mRNA_S-firma_F_contig10322.469.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A1V9ZI01_9STRA (DAZ-associated protein 1-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZI01_9STRA) HSP 1 Score: 196 bits (499), Expect = 3.350e-56 Identity = 103/199 (51.76%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 13 KGKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPA-------SRTCNPPPSRARFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGRDDGG 588
+GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF D ++ L D H+LD + VEVK+AVPRDS A S + R E +K+FVGGLPPSV + F YF YG++TDA+VMMDR+T RSRGFGFVTF E VA V+ + H L+G+V+EIKRA+P+ E G GRG D G
Sbjct: 75 QGKIFVGGVSWETTEDNLRSHFGKYGNLTDAALMKDKYSGQPRGFGFVTFEDPSVIDRVLGDTHMLDGRNVEVKRAVPRDSQGARPQGGASSGYSDRFAGSGRTESKKIFVGGLPPSVTNDDFRTYFEDYGKITDAIVMMDRDTQRSRGFGFVTFEEEGAVAEVIS-KSHELHGKVVEIKRAEPKGEMRG-GRGGYDSG 271
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A6G0XAN2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAN2_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.620e-55 Identity = 101/202 (50.00%), Postives = 136/202 (67.33%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPSRARF-----------EQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGRDDGG 588
GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF D ++ L + H LD + VEVK+AVPRDS R+ P S + + E +K+FVGGLPP+V + F +YF +G++TDAVVMMDR+T RSRGFGFV+F E VA V+ + H L+G+V+EIKRA+P+ E G GRG D GG
Sbjct: 76 GKIFVGGVSWETTEDNLRAHFSQYGNLTDAALMKDKYSGQPRGFGFVTFEDPSVVDRVLNETHNLDGRNVEVKRAVPRDSMVGGRSGGPSTSGSGYSDGRSGGGRTIESKKIFVGGLPPTVTNEDFRSYFEDFGKITDAVVMMDRDTQRSRGFGFVSFEEEGAVAEVIS-KSHELHGKVVEIKRAEPKGEIRG-GRGYDMGG 275
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A6I9RZ10_ELAGV (heterogeneous nuclear ribonucleoprotein 1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RZ10_ELAGV) HSP 1 Score: 193 bits (491), Expect = 1.170e-54 Identity = 95/200 (47.50%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 1 LDEVKGKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPSRA--------RFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGR 576
+D +GK F+GG+SW+TTEE M+EYF +YGEV + V+MR K RPRGFGFV F D L+ L+D H +D + VE K+A+ R+ AS++ NP R F +K+FVGGLPP++ + F YF YG+VTD VVM D+ T R RGFGF++F+SE V VL H LNG+++E+KRA P+ G GR
Sbjct: 1 MDSDQGKLFIGGISWETTEEKMKEYFSKYGEVLQTVIMRDKTTGRPRGFGFVVFADPSILDRVLQDSHTIDGRTVEAKRALSREEQQASKSGNPAVGRTGGGHVSGGNFRTKKIFVGGLPPTLTEEAFRQYFQGYGDVTDVVVMYDQNTQRPRGFGFISFSSEDAVDRVLHKTFHELNGKLVEVKRALPKDANPSSGGGR 200
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A067DA27_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DA27_SAPPC) HSP 1 Score: 192 bits (487), Expect = 2.520e-54 Identity = 102/199 (51.26%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSA---PASRTCNPPPSR-----ARFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGRDDGG 588
GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF D +E L D H LD + VEVK+AVPRDS P + R E +K+FVGGLPPSV + F YF YG++TDA+VMMDR+T RSRGFGFV+F E VA V+ + H L+G+V+EIKRA+P+ E G GRG D G
Sbjct: 78 GKIFVGGVSWETTEDNLRSHFGKYGALTDAALMKDKYSGQPRGFGFVTFEDPSVIERVLSDTHTLDGRNVEVKRAVPRDSQGARPQGGSAGGYSDRYASGGRSTESKKIFVGGLPPSVTNDDFRTYFEDYGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVIS-KSHELHGKVVEIKRAEPKGEMRG-GRGGYDSG 274
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: F0WG76_9STRA (Uncharacterized protein AlNc14C88G5606 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG76_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.620e-54 Identity = 100/200 (50.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRD---SAPASRTCNPPPSRARF-----EQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGRDDGGR 591
GK F+GGVSW+TTEE++R++F +YG + + LM+ K +PRGFGFVTF D L+ L + H +D + VEVK+A+PRD S P+ + R E +K+FVGGLPPSV + F YF ++G +TDAVVM DRET RSRGFGFVTF E VA V+ + H L+G+V+EIKRA+P+ RSG G GGR
Sbjct: 102 GKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVIS-KTHELHGKVVEIKRAEPKEARSGGGYSGGYGGR 300
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: W4FGL9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGL9_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.500e-54 Identity = 98/197 (49.75%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPSRARF-----------EQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRG 573
GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF DA ++ L + H LD + VEVK+AVPRDSA E +K+FVGGLPPSV + F AYF +G++TDA+VMMDR+T RSRGFGFV+F E VA V+ + H L+G+V+EIKRA+P+ E G GRG
