            +G   S A+ LQDTLRLLTLWF H G   V+ EM  GM    +DTWL V+PQLIAR+H   PRV  L+ +LL R+G+ HPQALIYPITVASK SS PR+ AA  ++ +MR   P LVEE+++VS  +I+VA+TW E+WHEGLE+ASR+YFG+ N   ML  L  LH     D     S H  DAA
Sbjct:   49 VGTPVSSADRLQDTLRLLTLWFNHPGVPKVHDEMERGMARISMDTWLDVIPQLIARLHTPEPRVNALMIKLLSRVGQAHPQALIYPITVASKTSSAPRRRAALQILEEMRKYDPELVEESNMVSADIIRVAITWHEMWHEGLEKASRLYFGEKNAAAMLAVLLQLH-----DNMLEGSTHGGDAA 228
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: A0A1Y1YP63_9FUNG (Non-specific serine/threonine protein kinase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YP63_9FUNG)

HSP 1 Score: 206 bits (523), Expect = 6.360e-57
Identity = 103/185 (55.68%), Postives = 136/185 (73.51%), Query Frame = 1 
Query:   70 SAHVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            +AH++ A++GFFRSIAL    S  N LQDTLRLLTLWF  G  + V+  +S G  T  +DTWL V+PQLIAR+HA SP V +L+  LL  +G++HPQALIYP+TVASK+ +  R+ AA A+M  MR    +LVE+A LVS+ +I+VA+ W E+WHEGLEEASR+YFGD ++EGM   L+ LH +L
Sbjct: 1675 TAHIVPAVQGFFRSIAL----SSGNSLQDTLRLLTLWFKFGYQQEVSVAISEGFSTVSIDTWLQVIPQLIARIHAPSPNVRRLIHHLLTDVGKEHPQALIYPLTVASKSLNASRKRAALAIMDKMRSHSAMLVEQALLVSQELIRVAILWHEMWHEGLEEASRLYFGDRSIEGMFATLEPLHQML 1855
[Close]
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Match: D0NR66_PHYIT (Non-specific serine/threonine protein kinase n=3 Tax=Phytophthora TaxID=4783 RepID=D0NR66_PHYIT)

HSP 1 Score: 206 bits (523), Expect = 6.500e-57
Identity = 98/183 (53.55%), Postives = 137/183 (74.86%), Query Frame = 1 
Query:   76 HVIHAMRGFFRSIALGQNQSMANVLQDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAASPRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRLQYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQRLQVLHNLL 624
            ++  A+ GFFRS+ALG+++  ANV QD LR+LTLWFAHG    V+  +  G ++  ++TWL V+PQLIAR+H   PR+ K L +LLV +G++HP ALIYP++VA K+S   RQ+AA A+M+ MR  Y  LV+EA LVSR +I+VA+ W E+WHEGLEEASR+YFG+ NV+GM + L+ LH ++
Sbjct: 2263 YIAPAIEGFFRSVALGRSRWAANVQQDILRVLTLWFAHGHRTDVHAALEKGFRSVSIETWLIVIPQLIARIHTPYPRIQKQLHRLLVAVGKQHPHALIYPLSVALKSSVSERQQAAEAIMSTMRTNYVELVDEALLVSRELIRVAILWHEMWHEGLEEASRLYFGEHNVDGMAEVLRPLHAMM 2445
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10430.617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ6_ECTSI5.390e-9692.26Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5K2T8_9PHAE2.040e-8094.52Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0D2UH62_CAPO31.370e-5955.73DNA-directed RNA polymerase n=2 Tax=Capsaspora owc... [more]
A0A4P9WDI0_9FUNG4.420e-5957.61Armadillo-type protein (Fragment) n=1 Tax=Blyttiom... [more]
