mRNA_S-firma_F_contig10397.569.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A1V9ZN73_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN73_9STRA) HSP 1 Score: 157 bits (396), Expect = 8.740e-42 Identity = 122/329 (37.08%), Postives = 171/329 (51.98%), Query Frame = 1
Query: 43 VNIGNFKGVMLCNRPLAGAAAGAAAAPKADMDKKPFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATDLSTNQKKKLAASNKPAWAMTEGAAEAAA----ETEADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXX-KEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLSTMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
VNIGN+KGVMLCNRP A K PF G++ V G + + +A R K TALSKHK WL DLQ++R+ L+E + D+ EK+ RR F++ + E+R IR D + K LA +PAWA+T+ AE E + DQLLDF +LD + F+DD+E++A + E++++L +EE +E LS A L R D++ R DD S+A TV+S +I VHS +S+ A+ R + KLS+ L P+P P +V D+ R K L SNLPY HRNP+V
Sbjct: 6 VNIGNYKGVMLCNRPFNSVGAVQKEVAHDSSKKAPFLGGVQPVPV---GTNVPIFNEPPHAVKRDKKNTALSKHKKWLHDLQKERDRLEEALSEDQAEKDARRERFSKREAELRAQIRQRPQD------DDKAVLA---RPAWALTKDKAECKQDQQEEEDVDQLLDFANNLDIDNFMDDVELKAQVAQVDEQMAQLQKLVSQEEADEKKGEIREVLAQESLERQFLSAAMLARLDAKG--RDEDEDDAKSVASTVLSECKSIRSVHSTRSVLALTKRAEHKLSS------LDPIPEPHVVRHDEEAGTRLQNKHLTSNLPYMHRNPAV 314
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A6G0XC25_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XC25_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.120e-41 Identity = 125/338 (36.98%), Postives = 184/338 (54.44%), Query Frame = 1
Query: 28 GMDTGVNIGNFKGVMLCNRPLAGAAAGAAAAPKADMDKK-PFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVL--DDATDLSTNQKKKLAASNKPAWAMTEGAAEAAAETE----ADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXX-KEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKL-STMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
G++ VNIGN+KGVMLCNRP G + +AD +K PF GI+S +P G + + ++A R K TALSKHK WL DLQ++R+ L+E +L DE EK+ RR F + + + R +R DD++D KK L +P WA+T+ A+ E E D LLDF +LD + F+DD+E++A + E++S+L +EE KE + TL+ A+L R D R DD S+A TV+S +I VHS +S+ A+ R + +L + + A+ E +P P ++ D+ R K L SNLPY HRNP++
Sbjct: 3 GVNANVNIGNYKGVMLCNRPFNGVTP--VSVKEADPSRKAPFLTGIQS---SPVGQNVPIFNEPLHAVKRDKKNTALSKHKKWLHDLQKERDRLEEALLEDEDEKQRRRERFTKREADFRAKVRSTNPEDDSSD-----KKAL---RRPMWALTKETADEKKEREEEEDVDNLLDFANNLDIDSFMDDVEIKAQVAHMDEQLSKLQEMVNQEEAEEKKAEIKEMLKAESHDRQTLNAAALFRLDGADAKRD-VDDDAASVASTVLSECKSIRSVHSTRSVLALTRRAEDRLMNRLEAVPE--GIPEPHVITHDEECGMRLQNKHLPSNLPYIHRNPAI 324
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: H3GFS9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFS9_PHYRM) HSP 1 Score: 154 bits (390), Expect = 1.680e-40 Identity = 121/352 (34.38%), Postives = 187/352 (53.12%), Query Frame = 1
Query: 25 TGMDTG-VNIGNFKGVMLCNRPLAGAAAGAAAAPK---------ADMDKKPFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATDLSTNQ----KKKLAASNKPAWAMTEGAAE----AAAETEADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXXKEGG--EDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLSTM-PAIAELPPVP-APKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
TG+ T V+IGN+KGVMLCNRP G ++ A + D K F AG E P G + ++ + R K TALSKHK WL DLQ++R L++++ DE + RR F++ + ++R+A+R DD DL + +KK + N+P WA+T+ A+ + + EA+ L++F +LD ++F+DD+E++A + ++++++ S EE +E E+ G L+ L R DD MS+A +V+S +I VHS +S+ A+ R +AKL T PA +E P AP+IV D+ R K L SNLPY HRNP++
