mRNA_S-firma_F_contig10344.491.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10344.491.1
Unique NamemRNA_S-firma_F_contig10344.491.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A9UUX2_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UUX2_MONBE)

HSP 1 Score: 271 bits (692), Expect = 7.700e-82
Identity = 138/265 (52.08%), Postives = 179/265 (67.55%), Query Frame = 1
Query:    1 MWAPVLTELLQVNGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPG--PTNVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYI 789
            +W P    LL VNG  N  FS +   +T WVCG T+  VCD QS +WQ  + + +    +++ +  ++  +G+  +WV+G+ V+                +RVG +      P  V + NN I RGGL+FPSGTPIL+QK+ NV V+ N+V +F Y GISVGWSWN+ DPS T NVTVAYNH+HDLG+GT+RQLGDAMA VYTLGVLH T V +N +  VYA+YTGG+ LSQDQGSSDI+F +NV   TTGASQTQHYGVNNT++
Sbjct:  284 IWIPQTDNLLFVNGTHNHDFSGIDFTYTNWVCGPTT--VCDKQSASWQRQAAIDLFDVVNVTFSNNEIVGAGACAVWVHGSSVN-ITVDRNVLRDLGTGALRVGDETPEDGVPYRVTLQNNIIHRGGLSFPSGTPILIQKAINVSVVHNEVSYFSYAGISVGWSWNFEDPSSTANVTVAYNHVHDLGTGTFRQLGDAMAAVYTLGVLHGTEVHHNLLHDVYAWYTGGFCLSQDQGSSDISFHDNVCHGTTGASQTQHYGVNNTWV 545          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A815LBT1_9BILA (Hypothetical protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A815LBT1_9BILA)

HSP 1 Score: 189 bits (481), Expect = 3.940e-50
Identity = 134/399 (33.58%), Postives = 204/399 (51.13%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPGPT---NVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQP--------------SNFTFTRNVVVSTNTSGALFDGY----YLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPL-ISDPFHLNF-TLAPDSPAFKLGF 1164
            N   +I+  ++A++H+AW    T     D Q+ A+ T++ L+I   + I +T  +++ +GSYGIW+   G +               G+R+G  +SP PT   ++ I +N ++ GG  FPSG  I+  ++ +V +  N +    YTGIS+GW W YA PS T NV V  N+I+++G       G    G+YTLG+   T++  N I+ V+++    +G+  D+G+S I   NNVV++T  AS  QHYG NNT INN+F             AS+  P  PD P              ++ TF RN+V  T      F G     YL+D    +    NL+++S  A      Q ++ T      QD GS+IADPL + D    +F T+  +SPA KLGF
Sbjct:  319 NPIEDIIIDNVAIQHSAWNIDRTQQ--ADGQAAAFLTSAPLYIANATSIIITDVEISHTGSYGIWIK-EGTNSINIINSLITDTGAGGIRIGQMISPVPTPTTSIHIISNEVSYGGNVFPSGVGIISHRAVDVVIADNSIHHHRYTGISIGWEWGYA-PSYTSNVLVQGNYIYNIGQHILCDQG----GIYTLGIQPGTIIHGNVIKNVFSFAMYMWGIYLDEGTSQIIVSNNVVYNTGWASFFQHYGANNTIINNVFA-----------RASLNPPPHPDDPKTDGDIHVGLAENHTSITFERNIVYDT------FQGTNHSAYLSDQDAIVFLNNNLYYNSNGAELLFGRQQISFTEWQKTGQDNGSIIADPLFVGDVNQCDFFTIQSNSPAAKLGF 692          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A2E2C5S5_9PLAN (Beta_helix domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C5S5_9PLAN)

HSP 1 Score: 189 bits (481), Expect = 1.370e-49
Identity = 139/414 (33.57%), Postives = 194/414 (46.86%), Query Frame = 1
