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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 591 |
| Cds size | 588 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815568.5248394-CDS-S-firma_F_contig10365:2593..3072 | 1622815568.5248394-CDS-S-firma_F_contig10365:2593..3072 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10365 2594..3072 - |
| 1696949422.207974-CDS-S-firma_F_contig10365:2593..3072 | 1696949422.207974-CDS-S-firma_F_contig10365:2593..3072 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10365 2594..3072 - |
| 1622815568.5442014-CDS-S-firma_F_contig10365:4369..4478 | 1622815568.5442014-CDS-S-firma_F_contig10365:4369..4478 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10365 4370..4478 - |
| 1696949422.2298558-CDS-S-firma_F_contig10365:4369..4478 | 1696949422.2298558-CDS-S-firma_F_contig10365:4369..4478 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10365 4370..4478 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10365.519.1 >prot_S-firma_F_contig10365.519.1 ID=prot_S-firma_F_contig10365.519.1|Name=mRNA_S-firma_F_contig10365.519.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=196bp
REAPGQSTLNLHTPLAMEAECAHDGDNETPPLRVAQAEALPLGPIKHQHR
HRHHRQRDERPTRRELRWALPAEGDNTSTNTLNILNKANGPPAAAAAAAA
AAAEGAVFSTAPRRSTLRRATSSSPPPSLPSSRQRQPRDGLRRRHSTRPR
ARGVESSQSPEMFAGGRRRHSASVGPAVRFSRRRQSGAATAATAAA back to topmRNA from alignment at S-firma_F_contig10365:2592..4478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_F_contig10365.519.1 ID=mRNA_S-firma_F_contig10365.519.1|Name=mRNA_S-firma_F_contig10365.519.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1887bp|location=Sequence derived from alignment at S-firma_F_contig10365:2592..4478- (Sphaerotrichia firma ET2_F female)
AGAGAGGCACCGGGGCAGTCCACACTAAATTTGCACACGCCGTTGGCCAT
GGAGGCGGAGTGTGCCCATGACGGCGACAACGAGACCCCTCCGCTTCGAG
TAGCTCAAGGTATGCTAGCATAGATACACAAGTAAACACAGGAGATAAAT
GCCGGAGCGCGCAAAGTACGTACGACCTGCTTTCGGGGATGCGAGAGAAC
AAAAAAAAGACGAGACTAAAATATTTCTGTGAGTGACGAGACCAGAGCCT
TCGCTTGTCGACCAGCGTCAAGTGTCAAGCCCAGCCACGGCTCTCAGCTC
TTTAGCAGACGCGCGAAGTGGCCTTCCGTACACCCTGGAAGCCATGCCGG
GGCTTGGCGTCGTGTGCCGGTAGCTGAACATCTGTTGTGTTCCGGGACCT
GCTCCGGACGATGGTTCAATGGTTCATCACCCAAATTGAACTTCTACGAT
GATGATGAGCCAATTTTGCAATTTTGCACGCAGAAACTGACACGCGTACA
TACCTGTTGATGTGTTGACAGCGCTCGTTGAGCCTCAGGGTTGAGTCTTG
GAAGACGCGCCTCGTGCAGGCCCTGTCACGGGTCTGGGTGTTGGCTTAGG
AGCCTGCCGCTAGTAGGAAATGCTGTTGCTGTAGCCTATCGTCCAGCCAG
TGTACGAACGGGATGGGAAACGAAAAATTATGTAAAAAATGGATGACTGC
TGCTGTGTTACCGGAAAACGGTGTGTTGTCTATGTGTACATACATACGTA
AGCTTCATTCACCTTTTGTCCACACACGCGCACCGTTGGCTCGCCCACTG
CTGTGCTTGCGCTCCACCCCGCCGGTGGGCACACAAACGCGCTTACACCA
AGGGCGAAAGAGAGGAGATGGAACAAAGACATACGGCTGTAGACCGGTAC
