mRNA_S-firma_F_contig1039.558.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1039.558.1
Unique NamemRNA_S-firma_F_contig1039.558.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: D7FV52_ECTSI (C2H2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV52_ECTSI)

HSP 1 Score: 1067 bits (2759), Expect = 0.000e+0
Identity = 580/746 (77.75%), Postives = 639/746 (85.66%), Query Frame = 1
Query:  808 NNGPMMQPMGGNMXXXXXXXMPGAPMFPPQAAA--QMVFTTTQRPQPKMGGQQTRTYNILPMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQED-DIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTEFRRADSANGIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGRTEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPGAMAMGGA-GAMPQGPPPMGAPGFPMMGGGMPMGPXXXXXX---AQMGGMGDFPMQMPIPPDAMMGSAGRGFRGRXXXXXXXXXIVGGRFGGRG-----SRPEPTGPRDPRSLVSYVDVDAPKETTPDLDYGDAFPSKSKKKRKTM 3009
            NNGPMMQPMGG  XXXXXXX+PGAP+FPPQ     QMVFTTTQRPQPK+ G  TRTYNILPMISFKAFMAEQRDDVTPEECKQRYDEYKADY+QRLTHSFIDVH KEEWFLERYHPK  ES RY KLKW+D+ES VFG+QLRANPR F+ASASLDPISEE+RWGG+D RKK PR SSREDASVDAMEED ++PGE  P+++++D D DYDVDAKD  AH++KVAFIRRIPAWVST ELG QI  EAP+HERIVCSDAANTRN+D+ RSAYI+YDTPEKA KAVQ+LNKMRIYQ  +PK+KI KK SGDG+YFEL+VFSYQPRS  SV H+FS A R+ HD+  SLKVA+ALD EFRRA+S +GI ALLAEPEVQAALASS +G AQLDLVCAY+KRVYFY+YYRGQ+CRDEGDMIA+RG GRG+PAASKEEIQ  +S A+++EG NGNGVAE    STDK ET + ++ G   S TE VD  SA  IKQAENAEE R+KDQAFVERYD RV+ EV+KWQA +TGRT+EGYARC M  C KLFKAPEFVHKHLVNKHPEKYK V+D+V++PFVRE+ MADDNKPLPNIVADANTPPVVLLPGAMAMGG  G MPQGPPPMGAPGFPMMGGGMPMG           QMGGMGDFPMQMP+PPDAMMGSAGRGFRGRXXXXXXXXX     FGGRG     S PEPTGPRDPRSLVSYVDVDAPKETTP+LDYGDAFPSKSKKKRKTM
Sbjct:  102 NNGPMMQPMGGXXXXXXXXXVPGAPIFPPQGGGHGQMVFTTTQRPQPKLPGPHTRTYNILPMISFKAFMAEQRDDVTPEECKQRYDEYKADYVQRLTHSFIDVHCKEEWFLERYHPKRAESTRYAKLKWVDKESAVFGEQLRANPRLFVASASLDPISEEQRWGGMDKRKKRPRNSSREDASVDAMEEDLDQPGETTPQDDKDDGDADYDVDAKDISAHSDKVAFIRRIPAWVSTDELGRQIVEEAPQHERIVCSDAANTRNDDFARSAYIVYDTPEKATKAVQQLNKMRIYQNSRPKTKIAKKQSGDGRYFELKVFSYQPRSQNSVDHDFSTANRVAHDSKQSLKVAKALDEEFRRAESTDGITALLAEPEVQAALASSSSGAAQLDLVCAYMKRVYFYVYYRGQECRDEGDMIASRGAGRGVPAASKEEIQEAMSKADAVEGTNGNGVAEASVGSTDKGETGQTSRRG---SGTEFVDARSADRIKQAENAEETRKKDQAFVERYDERVKAEVTKWQAMNTGRTDEGYARCLMPNCGKLFKAPEFVHKHLVNKHPEKYKLVLDQVADPFVRELLMADDNKPLPNIVADANTPPVVLLPGAMAMGGTLGGMPQGPPPMGAPGFPMMGGGMPMGMGGMMGPMVPGQMGGMGDFPMQMPMPPDAMMGSAGRGFRGRXXXXXXXXXXXXXXFGGRGMGRVDSMPEPTGPRDPRSLVSYVDVDAPKETTPNLDYGDAFPSKSKKKRKTM 844          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A6H5KYR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR2_9PHAE)

HSP 1 Score: 899 bits (2324), Expect = 2.080e-313
Identity = 496/672 (73.81%), Postives = 555/672 (82.59%), Query Frame = 1
Query:  799 GPPNNGPMMQPMGGNMXXXXXXXMPGAPMFPPQAAA--QMVFTTTQRPQPKMGGQQTRTYNILPMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQED-DIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTEFRRADSANGIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAV-----ISNAESMEGVNGNGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGRTEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPGAMAMGGA-GAMPQGPPPMGAPGFPMMGGGMPMGPXXXXXX---AQMGGMGDFPMQMPIPPDAM 2778
            GP NNGPMMQPMGGN+XXXXXXX+PGAPMFPPQ A   QMVFTTTQRPQPK+ G  TRTYNILPMISFKAFMAEQRDDVTPEEC QRYDEYKADY+QRLTHSFIDVH KEEWFLERYHPK  ES R  K KW+++ES VFG+QLRANPR FIASASLDPISEE+RWGG+D RKK PR SSREDASVDAMEED ++PGE  P+++++D D DYDVDAK+  AH++KVAFIRRIPAWVST ELG QI  EAP+HERIVCSDAANTRN+D+ RSAYIIYDTPEKA KAVQ+LNKMRIYQ  KPK+KI KK SGDG+YFEL+VFSYQPRS  SV H+FS A RI HDT  SLKVA+ALD EFRRA+S +GI ALLAEPEVQAAL SS +G AQLDLVCAY+KRVYFY+YYRGQQCRDEGDMIA+RG GRG+PAASKEEIQA      +S A+++EG NGNGV E    STDK ET + ++ G   S T+ VD  SA  IKQA+NAEE R+KDQAFVERYD RV+            R+   ++  G+M   +LFKAPEFVHKHLVNKHPEKYK V+D+V++PFVRE+ MADDNKPLPNIVADANTPPVVLLPGAMAMGG  GAMPQGPPPMGAPGFPMMGGGMPMG           QMGGMGDFPMQMP+PP A+
Sbjct:   99 GPSNNGPMMQPMGGNLXXXXXXXVPGAPMFPPQGAGHGQMVFTTTQRPQPKLPGPHTRTYNILPMISFKAFMAEQRDDVTPEECNQRYDEYKADYVQRLTHSFIDVHCKEEWFLERYHPKKAESTRNAKQKWVEKESAVFGEQLRANPRLFIASASLDPISEEQRWGGMDKRKKRPRNSSREDASVDAMEEDVDQPGETMPQDDKDDGDADYDVDAKEISAHSDKVAFIRRIPAWVSTDELGRQIIEEAPQHERIVCSDAANTRNDDFARSAYIIYDTPEKATKAVQQLNKMRIYQNSKPKTKIAKKQSGDGRYFELKVFSYQPRSQNSVDHDFSTANRIAHDTKQSLKVAKALDEEFRRAESTDGITALLAEPEVQAALTSSSSGAAQLDLVCAYMKRVYFYVYYRGQQCRDEGDMIASRGAGRGVPAASKEEIQAASQAKAMSKADAVEGTNGNGVVEASVGSTDKGETGQTSRRG---SGTDSVDARSADRIKQAKNAEETRKKDQAFVERYDERVK----------AVRSIPAFS-VGLMHS-ELFKAPEFVHKHLVNKHPEKYKLVLDQVADPFVRELLMADDNKPLPNIVADANTPPVVLLPGAMAMGGTLGAMPQGPPPMGAPGFPMMGGGMPMGMGGMMGPMVPGQMGGMGDFPMQMPMPPGAV 755          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A0P1AZ84_PLAHL (Serrate rna effector molecule n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZ84_PLAHL)

HSP 1 Score: 166 bits (420), Expect = 2.650e-38
Identity = 152/550 (27.64%), Postives = 244/550 (44.36%), Query Frame = 1
Query:  976 ILPMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTEFRRADSAN----GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNG-NGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENAE--EKRQKDQAFVERYDARVQEEVSKWQAQHTGR-TEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPG 2601
            + P+IS+K +M +Q D++TPE  +QRY+EYK  ++QR+  +F D+H++EEW  ERY P      R  K+K   Q +    K  +      +A+   D ++  E                                             D+  D +D      ++ +IRR+P       L   I      +  +  SD       D+ RSAYI+YD+P  A++A+ KL+   +    +               F L+V  ++ R+        S   RI  D   +L++A+ALDT     +       GI ALL+  +V   L   P+   QLDLV AYL+RV+ Y+YY G QCRD GD++         P  S  +++   +  E  E +N  NG  EP        +T R   A         +D   +  +K+ E  E   KR K++A V+  + R +  +    A +  + +E+G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D+ +P+P +   ++     +L G