A0A0G2H5Y8_9EURO8.470e-5954.50Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0E9NCA5_SAICN1.860e-5755.68Serine/threonine-protein kinase TOR n=2 Tax=Saitoe... [more]
A0A0L0HAP6_SPIPD4.670e-5755.43Serine/threonine-protein kinase TOR n=3 Tax=Spizel... [more]
A0A7S1XV32_9STRA4.940e-5754.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1Y1YP63_9FUNG6.360e-5755.68Non-specific serine/threonine protein kinase n=1 T... [more]
D0NR66_PHYIT6.500e-5753.55Non-specific serine/threonine protein kinase n=3 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10430contigS-firma_F_contig10430:1212..4483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FYJ6
Preferred nameTOR1
PFAMsDUF3385,FAT,FATC,FRB_dom,PI3_PI4_kinase
Max annot lvl2759|Eukaryota
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
Evalue8.84e-97
EggNOG OGsCOG5032@1|root,KOG0891@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
COG categoryBDLTU
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTarget of rapamycin 2
Ec32 orthologEc-23_002960.1
Exons7
Model size760
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.646747-CDS-S-firma_F_contig10430:1211..13641622815577.646747-CDS-S-firma_F_contig10430:1211..1364Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 1212..1364 +
1696949429.9109173-CDS-S-firma_F_contig10430:1211..13641696949429.9109173-CDS-S-firma_F_contig10430:1211..1364Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 1212..1364 +
1622815577.6666827-CDS-S-firma_F_contig10430:1662..17131622815577.6666827-CDS-S-firma_F_contig10430:1662..1713Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 1663..1713 +
1696949429.941595-CDS-S-firma_F_contig10430:1662..17131696949429.941595-CDS-S-firma_F_contig10430:1662..1713Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 1663..1713 +
1622815577.6868927-CDS-S-firma_F_contig10430:2059..22151622815577.6868927-CDS-S-firma_F_contig10430:2059..2215Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 2060..2215 +
1696949429.9563947-CDS-S-firma_F_contig10430:2059..22151696949429.9563947-CDS-S-firma_F_contig10430:2059..2215Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 2060..2215 +
1622815577.6991258-CDS-S-firma_F_contig10430:2752..28091622815577.6991258-CDS-S-firma_F_contig10430:2752..2809Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 2753..2809 +
1696949429.9701507-CDS-S-firma_F_contig10430:2752..28091696949429.9701507-CDS-S-firma_F_contig10430:2752..2809Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 2753..2809 +