Query:    1 MWAPVLTELLQVNG-------ASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVG-TDVSPGPTN----VLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPSNFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPLISDPFHLNFTLAPDSPAFKLGFQPIDVRVTGTQVNP 1206
            ++APV  +LL + G         ++ F  L+ +HT W    T     +    A    + + ++ G  I  T C++    +YG+W    G  D              GVR+G T ++         + + NN I  GG  FP    + + +S +  V  N++  F YTGISVGW W Y+D     N  + +NHIH LG G    +G    GVYTLG    T V+NN I  V ++  GG+GL  D+GS+DI   NN+V+ T      QHYG NN   NN+F               V+     D  S FTF RN+V     SG LF G +    +   H   NL+W +   GK ++ Q +         +D GSLIADP   DP + NF LA DSPAFK+GF+P D    G   +P
Sbjct:  273 VFAPVAEQLLLLKGDPAEGKFVEHLTFRGLSFQHTDW---RTPPQGFEPSQAASPIEAAVMVDGGRSIQFTDCEIGHVATYGLWFR-KGCRDSVVTHCDLHDLGAGGVRIGETRIASKEVERTEKIKVDNNLIRHGGRLFPCAVGVWIGQSGDNAVTHNEIADFYYTGISVGWRWGYSDSLAVRNK-IEFNHIHHLGWGWLSDMG----GVYTLGPSPGTTVSNNVIHDVLSWSYGGWGLYNDEGSTDILMENNLVYRTRSGGYHQHYGRNNLIRNNIFAFS--------REYQVKRSRVEDHLS-FTFERNIVAFD--SGDLFHGNWKDRNVKLNH---NLYWRTD--GKPIDFQGMTFAEWQAAGKDQGSLIADPRFIDPANDNFHLAQDSPAFKIGFKPFDYEKAGLYGDP 661          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A6C238_9PLAN (Beta_helix domain-containing protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A6C238_9PLAN)

HSP 1 Score: 185 bits (470), Expect = 4.290e-48
Identity = 134/409 (32.76%), Postives = 191/409 (46.70%), Query Frame = 1
Query:    1 MWAPVLTELLQVNG-------ASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTD-----VSPGPTNVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPSNFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPLISDPFHLNFTLAPDSPAFKLGFQPIDVRVTG 1191
            ++APV  +LL + G         ++ F  L+ +HT W    T     +    A    + + I+ G  I    C++    +YG+W    G  D              GVRVG +      +     +++ NN I  GG  FP    + + +S +  V  N++  F YTG+SVGW W Y+D     N  + +NHIH LG G    +G    GVYTLG    T V+NN I  V ++  GG+GL  D+GS+DI   NN+V+ T      QHYG NN   NN+F   F+       S         ++  +FTF  N+V     SG LF G +    +   H   NL+W S D  K ++ Q           +D GS+IA+P   DP + NF LA DSPAFK+GF+P D    G
Sbjct:  273 VFAPVAEQLLILKGDPAGGKFVEHLTFRGLSFQHTDW---RTPPQGFEPSQAASPIEAAVMIDGGRSIQFEDCEIGHVATYGLWFR-KGCRDSIVTHCDLHDLGAGGVRVGENRIAAKEAERTGKIMVDNNLIRHGGRLFPCAVGVWIGQSGDNTVTHNEIADFFYTGVSVGWRWGYSDSLAVRNK-IEFNHIHHLGWGWLSDMG----GVYTLGPSPGTTVSNNVIHDVLSWSYGGWGLYNDEGSTDIVMENNLVYRTRSGGYHQHYGRNNLIRNNIFA--FSREYQVKRSRV-------EEHLSFTFEHNIVAFN--SGELFHGNWKDKNVKVDH---NLYWRSDD--KPIDFQGKTFAEWQAAGKDQGSIIANPHFIDPANDNFQLAKDSPAFKIGFKPFDYEKAG 656          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A517VAG3_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VAG3_9PLAN)

HSP 1 Score: 181 bits (460), Expect = 9.740e-47
Identity = 136/409 (33.25%), Postives = 190/409 (46.45%), Query Frame = 1