Sbjct:  268 LEPLISYKVWMMQQTDELTPEGYQQRYEEYKKKHIQRVLRAFFDLHKREEWLQERYSPALRA--RVEKIKTTHQMNEA--KHFKERILSGVATICFDEMTANEGMTKA---------------------------------------TDFVNDVEDSA----RILYIRRVPCACPIGTLSEAIKKAGGPYLHLYLSDPVKKSAFDFDRSAYILYDSPTTASEAMPKLHNTFVEDNTQFPP------------FRLQVSPHRARAPLKTPSYLSVPTRIEVDLTQALRLAQALDTRLFELNQEKCDQVGIHALLSLEQV---LVKYPSAKEQLDLVIAYLRRVHHYIYYAGVQCRDMGDILHAHPALFCRPPPSLRDLEEEKTRHEENERLNDENGSQEP-------RQTIRGWAA--------ALDEKVSMYLKELEPEELQAKRVKERALVDEIETREEIALESTYANYGEKASEDGKHRCRL--CTKLFKALDFVKKHIRNKHPELVVDKIAEVGESYMWEQYRQDEQRPMPPLETSSSVSSGAVLGG 738          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A3M6V866_9STRA (C2H2-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V866_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.200e-35
Identity = 157/550 (28.55%), Postives = 244/550 (44.36%), Query Frame = 1
Query:  982 PMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYF---ELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTE-FRRAD---SANGIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQ--------AVISNAESMEGVNGNGVAE--PGASSTDKSETDRPNKAGERESETEV------VDNLSAATIKQA--ENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGR-TEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLP 2553
            P++S+K +M  Q D+ +PE  +QRY+EYK  ++QR+  +F +VH++EEW  ERY P    + RY   K    +     +Q     R   A   LD     +  G          TS  ED + D                               L H+ +V ++RR+P       L   I         +  SD A     D+ RSAYIIY++   A+ A+ K++   +                DG  F    L+V  ++ R+        S  ER+  D   SL +A+ALD   F  A    +  G++ALL   EV  + ++      +LD+V AYL+RV+ Y+YY G QC D GD++         P  S  +I+        AV S A S + V    + E    A++T+  E D    A   E+   +      +D    A +K+   E  E KR K++A V+  +AR +  +    A +  + +++G  RC +  C KLFKA +FV KH+ NKHPE     V +V E ++ E +  D++ P+P
Sbjct:   99 PLVSYKIWMMRQTDESSPEVYQQRYEEYKKKHVQRVLRAFFEVHKREEWMQERYSP----ALRYRVEKHKTTQQISEAQQFHERLRTGTAKICLDEQISIDNGG----------TSMVEDFAND-------------------------------LEHSARVLYVRRVPCACPVGTLSETIKKAGGPFVHLYLSDPAKKSAFDFDRSAYIIYESAAAASDAISKIHNTFVE---------------DGNQFPPFRLQVSPHRARAPLKTPSYLSVPERLAADYKQSLALAKALDARLFHNAKEKLARFGVEALLISEEVAQSYSTDKE---KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAVTSAAISADDVP---IEENKDNAANTETREKDSSVSATTGETAKAIGGWASALDEKVQAYLKELAPEVVEAKRAKNRALVDEVEAREEAALESTYANYGEKASDDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKVAEVGESYMWEQYREDEHHPMP 580          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: M4C0K2_HYAAE (C2H2-type domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0K2_HYAAE)

HSP 1 Score: 155 bits (392), Expect = 3.200e-35
Identity = 151/553 (27.31%), Postives = 242/553 (43.76%), Query Frame = 1
Query:  982 PMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTE-FRRAD---SANGIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSETDRPN-------KAGERESETE---------------VVDNLSAATIKQA--ENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGR-TEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLP 2553
            P++S+K ++  Q D+++PE  +QRY+EYK  ++QR+  +F D H++EEW  ERY P         K+     E+  FG+++R+   +      LD     E  G           +S ED + D                               +  + +V ++RR+P       L   I         +  SD       D+ RSAYIIY++   A+ A+ K++   +              S     F L+V  ++ R+        S  ER+  D   SL +A+ALD   F  A+   +  GI+ALLA  EV   L +  A   +LD+V AYL+RV+ Y+YY G QC D GD++         P+ S  +I    +  E          A  GAS +++      N       +AGER+  +                 +D    A +K+   E  E KR K++A V+  +AR +  +    A +  + +++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D+  P+P
Sbjct:  101 PLVSYKVWIMRQTDELSPEVYQQRYEEYKKKHVQRVLRAFFDQHKREEWLQERYSPALRHRVETQKMMQQMNEAKQFGERVRSGTTKIC----LDEQQAAENSG-----------TSAEDFAND-------------------------------MELSARVLYLRRVPCACPVGTLSETIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESAAAASDAMPKIHNTFVED------------SNQFPPFRLQVSPHRARAPLKTPSYLSVPERLTADYKQSLALAKALDLRLFHGAEDKLARFGIEALLASEEVAPNLLTDKA---KLDVVIAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPSPSARDIDEEKARQE---------AATAGASKSEEDAATEKNXXXATKAEAGERKESSASMTGETAKAIGGWAAALDEKVQAYLKELAPEVVEAKRAKNRALVDEIEAREEAALESTYANYGEKASDDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELAVDKIAEVGESYMWEQYREDEQHPMP 581          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A3R7J2W7_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J2W7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.830e-33
Identity = 155/574 (27.00%), Postives = 254/574 (44.25%), Query Frame = 1
Query:  964 RTYNILP--MISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQ--ESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTEFRRADSAN----GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQ-------AVISNAESMEGVNGNGVAEPGASSTDKSE--TDRPNKAGERE--SETEVVDNLSAATIKQA--ENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGR-TEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPGAMAMGG 2619
            R  + LP  + ++K +M  Q D+ +PE  +QRY+EYK  ++QR+  +F ++H++EEW  ERY P      R  K+K   Q  E+  FG+++R+      A   LD                                   E+P   +  N   +D   D +      ++ +V ++RR+P    TA L   I         +  SD       D+ RSAYIIY++   A+ A+ K++   +              S     F L+V  ++ R+        S  ER+V D   +  +A+ALD        A     GI+ALLA  EV  + ++      +LD+V AYL+RV+ Y+YY G QC D GD++         P  S  +++       A  +N+   E  N     +  A++T+  E  T  P     +        +D      +K+   E  E KR K++A V   +AR +  +    + +  + +++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D+  P+P + A+ + P   +L G    GG