1622815577.7112277-CDS-S-firma_F_contig10430:3011..30981622815577.7112277-CDS-S-firma_F_contig10430:3011..3098Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 3012..3098 +
1696949429.9833558-CDS-S-firma_F_contig10430:3011..30981696949429.9833558-CDS-S-firma_F_contig10430:3011..3098Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 3012..3098 +
1622815577.7225423-CDS-S-firma_F_contig10430:3601..37031622815577.7225423-CDS-S-firma_F_contig10430:3601..3703Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 3602..3703 +
1696949429.9971645-CDS-S-firma_F_contig10430:3601..37031696949429.9971645-CDS-S-firma_F_contig10430:3601..3703Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 3602..3703 +
1622815577.733464-CDS-S-firma_F_contig10430:4329..44821622815577.733464-CDS-S-firma_F_contig10430:4329..4482Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 4330..4482 +
1696949430.0058668-CDS-S-firma_F_contig10430:4329..44821696949430.0058668-CDS-S-firma_F_contig10430:4329..4482Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10430 4330..4482 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10430.617.1prot_S-firma_F_contig10430.617.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10430 1212..4482 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10430.617.1

>prot_S-firma_F_contig10430.617.1 ID=prot_S-firma_F_contig10430.617.1|Name=mRNA_S-firma_F_contig10430.617.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=253bp
GGGSGGGGGPGGEGSVNSNQPQPSAHVIHAMRGFFRSIALGQNQSMANVL
QDTLRLLTLWFAHGGFESVNREMSLGMQTCGVDTWLGVVPQLIARVHAAS
PRVTKLLRQLLVRIGRKHPQALIYPITVASKNSSRPRQEAAGAVMADMRL
QYPVLVEEASLVSRAMIKVAMTWPEVWHEGLEEASRMYFGDGNVEGMLQR
LQVLHNLLPWDTPSASSAHQSDAARKRGPSGDGGDSSSSCSSEAGGGGGG
GGG
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mRNA from alignment at S-firma_F_contig10430:1212..4483+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10430.617.1 ID=mRNA_S-firma_F_contig10430.617.1|Name=mRNA_S-firma_F_contig10430.617.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3272bp|location=Sequence derived from alignment at S-firma_F_contig10430:1212..4483+ (Sphaerotrichia firma ET2_F female)
GGCGGCGGCAGCGGCGGCGGCGGTGGGCCCGGCGGCGAGGGCAGCGTCAA
CAGCAACCAGCCGCAGCCCTCTGCCCACGTGATCCACGCCATGAGGGGGT
TCTTCCGTTCGATCGCCCTGGGCCAGAACCAGTCCATGGCGAATGTGCTC
CAGGTCTGGGTCTGGGTGTCTTGTCTTTCTGGTTTTGCGGTCGCGGTTGC
GTTTGCTCTTTTTTTTTTCGCTGTCGCGTTTCGCTTTTGCCATCGCTTTC
TATTGAGTTTCGCGGTTTTGCTTTGCTTCTTTCCGTCTCTTCTTCGATAC
TGTATGGGTGTTTTTTTTTCGGGCGTGGCGGTGGTGGTACTTTGAGGGGT
