mRNA_S-firma_F_contig1034.485.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: D7FSF4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF4_ECTSI) HSP 1 Score: 885 bits (2288), Expect = 0.000e+0 Identity = 471/583 (80.79%), Postives = 499/583 (85.59%), Query Frame = 3
Query: 57 MLSALRSGRAFLPVAPGRASRQLSKSAGVRGVAALDVRSAAAAGCFRARY--------SEERTGRYGVEGIGMARGLTLSAT-MPSAADDVNPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGG 1778
MLSALRS RAFLP GRA R+LS GV SE R+G +RG+ SAT + +AA VNPTSRTSSTTLE+ITTGQF DLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAA RG GKGVSALIISPTRELAQQIA EAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDI+VATPGRLLDL+ENHGL RDM+ LD+L+FDEADQLLEMGFRPAIENILRNLQ SK RQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTH+HVPQKFA+VPMAEQIPRLLATILKA+EDPDHKIIVFFV AR+VQLHAELF MGV VLETHSRKSQ+ RTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSD+NQYVHRLGRTARAGKGGSGLLVL EAE+GFIREV DLPLE+D+RMDPGTM+EARQMVA AVHRVDPVTVSKAYQAWLGFYKG L+R+RWTP LV AN W VWGL SPPPLQA+T+GKMGLR V+GL +DR PQ PRGG
Sbjct: 1 MLSALRSSRAFLPSPAGRAGRKLSARGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAWAERHGALQAS-SRGILTSATRLSAAAGAVNPTSRTSSTTLEEITTGQFNDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAKRGFGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLVFDEADQLLEMGFRPAIENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARIVQLHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDTNQYVHRLGRTARAGKGGSGLLVLAEAEKGFIREVGDLPLEEDERMDPGTMIEARQMVAGAVHRVDPVTVSKAYQAWLGFYKGALRRLRWTPGTLVSSANSWAVDVWGLASPPPLQARTIGKMGLRDVDGLVIDRTPQEPRGG 582
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A6H5JHU6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU6_9PHAE) HSP 1 Score: 853 bits (2204), Expect = 7.300e-307 Identity = 443/512 (86.52%), Postives = 470/512 (91.80%), Query Frame = 3
Query: 252 ARGLTLSAT-MPSAADDVNPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAATRGNGKGVSALIISPTRELAQQIAAEAQQ--IMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGG 1778
+RG+ SAT + +AA VNP SRTSSTTLE+ITTGQF D++LSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAA RG GKGVSALIISPTRELAQQIA EAQQ IMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDI+VATPGRLLDLLENHGL R M+ LD+LIFDEADQLLEMGFRPAIENILRNLQ SKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTH+HVPQKFA+VPMAEQIPRLLATILKA+EDPDHKIIVFFV AR+ LHAELF MGV VLETHSRKSQ+ RTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSD+NQYVHRLGRTARAGKGGSGLLVL EAE+GFIREV DLPLE+D+RMDPGTM+EARQMVA AVHRVDPVT+SKAYQAWLGFYKG L+R+RWTP LV AN W VWGL SPPPLQA+T+GKMGLR V+GL +DR P PRGG
Sbjct: 11 SRGIIASATRLSAAAGAVNPASRTSSTTLEEITTGQFSDVNLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAKRGFGKGVSALIISPTRELAQQIAVEAQQACIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLLENHGLGRSMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTHMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDTNQYVHRLGRTARAGKGGSGLLVLAEAEKGFIREVGDLPLEEDERMDPGTMIEARQMVAGAVHRVDPVTISKAYQAWLGFYKGALRRLRWTPGTLVNSANSWAMDVWGLASPPPLQARTIGKMGLRDVDGLVIDRTPLEPRGG 520