Sbjct:   85 RPTSTLPEALATYKVWMMRQSDEASPEVYQQRYEEYKKKHVQRVLRAFFEIHKREEWLQERYSPALRH--RLEKMKTAQQMNEANHFGERVRSG----TAKICLD-----------------------------------EQPPAEDGANPLGEDFANDQE------NSARVLYVRRVPCACPTATLSETIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESAATASDAMPKIHNTFVED------------SNLFPPFRLQVSPHRARAPLKTPSYLSVPERLVVDYEQASALAKALDARLFHGAEAKLARFGIEALLACEEVTQSYSTDKQ---KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDLEEEKARQEAAAANSVKPEDENVKDENKDDAAATEGEEPVTSAPTAEAAKSIGGWAAALDEKVQTYLKELTPEVVEAKRAKNRALVTEIEAREEAALESTYSNYGEKASDDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLEANNSAPGGAVLGGRGGNGG 594          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: K3WBH7_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBH7_GLOUD)

HSP 1 Score: 136 bits (343), Expect = 2.790e-29
Identity = 124/403 (30.77%), Postives = 184/403 (45.66%), Query Frame = 1
Query: 1420 DYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTP--KPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALD--TEFRRADSAN-GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESM----EGVNGNGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENA--EEKRQKDQAFVERYDARVQEEVSKWQAQHTGRT-EEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVL 2592
            D+D D +D    + ++ +IRRIP       L   I       ++I  SD       D+ RSAYIIYDTPE AA+A+ K++   +       P              F L+V  ++ R+        S  ER++ D   +L++A ALD     + AD    GI+ALL   +V     S      +LD+V AYL+RV+ Y+YY G QC D GD++         P  +  +++   +  ES     E V    +    AS                      +D    A IK+ E +  EEKR+KDQA V+  +AR +  +    A +  +  ++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D N+PLP I    N    VL
Sbjct:  212 DFDNDMED----STRILYIRRIPCACPVTSLSESIKKAGGNFQQIFLSDPVKKSAFDFDRSAYIIYDTPEAAAEALPKIHNTFVQDADIFAP--------------FRLQVSQHRSRAPLKTPSYLSVPERLLFDYAQALQLASALDKCVFVKDADRKRYGIEALLEHDDVAPVYESEKQ---KLDVVVAYLRRVHHYIYYAGVQCIDMGDIMHAHPALFCRPEPTARDLEEEKARQESSVAGDESVESKSIGGWAAS----------------------LDEKVQAYIKELEPSVLEEKREKDQALVDEIEAREEAALESTYANYCEKAGDDGKHRCRL--CTKLFKAADFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDANRPLPPIETTNNLSNPVL 569          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A2D4C276_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C276_PYTIN)

HSP 1 Score: 135 bits (341), Expect = 5.730e-29
Identity = 115/389 (29.56%), Postives = 185/389 (47.56%), Query Frame = 1
Query: 1414 DIDYDVDAKDF---LAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALD-TEFRRADSAN--GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGRT-EEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNI 2559
            D + D++ KD+   L  + ++ ++RRIP       L   I       + I  SD       D+ RSAYIIY+TPE A +A+ K++   +                    F L+V  ++ R+        S +ERI  D   +L +A  LD T + +    N  GI+ALL   ++ AA A+  +   +LD+V AYL+RV+ ++YY G QC D GD++         PAA+ ++I+   +  ES+      G A+     T+   +     A   E     ++ L A      E  +EK  K +A VE  +AR +  +    + +  +  ++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D N+PLP +
Sbjct:  235 DEENDLEGKDYDNDLEDSKRILYVRRIPCACPVTTLSEAIKKAGGNFQEIYLSDPVKKSAFDFDRSAYIIYETPEAAEEALPKIHNTFVQDADLFPP------------FRLQVSQHRSRAPLKTPSSMSLSERISFDLKQALTLATRLDKTLYTKEQDLNACGIEALLEHQDIAAAYATEKS---KLDVVIAYLRRVHHFIYYAGVQCIDMGDIMHAHPALFSRPAATPKDIEDDKARKESI------GAADD---PTEVKASTGGWAAAXDEKVQSYIEELDA------EKVQEKMDKQKALVEEVEAREEAALESTYSNYAEKAGDDGKHRCRL--CTKLFKALDFVKKHIRNKHPELAVDKIAEVGESYMWEQYREDTNRPLPPV 591          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: A0A2D4BMN0_PYTIN (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMN0_PYTIN)

HSP 1 Score: 135 bits (339), Expect = 2.540e-28
Identity = 115/389 (29.56%), Postives = 185/389 (47.56%), Query Frame = 1
Query: 1414 DIDYDVDAKDF---LAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYFELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALD-TEFRRADSAN--GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSETDRPNKAGERESETEVVDNLSAATIKQAENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGRT-EEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNI 2559
            D + D++ KD+   L  + ++ ++RRIP       L   I       + I  SD       D+ RSAYIIY+TPE A +A+ K++   +                    F L+V  ++ R+        S +ERI  D   +L +A  LD T + +    N  GI+ALL   ++ AA A+  +   +LD+V AYL+RV+ ++YY G QC D GD++         PAA+ ++I+   +  ES+      G A+     T+   +     A   E     ++ L A      E  +EK  K +A VE  +AR +  +    + +  +  ++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D N+PLP +
Sbjct:  602 DEENDLEGKDYDNDLEDSKRILYVRRIPCACPVTTLSEAIKKAGGNFQEIYLSDPVKKSAFDFDRSAYIIYETPEAAEEALPKIHNTFVQDADLFPP------------FRLQVSQHRSRAPLKTPSSMSLSERISFDLKQALTLATRLDKTLYTKEQDLNACGIEALLEHQDIAAAYATEKS---KLDVVIAYLRRVHHFIYYAGVQCIDMGDIMHAHPALFSRPAATPKDIEDDKARKESI------GAADD---PTEVKASTGGWAAALDEKVQSYIEELDA------EKVQEKMDKQKALVEEVEAREEAALESTYSNYAEKAGDDGKHRCRL--CTKLFKALDFVKKHIRNKHPELAVDKIAEVGESYMWEQYREDTNRPLPPV 958          
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Match: H3GEF9_PHYRM (C2H2-type domain-containing protein n=25 Tax=Phytophthora TaxID=4783 RepID=H3GEF9_PHYRM)

HSP 1 Score: 129 bits (324), Expect = 7.250e-27
Identity = 142/569 (24.96%), Postives = 234/569 (41.12%), Query Frame = 1
Query:  982 PMISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFLERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEERWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVDAKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRNEDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYF---ELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTE-FRRAD---SANGIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEGDMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSE-------------TDRPNKAGERESETEVVDNLSAATIKQA--ENAEEKRQKDQAFVERYDARVQEEVSKWQAQHTGR-TEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKSVVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPGAMAMGG 2619
