mRNA_S-firma_F_contig1035.496.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 9.090e-143 Identity = 234/305 (76.72%), Postives = 254/305 (83.28%), Query Frame = 2
Query: 44 MYEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAV-------------AARSPTAVAXXAAP-------SRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
MY+ F+TL +S PA VLHVQINRP+K NAMNA+FWIE R+CF I+ED D+RAVVVSG+G+HFSAGLDL+DT+NFDAIG ATKDVARRAFRFRKLALAMQESF+AVERCPQPVIAAIHGACVGGAVDLACACD+RLCSEDA FC+AEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEA+ MGFVSRVV AA A P AV XX S+RA+VVAAS+L ASEIARQSPVAVFGTKRNL+YARDHSV DGLEYAATWSGAALQAGDL AM A
Sbjct: 1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 305
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE) HSP 1 Score: 265 bits (677), Expect = 2.320e-82 Identity = 148/282 (52.48%), Postives = 187/282 (66.31%), Query Frame = 2
Query: 56 FDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSN-FDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
++TL++S PA VL V++NRP K NAMN FW E ECF++I D+D R VVV+G G+ F+AGLDL D + F G D AR+A RK+ L+ QESFS +E+CP+PVIAAIH AC+GG VDL CACD+RLCS DA F I EV +GLAADVGTLQR+PKIVGN+SL REL+YT R A EA G VS + P + +++A+ MAS+IA +SPVAV GTK NL Y+RDHSV +GL Y ATW+ + LQ D+ A+ A
Sbjct: 50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIY--------------------PDKE-SLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQA 310
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT) HSP 1 Score: 259 bits (662), Expect = 3.110e-80 Identity = 146/294 (49.66%), Postives = 186/294 (63.27%), Query Frame = 2
Query: 17 VFHDNRGSMMYEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
VF S F+TL ++ P V V INRP K NAMN FW E CF++IA DT+ RAVV+SG G+ F+AGLDL D ++ + +DV+RRA+ RK L QESFS +E+CPQPVIAAIH ACVGG VD+ CACD+R C+ DA F + EV++GLAADVGTLQR+PKIVGNESL REL YT R + EA + G VSR+ R ++ ++L +AS IA+ SPVAV GTK NL Y+RDH V + LEY A+W+ + LQ D+ A+ A
Sbjct: 29 VFISRMMSTQEYKFETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIF---------------------QDRESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQA 301
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A3S1BDV2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BDV2_ELYCH) HSP 1 Score: 258 bits (660), Expect = 7.270e-80 Identity = 142/282 (50.35%), Postives = 189/282 (67.02%), Query Frame = 2
Query: 53 DFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
+F TL + SPA V HV++NRP ++NAMN FW E ECF ++AED D R V++SG G+ F++GLDLAD F I A +D +R+AF+ K QESFSA+E+CP+PVIAA+H AC+GG +D+ ACD+R C++DA F I EV VGLAADVGTLQR P+IVGN+SL REL YT R F + EA ++GFVSRV+ + ++ +L MAS IA +SPVAV G+K NL+Y+RDHSV +GL+Y A W+ LQ+ D+ A +A
Sbjct: 47 EFKTLKVHSPAEFVKHVELNRPERLNAMNMDFWREMVECFDKLAEDEDCRVVILSGSGKAFTSGLDLADNGLFQII-MADEDCSRKAFKMNKAIPKFQESFSAIEKCPKPVIAAVHSACIGGGIDMISACDIRFCTQDAWFQIKEVDVGLAADVGTLQRFPRIVGNDSLTRELVYTARKFYSDEAKSIGFVSRVLVD---------------------KDQMMKTALDMASTIAAKSPVAVQGSKINLVYSRDHSVPEGLDYNAKWNITMLQSEDVMKAASA 306
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.880e-79 Identity = 141/282 (50.00%), Postives = 186/282 (65.96%), Query Frame = 2