Query:    1 MWAPVLTELLQVNG---ASNIV----FSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVG-----TDVSPGPTNVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPSNFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPLISDPFHLNFTLAPDSPAFKLGFQPIDVRVTG 1191
            ++APV  +LL + G   A N V    F  L+ +HT W    T     +    A    + + I+ G  +    C++    +YGIW    G  D              GVR+G     +  +     + + NN I  GG  FP    + + +S +  V  N++  F YTGISVGW W Y+D     N  + +NHIH LG G    +G    GVYTLG    T V+NN I  V ++  GG+GL  D+GS+DI   NN+V+ T      QHYG NN   NN+F       S        R     ++  +FTF  N+V     SG LF G +    +   H   NL+W + D  K ++ Q           +D GSLIA+P   DP + NF LA +SPAFK+GF+P D    G
Sbjct:  273 VFAPVAEQLLILKGDAAAGNFVEHLTFRGLSFQHTDW---RTPPQGFEPSQAASPIEAAVMIDGGRSLLFEDCEIGHVATYGIWFR-KGCRDSIVTHCDLHDLGAGGVRIGETRIASKAAERTEKIKVDNNLIRHGGRLFPCAVGVWIGQSGDNAVTHNEIADFYYTGISVGWRWGYSDSLAVRNE-IEFNHIHHLGWGWLSDMG----GVYTLGPSPGTTVSNNVIHDVLSWSYGGWGLYNDEGSTDILMENNLVYRTRSGGYHQHYGRNNLIRNNIFA-----YSREYQVKRSRV----EEHLSFTFAHNIVAFN--SGELFHGNWKDKNVKVDH---NLYWRTDD--KPIDFQGKTFAEWQATGKDQGSLIANPHFIDPANDNFQLAKNSPAFKIGFKPFDYEKAG 656          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A815TVE9_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A815TVE9_9BILA)

HSP 1 Score: 178 bits (452), Expect = 9.770e-47
Identity = 125/399 (31.33%), Postives = 198/399 (49.62%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPGPT---NVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPS--------------NFTFTRNVVVST----NTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPL-ISDPFHLNF-TLAPDSPAFKLGF 1164
            N    I+  ++A++H+AW  G T     D+Q+ ++ TT+ L+I   + I ++  +V+ +GSYG+W+     +D              G+R+G  ++P PT   ++ I +N ++ GG  FPSG  ++  ++ +V +  N +    YTG+S+GW W Y+ PS T ++ V  N+I++ G       G    G+YTLG+   TV+TNN I+ V++Y    +G+  D+GSS+I   NNVV++   A   QHYG NNT INN+F              S+  P  P  P               ++TFTRN+V  T    N S    D   ++     + F  N++++          Q  +        QD  S+IADPL + D     F T+  DSPA KLGF
Sbjct:  193 NPVEGIIIDNVAIQHSAWNIGRTQQ--ADYQAASFLTTAPLYIANATSIIISNVEVSHTGSYGVWIK-EATTDINIINSLITDTGAGGIRIGQMIAPVPTPTSSINIISNEVSYGGNVFPSGVGVISHRAIDVVIADNSIHHHRYTGVSIGWEWGYS-PSYTSHILVHGNYIYNTGQHILCDQG----GIYTLGIQPGTVITNNVIKNVFSYAAYMWGIYLDEGSSEIVVANNVVYNIGWAGLFQHYGANNTIINNVFA-----------RVSLIQPPQPGDPIPDGNLRIMLTENHLSWTFTRNIVYDTFQGSNHSAFTSDAPNVS-----VSFNNNVYYNPYGTPLLFGIQQTSLAEWQKTGQDNSSVIADPLFVGDVNQCEFFTVQSDSPAAKLGF 567          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A816DPJ2_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A816DPJ2_9BILA)

HSP 1 Score: 177 bits (450), Expect = 6.010e-46
Identity = 126/399 (31.58%), Postives = 204/399 (51.13%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPGPT---NVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQP--------------SNFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPK--QDAGSLIADPLISDPFHLN----FTLAPDSPAFKLGF 1164