Sbjct: 5 TGVSTSAVSIGNYKGVMLCNRPFNGVSSTLAKENRYGAKTNNNVVDNSKAAFLAGNPGE---PLGLNVPILSEPAHGIRRDKKNTALSKHKKWLHDLQKERSRLQDELAEDEEAAQMRRERFSQREAKMREAVRSNNDDEDDLDADVGPAVEKKKKSLNRPMWALTKATADEKLDSLEDAEANDLIEFANNLDIDQFMDDVEIKARVAQVEQQLAQVQSIVDYEEAEEKRCEREQQRLEELANGGGALNGNDLSRLGWDRADAKGGDDDAMSVASSVLSECKSIRSVHSVRSVAAITKRVEAKLLTDGPARSEADSTPPAPRIVTIDEEQGIRMQIKTLPSNLPYIHRNPAI 353
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A485KS36_9STRA (Aste57867_10908 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS36_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.070e-40 Identity = 123/338 (36.39%), Postives = 179/338 (52.96%), Query Frame = 1
Query: 28 GMDTGVNIGNFKGVMLCNRPLAGAAAGAAAAPKADMDKKP-FKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVL-DDATDLSTNQKKKLAASNKPAWAMTEGAAEAAAETE----ADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXX-KEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKT--DDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLSTMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
G + VNIGN+KGVMLCNRP G A + + D KK F GI++ P G + + ++A R K TALSKHK WL DLQ++R+ L+ +L DE EKE RR F++ + + R +R +D D + ++K L +P WA+T+ A+ + E D LLDF +LD + F+DD+E++A + E++S+L +EE KE + TL+ A+L R D GV ++ DD S+A TV+S +I VHS +S+ A+ R + KL VP P +V D+ R K L SNLPY HRNP++
Sbjct: 6 GNNPNVNIGNYKGVMLCNRPFNGVTP-ATFSKEVDSSKKAAFLTGIQAA---PIGQNVPIFNEPLHAIKRDKKNTALSKHKKWLHDLQKERDRLEGALLEDEDEKERRRERFSKREADFRAQVRRTNPEDGDDAAADKKPSL---RRPMWALTKETADEKKQREEEENVDDLLDFANNLDLDSFMDDVEIKAQVAHVNEQLSQLQEIVNQEEANEKKAEIKEILKAESHERQTLNAAALSRLD---GVDAKRDVDDDAASVASTVLSECKSIRSVHSTRSVLALTRRAEDKLHRQLDCVPEGGVPDPHVVTHDEEMGMRLQNKHLPSNLPYIHRNPAI 333
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A1V9ZJS8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJS8_9STRA) HSP 1 Score: 159 bits (403), Expect = 9.580e-40 Identity = 119/330 (36.06%), Postives = 177/330 (53.64%), Query Frame = 1
Query: 43 VNIGNFKGVMLCNRPLAGAAAGAAAAPKADMDKK-PFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATDLSTNQKKKLAASNKPAWAMTEGAAEAAAETEADQ----LLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXX-KEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLSTMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
VNIGN+KGVMLCNRP + + + D KK PF GI+ V G + + +A R K TALSKHK WL DLQ++RE L+E ++ DE KEER+ F++ + E+R+ +R + D A +PAWA+T+ A+ + E D+ LL+F +LD + F+DD+E++A + E++++L +EE KE ++ L+ A+L R D++ DD S+A TV+S +I VHS +S+ A+ R + KL+T L +P P +V D+ G R K L SNLPY HRNP+V
Sbjct: 1162 VNIGNYKGVMLCNRPFNSVST---VSKEVDSAKKAPFLGGIQPSHV---GQNVPIFNESPHAVKRDKKNTALSKHKKWLYDLQKERERLEEVLMEDEASKEERKERFSKREAEMRNKVRQRMPQDDD-------DKAIRGRPAWALTKDKADCKRDQEEDEDVDHLLEFANNLDIDAFMDDVELKAQVAHVDEQMAQLQKLVNQEEADEKKQEVKELLQNESLERQVLNAANLSRLDTKGN--DSDDDDAKSVASTVLSECKSIRSVHSSRSVLALTRRAEQKLTT-----HLESIPEPNVVTHDEEGGMRLQNKHLTSNLPYMHRNPAV 1471
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A024UN36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN36_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.680e-39 Identity = 124/346 (35.84%), Postives = 187/346 (54.05%), Query Frame = 1
Query: 28 GMDTGVNIGNFKGVMLCNRPLAGAAAGAAAAPK-ADMDKK--PFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVL--DDATDLSTNQKKKLAASNKPAWAMTEGAAEAAA----ETEADQLLDFVASLDFEEFVDDIEVRAALQAARERIS---ELTSREGKEEXXXXXXXKEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKL-----STMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