Query: 47 YEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLAD----TSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDL 880
Y F+TL++ P VLHV++NRP + NAMNAQ+W E R F IA D ++RAVV+SG G+HFSAG+D+ T N + DVAR A + ++L L+MQESF+ + RCPQPVIAAIHGAC+GGAVDL ACD+R CS+ A F + EV VGL ADVGTLQR+P++VGN+S R++ Y+ RTFGAAEA G VS+V + R ++AA++ A+ IA SP+AV GTKR+L +++DHSV DGL + A W+ AAL DL
Sbjct: 5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVCS--------------------GGREGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDL 266
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: UPI001F04F430 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F430) HSP 1 Score: 256 bits (654), Expect = 4.220e-79 Identity = 142/287 (49.48%), Postives = 186/287 (64.81%), Query Frame = 2
Query: 38 SMMYEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
S++ DF+TL ++ P V V INRP K NAMN FW E CF +IA ++D R VV+S G+ F+AGLDL D S+ + + KDV+R+A+ RK + QESFS +ERCPQPVIAAIH ACVGG VD+ C+CD+R C+ DA F I EV++GLAADVGTLQR+PKIVGNESL REL +T R F A EA + G VSR+ + ++ +L +AS IA+ SP+A+ GTK+NL Y+RDH V + LEY ATW+ + LQ D+ A+ A
Sbjct: 32 SLLNHDFETLELTQPRNHVYQVNINRPEKRNAMNQTFWKEMVTCFEKIANESDCRVVVLSAAGKIFTAGLDLMDFSSI-VLQQDDKDVSRKAYNMRKTIVQCQESFSVIERCPQPVIAAIHSACVGGGVDMICSCDIRWCTSDAWFQIKEVELGLAADVGTLQRLPKIVGNESLVRELCFTARKFMAEEAKSFGLVSRIF---------------------QDKESLLNGALDLASHIAKMSPIAITGTKKNLNYSRDHGVDESLEYMATWNMSMLQTEDILKAVQA 296
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A3Q2EFD2_CYPVA (Enoyl-CoA hydratase 1 n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2EFD2_CYPVA) HSP 1 Score: 255 bits (652), Expect = 8.950e-79 Identity = 142/275 (51.64%), Postives = 183/275 (66.55%), Query Frame = 2
Query: 56 FDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDL 880
F TL++S PA V HVQ++RP K+NAMN FW E ECF+ I+ED D R VVVSG G+ F+AG+DL D + D + D AR A+ RKL QE+FS +E+CP+PV+ A+HGAC+GG VDL ACD+RLC++DA F + EV +GLAADVGTLQR+PK++G+ SL ELA T R A EA + G VSRV P + A ++A +L MA EIA +SPVAV GTK NLIY+RDHSV +GL+Y ATW+ + LQ D+
Sbjct: 37 FTTLAVSRPAEAVTHVQLHRPKKLNAMNKAFWREMVECFNEISEDQDCRVVVVSGAGKMFTAGIDLMDMAG-DMLQPEGDDAARVAWNVRKLVAKYQETFSVIEKCPKPVLVAVHGACIGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYADEAKSSGLVSRVF--------------------PDKDA-MMAGALEMAGEIAARSPVAVQGTKLNLIYSRDHSVAEGLDYMATWNMSMLQTQDV 289
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A6M5KEJ4_9DINO (Dienoyl coA isomerase n=1 Tax=Gambierdiscus pacificus TaxID=439314 RepID=A0A6M5KEJ4_9DINO) HSP 1 Score: 254 bits (648), Expect = 1.370e-78 Identity = 143/290 (49.31%), Postives = 184/290 (63.45%), Query Frame = 2
Query: 41 MMYEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLAD----TSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDLGVAMAA 898
M Y ++TL ++ +LHV++NRP K+NAMN +FW E RECF AEDT+ RA+V+S G FS+GLDL+D S A G+ +D R A+R R+ L QESF+A+E CPQPVI HGA VGG +DL C C +R S DA F I EV +GLAADVGTLQR+PKI+GNE RELAYT R F A EA +GF++R+ R +AA++ +A EIA++ P+AV GTKR L + R+HSV DGLEY ATW+GA +Q+ DL A AA
Sbjct: 1 MQYGPYETLRVTKEDG-ILHVELNRPQKLNAMNRRFWQETRECFSAAAEDTEARAIVISAQGRAFSSGLDLSDMAPPASEEPASGKPKRDAGRLAYRIRREVLHTQESFNAIEACPQPVIVVGHGAVVGGGIDLMCTCCIRYASRDAWFTIKEVDIGLAADVGTLQRLPKIIGNEGAVRELAYTARKFTAEEALALGFLTRLF---------------------DTRDQALAAAMSLAKEIAQKPPLAVVGTKRMLDFTRNHSVQDGLEYVATWNGAMMQSPDLATAAAA 268