            P++S+K +M  Q D+++PE  +QRY+EYK  ++QR+  +F ++H++EEW  ERY P         K      E+  FG+++RA   + I      P+       GV+                              P  E         D  + L ++ +V ++RR+P       L   I         +  SD       D+ RSAYIIY++   A+ A+ K++   +                DG  F    L+V  ++ R+        S  ER+  D   + ++A+ALD   F  A+   +  GI+ALL   EV    ++      +LD+V AYL+RV+ Y+YY G QC D GD++         P  S  +++                                          T  P KA         +D    A +++   E    KR K++A V+  + R +  +    + +  + +++G  RC +  C KLFKA +FV KH+ NKHPE     + +V E ++ E +  D+  P+P +    N P   +L G     G
Sbjct:  104 PLVSYKVWMMRQTDELSPEVYQQRYEEYKKKHVQRVLRAFFELHKREEWLQERYSPALRHRVDKHKTSQQMNEAKQFGERVRAGTAK-ICLDEQPPVE-----NGVN------------------------------PLGE---------DFANDLENSERVLYVRRVPCACPVGTLSETIKKAGGPFVHMYLSDPVKKSAFDFDRSAYIIYESAAAASDAMPKIHNTFVE---------------DGNQFPPFRLQVSPHRARAPLKTPSYLSVPERLTSDYKQATELAKALDARLFHGAEDKLARFGIEALLTSEEVTQNYSTDKQ---KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGEPVKA--IGGWAAALDGRVQAYLEELTPEVVGAKRAKNRALVDEIETREEAALESTYSNYGEKASDDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLETSNNMPGGAVLGGRAGSNG 605          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1039.558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV52_ECTSI0.000e+077.75C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYR2_9PHAE2.080e-31373.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1AZ84_PLAHL2.650e-3827.64Serrate rna effector molecule n=1 Tax=Plasmopara h... [more]
A0A3M6V866_9STRA3.200e-3528.55C2H2-type domain-containing protein n=2 Tax=Perono... [more]
M4C0K2_HYAAE3.200e-3527.31C2H2-type domain-containing protein n=2 Tax=Hyalop... [more]
A0A3R7J2W7_9STRA2.830e-3327.00C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
K3WBH7_GLOUD2.790e-2930.77C2H2-type domain-containing protein n=1 Tax=Globis... [more]
A0A2D4C276_PYTIN5.730e-2929.56C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A2D4BMN0_PYTIN2.540e-2829.56Rab-GAP TBC domain-containing protein n=1 Tax=Pyth... [more]
H3GEF9_PHYRM7.250e-2724.96C2H2-type domain-containing protein n=25 Tax=Phyto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1039contigS-firma_F_contig1039:7709..15791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FV52
Preferred nameSRRT
PFAMsARS2,DUF3546,DUF4187
Max annot lvl2759|Eukaryota
KEGG koko:K15196
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006325,GO:0006342,GO:0006351,GO:0006355,GO:0006366,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0009058,GO:0009059,GO:0009301,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010720,GO:0014070,GO:0016043,GO:0016070,GO:0016071,GO:0016073,GO:0016246,GO:0016441,GO:0016458,GO:0016604,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0022008,GO:0030154,GO:0030422,GO:0031047,GO:0031048,GO:0031050,GO:0031053,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033168,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035194,GO:0035195,GO:0035196,GO:0036404,GO:0040029,GO:0042221,GO:0042742,GO:0042795,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043331,GO:0043900,GO:0043901,GO:0043903,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045069,GO:0045071,GO:0045595,GO:0045597,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046685,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050829,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0051707,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0065007,GO:0070013,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071407,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097150,GO:0097159,GO:0097659,GO:0098542,GO:0098727,GO:0098781,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698,GO:1901699,GO:1902679,GO:1903506,GO:1903507,GO:1903900,GO:1903901,GO:1990477,GO:2000026,GO:2000112,GO:2000113,GO:2001141
Evalue0.0
EggNOG OGsKOG2295@1|root,KOG2295@2759|Eukaryota
Descriptionprimary miRNA processing
COG categoryA
BRITEko00000,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC2H2 zinc-finger protein
Ec32 orthologEc-12_007510.1
Exons18
Model size3445
Cds size2928
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1039.558.1prot_S-firma_F_contig1039.558.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1039 8142..15707 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.2996316-UTR-S-firma_F_contig1039:7708..81411622815571.2996316-UTR-S-firma_F_contig1039:7708..8141Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1039 7709..8141 -
1696949424.4918003-UTR-S-firma_F_contig1039:7708..81411696949424.4918003-UTR-S-firma_F_contig1039:7708..8141Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1039 7709..8141 -
1622815571.5190575-UTR-S-firma_F_contig1039:15707..157911622815571.5190575-UTR-S-firma_F_contig1039:15707..15791Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1039 15708..15791 -
1696949424.7533736-UTR-S-firma_F_contig1039:15707..157911696949424.7533736-UTR-S-firma_F_contig1039:15707..15791Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1039 15708..15791 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.3112156-CDS-S-firma_F_contig1039:8141..82131622815571.3112156-CDS-S-firma_F_contig1039:8141..8213Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 8142..8213 -
1696949424.5046096-CDS-S-firma_F_contig1039:8141..82131696949424.5046096-CDS-S-firma_F_contig1039:8141..8213Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 8142..8213 -
