mRNA_S-firma_F_contig1029.428.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 449 bits (1154), Expect = 9.420e-149 Identity = 224/306 (73.20%), Postives = 252/306 (82.35%), Query Frame = 1
Query: 460 FAPSTDVFQENLPLEMLMDVAPLDRGGFCVVCSCTYLG-RRAVLKVPKLDGPDSAVADLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP------QCDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMYLARGGW 1356
F ST VFQ+NL L+ L D+ PLD GGFC+VCSCTY G +RAVLK+PK GP+SA ADLL EI IYKRIS RGGH NIA A G+GF + PFLVLE LEGG+LA A+E SR W D V RLPVALELADA+ +LH +A+P GF+LHRDLKPTNIGLCA+GHVK+FD GLSVVQEVR GN++QKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSF IVLWE+CTLRKPFAGMSV DHYREVITGGLRPPLDPRWP ALQHLLQACWHEDPD+RPSI EA++ L++++LA GGW
Sbjct: 40 FDSSTAVFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF---TSRGEPFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALP-GFILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGGGW 341
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.240e-118 Identity = 181/297 (60.94%), Postives = 226/297 (76.09%), Query Frame = 1
Query: 481 FQENLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDS----AVADLLMEINIYKRISERGGHHNIARAYGSGFHLVEGK--PTPFLVLELLEGGNLAKALERSRPQCDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMYLARGG 1353
F EN+ L L +V P +GGFCV+CSC Y G++AVLK+PK S A DLL EI+IY++IS RGGH NIARA+G+G H+ +G+ P+PFL+LE L+GG L A ERS WSDP+ RLPVA+ELA+A+ FLH A+P G VLHRDLKP+NIGLC GH+K+FDLGLSVV++V E + Y+MSGMAGSKRFM+PEVC GL YNEKVDVYSF +VLW++C LRKPFAGMS DHY +V+ GGLRPPLD RWP L HLLQACWH PD RP++++A++TLR+++ GG
Sbjct: 7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTA---VWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPT-RVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGGG 299
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 246 bits (629), Expect = 2.310e-70 Identity = 134/302 (44.37%), Postives = 184/302 (60.93%), Query Frame = 1
Query: 490 NLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVP--KLDGPDSAVADLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRPQCDTWSDPVP------------------RLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRM 1335
NL + L+ + + GG+C V +C G + +K+P P+ AVADL EI I KR+ H ++ YG+G EG+ PFLVLE L+ NLA+ QC T D RL L+L D + +LH E++P GFV+HRDLKP+NIG+ DG +K+FD GL+ ++E R+ D +Y M+G GS+RFM+PEV G+PYNEK D+YS+GIVLWELC L+KPFAGMS +H R+V G+RPPLD RWP L+ LL++CWH + ++RP +A ETL R+
Sbjct: 75 NLRFKDLVILEHIANGGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE-LPFLVLERLQYKNLAQ-------QCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTD-RYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARI 363
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 223 bits (567), Expect = 3.960e-61 Identity = 125/325 (38.46%), Postives = 173/325 (53.23%), Query Frame = 1
Query: 490 NLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLD--GPDSAVADLLMEINIYKRISERGGHHNIARAYGSGF---------------------HLVEGKPTPFLVLELLEGGNLAKALERSRPQCD------------TWSDPVPR-LPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMYLARGGW 1356
NL E L DV L GG C + + + GRR V+K+P+ D P+ A DL EI+I +R+ H NI G+GF + F++LE L GG L +++ P D W P + + AL+LA A+ +LH A+ FV+HRDLKP NI DG +KLFD GL+ + R G + Q+Y+M+G GS R+M PEV LPYNEK DVYSFG++LWE+ +LR+PF G++ + + VI GG RPPL W AAL+ L++ CW ED D RP E ++TL ++ W
Sbjct: 39 NLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQ----HPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQITHREATW 359
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 202 bits (515), Expect = 4.880e-54 Identity = 118/287 (41.11%), Postives = 165/287 (57.49%), Query Frame = 1
Query: 535 GGFCVVCSCTYLGRRAVLKVPKLDGPDSAVA--DLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----------------RSRPQCDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMY 1338
G C + S G + +K+P+ D + AVA DL +E+++ KR+S H +I G+G E KP FLVLE LE G LA L+ R++ D + V L ++ELA A+ LH+ +P F++HRDLKP N+G ADG +KLFD GL+ V + R ++ +Y+M+G GS R+M+PEV + LPYNEKVDVY+FG++LWE+ R+ F GM V D Y V+ G RP LD WP L+ L+ CWH D D+RP+ E LR +Y