CGTAGTTGATGGTGCTGAGACCAACGGTCGAAACGAGCGGGACACCCAAC
GTATGATAGTGCTCATCTAGATCTACAAGTAGTGCAGCCACACCGTGGGA
TATCTTGCTACAGTAGCAGCAGCAGTGGCACGAATTTAAGTCTTGGGCTG
TGTCTGCTTTGGTTGTTGTGCATGGCTGGACCGTTGCCTGTTCGTGCGTT
GTTCGTTACCAGCACACCCACACCTACATACGAGACTATAAGCCCTACTT
GTACGAAAATCTCCTTCGCGGACCCCCCTGCCGTCGGTTGTCGCCGCTGT
TCTCTCTGTACGCTGTCCCTTCTCTGTACATACATACATACCTACAAACG
TTGCAACCCATGTTTCCAAGATGTGCTCACTTCCACGGAACAAACAGCCC
CTTTCCGTGAAATCCACGTGTCGCCGTCTTGCCCTCTCTCCACGAACAGC
AACCAGCGACGCTAATTTTTACTTTTCCGCCGTTGACGTGACCGGTACCG
CTGCAGCCGAGGCGCTTCCCCTGGGGCCGATCAAGCACCAACACCGACAC
CGACACCACCGGCAGCGGGATGAGCGGCCTACGCGGCGCGAGCTGAGATG
GGCGCTTCCCGCCGAAGGAGACAACACCAGCACCAACACCCTCAACATCC
TCAACAAAGCCAACGGCCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGAAGGGGCCGTGTTCTCCACCGCCCCGCGAAGATCCACCCTGAG
GAGGGCCACCTCCTCCTCCCCGCCGCCCTCGCTTCCTTCGTCCCGGCAGC
GGCAGCCGCGCGACGGCCTCCGACGGCGCCACTCCACCCGCCCCCGCGCC
CGCGGCGTGGAATCGAGCCAATCTCCGGAGATGTTCGCCGGGGGTCGGCG
GCGGCACTCGGCGTCGGTGGGACCCGCGGTTAGGTTTAGTAGGCGGAGGC
AGAGCGGGGCGGCGACGGCGGCGACGGCGGCGGCGGC back to topCoding sequence (CDS) from alignment at S-firma_F_contig10365:2592..4478- >mRNA_S-firma_F_contig10365.519.1 ID=mRNA_S-firma_F_contig10365.519.1|Name=mRNA_S-firma_F_contig10365.519.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1176bp|location=Sequence derived from alignment at S-firma_F_contig10365:2592..4478- (Sphaerotrichia firma ET2_F female)
AGAGAGGCACCGGGGCAGTCCACACTAAATTTGCACACGCCGTTGGCCAT
GGAGGCGGAGTGTGCCCATGACGGCGACAACGAGACCCCTCCGCTTCGAG
TAGCTCAAGAGAGAGGCACCGGGGCAGTCCACACTAAATTTGCACACGCC
GTTGGCCATGGAGGCGGAGTGTGCCCATGACGGCGACAACGAGACCCCTC
CGCTTCGAGTAGCTCAAGCCGAGGCGCTTCCCCTGGGGCCGATCAAGCAC
CAACACCGACACCGACACCACCGGCAGCGGGATGAGCGGCCTACGCGGCG
CGAGCTGAGATGGGCGCTTCCCGCCGAAGGAGACAACACCAGCACCAACA
CCCTCAACATCCTCAACAAAGCCAACGGCCCTCCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGAAGGGGCCGTGTTCTCCACCGCCCCGCGAAG
ATCCACCCTGAGGAGGGCCACCTCCTCCTCCCCGCCGCCCTCGCTTCCTT
CGTCCCGGCAGCGGCAGCCGCGCGACGGCCTCCGACGGCGCCACTCCACC
CGCCCCCGCGCCCGCGGCGTGGAATCGAGCCAATCTCCGGAGATGTTCGC
CGGGGGTCGGCGGCGGCACTCGGCGTCGGTGGGACCCGCGGTTAGGTTTA
GTAGGCGGAGGCAGAGCGGGGCGGCGACGGCGGCGACGGCGGCGGCGCCG
AGGCGCTTCCCCTGGGGCCGATCAAGCACCAACACCGACACCGACACCAC
CGGCAGCGGGATGAGCGGCCTACGCGGCGCGAGCTGAGATGGGCGCTTCC
CGCCGAAGGAGACAACACCAGCACCAACACCCTCAACATCCTCAACAAAG
CCAACGGCCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAA
GGGGCCGTGTTCTCCACCGCCCCGCGAAGATCCACCCTGAGGAGGGCCAC
CTCCTCCTCCCCGCCGCCCTCGCTTCCTTCGTCCCGGCAGCGGCAGCCGC
GCGACGGCCTCCGACGGCGCCACTCCACCCGCCCCCGCGCCCGCGGCGTG
GAATCGAGCCAATCTCCGGAGATGTTCGCCGGGGGTCGGCGGCGGCACTC
GGCGTCGGTGGGACCCGCGGTTAGGTTTAGTAGGCGGAGGCAGAGCGGGG
CGGCGACGGCGGCGACGGCGGCGGCG back to top
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