1622815571.3241887-CDS-S-firma_F_contig1039:8567..87371622815571.3241887-CDS-S-firma_F_contig1039:8567..8737Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 8568..8737 -
1696949424.560522-CDS-S-firma_F_contig1039:8567..87371696949424.560522-CDS-S-firma_F_contig1039:8567..8737Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 8568..8737 -
1622815571.336165-CDS-S-firma_F_contig1039:9001..92751622815571.336165-CDS-S-firma_F_contig1039:9001..9275Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9002..9275 -
1696949424.5695653-CDS-S-firma_F_contig1039:9001..92751696949424.5695653-CDS-S-firma_F_contig1039:9001..9275Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9002..9275 -
1622815571.3480275-CDS-S-firma_F_contig1039:9469..95471622815571.3480275-CDS-S-firma_F_contig1039:9469..9547Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9470..9547 -
1696949424.5808926-CDS-S-firma_F_contig1039:9469..95471696949424.5808926-CDS-S-firma_F_contig1039:9469..9547Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9470..9547 -
1622815571.357419-CDS-S-firma_F_contig1039:9843..99241622815571.357419-CDS-S-firma_F_contig1039:9843..9924Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9844..9924 -
1696949424.594003-CDS-S-firma_F_contig1039:9843..99241696949424.594003-CDS-S-firma_F_contig1039:9843..9924Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 9844..9924 -
1622815571.3673382-CDS-S-firma_F_contig1039:10277..105141622815571.3673382-CDS-S-firma_F_contig1039:10277..10514Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 10278..10514 -
1696949424.6038344-CDS-S-firma_F_contig1039:10277..105141696949424.6038344-CDS-S-firma_F_contig1039:10277..10514Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 10278..10514 -
1622815571.3778-CDS-S-firma_F_contig1039:10768..109541622815571.3778-CDS-S-firma_F_contig1039:10768..10954Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 10769..10954 -
1696949424.6189823-CDS-S-firma_F_contig1039:10768..109541696949424.6189823-CDS-S-firma_F_contig1039:10768..10954Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 10769..10954 -
1622815571.3880522-CDS-S-firma_F_contig1039:11405..116261622815571.3880522-CDS-S-firma_F_contig1039:11405..11626Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 11406..11626 -
1696949424.629105-CDS-S-firma_F_contig1039:11405..116261696949424.629105-CDS-S-firma_F_contig1039:11405..11626Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 11406..11626 -
1622815571.3994045-CDS-S-firma_F_contig1039:11868..120401622815571.3994045-CDS-S-firma_F_contig1039:11868..12040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 11869..12040 -
1696949424.637581-CDS-S-firma_F_contig1039:11868..120401696949424.637581-CDS-S-firma_F_contig1039:11868..12040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 11869..12040 -
1622815571.4125586-CDS-S-firma_F_contig1039:12242..123651622815571.4125586-CDS-S-firma_F_contig1039:12242..12365Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12243..12365 -
1696949424.6538148-CDS-S-firma_F_contig1039:12242..123651696949424.6538148-CDS-S-firma_F_contig1039:12242..12365Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12243..12365 -
1622815571.4218829-CDS-S-firma_F_contig1039:12551..126711622815571.4218829-CDS-S-firma_F_contig1039:12551..12671Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12552..12671 -
1696949424.6626828-CDS-S-firma_F_contig1039:12551..126711696949424.6626828-CDS-S-firma_F_contig1039:12551..12671Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12552..12671 -
1622815571.4314482-CDS-S-firma_F_contig1039:12926..130821622815571.4314482-CDS-S-firma_F_contig1039:12926..13082Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12927..13082 -
1696949424.6725292-CDS-S-firma_F_contig1039:12926..130821696949424.6725292-CDS-S-firma_F_contig1039:12926..13082Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 12927..13082 -
1622815571.4420063-CDS-S-firma_F_contig1039:13317..134401622815571.4420063-CDS-S-firma_F_contig1039:13317..13440Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 13318..13440 -
1696949424.685741-CDS-S-firma_F_contig1039:13317..134401696949424.685741-CDS-S-firma_F_contig1039:13317..13440Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 13318..13440 -
1622815571.4530826-CDS-S-firma_F_contig1039:13647..138471622815571.4530826-CDS-S-firma_F_contig1039:13647..13847Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 13648..13847 -
1696949424.697721-CDS-S-firma_F_contig1039:13647..138471696949424.697721-CDS-S-firma_F_contig1039:13647..13847Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 13648..13847 -
1622815571.466229-CDS-S-firma_F_contig1039:14223..142941622815571.466229-CDS-S-firma_F_contig1039:14223..14294Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 14224..14294 -
1696949424.7064059-CDS-S-firma_F_contig1039:14223..142941696949424.7064059-CDS-S-firma_F_contig1039:14223..14294Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 14224..14294 -
1622815571.4778147-CDS-S-firma_F_contig1039:14469..147991622815571.4778147-CDS-S-firma_F_contig1039:14469..14799Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 14470..14799 -
1696949424.7156818-CDS-S-firma_F_contig1039:14469..147991696949424.7156818-CDS-S-firma_F_contig1039:14469..14799Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 14470..14799 -
1622815571.4903643-CDS-S-firma_F_contig1039:15285..153981622815571.4903643-CDS-S-firma_F_contig1039:15285..15398Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 15286..15398 -