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI) HSP 1 Score: 521 bits (1341), Expect = 1.030e-174 Identity = 278/484 (57.44%), Postives = 351/484 (72.52%), Query Frame = 3
Query: 303 NPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAT--RGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILK--AREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGL 1742
NP SRTS+TT+ Q+T +F L LS T AI++VLGYA +TKVQ SIP L G DVLAKAKTGTGKT++FL PAIE A R KG+ LIISPTRELAQQIA EA Q+++FH + L+C VGG N+ D+ PDI+VATPGRL D L+N+GL++DM L LIFDEADQLLEMGFRPAIE ILR + S+ RQTL+FSATMPGDV+ IA +A+K YE VDCVGEEE+TH+HVPQ++ + +Q+ L + + A + HKIIVFF TAR+ Q +AEL LMG PVLE HSRKSQ R +V+E FRNG+G +MFTSDVSARGMDYPDVS VIQVGLPSD QY+HRLGRTARAGK G G+L+L + E F+ +V DLP+++ D + ++ + V++A ++ ++V AYQAWLGFY G L+R+ W+ LV +AN+W+T + P +QAKT+GKMGLRGV G+
Sbjct: 128 NPNSRTSTTTMSQMTESKFAQLPLSAPTQRAIAEVLGYATLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLFPAIEGVARTPRAQRKGIWVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGVPGI 609
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE) HSP 1 Score: 517 bits (1331), Expect = 7.670e-174 Identity = 277/488 (56.76%), Postives = 350/488 (71.72%), Query Frame = 3
Query: 333 LEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAT--RGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILK--AREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGGEN 1784
+ Q+T +F L LS T AI++VLGY +TKVQ SIP L G DVLAKAKTGTGKT++FL+PAIE A R KG+S LIISPTRELAQQIA EA Q+++FH + L+C VGG N+ D+ PDI+VATPGRL D L+N+GL++DM L LIFDEADQLLEMGFRPAIE ILR + S+ RQTL+FSATMPGDV+ IA +A+K YE VDCVGEEE+TH+HVPQ++ + +Q+ L + + A + HKIIVFF TAR+ Q +AEL LMG PVLE HSRKSQ R +V+E FRNG+G +MFTSDVSARGMDYPDVS VIQVGLPSD QY+HRLGRTARAGK G G+L+L + E F+ +V DLP+++ D + ++ + V +A ++ ++V AYQAWLGFY G L+R+ W+ LV +AN+W+T + P +QAKT+GKMGLRGV G+ DR+P S GG N
Sbjct: 38 MSQMTESKFAQLPLSAPTQRAIAEVLGYVTLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLLPAIEGVARTPRAQRKGISVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDLPMQRRDPLPKASVAQITPAVNEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGVPGIVEDRSPPSG-GGRN 522
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA) HSP 1 Score: 498 bits (1281), Expect = 1.600e-167 Identity = 273/483 (56.52%), Postives = 335/483 (69.36%), Query Frame = 3
Query: 342 ITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERA--ATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPD--HKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGG 1778
+T+ +F L ++ + I+ +GY MTKVQ +IPV LTGVD+LAKAKTGTGKT+AFLIP +ERA + R G G+S LIISPTRELAQQI EA F ++L C GG N+ DL +L+ PDILVATPGRL D LEN L+R + L +L+ DEADQLLEMGFRPAIE LRNL A RQTL+FSATMP DV+AI+ IAM+P +E+VD VGEEE+THEHVPQ + M +P+LL + +A D D HKIIVFF TAR+ Q HAEL MG+PVLE HSRKSQS RT+V++ FRNG G IMFTSDV+ARGMDYPDV+ VIQVG+PSD QY+HRLGRTARAGKGG G+L+L + E F+REVSDLP+ +++ + V +A+ R+ T AYQA LGF LKR+ W + LV AN W V L PP L+AKTVGKMGL+GV GL + + GG