G + VNIGN+KGVMLCNRP G +G K D K PF GI+ P G + + ++A R K TALSKHK WL DLQ++R+ L+E +++DE EK++RR F++ + E R +R +DA D+ S +P WA+T+ A+ E + D+LLDF +LD + F+DD+E++A + E+++ E+ ++E EE E A ++ L+ A+L R D+ + DD +S+A TV+S +I VHS +S+ A+ R + KL +T+P A VP+P +V D+ R K L SNLPY HRNP++
Sbjct: 128 GANPNVNIGNYKGVMLCNRPFNGVVSGPPTTLKDTDHSSKHAPFLTGIQPP---PIGQNVPIFNEPLHAIKRDKKNTALSKHKKWLHDLQKERDRLEEALMVDEEEKQKRRDRFSKREAEFRAQVRRTNPEEDAADVK--------GSKRPMWALTKETADEKRVRDEEEDVDRLLDFANNLDLDSFMDDVELKAHVAQVNEQLAKLQEVVNQEEGEERKAEVKEMLQAERAERQM--LNAAALSRLDTAD-AKGYVDDDAVSVASTVLSECKSIRSVHSTRSVMALARRAEDKLLNGRLTTVPEGAS-GAVPSPHVVTHDEECGMRLQNKHLPSNLPYIHRNPAI 458
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: G4Z230_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z230_PHYSP) HSP 1 Score: 149 bits (376), Expect = 1.860e-38 Identity = 122/349 (34.96%), Postives = 182/349 (52.15%), Query Frame = 1
Query: 43 VNIGNFKGVMLCNRPLAGAAAGAAAAPK-----------ADMDKKPFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATD------LSTNQKKKLAASNKPAWAMTEGAAEAAAE----TEADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXXKEGG--EDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLSTM-PAIAEL-PPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
V+IGN+KGVMLCNRP G ++ A A D K F AG E P G + ++ +A R K TALSKHK WL DLQ++R L+E + DE ++RR F++ + ++R+A R +D D L+ +K K ++P WA+T+ AE E EA+ L++F +LD ++F+DD+E++A + ++++++ S EE +E E+ G L+ L R K DD MS+A +V+S +I VHS +S+ A+ R +AKL T PA +E P P+IV D+ AR K L SNLPY HRNP++
Sbjct: 12 VSIGNYKGVMLCNRPFNGVSSTALAKENRYSGIKSNNNAVDNSKAAFLAGNPGE---PLGLNVPILSEPAHAIRRDKKNTALSKHKKWLHDLQKERARLQEALAEDEEAAQKRRERFSQREAKLREAARSSNNDGEDGADGAGLAVEKKSKNL--HRPMWALTKATAEEKLECLEDAEANDLIEFANNLDIDQFMDDVEIKARVAQVEQQLAQVQSIVDYEEAEEKRCEREQQRLEELANGGGALNGNDLSRLGWDRA--DAKDDDAMSVASSVLSECKSIRSVHSVRSVAAITKRVEAKLLTDGPAPSEAGSAAPIPRIVTIDEEDGARMQIKTLPSNLPYIHRNPAI 353
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A8K1FBL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBL3_PYTOL) HSP 1 Score: 146 bits (369), Expect = 1.490e-37 Identity = 116/340 (34.12%), Postives = 176/340 (51.76%), Query Frame = 1
Query: 43 VNIGNFKGVMLCNRPLAGAAAGAAAAPK-------ADMDKKPFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATDLSTNQKKKLAASNKPAWAMTEGAA----EAAAETEADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXXKEGGEDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKL-----STMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
V+IGN+KGVMLCNRP G ++ + K F AG + V G + + +A R K TALSKHK WL DLQ++R L+E +L DE K+ER F++ + ++R+A+R D +D + KK +A +P WA+T+ A E+ + EAD L++F +LD + F+DD+E++A + +++++L S EE +E +V L+ L R + G DD ++ TV+S +I VHS +S+ A+ R +AKL S+ P P P+IV D+ AR K L SNLPY HRNP++
Sbjct: 15 VSIGNYKGVMLCNRPFNGVSSTLTKETRNLSNNNGGSSFKAAFLAGTPGDPV---GMNVPIHTEPPHAVKRDKKNTALSKHKKWLHDLQKERARLQEALLEDEENKQERHDRFSQREAKMREAVRNNPADPSDGAVADKKS-SAFKRPMWALTKETADEKLESMEDAEADDLINFANNLDLDAFMDDVEIKARVAQVEQQMAQLQSIVDSEEAEEKRAEREFARLGDDKVVPLNANDLARLNRLQGEND-DDDDTRTIVSTVLSECKSIRSVHSMRSVAALTKRAEAKLIDGAGSSTP--------PNPRIVTIDEEQGARMLIKTLPSNLPYIHRNPAI 341
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A6A5A7A4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A7A4_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.870e-37 Identity = 126/346 (36.42%), Postives = 180/346 (52.02%), Query Frame = 1