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A672H238_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672H238_SALFA) HSP 1 Score: 254 bits (650), Expect = 3.770e-78 Identity = 141/275 (51.27%), Postives = 181/275 (65.82%), Query Frame = 2
Query: 56 FDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDL 880
+ TL++S PAP V HV+I+RP K NAMN FW E ECF I+ED D RAVVVSG G+ F+AG+D+ D + + + D AR ++ RK QESFSA+ERCP+PV+ AIHGACVGG VDL ACD+RLC++DA F + EV +GLAADVGTLQR+PK++G+ SL ELA T R A EA + G VSRV +A ++A +L MA EIA +SPVAV GTK NL+Y+RDHSV +GL++ A W+ + LQ DL
Sbjct: 61 YTTLAVSRPAPAVTHVEIHRPDKRNAMNKAFWREMVECFSEISEDQDCRAVVVSGAGKTFTAGIDIVDLAG-EVLQPRGDDTARISYNIRKTITHFQESFSAIERCPKPVLVAIHGACVGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYADEAKSSGLVSRVF---------------------QHKAALMAGALEMAEEIAGRSPVAVQGTKINLLYSRDHSVEEGLQFMAAWNMSMLQTADL 313
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Match: A0A672GLS1_SALFA (BED-type domain-containing protein n=10 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GLS1_SALFA) HSP 1 Score: 254 bits (650), Expect = 7.810e-78 Identity = 141/275 (51.27%), Postives = 181/275 (65.82%), Query Frame = 2
Query: 56 FDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDTDLRAVVVSGIGEHFSAGLDLADTSNFDAIGEATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEAATMGFVSRVVTPAAAAVAARSPTAVAXXAAPSRRADVVAASLLMASEIARQSPVAVFGTKRNLIYARDHSVGDGLEYAATWSGAALQAGDL 880
+ TL++S PAP V HV+I+RP K NAMN FW E ECF I+ED D RAVVVSG G+ F+AG+D+ D + + + D AR ++ RK QESFSA+ERCP+PV+ AIHGACVGG VDL ACD+RLC++DA F + EV +GLAADVGTLQR+PK++G+ SL ELA T R A EA + G VSRV +A ++A +L MA EIA +SPVAV GTK NL+Y+RDHSV +GL++ A W+ + LQ DL
Sbjct: 85 YTTLAVSRPAPAVTHVEIHRPDKRNAMNKAFWREMVECFSEISEDQDCRAVVVSGAGKTFTAGIDIVDLAG-EVLQPRGDDTARISYNIRKTITHFQESFSAIERCPKPVLVAIHGACVGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYADEAKSSGLVSRVF---------------------QHKAALMAGALEMAEEIAGRSPVAVQGTKINLLYSRDHSVEEGLQFMAAWNMSMLQTADL 337 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1035.496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1035.496.1 >prot_S-firma_F_contig1035.496.1 ID=prot_S-firma_F_contig1035.496.1|Name=mRNA_S-firma_F_contig1035.496.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=321bp MMYEDFDTLSISSPAPCVLHVQINRPAKVNAMNAQFWIEFRECFHRIAEDback to top mRNA from alignment at S-firma_F_contig1035:2886..7284- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1035.496.1 ID=mRNA_S-firma_F_contig1035.496.1|Name=mRNA_S-firma_F_contig1035.496.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4399bp|location=Sequence derived from alignment at S-firma_F_contig1035:2886..7284- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1035:2886..7284- >mRNA_S-firma_F_contig1035.496.1 ID=mRNA_S-firma_F_contig1035.496.1|Name=mRNA_S-firma_F_contig1035.496.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1926bp|location=Sequence derived from alignment at S-firma_F_contig1035:2886..7284- (Sphaerotrichia firma ET2_F female)back to top |