Sbjct: 1 MTSDRFESLPINADLKRGITQAMGYETMTKVQSATIPVSLTGVDILAKAKTGTGKTLAFLIPCVERALRSPRRAG-GISVLIISPTRELAQQIHDEAALATRFMGMRLQCIFGGTNIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLLEMGFRPAIEAALRNLPPPSA-RQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEESTHEHVPQSAVVTTMEHGVPQLLLLLRRAVHDADGAHKIIVFFTTARLTQFHAELCNAMGMPVLEIHSRKSQSQRTKVSDQFRNGSGLIMFTSDVTARGMDYPDVTSVIQVGIPSDKAQYIHRLGRTARAGKGGRGVLLLCDFEAAFLREVSDLPVVREEPAGDAQLQALLPRVNEAILRLPDTTKITAYQANLGFLNSNLKRLGWNKDQLVSVANDWACTVMNLSEPPALEAKTVGKMGLKGVAGLRISGRDGASGGG 481
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK) HSP 1 Score: 496 bits (1276), Expect = 1.250e-165 Identity = 273/496 (55.04%), Postives = 341/496 (68.75%), Query Frame = 3
Query: 300 VNPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIER------AATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENH-GLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAG--KGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAP 1760
VNP SRTSSTTL Q+T +F D L+ T A+++VLGY MT+VQ Q++PV L G DVLAKAKTGTGKT+ FL+PAIER AA RG VSAL+ISPTRELAQQIA EA+Q++ FH L L GG + +D++ N PDILVATPGRLLD LEN G L LI DE DQLL+MGFRP+I IL++L K+ RQTL+FSATMP DVQ +A + PSYE+VDCVG+E TH+ VPQ F + + +Q+ L I + R+ P HK+IVFF TAR+ Q +AE+F MGVPVLE HSRKSQ RT+V++ FR G G +MFTSDVSARGMDYPDV+ VIQVG+P+D QYVHRLGRTARAG +GG G+L+L E E+ ++R++SDLPL+ P + ++ A+ R+ T AYQAW+GFY L+R W+ E LV+ AN W+T V P LQAKT+GKMGL+ V GL P
Sbjct: 4 VNPNSRTSSTTLGQLTDVRFADAPLAVGTQRALAEVLGYERMTRVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPAIERILAAPAAARRGR---VSALVISPTRELAQQIAEEAKQLLKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLP-PKSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVPGHKLIVFFTTARLTQFYAEVFNFMGVPVLEIHSRKSQGHRTKVSDQFRTGNGLVMFTSDVSARGMDYPDVTGVIQVGMPADRAQYVHRLGRTARAGGREGGRGVLLLAEFERPYLRQLSDLPLQPRAPSPPEALAAQGPQLSAALARLSHATRGAAYQAWMGFYNSNLRRCNWSKEDLVRNANHWITAVCEAPEVPALQAKTIGKMGLKNVPGLIKSTEP 495
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A7S3XX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX82_HETAK) HSP 1 Score: 489 bits (1259), Expect = 1.930e-161 Identity = 269/497 (54.12%), Postives = 339/497 (68.21%), Query Frame = 3
Query: 300 VNPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIER------AATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENH--GLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAG--KGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAP 1760
+NP SRTSSTTL +T +F DL L T A+ +VLGY++MT VQ Q++PV L G DVLAKAKTGTGKT+ FL+P IE+ AA RG VSAL+ISPTRELAQQIA EA+Q++ FH L L VGG +++D L PDI+VATPGRL LL+ G L L+ DE DQLL+MGFRP+I ILR L KA RQ+L+FSAT+P DVQ IA + +KPSYE+VDCVGEEE+TH HVPQ + M Q+ L + + R+ P HKIIVFF TAR+ Q +AE+F MGVPVLE HSRKSQS RT+++E FR +G +MF+SDVSARGMDYPDV+ V+QVG+P+D QYVHRLGRTARAG +GG G+L+L E E+ ++R++SDLPL+ P + ++ A+ R+ T AYQAW+GFY L+R W+ E LV+ AN W+T V P LQAKT+GKMGL+ V GL P