Query: 28 GMDTGVNIGNFKGVMLCNRPLAGAAAGAAAAPK-ADMDKK--PFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDDATDLSTNQKKKLAASNKPAWAMT-EGAAEAAAETE---ADQLLDFVASLDFEEFVDDIEVRAALQAARERISEL---TSREGKEEXXXXXXXKEGGEDAPTRVGTLSEASLKRHDSRH--GVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQ-----AKLSTMPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
G + VNIGN+KGVMLCNRP G A+G A A K D K PF GI + G + + ++A R K TALSKHK WL DLQ++R+ L+E ++ DE EK+ RR F++ + + R +R + ++ P WA+T E A E A E D LL+F +LD + F+DD+E++A + E++S+L ++E EE E A + TL+ A+L R D GV DD S+A TV+S +I VHS +S+ A+ R + AKL+++P VP P +V D+ R K L SNLPY HRNP++
Sbjct: 5 GGNPNVNIGNYKGVMLCNRPFNGVASGPATAFKDTDYSSKNAPFLTGIHPPTI---GQNVPIFNEPLHAIKRDKKNTALSKHKKWLHDLQKERDRLEEALMEDEDEKQLRRDRFSKREADFRAQVRRTNPEEDGADPKGARR------PMWALTKETADEKKARDEDEDVDDLLEFANNLDLDSFMDDVELKAHVAQVNEQLSKLQAVVNQEEGEEKKSEIKDMLNAERAERQ--TLNAAALSRLDGADSKGV---IDDDAASVASTVLSECKSIRSVHSTRSVMALTRRAEDKLLSAKLASVPEGGRSGIVPTPHVVTHDEECGMRLQNKLLPSNLPYIHRNPAI 336
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Match: A0A3F2RSJ9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSJ9_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.540e-36 Identity = 117/351 (33.33%), Postives = 178/351 (50.71%), Query Frame = 1
Query: 43 VNIGNFKGVMLCNRPLAGAAAGAAAAPKA---------DMDKKPFKAGIKSERVNPRGYDPDVIERKINAPGRAKPVTALSKHKAWLKDLQRQREELKEQMLLDELEKEERRRAFAESQKEIRDAIRGVLDD------ATDLSTNQKKKLAASNKPAWAMTEGAAEAAAET----EADQLLDFVASLDFEEFVDDIEVRAALQAARERISELTSREGKEEXXXXXXXKEGG--EDAPTRVGTLSEASLKRHDSRHGVRPRKTDDNMSLADTVMSNASTISHVHSKKSLQAVIDRTQAKLST------MPAIAELPPVPAPKIVVSDDAGAARAAKKDLVSNLPYQHRNPSV 1014
V+IGN+KGVMLCNRP G ++ A ++ D K F AG E P G + + + R K TA+SKHK WL DLQ++R L+E + DE + RR F++ + ++R+ +RG DD A ++KK L N+P WA+T+ AE ET EA+ L+DF +LD ++F+DD+E++A + ++++++ S E+ +E E+ G L+ L R DD MS+A +V+S +I VHS +S+ A+ R +AKL T P+ A AP++V D+ R K SNLPY HRNP++
Sbjct: 12 VSIGNYKGVMLCNRPFNGVSSSLAKENRSGTKSNNNVVDNSKAAFLAGNPGE---PLGLNVPIFSESGRSIRRDKKNTAMSKHKKWLHDLQKERSRLQEALAEDEEAAQRRRERFSQREAKMRETVRGNNDDDSKDYDAEARPADRKKNL---NRPMWALTKATAEEKLETLEDYEANDLIDFANNLDIDQFMDDVELKARVAQVEQQMAQVQSIVNYEDAEEKRYEREQQRFEEIANGGGALNGDDLARLGWDRAGAKEYDDDAMSVASSVLSECKSIRSVHSVRSVAAMTKRVEAKLLTNGLGTSTPSEAGCSTPLAPRVVTIDEEQGIRMQIKTNPSNLPYIHRNPAI 356 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10397.569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10397.569.1 >prot_S-firma_F_contig10397.569.1 ID=prot_S-firma_F_contig10397.569.1|Name=mRNA_S-firma_F_contig10397.569.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=337bp MLSQRPTGMDTGVNIGNFKGVMLCNRPLAGAAAGAAAAPKADMDKKPFKAback to top mRNA from alignment at S-firma_F_contig10397:2840..4209+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10397.569.1 ID=mRNA_S-firma_F_contig10397.569.1|Name=mRNA_S-firma_F_contig10397.569.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1370bp|location=Sequence derived from alignment at S-firma_F_contig10397:2840..4209+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10397:2840..4209+ >mRNA_S-firma_F_contig10397.569.1 ID=mRNA_S-firma_F_contig10397.569.1|Name=mRNA_S-firma_F_contig10397.569.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2022bp|location=Sequence derived from alignment at S-firma_F_contig10397:2840..4209+ (Sphaerotrichia firma ET2_F female)back to top |