1696949424.7337816-CDS-S-firma_F_contig1039:15285..153981696949424.7337816-CDS-S-firma_F_contig1039:15285..15398Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 15286..15398 -
1622815571.5032554-CDS-S-firma_F_contig1039:15506..157071622815571.5032554-CDS-S-firma_F_contig1039:15506..15707Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 15507..15707 -
1696949424.7447603-CDS-S-firma_F_contig1039:15506..157071696949424.7447603-CDS-S-firma_F_contig1039:15506..15707Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1039 15507..15707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1039.558.1

>prot_S-firma_F_contig1039.558.1 ID=prot_S-firma_F_contig1039.558.1|Name=mRNA_S-firma_F_contig1039.558.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=976bp
MASDIPMGEPDADVPPEVAGLDSKQEEPEASAEAAAADQDLVPELAATEK
AEGTNGVTAGDDTVVDEVIDAADDFGGGRVIGRDISENGNEDEPSSRRGR
RGRSRSRSRSKSRSRERAVASRSRSRSRDRGRRREERDRSRGRDRDRDAA
TNGRDTRDRGRDDSRDRSQRDRGRGSSRDRDWGRDERDRARGRDRDSFDH
TRDRGRQTGGQSHGRRDRGPLASMDGGRAGGRDPFRGRGPPNNGPMMQPM
GGNMPMMQPMGMPGAPMFPPQAAAQMVFTTTQRPQPKMGGQQTRTYNILP
MISFKAFMAEQRDDVTPEECKQRYDEYKADYLQRLTHSFIDVHRKEEWFL
ERYHPKTEESKRYTKLKWIDQESTVFGKQLRANPRQFIASASLDPISEEE
RWGGVDTRKKHPRTSSREDASVDAMEEDSERPGEPEPKNEQEDDIDYDVD
AKDFLAHANKVAFIRRIPAWVSTAELGHQIATEAPKHERIVCSDAANTRN
EDYGRSAYIIYDTPEKAAKAVQKLNKMRIYQTPKPKSKIGKKLSGDGKYF
ELRVFSYQPRSHTSVAHEFSGAERIVHDTNLSLKVAEALDTEFRRADSAN
GIKALLAEPEVQAALASSPAGTAQLDLVCAYLKRVYFYLYYRGQQCRDEG
DMIATRGTGRGMPAASKEEIQAVISNAESMEGVNGNGVAEPGASSTDKSE
TDRPNKAGERESETEVVDNLSAATIKQAENAEEKRQKDQAFVERYDARVQ
EEVSKWQAQHTGRTEEGYARCGMMKCLKLFKAPEFVHKHLVNKHPEKYKS
VVDKVSEPFVREMFMADDNKPLPNIVADANTPPVVLLPGAMAMGGAGAMP
QGPPPMGAPGFPMMGGGMPMGPMGPMMPAQMGGMGDFPMQMPIPPDAMMG
SAGRGFRGRGGGGFRGRGIVGGRFGGRGSRPEPTGPRDPRSLVSYVDVDA
PKETTPDLDYGDAFPSKSKKKRKTM*
back to top

mRNA from alignment at S-firma_F_contig1039:7709..15791-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1039.558.1 ID=mRNA_S-firma_F_contig1039.558.1|Name=mRNA_S-firma_F_contig1039.558.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=8083bp|location=Sequence derived from alignment at S-firma_F_contig1039:7709..15791- (Sphaerotrichia firma ET2_F female)
CTGCTAAGAAAGGCTTTCGCAGGCGCTCCTCGCGCAGGGTTGTGTGCATT TGGTTGGCAAGCGTAGATCTACTTGGGAAAGAGTATGGCAAGTGACATCC CGATGGGCGAACCAGACGCAGACGTGCCTCCCGAGGTTGCAGGCTTGGAT TCCAAGCAAGAGGAGCCAGAGGCATCAGCCGAGGCAGCAGCGGCGGATCA AGACCTGGTACCTGAACTAGCCGCGACGGAAAAAGCTGAAGGAACGAATG GGGTAACAGCTGGTGACGACACTGTGGTGGATGAGGTGAGCCACACTCGA TTGTGTGTGGAAATTGTTGGTGGTGAGGCCGACCGACGCACAGGGTTCAC GGTGAGTGATCTTTGCTCCGTGGTGCTCGCTCCCTTCGTCCAGGTGATCG ATGCCGCAGACGACTTTGGCGGTGGGAGGGTTATCGGACGCGACATTAGC GAAAATGGCAATGAAGACGAGCCCTCGAGCAGGCGTGGCCGGCGAGGGAG AAGCAGGTTTGGGACCCTCTTACAAGTAGTAGGTTCGTCAGACTGTGTGG AGAGCGTAGATGCCGCTCTAAGAGTACCTGCCGCCTCGTGCTGGCAGCAG CCAGATCTCAACACCTTCGATGGCTGTCTGTGCGTGTACTGCATGGATGG GCCCTAAAACAAACACCCGCACGCAACAAGAGCCTCTGTCTCCAAAGCAG CCGAATGAGGAAGGAACCATGATGACCGTCGATCCTACAGGGTCAATCCC TCGGCCGCCACACCCCGCGCACATGGCGGCTGACCCATGTTGGACAGGGA AGAAAAAGCCCCTCCTTTTGGTTATTCAAAGGCATACCTTTTTTCTCACA TGGATGACCCCACCTCAAGTTGCTACTGCTGTGGTGAGTTACGCTTGCAC GGCGGCATGTTTGCATAAAAAAAGTGTCCGAGACACAGAGGGTCAGATAC CAATCATTTCTTGCTTGCTGTACCGCCGCTCCGGCCGTCCAGGAGCAGAA GCAGGAGCAAGAGCAGGTCACGGGAGCGAGCTGTGGCCAGCAGAAGCAGG TCGAGGTCGAGAGACAGAGGTCGAAGGAGAGAGGAGCGCGACCGGTCGAG GGGGAGAGACAGAGACAGAGATGCAGCAACCAACGGGCGAGATACGAGAG ACCGGGGGCGCGATGACTCACGCGACAGGAGCCAGAGAGACCGCGGCCGC GGCTCGTCTCGCGATAGGGACTGGGGTAGAGATGAGCGGGATCGCGCGAG GGGCAGGGATCGCGACTCCTTCGACCACACGCGAGACAGAGGTCGCCAAA CGGGAGGCCAAAGCCATGGGAGGTAAACTATTTGTGTTGCAGATTTACGT GCTGATTGTGCGTAGTCCCCGAGGGAAGAAACCTGGCTGTTTTTCAAAGT TGGCACCTCGTGGTACCCCGCTTTGTTGCAAAATAATGTTTACTTTACGG CCCTCCTGCCGAACTATGTATGATATGTATGTCTTTCGCACGCGCAGGCG CGACCGTGGTCCTCTTGCATCCATGGATGGCGGGAGAGCAGGAGGGAGGG ATCCTTTCAGAGGAAGAGGTGCGCTTCCGTAGCGAACTCTCCGGTTCATC CGTGCTGTACACCGCGCCACAGAGAGCCACCGCCGTGGAAAGGTCGTTTG CCGTTGTCGCTGACGTCGGGTAGAAGGTTTAGGTTTAGGGTTAGCGATCT CGTCGTTCATTTGATGCTCTCGTGGCCTTCGTCGTGGTTGGCGCACTCGT CGTGATGTCGTTGCGTACGTGCCTTACTTGTGTTGTTGGTACGTTTGTAC AGCAGTAGTGTCTTTTTAGGCGTAAACAAGAGATATTACCGTATTGAAGT TGGGTCAAGTTTGAAACCCAGCTTCCCCACTACCCTTCTGTGCCGCTGCC CTGCTCATGACGCTTCACCTCGAATCCTGCTGTCATGACGCTAGGTCCAC CAAACAATGGGCCAATGATGCAACCAATGGGAGGAAATATGCCGATGATG CAGCCTATGGGCATGCCAGGGGCACCAATGTTCCCTCCCCAAGCTGCTGC GCAGATGGTGTTCACCACAACTCAGCGGCCCCAGCCGAAGATGGGGGGTC AGCAAACCCGCACGTACAACATTCTGCCGATGATCTCGTTCAAGGTATGT AGAGGATGGTGTATGAATGCGACCCAGCGCGGAGAGGGCGGAAACTTTTT CGTTGCGTTTCACAAACCGCGTACTTTAGTTGGCTGTGGTTTTGTGCTGT CGGATCGAAGTTAACCTACGATATCCAAGCATGTACTCCGTATTGTTTCT TGCTTGATGTACTGTGTATGGGGTAACACTGCATCCTGGTTTCGTATGCA GGCGTTCATGGCGGAACAGCGCGACGATGTGACGCCCGAGGAGTGCAAGC AGCGCTACGACGAGTACAAGGCCGACTACTTGCAACGCCTGACGCACAGC TTCATTGACGTGCACCGCAAGGAGGTAGGTGTATTTAATAGGAGTTTTCT TCGTCGTGTCGAAAGCAAGGAGGTTCAAAGAAAGAGATACATAGTTTGCC CGCTGGTGGTCTCTCCGAGTTAGGGAACGTGCCAGGTGGATATCGATAAC TTTCTTCCTCGCAGAGGCTCAAAATATGAAGCTAGGTGCGTAGCCTAGCA GACCCCACGAGTTGCCGACTCGTTGCTCTACTTTTGTTGCCTTCCTCGCC ATTGTTCAGGAATGGTTCCTGGAACGGTACCACCCCAAGACAGAGGAATC GAAGAGGTACACCAAACTCAAGTGGATAGACCAGGAGTCGACGGTGTTCG GGAAGCAGCTACGCGCCAACCCACGGCAGTTCATCGCCAGTGCTTCACTC GACCCTATCTCCGAGGTAATTTGCTGTATTTTTGGTGTGACCTGCTCTGG ATGACAGCTCGGCGCGGCTGAAGCTGACGTTGCCACGAATGTGCTCCCGA GTAGTTGGGTACGCAGCCTTGGTCGACAATAAATAACGATCACGAGTGAA CCGCCGCTCGTTGCAATGTGCAACAGTTGTCATCGTTGTCATCTTCAGCT TCAGCTGCATGAATGCCCTTGTCATGATAAGAACCACGACTTTTTTGTTT ACTCTGGGGGGCACTTTTAGGAGGAACGCTGGGGTGGCGTGGACACCCGC AAGAAACACCCTCGAACCTCCAGTCGAGAGGATGCGTCTGTTGACGCTAT GGAAGAAGACTCGGAGCGACCCGGCGAGCCAGAGCCGAAGGTAAATAGCG TGAAAATTGACCAACCCCCCGTTTTTGTTTTGCAACAGGCTTGCTCGGTA CCAGTCATTCGTTCACATCGCGTCCCTCTCGAAAATATCAGGCAGTGCCT GCATCTATCCATCGTTCCATTTTATGTAGAACTAACCTGCAAGTGTCGTC