Sbjct: 120 INPNSRTSSTTLGHLTEAKFTDLQLHAGTKRALKEVLGYSDMTHVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPTIEQVLAAPAAARRGR---VSALVISPTRELAQQIAEEAKQLLKFHDLGLQTVVGGTKMSKDAAALRRRTPDIVVATPGRLEALLDEDTAGFRGACAGLRVLVMDECDQLLDMGFRPSILRILRGLP-PKAGRQSLLFSATLPRDVQEIAGLGLKPSYELVDCVGEEESTHRHVPQSVLVCSMETQLAELAQIVEEGRQVPGHKIIVFFTTARLTQFYAEIFNFMGVPVLEMHSRKSQSARTKISEQFRTQQGVVMFSSDVSARGMDYPDVTQVVQVGMPADRAQYVHRLGRTARAGGREGGRGVLLLAEFERPYLRQLSDLPLQPRAPSPPEALAAQGPQLSAALARLSHATRGAAYQAWMGFYNSNLRRCNWSKEDLVRNANHWITAVCEAPEVPALQAKTIGKMGLKNVPGLIKSTEP 612
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A7S1J8E5_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8E5_9EUGL) HSP 1 Score: 473 bits (1216), Expect = 3.460e-157 Identity = 257/487 (52.77%), Postives = 335/487 (68.79%), Query Frame = 3
Query: 333 LEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHR-LKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKARE-DP-DHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAE-QGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGGE 1781
+ Q+T +F L L T A+++VL YA MTKVQ +++P+ L G D+LAKAKTGTGKT+AFLIPAIE A G+G+ LIISPTRELA QI EA+Q+++FH+ ++ + GG + RDL+ L + PD+LVATPGRL D LE+ G+ + L +LIFDEADQLLEMGFRPAIE +LR L K++R+TL+FSATMP DV+AIA A++ SY+ VDCVG E++TH+HVPQ + + EQ+ L+A + KA DP D KIIVFF TAR+ Q +AE+F G+P LE HSRKSQS RT+V++ FR G MFTSDVSARGMDYPDVS VIQVG+PSD QYVHR+GRTARAGK G G+L+L + E + F+ +V+DL + + M + + + + VDP T + YQA+LGFY LKR+RWT V AN W G PPP+ +TVGKMGL+ V GL + R + GG+
Sbjct: 1 MSQMTQDRFDALPLGAATKRALAEVLCYATMTKVQAETLPISLKGGDILAKAKTGTGKTLAFLIPAIEMMAQSARGQGILTLIISPTRELASQIEEEAKQLLTFHQGIRSLVVFGGTPIKRDLSALQT-PPDLLVATPGRLNDHLEHSGIQSKITKLQTLIFDEADQLLEMGFRPAIETMLRMLP-PKSTRRTLLFSATMPADVKAIAKFALRDSYDFVDCVGAEQSTHQHVPQTSVVCTLQEQLVNLIAQVQKAMAADPQDFKIIVFFTTARLTQFYAEVFNHAGIPTLEIHSRKSQSHRTKVSDKFREGSRLCMFTSDVSARGMDYPDVSAVIQVGMPSDRAQYVHRIGRTARAGKSGVGVLMLADFEARAFLPQVADLHIAPAPALTAAEMAQLEPLASKGLAAVDPQTCGQGYQAFLGFYNSNLKRLRWTAAECVAMANHWAVDCVGCPEPPPIDPQTVGKMGLKNVPGLNIQRRDRGDGGGQ 485
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A7S0YY46_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0YY46_9CRYP) HSP 1 Score: 468 bits (1204), Expect = 1.700e-155 Identity = 257/485 (52.99%), Postives = 329/485 (67.84%), Query Frame = 3
Query: 303 NPTSRTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHR-LKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPS--YEVVDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTV 1748
N SRTS+TT+ Q+TT F +L + T +I++V+ Y MT VQ+QSIPV LTGVD+LAKAKTGTGKT++FLIPA+E +G+S LIISPTRELAQQI EA+ ++ HR + +MC VGG N+NRD+ P +LVATPGRL D LEN GL++ L LIFDEADQLL+MGFRPAI +L+ L K +RQTL+FSATMP DV+ IA +AM+ + + VD VG EENTH+HV Q + + P L+ + + P +KII FF TAR QL++EL +G+PVLE HSRKSQS R +V+E FR G IMFTSDVSARGMDYPDVS VIQ G PSD QYVHRLGRTARAGK GSG+L+L + E F+R++ DLP++ + P V+ A R+ T+ +YQAW+GFY L+R+ W+ E LV +AN WV PP ++ KT+GKMGL+GV GL +
Sbjct: 25 NAISRTSATTMSQMTTSAFDELQVHPLTKKSIAEVMRYQTMTIVQQQSIPVALTGVDLLAKAKTGTGKTLSFLIPAVEHVIRDPPVRGISVLIISPTRELAQQIEEEAKMVVQMHRTITVMCIVGGTNMNRDIQGFKR-PPSLLVATPGRLNDHLENSGLAQLCSQLRCLIFDEADQLLDMGFRPAILTMLKFLP-PKDTRQTLLFSATMPKDVKTIADLAMRSAQNFAYVDTVGAEENTHQHVEQTYVVASKQGLAPELVTLVREGMMTPGYKIIAFFPTARQTQLYSELLAALGIPVLEIHSRKSQSQRNKVSEQFRMGNSLIMFTSDVSARGMDYPDVSRVIQCGAPSDRAQYVHRLGRTARAGKDGSGVLLLCDFESYFLRDLKDLPVKARANIPPEEEARLLPAVSQAFQRLPDGTICASYQAWMGFYNSFLRRLGWSKEDLVAQANDWVMGTLMRHEPPEMEKKTIGKMGLKGVPGLNI 507