Sbjct: 89 GKIFVGGVSWETTEDNLRSHFGQYGALTDAALMKDKYSGQPRGFGFVTFEDASVVDRVLSETHTLDGRNVEVKRAVPRDSAGGGXXXXXXXXXXXXXXXXXXXGRPSESKKIFVGGLPPSVTNDDFRAYFEDFGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVIS-KSHELHGKVVEIKRAEPKGEVRGGGRG 284
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A6A4Y2G1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y2G1_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.670e-53 Identity = 96/201 (47.76%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPS-----------------RARFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFG 567
GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF D ++ L + H LD + VEVK+AVPRDS R R E +K+FVGGLPPSV + F AYF +G++TDA+VMMDR+T RSRGFGFV+F E VA V+ + H L+G+V+EIKRA+P+ E G G
Sbjct: 85 GKIFVGGVSWETTEDNLRSHFGQYGALTDAALMKDKYSGQPRGFGFVTFEDPSVVDRVLSETHNLDGRNVEVKRAVPRDSMVGGRASXXXXXXXXXXXXXXXXXXXXXXRGVTESKKIFVGGLPPSVSNDDFRAYFEDFGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVIS-KSHELHGKVVEIKRAEPKGEIRGGG 284
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A024TU51_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TU51_9STRA) HSP 1 Score: 189 bits (480), Expect = 4.760e-53 Identity = 99/199 (49.75%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 16 GKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPSRARF-------------EQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRG 573
GK FVGGVSW+TTE+++R +F +YG + + LM+ K +PRGFGFVTF DA ++ L + H LD + VEVK+AVPRDS R+ P S E +K+FVGGLPPSV + F AYF YG++TDA+VMMDR+T RSRGFGFV+F E VA V+ + H L+G+++EIKRA+P+ E GRG
Sbjct: 88 GKIFVGGVSWETTEDNLRSHFGQYGALTDAALMKDKYSGQPRGFGFVTFEDASVVDRVLSESHTLDGRNVEVKRAVPRDSIGGGRSG--PHSGGXXXXXXXXXXXXRPGESKKIFVGGLPPSVTNDDFRAYFEDYGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVMS-KNHELHGKLVEIKRAEPKGEVRSGGRG 283
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A1U8A5E9_NELNU (heterogeneous nuclear ribonucleoprotein 1 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A5E9_NELNU) HSP 1 Score: 189 bits (480), Expect = 5.080e-53 Identity = 96/201 (47.76%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 1 LDEVKGKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAPASRTCNPPPSR-----ARFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFGRGRDDGG 588
+D +GK FVGG+SWDT+EE ++EYF YGEV + V+MR K+ RPRGFGFV F D L+ L+D H +D + VE K+A+ R+ SR+ NP R + +K+FVGGLPP++ + F YF YG VTD VVM D+ T R RGFGF++F +E V VL H LNG+++E+KRA P+ G G GR GG
Sbjct: 1 MDSDQGKLFVGGISWDTSEEKLKEYFGNYGEVVQTVIMRDKVTGRPRGFGFVVFADPSILDRVLQDKHTIDGRTVEAKRALSREEQQTSRSGNPNAGRNLGGAGNIKTKKIFVGGLPPTLTEEGFRQYFETYGHVTDVVVMYDQTTQRPRGFGFISFDTEEAVDRVLHKTFHELNGKLVEVKRALPKEANPGSG-GRQMGG 200
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Match: A0A5B7B2D3_DAVIN (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B2D3_DAVIN) HSP 1 Score: 185 bits (469), Expect = 5.870e-53 Identity = 93/195 (47.69%), Postives = 128/195 (65.64%), Query Frame = 1
Query: 1 LDEVKGKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGFVTFVDAKTLENALRDVHVLDNKRVEVKKAVPRDSAP-ASRTCNPPPSR-----ARFEQRKLFVGGLPPSVDDPTFEAYFAQYGEVTDAVVMMDRETDRSRGFGFVTFASEATVAAVLEVQEHTLNGRVIEIKRAQPRAERSGFG 567
+D +GK F+GG+SWDTTEE +++YF +YGEV + V+MR KL ++PRGFGFV F D L+ L++ H++DN+ VE K+A+ R+ +SR N +R F +K+FVGGLPP+V + F YF YG VTD VVM D+ T+R RGFGF++F SE V VL H LNG+ +E+KRA P+ G G
Sbjct: 1 MDSDQGKLFIGGISWDTTEEILKDYFGQYGEVLQTVVMREKLTNKPRGFGFVVFADPSILDRVLQEDHIIDNRTVEAKRALSREEQQTSSRAGNTNSARNFGGGGNFRTKKIFVGGLPPTVTEEGFRQYFEAYGHVTDVVVMYDQTTNRPRGFGFISFESEDAVDRVLHKTFHDLNGKQVEVKRALPKDANPGGG 195 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10322.469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10322.469.1 >prot_S-firma_F_contig10322.469.1 ID=prot_S-firma_F_contig10322.469.1|Name=mRNA_S-firma_F_contig10322.469.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=311bp LDEVKGKAFVGGVSWDTTEESMREYFERYGEVKEVVLMRHKLDDRPRGFGback to top mRNA from alignment at S-firma_F_contig10322:2981..3939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10322.469.1 ID=mRNA_S-firma_F_contig10322.469.1|Name=mRNA_S-firma_F_contig10322.469.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=959bp|location=Sequence derived from alignment at S-firma_F_contig10322:2981..3939- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10322:2981..3939- >mRNA_S-firma_F_contig10322.469.1 ID=mRNA_S-firma_F_contig10322.469.1|Name=mRNA_S-firma_F_contig10322.469.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1866bp|location=Sequence derived from alignment at S-firma_F_contig10322:2981..3939- (Sphaerotrichia firma ET2_F female)back to top |