GTCGACTGATCCTTCCGTCCTCCTCTTGCTGCCTCGTGCGCTGTCGGTGG
GTGTGACATCGCGTCGTGATGATGTCGTGTGTGTGTGTGATGTGGTGGCA
GGACACTCTGCGGCTGCTGACGCTTTGGTTCGCCCACGGCGGCTTCGAGT
CGGTGAGTGAGACGTGTCGAAAAACAGACGAAAACAGACGAGAAGAGAAG
AGACGAGACGAGACGAGAACAAGAGAGAAGAGAGCACCACGGGAAAACTT
CCCTGCCACTGCTGCCGCTGCTGTCGCGGCCGTTCGTTTTCCGCGTGTGC
TGCACTCGTACGATGCTTGTATCATCCAGCCCTGTCGGTCGGTGTTTCAT
CGCCGCCTACATACGGCCGCGCGGAGAGCGTACTCGTCACGTTCCGACTG
GTGCAAGCCTCAGCGGCCTTTTAACGCGAATAACCACAGCCACAGCAACA
GCAAACAGTAGTGACGCCTACGCTCTGCCGTTCGCGCTCGCACGACAGGT
GAACCGCGAGATGTCCTTGGGCATGCAGACCTGCGGCGTGGACACGTGGC
TCGGGGTGGTCCCCCAGCTGATCGCGAGGGTCCACGCTGCGTCCCCCCGC
GTCACCAAGCTTCTCCGACAACTCCTGGTTAGGATCGGCCGCAAGCATCC
CCAGGTACGCATCTGGACGTACTTTTATGTATCCTGGCTATTTCGATGGA
CTAGGGGGCTTTGTCGTCGTTTTCCCCCACCGACGAAACATGCGTTAGGG
TTTGTGTTTGCTTGCTTCCGGCGCGTTTTCCGGCGGGATGCCATTTGTGG
TGTGCACGGTCTGCTGTGTGTTCGTTTTTTGCTGTTGTGCGGCTTTTCGG
TGGCTGTGTTTCTCACATGTTTCTCGATCGATCAAGAGAGGGAGGGGTTG
GTGGGCTCTGAAAAAAGAAAGAGTTTGTCGTTGCCTGGTTGCCTCGAAGA
AAAAAGCGACAAGGAACGTCCGTGTCCGTCGGAAAAAGAAACCCCGCGGC
CGGCGGCGATATGCCTCGGCTCCCGATTCCTTCACAATCCTTGTCCCGAG
TTTTTTTCCCCTCCGTCTCGTTGTTTTTCTGGATTCATCAGTCCGCGCAG
ACCGTGTGTCGCCGGATTCTAGGTACGTTTGGCTGACTGTGCGGCTTAAT
CACCCGGCTGAATGAATTGAAATGATTATTGGTGCACGCAGGCTTTGATC
TACCCCATCACGGTGGCCAGCAAGAATTCCTCGCGTCCGCGGCAGGAGGT
GAGTCAGCACGTTGTTGTTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTTG
TCGGAACGCTTTCTGTTGCCCAAGGCAAACCATCCAATACAAGCAGCAAA
GTTGACCCGGGACAGATCGGCAAACAGCGGCGCTGTTCTCCCGTGATACG
TACTTTCTTTATTTCATGCATTGCTGCTGGTACTCGCGACTAAAAATTAG
GCGGCGGGCGCGGTGATGGCGGACATGCGGCTGCAGTACCCTGTGCTGGT
AGAGGAGGCCTCCCTCGTCTCACGAGCGATGATCAAGGTGAGCTTGCTCG
ACACGCAGAGGTAGGTGTACATCCGCGGCAGCACAACAATCTCCAAGCGT
CCTCTACTGCACAAAACGCCCGTCCTTTTGAAGGTTGTGGGGGTGCCGAT
TTCTTTGCTTGTTTTCACGCAGTCCCGCGGGAAACAGGGGTTGTTCTTGT
TTTCACACCACGGAGCCCCCCTGATCCCGGCCTTTTTGCAGGTGTAGGCT
TGATTGCCCCTCGAGAGCATTGGGGGGGGGGGGGGCGGAAGGAGGACCGA
AAACTAAGCACTGCTGTTGTTGCGATTTTCCAACTTGGACGCGACAAAGG
ATGCCGTGACGTTGCCGGAGGTGTAACGCGCAACGTTGTGCTTTCCCCGG
TTCCGTCGAAAGTGTGTTGTTTTAGCTTGTTCCTTCCATCGCTTCCACCA
CCTCCGTGACAACGAGACGATGTGTCGAATGTATCATGTGTATGTGTCGG
ATGACATTCTCCTGAGTACCTATCTCCCTGTCTCCCTTAGGTGGCCATGA
CGTGGCCGGAGGTTTGGCACGAGGGGCTGGAGGAGGCCTCAAGGATGTAC
TTCGGGGACGGCAACGTGGAAGGCATGCTCCAACGTCTCCAGGTATGTTG
GAGTACAGCACACGGACCAGCACGTACGGGATGTCTCACCGCATGACGAA
GTATGATGGTATTGCGGGTGCAGCGCACACCCTCTTGGTATACCTACCGT
GCGCATGGTTGATCTCCGCGGCAGCTACGGCCGGCACAGCTTACCGTAGG
TGACAGAGGATGGACACCCCCCCGTGGTAGCAAATTTCAGTGAAAAAAAA
CTTGTCACAGGGTGGGGTATTCTGTGGGGGGTCTGTTCATCTTCTGTCAC
CGTTTTACTTGGTATTACGGCTATAGTTTGACCCCAAAAAGAAAGTGACG