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Match: A0A7S0QEX6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEX6_9CRYP) HSP 1 Score: 471 bits (1212), Expect = 1.100e-154 Identity = 264/490 (53.88%), Postives = 325/490 (66.33%), Query Frame = 3
Query: 315 RTSSTTLEQITTGQFRDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAATRGNGKGVSALIISPTRELAQQIAAEAQQIMSFHR-LKLMCSVGGVNVNRDLNQLNSGAPDILVATPGRLLDLLENHGLSRDMKTLDSLIFDEADQLLEMGFRPAIENILRNLQQSKASRQTLMFSATMPGDVQAIASIAMKPSYEV-VDCVGEEENTHEHVPQKFAIVPMAEQIPRLLATILKAREDPDHKIIVFFVTARMVQLHAELFILMGVPVLETHSRKSQSMRTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDSNQYVHRLGRTARAGKGGSGLLVLTEAEQGFIREVSDLPLEQDDRMDPGTMVEARQMVADAVHRVDPVTVSKAYQAWLGFYKGCLKRMRWTPEALVQEANFWVTQVWGLGSPPPLQAKTVGKMGLRGVEGLTVDRAPQSPRGG 1778
RTSSTT+ QIT +F +L ++ + A+++VL Y MT VQ SIP LTGVDVLAKAKTGTGKT+AFLIPA+E +G+ LIISPTRELAQQI EA Q+ +++ C VGG RDL PDILVATPGRL D LEN+GL R + L LI DEADQLL+MGFRPAI +LR L K +RQT++FSATMP DV+ IAS+A++ + +D VG+E+NTH+HV Q + +P L+ I + PD+K+IVFF TAR QL+AELF LMG PVLE HSR+SQ R +V+E FR G +MFTSDVSARGMDYPDV+ VIQVGLPSD QY+HRLGRTARAGK G+G+L+L E E F+++V DLPL+ + VA A+ V ++ AYQAWLGFY L+RM WT LV EAN W+T V PPL KTVGKMGL+G GL + R GG
Sbjct: 159 RTSSTTMSQITGNRFNELPINALSKRALAEVLRYEFMTLVQHASIPTSLTGVDVLAKAKTGTGKTLAFLIPAVEHILRAPKVQGICVLIISPTRELAQQIEEEANQLCKLQPGVRVQCIVGGTKPGRDLEGFRH-PPDILVATPGRLNDHLENNGLQRIVTQLRCLILDEADQLLDMGFRPAILQVLRCLP-PKETRQTMLFSATMPQDVKTIASLALRDKKQAFIDTVGKEDNTHQHVEQLAVVCTKEALLPELVMLIRDRMQTPDYKVIVFFTTARQTQLYAELFNLMGTPVLEIHSRRSQPQRNKVSEEFRTGARLVMFTSDVSARGMDYPDVTSVIQVGLPSDRAQYIHRLGRTARAGKDGAGVLLLCEFESFFLQDVKDLPLQTRPSQPLAALAPVMPAVARALASVSDGSLCTAYQAWLGFYNSSLRRMGWTKAELVAEANDWITAVMNRAEVPPLDPKTVGKMGLKGTPGLVIGRIESGGGGG 646 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1034.485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1034.485.1 >prot_S-firma_F_contig1034.485.1 ID=prot_S-firma_F_contig1034.485.1|Name=mRNA_S-firma_F_contig1034.485.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=675bp MANHWRVTAVLTMLSALRSGRAFLPVAPGRASRQLSKSAGVRGVAALDVRback to top mRNA from alignment at S-firma_F_contig1034:15985..22395+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1034.485.1 ID=mRNA_S-firma_F_contig1034.485.1|Name=mRNA_S-firma_F_contig1034.485.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6411bp|location=Sequence derived from alignment at S-firma_F_contig1034:15985..22395+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1034:15985..22395+ >mRNA_S-firma_F_contig1034.485.1 ID=mRNA_S-firma_F_contig1034.485.1|Name=mRNA_S-firma_F_contig1034.485.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4050bp|location=Sequence derived from alignment at S-firma_F_contig1034:15985..22395+ (Sphaerotrichia firma ET2_F female)back to top |