TGTTGTTTCCTCCTATGTTTGCACAGAACGAGCAAGAAGACGACATCGAT TACGACGTGGACGCGAAGGATTTTTTGGCGCACGCTAACAAAGTGGCCTT CATCCGCCGGATCCCTGCTTGGGTGTCAACGGCAGAGCTTGGACATCAGG TATGCATGGCTAACTTGTGTACTCATACGGTACGTTCTGTTCTCTCGTGT CGCACCTAGGTGGGGATCTCTTGCTCCCAGATCGTGTCGCGATTTTTGAT GATGAGGTCACCGTCATTTGCGTCTTGTGTCGTAAAAGTGGCGTGGTTTC TGCAGCTAACGATTGCGAATGATTCCGCCGGTTTTCTTAACGAATGCACA GATTGCTACGGAGGCGCCAAAGCACGAGCGCATTGTTTGTTCGGACGCGG CAAACACGCGCAACGAGGACTATGGACGCTCGGCGTATATCATCTACGAC ACCCCGGAGAAGGCGGCGAAGGCTGTTCAGAAGTTGAACAAGATGCGAAT CTATCAGACGCCCAAACCCAAAAGTGAGGGCTGTTGCGGCTGTAAAGCCA AGGTGCACAAAGAATGGCTTTTTTATGCGCAGACAGCACTGTCACGAAAT GCGGACACTTGTCTTTACCCGCCCAGGCCTCCTCGCGGCGAACACAAATG ATCGTTGGTTCACAACGCTCATGTATTCCGGATGTATGTTTTCATGAATG GCGCGTGTTGTACGACACATGAGAGGAACTATGAATTGACTGCTTTCCGT CGCACGTGTTTGCAGGCAAAATCGGCAAGAAGCTTAGCGGAGACGGGAAG TACTTCGAGTTAAGAGTGTTTTCCTACCAGCCACGCAGCCACACCTCCGT GGCCCACGAGTTCTCGGGAGCGGAACGCATCGTCCACGACACGAATCTGA GCTTGAAGGTAGCGGAAGCGCTTGACACGGAGTTCCGTCGGGCCGACAGT GCCAACGGCATCAAGGCGCTTCTCGCTGAACCCGAGGTTAGTTTGTTGAC AACGATACACGGATAACGCTCGCGACTTGGCGGTTCACTTGTGCTAATTT TTTGGGTGAATCGTACCACCAAATTCAGAGGCAAAAGCAGGTGCACACTG TGTATTTTTTCGTGCTTCATTTGTTCGGCGTTCGAGTTTACCGATCGCGC GACGGCGATGGTTGGCGTCAGTAAGCGCACTGCATTGCACACGAACCATA TGCGTTGTCGCACCCGGAGTAGGGGCGCGACCCTTTTCAGCGCAGGCTTG GCATTGTCATTGAGGGAGCTGATCTGAGCTTCTTGTGGTGTCTTACACCC CGACTGGTCTTGAAGAGTCCCACACTCAACAATATTTGTAGTTTCAGTTT GCGGGCCTTGCTTCAACCCATGGAATCACTGCTGTTGAAACCTTGTGGGG GCTCCGCATGCTTGTTTTGCTGTTTTGCTTGGTGTAGGTCCAGGCTGCGC TTGCATCCTCTCCGGCAGGTACAGCTCAGCTGGATCTCGTGTGCGCGTAC CTGAAGCGGGTCTACTTTTACCTGTACTACCGAGGACAGCAGTGCAGGGA CGAGGGAGACATGATTGCCACCAGGGGCACGGGCCGTGGAATGCCGGCGG CATCGAAGGAAGAAATCCAAGCGGCGAGTGACCTCCACCGGCTCAATTTA GACGCCGTCTCTTTGGATAACCTGCGTTCAGTTTACTAGTGGAGTCTCCG GAAAACTTGGACATTTTCAACCAACGATGGCGACCTCTTGGTCGGGTGGC ACGTGTACATGTAGATTACACGATGCGCGCGCCGGATGATGCAAACGCTG GGGCAGTACTTGGATGACTGCACCAATGTCCGAACAAATAACCGATTTTC GTCAATCATCATATGCATTGCGCGCAGGTTATTAGCAACGCAGAATCCAT GGAGGGCGTGAACGGAAATGGTGTTGCCGAACCCGGCGCCAGTTCGACTG ACAAAAGCGAGACAGACCGGCCCAACAAGGCTGGGGAACGAGAATCCGAA ACAGAGGTTGTGGACAATCTCTCCGCCGCCACGATCAAGCAGGCGGAGAA CGCGGAAGAGAAGCGTCAAAAGGACCAAGCTTTCGTCGAACGCTACGATG CACGCGTCCAAGAGGTACAGAGGGAAATGTTGTGTGTTTTGGCGTTTCTT GAGTGATGCGCTTGAGACCGAAAATGTACACCCGACACGGCGATCCACGG GAATAAGCACGCCAACCGAAGGGGCATATCTGTAGATCTACAAGCACCTG TTCGATTCTTGTTGGCACATAACCGGTTTCCCTGTGCTGTAAGTACTCAA AGTAGTAAACTTTTTTTTATTTTTTTTTGTACATGGCAGTAACGCTATGC ATTCGAATTTCTGGTGGGAGTGAAAAGCAGCACAAGCTCGGACGAACACA CATCACACACCTAAGCACCTACGCCTCTCCTGCCTCTGCTGGATGTTTTC CTGTTGTGTGATCTCAGGAAGTGTCGAAGTGGCAAGCCCAGCACACGGGG CGCACCGAAGAAGGCTATGCCCGCTGTGGAATGATGAAGTGCTTGAAGGC AAGTCTCTTAATCTGGCGGCTTTTGATATATGCTTCAGTGTTCTCGTGTT GTTGATGGTCTTCAGGCTGGCTGGTAGGCCCTTCTTTACCGTCGTATTTT GAGGTTGCTCGTCGATTGACAGTTGCCAGATGGTATACGTGAAATGGAAA AGAGGGTGGACGCTATAAGACGCATGTTTTGCAGGGAAAAACGGCAGACG AAACTACCACGGACGACGGCCCGGTGCTCTCCGAGACTTCCAAAAGCGGC GACGTGTGTGAAAATCTCTGTTGTTGCGTATGGTTCGTTCGCAGCTCTTC AAGGCTCCCGAGTTTGTCCACAAGCATCTGGTCAACAAGCACCCCGAGAA GTACAAGTCTGTCGTCGACAAGGTAAGCAAGGTCCCCTTCGCCCAATCGC CAATGCTGTGGAAGCATTGCACCTCAGACATCGCTGGAGAAGAGCAGGCC AAGCGGGGTCTCATCGCAGTTTATGCGGGTGATGTATCACCGGTGACGTT CGTCGTGTGGTCGTTGCGCTCTGTGTCACACCCCTGTCATGTTTTCCTTC CACTTCCTCTCCCTAGGTCTCGGAGCCCTTCGTGCGCGAGATGTTCATGG CGGACGACAACAAGCCCCTGCCGAATATCGTAGCAGACGCAAACACCCCT CCCGTGGTGCTGTTGCCGGGCGCGATGGCGATGGGCGGGGCTGGAGCCAT GCCGCAGGGTCCGCCTCCGATGGGAGCTCCAGGTTTCCCCATGATGGGCG GGGGTATGCCGATGGGGCCGATGGGACCGATGATGCCCGCGCAGATGGGC GGCATGGGCGATTTCCCAATGCAGATGCCGATCCCGCCAGGTGAGTGGCG TGGCACCCATCATGGCAAAGTTACGACCGGAGGGATGAAAGTGCATTTGA CATTTATGGCGACCCATTGGTCCAGTGCCCATTTGCCGCCTCTTGACGCC TGCACACAACATAGCGTGAACTTTTGCGAGCGAGATGTCGCAGGGATTCC TGACGGGTGGCTTGAACACCCGTCATGAGCGCCGCAGCTTCCCCCGCTTC TTCATCTCAGCTATGAACATGAAACTGTTGCCGGTATCCCCCGTGTGTTT CCAGATGCCATGATGGGCTCAGCCGGGCGTGGCTTCAGGGGCAGAGGCGG TGGAGGTTTCCGCGGAAGGGGCATTGTCGGGGGACGTTTTGGAGGGCGAG GCAGTCGGCCGGAACCAACAGGCCCGAGGGATCCGAGGAGCCTCGTTTCC TATGTTGATGTGGATGCTCCCAAGGTAAACTGAATGTTTCCAAGTATAGA GGGGACTTTTCGGTTCCTGTGTCGGGCACGTTCGAAGTTTTTCACATTTT TCTTGCATTAGAGAGCGGGAAGAGGAGAACACTATAGTTTGCATGTTGTC AACATTGTTATGTTCTTCATGAGAACAGCTCGTGTTGTGTGATCCCGGTG ATCCGTTCAACCAAAATACCCGAAGAACAGATGGGACGAAATACAAAACA TCCCTTAGAACTTGCTGAAAAGCTTTTCCTCGTTCGCCGCGAATCATGTG GTTGATTCCAACCGATCTGGCCGGGCTGAGCTGACTCCTGGCGTTGCGGT TATAACCGTTCTTGTTCATGCTATCCAGGAAACGACGCCCGACTTGGACT ACGGTGACGCTTTCCCTTCCAAGTCCAAGAAGAAAAGGAAGACGATGTAA CGCTCACCAACCTTTCGTCGTGTTCGTAGTTTGGGATTGTACTTCACACA TTCCAATTTTTAGATACTAAGGGTGCTACATACATCAAGCGATAGTGGTG ATCGGATACGAAGTGGTAATGTTCCCAGGTTAGATGTATGTCACGTTAGG AAAAATGTAAAATGTACTGGGTGGTATCATAGCCAATTGAACAGTGAGAG ACCCGTTTCAACAGGATTCCGCGATTTATTTGCCCGACGTCGATTACAAG CGTAGCAAGATGGGAAACAGCACAGTGCTCTTGCAAGGTCTGCACCTCGA TGGCCGAAGCAGTTTGGGGTGGTGTGGTGGTGCCGTTTTGTCTTCAGCGA CGTCACGGACACACGGAGGTTCGCTGGTCTCGGTGTGCTATCACGTACCA GTAAACGTTTAACGGAGCTCTAAAAAGAACTTG
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig1039:7709..15791-

>mRNA_S-firma_F_contig1039.558.1 ID=mRNA_S-firma_F_contig1039.558.1|Name=mRNA_S-firma_F_contig1039.558.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=5856bp|location=Sequence derived from alignment at S-firma_F_contig1039:7709..15791- (Sphaerotrichia firma ET2_F female)
ATGGCAAGTGACATCCCGATGGGCGAACCAGACGCAGACGTGCCTCCCGA
GGTTGCAGGCTTGGATTCCAAGCAAGAGGAGCCAGAGGCATCAGCCGAGG
CAGCAGCGGCGGATCAAGACCTGGTACCTGAACTAGCCGCGACGGAAAAA
GCTGAAGGAACGAATGGGGTAACAGCTGGTGACGACACTGTGGTGGATGA
GATGGCAAGTGACATCCCGATGGGCGAACCAGACGCAGACGTGCCTCCCG
AGGTTGCAGGCTTGGATTCCAAGCAAGAGGAGCCAGAGGCATCAGCCGAG
GCAGCAGCGGCGGATCAAGACCTGGTACCTGAACTAGCCGCGACGGAAAA
AGCTGAAGGAACGAATGGGGTAACAGCTGGTGACGACACTGTGGTGGATG