            N  SNI+  ++A++H+AW    T     D Q+ A+  ++ L+I   + I ++  +++ +GSYGIW+   G ++              G+R+G  +SP PT   ++ I +N ++ GG  FPSG  I+  +++NV +  N +    Y+GIS+GW W YA  S T N+ +  N+I+++G       G    G+YTLG+   T+++ N I+ V++Y    +G+  D+G+S +   NN+V++T  AS  QHYG NNT INN+F             AS+  P+ PD                ++  F RN++  T   GA     Y+++      F  N++++    G SL   P   +     K  QD  S+IADPL     ++N    FT+  DSPA KLGF
Sbjct:  291 NPISNIIIDNVAIQHSAWNIDRTQQ--ADSQAAAFLNSAPLYIANATSIIISNIEISHTGSYGIWIK-EGTTNINIFNSLITDTGAGGIRIGQMISPVPTPTTSIKIISNEVSYGGNVFPSGVAIISHRANNVIIADNSIHHHRYSGISIGWEWGYAQ-SYTSNIIIQNNYIYNIGQHILCDQG----GIYTLGIQPGTIISGNVIKNVFSYAIFMWGIYLDEGTSQVVVSNNIVYNTGWASFFQHYGANNTIINNVFA-----------RASLNPPSHPDDDDPDGDIHISLAENHTSLIFIRNIIYDT-FQGAKHS-VYISNPNVIASFNDNVYYNP--YGSSLLFGPQQTSFIEWQKTGQDNNSIIADPLFIG--NVNQCDFFTIRSDSPAAKLGF 664          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A817RGR8_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817RGR8_9BILA)

HSP 1 Score: 177 bits (450), Expect = 6.190e-46
Identity = 124/397 (31.23%), Postives = 199/397 (50.13%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPGPT---NVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPS--------------NFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPLISDPFHLN----FTLAPDSPAFKLGF 1164
            N   NI+  ++A++H+AW  G T     D Q+ A+  ++ L+I   + I ++  +++ +GSYG+W+   G ++              G+R+G  +SP PT   ++ I +N ++ GG  FPSG  ++  ++ +V +  N +    YTGIS+GW W Y   S T N+ +  N+I+++G       G    G+YTLG+   T++T N I+ V++Y    +G+  D+G+S I   NNVV++T  AS  QHYG NNT INN+F             AS+  P+ PD  +              + TFTRN++  T   GA    Y  ++      F  N++++          Q  +        QD  S+IADPL     ++N    FT+  DSPA KLGF
Sbjct:  291 NPIENIIIDNVAIQHSAWNIGRTQQ--ADSQAAAFLNSAPLYIAHATSIVISNVEISHTGSYGVWIK-EGTTNVNIFNSLVTDTGAGGIRIGQMISPVPTPTTSIKIISNEVSYGGNIFPSGVAVISHRAIDVIIADNSIHHHRYTGISIGWEWGYQS-SYTSNILIQDNYIYNIGQHILCDQG----GIYTLGIQPGTIITGNVIKNVFSYAIYMWGIYLDEGTSQILVSNNVVYNTGWASFFQHYGANNTIINNVFA-----------RASLNPPSQPDDDNPDGDIHIGLAETHTSLTFTRNIIYDT-FQGANHSAYK-SELKVIAPFSNNVYYNPYGTTLLFGPQQTSFIEWQKTGQDNDSMIADPLFIG--NVNQCDFFTIQSDSPAAKLGF 664          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A819H2Q0_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819H2Q0_9BILA)

HSP 1 Score: 177 bits (449), Expect = 1.080e-45
Identity = 125/399 (31.33%), Postives = 204/399 (51.13%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPGPT---NVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQP--------------SNFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPK--QDAGSLIADPLISDPFHLN----FTLAPDSPAFKLGF 1164