CAGGTGCGTTTTTCTGGGCAGGTTTTGTGTGGGGTGTCGTATTATCTTCT
GTCATACCTACGGTATGTACCGTTTACCTGGACGTGTCGTGCCCCATGCA
CGCACGGCATAGGATACGTATCATACGTTGGATGTAGGTAGTCTAGGATC
GCTCTGCCTGGCCTACCGCGTGTGGTTGCGTCAATGCTGCTGCCGTCCAC
CAAAATACTTCGTAGGAATTAGTACTCTACCACAAACCCGCCGCTGAAAT
TTCTCCCCCCCCCCCCCACGCCGCCCGAAACATCAAACCCATCCCATCTA
ATCCGCCTTGCGCTGCAGGTGCTACACAACCTTCTGCCCTGGGACACACC
GTCCGCCTCGAGCGCGCACCAGTCCGACGCCGCTCGAAAACGAGGGCCGT
CCGGAGACGGCGGCGACTCCTCCTCCTCCTGCTCCTCCGAAGCAGGCGGC
GGCGGCGGCGGCGGCGGCGGCG
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Coding sequence (CDS) from alignment at S-firma_F_contig10430:1212..4483+

>mRNA_S-firma_F_contig10430.617.1 ID=mRNA_S-firma_F_contig10430.617.1|Name=mRNA_S-firma_F_contig10430.617.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1518bp|location=Sequence derived from alignment at S-firma_F_contig10430:1212..4483+ (Sphaerotrichia firma ET2_F female)
GGCGGCGGCAGCGGCGGCGGCGGTGGGCCCGGCGGCGAGGGCAGCGTCAA
CAGCAACCAGCCGCAGCCCTCTGCCCACGTGATCCACGCCATGAGGGGGT
TCTTCCGTTCGATCGCCCTGGGCCAGAACCAGTCCATGGCGAATGTGCTC
CAGGGCGGCGGCAGCGGCGGCGGCGGTGGGCCCGGCGGCGAGGGCAGCGT
CAACAGCAACCAGCCGCAGCCCTCTGCCCACGTGATCCACGCCATGAGGG
GGTTCTTCCGTTCGATCGCCCTGGGCCAGAACCAGTCCATGGCGAATGTG
CTCCAGGACACTCTGCGGCTGCTGACGCTTTGGTTCGCCCACGGCGGCTT
CGAGTCGGACACTCTGCGGCTGCTGACGCTTTGGTTCGCCCACGGCGGCT
TCGAGTCGGTGAACCGCGAGATGTCCTTGGGCATGCAGACCTGCGGCGTG
GACACGTGGCTCGGGGTGGTCCCCCAGCTGATCGCGAGGGTCCACGCTGC
GTCCCCCCGCGTCACCAAGCTTCTCCGACAACTCCTGGTTAGGATCGGCC
GCAAGCATCCCCAGGTGAACCGCGAGATGTCCTTGGGCATGCAGACCTGC
GGCGTGGACACGTGGCTCGGGGTGGTCCCCCAGCTGATCGCGAGGGTCCA
CGCTGCGTCCCCCCGCGTCACCAAGCTTCTCCGACAACTCCTGGTTAGGA
TCGGCCGCAAGCATCCCCAGGCTTTGATCTACCCCATCACGGTGGCCAGC
AAGAATTCCTCGCGTCCGCGGCAGGAGGCTTTGATCTACCCCATCACGGT
GGCCAGCAAGAATTCCTCGCGTCCGCGGCAGGAGGCGGCGGGCGCGGTGA
TGGCGGACATGCGGCTGCAGTACCCTGTGCTGGTAGAGGAGGCCTCCCTC
GTCTCACGAGCGATGATCAAGGCGGCGGGCGCGGTGATGGCGGACATGCG
GCTGCAGTACCCTGTGCTGGTAGAGGAGGCCTCCCTCGTCTCACGAGCGA
TGATCAAGGTGGCCATGACGTGGCCGGAGGTTTGGCACGAGGGGCTGGAG
GAGGCCTCAAGGATGTACTTCGGGGACGGCAACGTGGAAGGCATGCTCCA
ACGTCTCCAGGTGGCCATGACGTGGCCGGAGGTTTGGCACGAGGGGCTGG
AGGAGGCCTCAAGGATGTACTTCGGGGACGGCAACGTGGAAGGCATGCTC
CAACGTCTCCAGGTGCTACACAACCTTCTGCCCTGGGACACACCGTCCGC
CTCGAGCGCGCACCAGTCCGACGCCGCTCGAAAACGAGGGCCGTCCGGAG
ACGGCGGCGACTCCTCCTCCTCCTGCTCCTCCGAAGCAGGCGGCGGCGGC
GGCGGCGGCGGCGGCGTGCTACACAACCTTCTGCCCTGGGACACACCGTC
CGCCTCGAGCGCGCACCAGTCCGACGCCGCTCGAAAACGAGGGCCGTCCG
GAGACGGCGGCGACTCCTCCTCCTCCTGCTCCTCCGAAGCAGGCGGCGGC
GGCGGCGGCGGCGGCGGC
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