AGGTGATCGATGCCGCAGACGACTTTGGCGGTGGGAGGGTTATCGGACGC
GACATTAGCGAAAATGGCAATGAAGACGAGCCCTCGAGCAGGCGTGGCCG
GCGAGGGAGAAGCAGGTGATCGATGCCGCAGACGACTTTGGCGGTGGGAG
GGTTATCGGACGCGACATTAGCGAAAATGGCAATGAAGACGAGCCCTCGA
GCAGGCGTGGCCGGCGAGGGAGAAGCAGGAGCAGAAGCAGGAGCAAGAGC
AGGTCACGGGAGCGAGCTGTGGCCAGCAGAAGCAGGTCGAGGTCGAGAGA
CAGAGGTCGAAGGAGAGAGGAGCGCGACCGGTCGAGGGGGAGAGACAGAG
ACAGAGATGCAGCAACCAACGGGCGAGATACGAGAGACCGGGGGCGCGAT
GACTCACGCGACAGGAGCCAGAGAGACCGCGGCCGCGGCTCGTCTCGCGA
TAGGGACTGGGGTAGAGATGAGCGGGATCGCGCGAGGGGCAGGGATCGCG
ACTCCTTCGACCACACGCGAGACAGAGGTCGCCAAACGGGAGGCCAAAGC
CATGGGAGGAGCAGAAGCAGGAGCAAGAGCAGGTCACGGGAGCGAGCTGT
GGCCAGCAGAAGCAGGTCGAGGTCGAGAGACAGAGGTCGAAGGAGAGAGG
AGCGCGACCGGTCGAGGGGGAGAGACAGAGACAGAGATGCAGCAACCAAC
GGGCGAGATACGAGAGACCGGGGGCGCGATGACTCACGCGACAGGAGCCA
GAGAGACCGCGGCCGCGGCTCGTCTCGCGATAGGGACTGGGGTAGAGATG
AGCGGGATCGCGCGAGGGGCAGGGATCGCGACTCCTTCGACCACACGCGA
GACAGAGGTCGCCAAACGGGAGGCCAAAGCCATGGGAGGCGCGACCGTGG
TCCTCTTGCATCCATGGATGGCGGGAGAGCAGGAGGGAGGGATCCTTTCA
GAGGAAGAGGCGCGACCGTGGTCCTCTTGCATCCATGGATGGCGGGAGAG
CAGGAGGGAGGGATCCTTTCAGAGGAAGAGGTCCACCAAACAATGGGCCA
ATGATGCAACCAATGGGAGGAAATATGCCGATGATGCAGCCTATGGGCAT
GCCAGGGGCACCAATGTTCCCTCCCCAAGCTGCTGCGCAGATGGTGTTCA
CCACAACTCAGCGGCCCCAGCCGAAGATGGGGGGTCAGCAAACCCGCACG
TACAACATTCTGCCGATGATCTCGTTCAAGGTCCACCAAACAATGGGCCA
ATGATGCAACCAATGGGAGGAAATATGCCGATGATGCAGCCTATGGGCAT
GCCAGGGGCACCAATGTTCCCTCCCCAAGCTGCTGCGCAGATGGTGTTCA
CCACAACTCAGCGGCCCCAGCCGAAGATGGGGGGTCAGCAAACCCGCACG
TACAACATTCTGCCGATGATCTCGTTCAAGGCGTTCATGGCGGAACAGCG
CGACGATGTGACGCCCGAGGAGTGCAAGCAGCGCTACGACGAGTACAAGG
CCGACTACTTGCAACGCCTGACGCACAGCTTCATTGACGTGCACCGCAAG
GAGGCGTTCATGGCGGAACAGCGCGACGATGTGACGCCCGAGGAGTGCAA
GCAGCGCTACGACGAGTACAAGGCCGACTACTTGCAACGCCTGACGCACA
GCTTCATTGACGTGCACCGCAAGGAGGAATGGTTCCTGGAACGGTACCAC
CCCAAGACAGAGGAATCGAAGAGGTACACCAAACTCAAGTGGATAGACCA
GGAGTCGACGGTGTTCGGGAAGCAGCTACGCGCCAACCCACGGCAGTTCA
TCGCCAGTGCTTCACTCGACCCTATCTCCGAGGAATGGTTCCTGGAACGG
TACCACCCCAAGACAGAGGAATCGAAGAGGTACACCAAACTCAAGTGGAT
AGACCAGGAGTCGACGGTGTTCGGGAAGCAGCTACGCGCCAACCCACGGC
AGTTCATCGCCAGTGCTTCACTCGACCCTATCTCCGAGGAGGAACGCTGG
GGTGGCGTGGACACCCGCAAGAAACACCCTCGAACCTCCAGTCGAGAGGA
TGCGTCTGTTGACGCTATGGAAGAAGACTCGGAGCGACCCGGCGAGCCAG
AGCCGAAGGAGGAACGCTGGGGTGGCGTGGACACCCGCAAGAAACACCCT
CGAACCTCCAGTCGAGAGGATGCGTCTGTTGACGCTATGGAAGAAGACTC
GGAGCGACCCGGCGAGCCAGAGCCGAAGAACGAGCAAGAAGACGACATCG
ATTACGACGTGGACGCGAAGGATTTTTTGGCGCACGCTAACAAAGTGGCC
TTCATCCGCCGGATCCCTGCTTGGGTGTCAACGGCAGAGCTTGGACATCA
GAACGAGCAAGAAGACGACATCGATTACGACGTGGACGCGAAGGATTTTT
TGGCGCACGCTAACAAAGTGGCCTTCATCCGCCGGATCCCTGCTTGGGTG
TCAACGGCAGAGCTTGGACATCAGATTGCTACGGAGGCGCCAAAGCACGA
GCGCATTGTTTGTTCGGACGCGGCAAACACGCGCAACGAGGACTATGGAC
GCTCGGCGTATATCATCTACGACACCCCGGAGAAGGCGGCGAAGGCTGTT
CAGAAGTTGAACAAGATGCGAATCTATCAGACGCCCAAACCCAAAAATTG
CTACGGAGGCGCCAAAGCACGAGCGCATTGTTTGTTCGGACGCGGCAAAC
ACGCGCAACGAGGACTATGGACGCTCGGCGTATATCATCTACGACACCCC
GGAGAAGGCGGCGAAGGCTGTTCAGAAGTTGAACAAGATGCGAATCTATC
AGACGCCCAAACCCAAAAGCAAAATCGGCAAGAAGCTTAGCGGAGACGGG
AAGTACTTCGAGTTAAGAGTGTTTTCCTACCAGCCACGCAGCCACACCTC
CGTGGCCCACGAGTTCTCGGGAGCGGAACGCATCGTCCACGACACGAATC
TGAGCTTGAAGGTAGCGGAAGCGCTTGACACGGAGTTCCGTCGGGCCGAC
AGTGCCAACGGCATCAAGGCGCTTCTCGCTGAACCCGAGGCAAAATCGGC
AAGAAGCTTAGCGGAGACGGGAAGTACTTCGAGTTAAGAGTGTTTTCCTA
CCAGCCACGCAGCCACACCTCCGTGGCCCACGAGTTCTCGGGAGCGGAAC
GCATCGTCCACGACACGAATCTGAGCTTGAAGGTAGCGGAAGCGCTTGAC
ACGGAGTTCCGTCGGGCCGACAGTGCCAACGGCATCAAGGCGCTTCTCGC
TGAACCCGAGGTCCAGGCTGCGCTTGCATCCTCTCCGGCAGGTACAGCTC
AGCTGGATCTCGTGTGCGCGTACCTGAAGCGGGTCTACTTTTACCTGTAC
TACCGAGGACAGCAGTGCAGGGACGAGGGAGACATGATTGCCACCAGGGG
CACGGGCCGTGGAATGCCGGCGGCATCGAAGGAAGAAATCCAAGCGGTCC
AGGCTGCGCTTGCATCCTCTCCGGCAGGTACAGCTCAGCTGGATCTCGTG
TGCGCGTACCTGAAGCGGGTCTACTTTTACCTGTACTACCGAGGACAGCA
GTGCAGGGACGAGGGAGACATGATTGCCACCAGGGGCACGGGCCGTGGAA
TGCCGGCGGCATCGAAGGAAGAAATCCAAGCGGTTATTAGCAACGCAGAA
TCCATGGAGGGCGTGAACGGAAATGGTGTTGCCGAACCCGGCGCCAGTTC
GACTGACAAAAGCGAGACAGACCGGCCCAACAAGGCTGGGGAACGAGAAT
CCGAAACAGAGGTTGTGGACAATCTCTCCGCCGCCACGATCAAGCAGGCG
GAGAACGCGGAAGAGAAGCGTCAAAAGGACCAAGCTTTCGTCGAACGCTA
CGATGCACGCGTCCAAGAGGTTATTAGCAACGCAGAATCCATGGAGGGCG
TGAACGGAAATGGTGTTGCCGAACCCGGCGCCAGTTCGACTGACAAAAGC
GAGACAGACCGGCCCAACAAGGCTGGGGAACGAGAATCCGAAACAGAGGT
TGTGGACAATCTCTCCGCCGCCACGATCAAGCAGGCGGAGAACGCGGAAG
AGAAGCGTCAAAAGGACCAAGCTTTCGTCGAACGCTACGATGCACGCGTC
CAAGAGGAAGTGTCGAAGTGGCAAGCCCAGCACACGGGGCGCACCGAAGA
AGGCTATGCCCGCTGTGGAATGATGAAGTGCTTGAAGGAAGTGTCGAAGT
GGCAAGCCCAGCACACGGGGCGCACCGAAGAAGGCTATGCCCGCTGTGGA
ATGATGAAGTGCTTGAAGCTCTTCAAGGCTCCCGAGTTTGTCCACAAGCA
TCTGGTCAACAAGCACCCCGAGAAGTACAAGTCTGTCGTCGACAAGCTCT
TCAAGGCTCCCGAGTTTGTCCACAAGCATCTGGTCAACAAGCACCCCGAG
AAGTACAAGTCTGTCGTCGACAAGGTCTCGGAGCCCTTCGTGCGCGAGAT
GTTCATGGCGGACGACAACAAGCCCCTGCCGAATATCGTAGCAGACGCAA
ACACCCCTCCCGTGGTGCTGTTGCCGGGCGCGATGGCGATGGGCGGGGCT
GGAGCCATGCCGCAGGGTCCGCCTCCGATGGGAGCTCCAGGTTTCCCCAT
GATGGGCGGGGGTATGCCGATGGGGCCGATGGGACCGATGATGCCCGCGC
AGATGGGCGGCATGGGCGATTTCCCAATGCAGATGCCGATCCCGCCAGGT
CTCGGAGCCCTTCGTGCGCGAGATGTTCATGGCGGACGACAACAAGCCCC
TGCCGAATATCGTAGCAGACGCAAACACCCCTCCCGTGGTGCTGTTGCCG
GGCGCGATGGCGATGGGCGGGGCTGGAGCCATGCCGCAGGGTCCGCCTCC
GATGGGAGCTCCAGGTTTCCCCATGATGGGCGGGGGTATGCCGATGGGGC
CGATGGGACCGATGATGCCCGCGCAGATGGGCGGCATGGGCGATTTCCCA
ATGCAGATGCCGATCCCGCCAGATGCCATGATGGGCTCAGCCGGGCGTGG
CTTCAGGGGCAGAGGCGGTGGAGGTTTCCGCGGAAGGGGCATTGTCGGGG
GACGTTTTGGAGGGCGAGGCAGTCGGCCGGAACCAACAGGCCCGAGGGAT
CCGAGGAGCCTCGTTTCCTATGTTGATGTGGATGCTCCCAAGATGCCATG
ATGGGCTCAGCCGGGCGTGGCTTCAGGGGCAGAGGCGGTGGAGGTTTCCG
CGGAAGGGGCATTGTCGGGGGACGTTTTGGAGGGCGAGGCAGTCGGCCGG
AACCAACAGGCCCGAGGGATCCGAGGAGCCTCGTTTCCTATGTTGATGTG
GATGCTCCCAAGGAAACGACGCCCGACTTGGACTACGGTGACGCTTTCCC
TTCCAAGTCCAAGAAGAAAAGGAAGACGATGTAAGAAACGACGCCCGACT
TGGACTACGGTGACGCTTTCCCTTCCAAGTCCAAGAAGAAAAGGAAGACG
ATGTAA
back to top