            N  SNI+  ++A++H+AW    T     D Q+ A+  ++ L+I   + I ++  +++ +GSYGIW+   G ++              G+R+G  +SP PT   ++ I +N ++ GG  FPSG  ++  +++NV +  N +    Y+GIS+GW W YA  S T N+ +  N+I+++G       G    G+YTLG+   T+++ N I+ V++Y    +G+  D+G+S +   NN+V++T  AS  QHYG NNT INN+F             AS+  P+ PD                ++  F RN++  T   GA     Y+++      F  N++++    G SL   P   +     K  QD  S+IADPL     ++N    FT+  DSPA KLGF
Sbjct:  318 NPISNIIIDNVAIQHSAWNIDRTQQ--ADSQAAAFLNSAPLYIANATSIIISNIEISHTGSYGIWIK-EGTTNINIFNSLITDTGAGGIRIGQMISPVPTPTTSIKIISNEVSYGGNVFPSGVAVISHRANNVIIADNSIHHHRYSGISIGWEWGYAQ-SYTSNIIIQNNYIYNIGQHILCDQG----GIYTLGIQPGTIISGNVIKNVFSYAIFMWGIYLDEGTSQVVVSNNIVYNTGWASFFQHYGANNTIINNVFA-----------RASLNPPSHPDDDDPDGDIHISLAENHTSLIFIRNIIYDT-FQGAKHS-VYISNPNVIASFNDNVYYNP--YGSSLLFGPQQTSFIEWQKTGQDNNSIIADPLFIG--NVNQCDFFTIRSDSPAAKLGF 691          
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Match: A0A814HEG5_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A814HEG5_9BILA)

HSP 1 Score: 176 bits (445), Expect = 1.210e-45
Identity = 125/395 (31.65%), Postives = 199/395 (50.38%), Query Frame = 1
Query:   37 NGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTTSTLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDXXXXXXXXXXXXXXGVRVGTDVSPG--PTNVL-IANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVGFFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVYTLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGASQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPS--------------NFTFTRNVVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATHCSGPKQDAGSLIADPL-ISDPFHLNF-TLAPDSPAFKLGF 1164
            N  ++I+ +++A++H+AW  G T     D+Q+ ++  ++ L+I   + I ++  +V+ +GSYGIW+   G ++              G+R+G  ++P   PTN + I +N ++ GG  FPSG  +++ ++ +V +  N V    YTGISVGW W Y+ PS T N+ V  N+I++ G       G    G+YTLG+   T++TNN I+ V++Y    +G+  D+GSS+I   NNVV++       QHYG NNT INN+F              SV  P  P  P               ++TFTRN+V  T   G+    +        + F  N++++          Q           QD  S+IADPL + D    +F T+  +SPA KLGF
Sbjct:  210 NPVTDIIINNVAIQHSAWNIGRTQQ--ADYQAASFLNSAPLYIANATSIIISDVEVSHTGSYGIWIR-EGTTNINIINSLITDTGAGGIRIGQMIAPISIPTNSIHIISNKVSYGGNVFPSGVGVIIHRAVDVIIADNSVHHHRYTGISVGWEWGYS-PSYTSNIVVHGNYIYNTGQHILCDQG----GIYTLGIQPGTIITNNVIKNVFSYAAYMWGIYLDEGSSEIVVSNNVVYNIGWGGLFQHYGANNTIINNVFA-----------RTSVIQPPQPGDPIPDGDLRIMNTENHLSWTFTRNIVYDT-FQGSNHSAFKSDAANVSVSFSSNVYYNPYGTPLLFGIQQTPFVEWQKTGQDNDSVIADPLFVGDVNQCDFFTIQSNSPAAKLGF 584          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10344.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A9UUX2_MONBE7.700e-8252.08Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A815LBT1_9BILA3.940e-5033.58Hypothetical protein n=7 Tax=Adineta steineri TaxI... [more]
A0A2E2C5S5_9PLAN1.370e-4933.57Beta_helix domain-containing protein n=2 Tax=Planc... [more]
A6C238_9PLAN4.290e-4832.76Beta_helix domain-containing protein n=5 Tax=Planc... [more]
A0A517VAG3_9PLAN9.740e-4733.25Beta_helix domain-containing protein n=1 Tax=Gimes... [more]
A0A815TVE9_9BILA9.770e-4731.33Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
A0A816DPJ2_9BILA6.010e-4631.58Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A817RGR8_9BILA6.190e-4631.23Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 ... [more]
A0A819H2Q0_9BILA1.080e-4531.33Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 ... [more]
A0A814HEG5_9BILA1.210e-4531.65Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10344contigS-firma_F_contig10344:3662..5133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog344747.PM8797T_02844
PFAMsBeta_helix
Max annot lvl203682|Planctomycetes
Evalue7.04e-49
EggNOG OGsCOG3420@1|root,COG3420@2|Bacteria,2J2QH@203682|Planctomycetes
DescriptionRight handed beta helix region
COG categoryP
Hectar predicted targeting categoryother localisation
Exons5
Model size1224
Cds size1224
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10344.491.1prot_S-firma_F_contig10344.491.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10344 3662..5133 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815566.0300756-CDS-S-firma_F_contig10344:3661..38481622815566.0300756-CDS-S-firma_F_contig10344:3661..3848Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 3662..3848 -
1696949420.3929474-CDS-S-firma_F_contig10344:3661..38481696949420.3929474-CDS-S-firma_F_contig10344:3661..3848Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 3662..3848 -
1622815566.0400712-CDS-S-firma_F_contig10344:3932..41871622815566.0400712-CDS-S-firma_F_contig10344:3932..4187Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 3933..4187 -
1696949420.4028847-CDS-S-firma_F_contig10344:3932..41871696949420.4028847-CDS-S-firma_F_contig10344:3932..4187Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 3933..4187 -
1622815566.051855-CDS-S-firma_F_contig10344:4238..43951622815566.051855-CDS-S-firma_F_contig10344:4238..4395Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4239..4395 -
1696949420.4192557-CDS-S-firma_F_contig10344:4238..43951696949420.4192557-CDS-S-firma_F_contig10344:4238..4395Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4239..4395 -
1622815566.061415-CDS-S-firma_F_contig10344:4452..46171622815566.061415-CDS-S-firma_F_contig10344:4452..4617Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4453..4617 -
1696949420.4345593-CDS-S-firma_F_contig10344:4452..46171696949420.4345593-CDS-S-firma_F_contig10344:4452..4617Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4453..4617 -
1622815566.0729055-CDS-S-firma_F_contig10344:4673..51331622815566.0729055-CDS-S-firma_F_contig10344:4673..5133Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4674..5133 -
1696949420.4445543-CDS-S-firma_F_contig10344:4673..51331696949420.4445543-CDS-S-firma_F_contig10344:4673..5133Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10344 4674..5133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10344.491.1

>prot_S-firma_F_contig10344.491.1 ID=prot_S-firma_F_contig10344.491.1|Name=mRNA_S-firma_F_contig10344.491.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=408bp
MWAPVLTELLQVNGASNIVFSSLALRHTAWVCGSTSDDVCDHQSTAWQTT
STLHINAGSHISVTGCDVAASGSYGIWVNGTGVSDVSVTGCGIHDLGSGG
VRVGTDVSPGPTNVLIANNTIARGGLAFPSGTPILVQKSSNVQVLSNDVG
FFCYTGISVGWSWNYADPSGTGNVTVAYNHIHDLGSGTYRQLGDAMAGVY
TLGVLHNTVVTNNFIRGVYAYYTGGYGLSQDQGSSDITFRNNVVFSTTGA
SQTQHYGVNNTYINNMFIGGFNTSSTPLNSASVRAPAPPDQPSNFTFTRN
VVVSTNTSGALFDGYYLADGLHDLHFQGNLWWSSPDAGKSLETQPVNATH
CSGPKQDAGSLIADPLISDPFHLNFTLAPDSPAFKLGFQPIDVRVTGTQV
NPPPCPA*
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mRNA from alignment at S-firma_F_contig10344:3662..5133-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10344.491.1 ID=mRNA_S-firma_F_contig10344.491.1|Name=mRNA_S-firma_F_contig10344.491.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1472bp|location=Sequence derived from alignment at S-firma_F_contig10344:3662..5133- (Sphaerotrichia firma ET2_F female)
ATGTGGGCCCCCGTCCTCACCGAACTTCTCCAAGTCAACGGCGCCTCCAA CATTGTGTTCTCTTCCCTGGCCCTTCGCCACACGGCTTGGGTATGCGGCT CCACCTCCGACGACGTCTGCGACCACCAGTCCACAGCTTGGCAGACGACG TCCACCCTCCATATCAACGCCGGCTCCCACATTTCTGTGACAGGTTGCGA CGTTGCCGCCAGCGGCTCGTACGGAATCTGGGTGAACGGCACCGGCGTCT CCGACGTGTCTGTCACTGGCTGCGGCATCCACGACCTTGGCAGCGGTGGT GTGCGCGTCGGCACCGACGTGTCGCCTGGCCCAACCAACGTCCTCATCGC TAACAACACCATTGCCCGTGGGGGGCTGGCTTTCCCGTCGGGGACGCCCA TCCTGGTGCAAAAGTCCTCCAACGTGCAGGTGCTGTCCAACGACGTCGGC TTCTTTTGCTGTGCGTGGGTGGGTGGCGCCGCACCCCGTTGTTCTCACCC CCCTCCCTCTCCCCAGACACGGGTATTTCTGTGGGCTGGTCCTGGAACTA CGCGGACCCGTCTGGCACCGGCAACGTCACCGTGGCCTACAACCACATCC ATGACTTGGGATCAGGGACGTACCGCCAGCTTGGTGACGCCATGGCGGGT GTGTACACCCTTGGTGTGTTGCATAACACGGGTATGTGGTTTGCCGCTCA CCTGCCGTGCGACCCCGTGTGACCTACCCCCACCGAAGTCGTCACAAACA ACTTTATTCGCGGCGTGTACGCGTACTACACCGGCGGCTACGGCCTCTCC CAGGACCAGGGCTCCTCCGACATTACCTTCCGCAACAACGTTGTCTTCAG CACGACGGGGGCCTCCCAAACCCAACACTACGGCGTCAACAATACGTGCG TGTGCTGCCGTTTGGCTTTCGTGCCTGTGCTAAAGGCCTCTCTCAGGTAC ATCAACAACATGTTCATTGGTGGCTTCAACACGTCGTCCACCCCGTTGAA CAGCGCCAGCGTGCGGGCCCCCGCCCCCCCCGACCAGCCATCGAACTTTA CCTTCACACGCAACGTTGTTGTCTCCACCAACACCTCCGGGGCCCTGTTC GACGGCTACTACCTGGCGGACGGCCTCCACGACCTTCACTTTCAGGGCAA CCTGTGGTGGAGCTCCCCCGACGCCGGCAAGTCCCTGGAAACCCAACCCG TGTGGGGGGGCGACAAGCCCAACGGCAGCGGCACCCGCATCACCTTCTCC CAGTGGCAGCGGGGGTGCGGGACGTCCACCACCAGCAACGCCACGCACTG CAGCGGCCCCAAGCAGGACGCTGGCAGCCTGATTGCAGACCCCCTCATCT CCGACCCCTTCCACCTCAACTTCACCCTCGCCCCGGACTCCCCCGCGTTC AAACTGGGCTTCCAACCCATTGACGTGCGTGTGACGGGGACACAGGTGAA CCCCCCACCCTGCCCCGCGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10344:3662..5133-

>mRNA_S-firma_F_contig10344.491.1 ID=mRNA_S-firma_F_contig10344.491.1|Name=mRNA_S-firma_F_contig10344.491.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2448bp|location=Sequence derived from alignment at S-firma_F_contig10344:3662..5133- (Sphaerotrichia firma ET2_F female)
ATGTGGGCCCCCGTCCTCACCGAACTTCTCCAAGTCAACGGCGCCTCCAA
CATTGTGTTCTCTTCCCTGGCCCTTCGCCACACGGCTTGGGTATGCGGCT
CCACCTCCGACGACGTCTGCGACCACCAGTCCACAGCTTGGCAGACGACG
TCCACCCTCCATATCAACGCCGGCTCCCACATTTCTGTGACAGGTTGCGA
CGTTGCCGCCAGCGGCTCGTACGGAATCTGGGTGAACGGCACCGGCGTCT
CCGACGTGTCTGTCACTGGCTGCGGCATCCACGACCTTGGCAGCGGTGGT
GTGCGCGTCGGCACCGACGTGTCGCCTGGCCCAACCAACGTCCTCATCGC
TAACAACACCATTGCCCGTGGGGGGCTGGCTTTCCCGTCGGGGACGCCCA
TCCTGGTGCAAAAGTCCTCCAACGTGCAGGTGCTGTCCAACGACGTCGGC
TTCTTTTGCTATGTGGGCCCCCGTCCTCACCGAACTTCTCCAAGTCAACG
GCGCCTCCAACATTGTGTTCTCTTCCCTGGCCCTTCGCCACACGGCTTGG
GTATGCGGCTCCACCTCCGACGACGTCTGCGACCACCAGTCCACAGCTTG
GCAGACGACGTCCACCCTCCATATCAACGCCGGCTCCCACATTTCTGTGA
CAGGTTGCGACGTTGCCGCCAGCGGCTCGTACGGAATCTGGGTGAACGGC
ACCGGCGTCTCCGACGTGTCTGTCACTGGCTGCGGCATCCACGACCTTGG
CAGCGGTGGTGTGCGCGTCGGCACCGACGTGTCGCCTGGCCCAACCAACG
TCCTCATCGCTAACAACACCATTGCCCGTGGGGGGCTGGCTTTCCCGTCG
GGGACGCCCATCCTGGTGCAAAAGTCCTCCAACGTGCAGGTGCTGTCCAA
CGACGTCGGCTTCTTTTGCTACACGGGTATTTCTGTGGGCTGGTCCTGGA
ACTACGCGGACCCGTCTGGCACCGGCAACGTCACCGTGGCCTACAACCAC
ATCCATGACTTGGGATCAGGGACGTACCGCCAGCTTGGTGACGCCATGGC
GGGTGTGTACACCCTTGGTGTGTTGCATAACACGGACACGGGTATTTCTG
TGGGCTGGTCCTGGAACTACGCGGACCCGTCTGGCACCGGCAACGTCACC
GTGGCCTACAACCACATCCATGACTTGGGATCAGGGACGTACCGCCAGCT
TGGTGACGCCATGGCGGGTGTGTACACCCTTGGTGTGTTGCATAACACGG
TCGTCACAAACAACTTTATTCGCGGCGTGTACGCGTACTACACCGGCGGC
TACGGCCTCTCCCAGGACCAGGGCTCCTCCGACATTACCTTCCGCAACAA
CGTTGTCTTCAGCACGACGGGGGCCTCCCAAACCCAACACTACGGCGTCA
ACAATACTCGTCACAAACAACTTTATTCGCGGCGTGTACGCGTACTACAC
CGGCGGCTACGGCCTCTCCCAGGACCAGGGCTCCTCCGACATTACCTTCC
GCAACAACGTTGTCTTCAGCACGACGGGGGCCTCCCAAACCCAACACTAC
GGCGTCAACAATACGTACATCAACAACATGTTCATTGGTGGCTTCAACAC
GTCGTCCACCCCGTTGAACAGCGCCAGCGTGCGGGCCCCCGCCCCCCCCG
ACCAGCCATCGAACTTTACCTTCACACGCAACGTTGTTGTCTCCACCAAC
ACCTCCGGGGCCCTGTTCGACGGCTACTACCTGGCGGACGGCCTCCACGA
CCTTCACTTTCAGGGCAACCTGTGGTGGAGCTCCCCCGACGCCGGCAAGT
CCCTGGAAACCCAACCCGTGTACATCAACAACATGTTCATTGGTGGCTTC
AACACGTCGTCCACCCCGTTGAACAGCGCCAGCGTGCGGGCCCCCGCCCC
CCCCGACCAGCCATCGAACTTTACCTTCACACGCAACGTTGTTGTCTCCA
CCAACACCTCCGGGGCCCTGTTCGACGGCTACTACCTGGCGGACGGCCTC
CACGACCTTCACTTTCAGGGCAACCTGTGGTGGAGCTCCCCCGACGCCGG
CAAGTCCCTGGAAACCCAACCCGTCAACGCCACGCACTGCAGCGGCCCCA
AGCAGGACGCTGGCAGCCTGATTGCAGACCCCCTCATCTCCGACCCCTTC
CACCTCAACTTCACCCTCGCCCCGGACTCCCCCGCGTTCAAACTGGGCTT
CCAACCCATTGACGTGCGTGTGACGGGGACACAGGTGAACCCCCCACCCT
GCCCCGCGTGACAACGCCACGCACTGCAGCGGCCCCAAGCAGGACGCTGG
CAGCCTGATTGCAGACCCCCTCATCTCCGACCCCTTCCACCTCAACTTCA
CCCTCGCCCCGGACTCCCCCGCGTTCAAACTGGGCTTCCAACCCATTGAC
GTGCGTGTGACGGGGACACAGGTGAACCCCCCACCCTGCCCCGCGTGA
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