Sbjct: 4 GAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVS----HKHILGLIGAGNR--EQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYM--VTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVK-RRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTLY 280
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.670e-53 Identity = 124/315 (39.37%), Postives = 175/315 (55.56%), Query Frame = 1
Query: 448 GGRVFAPSTDVFQENLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDSAVA--DLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRP--QCDTWSDPVPR-------------LPVALELADAMHFLHFEAVP-SGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMY 1338
GG+ S + E L ++ + G C + S Y G + V+K+P+ D D +A DL +E+ + + H +I + G+G L E P FLVLE LE G LA L P Q +T + + + L A+ELA+A+ +LH + FV+HRDLKP NIG ADG +KLFD GL+ + R ++ +Y M+G GS R+M+PEV + LPYNEKVDVY+FG++LWE+ R+ F GMSV D Y+ V+ GG+RPPLD WP AL+ L+ CWH D D+RP L+ +Y
Sbjct: 120 GGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLD----HRHIIKLLGAG--LREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVK-RRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 427
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 203 bits (516), Expect = 3.720e-52 Identity = 120/296 (40.54%), Postives = 168/296 (56.76%), Query Frame = 1
Query: 508 LMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDSAVA--DLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALE-----------------RSRPQCDTWSDPVPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRMY 1338
L V + G C + S G + +K+P+ D + AVA DL +E+++ KR+S H +I G+G E KP FLVLE LE G LA L+ R++ D + V L ++ELA A+ LH+ +P F++HRDLKP N+G ADG +KLFD GL+ V + R ++ +Y+M+G GS R+M+PEV + LPYNEKVDVY+FG++LWE+ R+ F GM V D Y V+ G RP LD WP L+ L+ CWH D D+RP+ E LR +Y
Sbjct: 208 LSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVS----HKHILGLIGAGNR--EQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYM--VTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVK-RRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRILY 493
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.370e-50 Identity = 113/286 (39.51%), Postives = 161/286 (56.29%), Query Frame = 1
Query: 508 LMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDSAVA--DLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAK-----ALERSRPQCDTWSDP---VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRM 1335
L +V L G C + + TY + V+K+ + D D+A+ +L +E+ + R++ + NI R G+G +P FL++E L+GG L++ R R + P + L ++AD + +LH EA+P VLHRD+KP NIG DG KL DLGL+ E DQ + M+G GS R+M+PEV + PYNEKVDV+S+G+VLWE+ TLRKP+ GM+ D Y V+ G +RPPL+ RWP LL ACW ED RPS + L+ M
Sbjct: 239 LSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLN----NENIVRLLGAGI-----EPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQ-DQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEM 514
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.630e-48 Identity = 116/284 (40.85%), Postives = 147/284 (51.76%), Query Frame = 1
Query: 484 QENLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDSAVADLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRPQCDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILE 1311
Q L L V L GG V + + G+ V+K K + D VA + EI I R H N+ G+G K F+VLE L+GG+L + L D W V L A +A AM + H +AVP VLHRDLKP NIG DG +K+FD GL+ + E D+KY MSG GS R+M+PEV + PYN K DVYSFG++LWE+ +KPFA D Y VI GG R + +WP L L+ ACWHE+PD RPS E
Sbjct: 195 QLTLKWRQLRHVEYLTDGGNSWVHTAIFNGKPVVVKTLKPECQDVVVA--INEIESEVAIHARLNHLNVVELIGAG---TTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSLRYMAPEVARSFPYNYKADVYSFGVILWEMNAGKKPFADYDRDTFYDSVIHGGERMKCNKKWPEELSDLITACWHENPDLRPSFAE 473
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.540e-48 Identity = 115/292 (39.38%), Postives = 158/292 (54.11%), Query Frame = 1
Query: 490 NLPLEMLMDVAPLDRGGFCVVCSCTYLGRRAVLKVPKLDGPDSAVA--DLLMEINIYKRISERGGHHNIARAYGSGFHLVEGKPTPFLVLELLEGGNLAKALERSRPQCDT----WSDP----VPRLPVALELADAMHFLHFEAVPSGFVLHRDLKPTNIGLCADGHVKLFDLGLSVVQEVREGNIDQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFGIVLWELCTLRKPFAGMSVDDHYREVITGGLRPPLDPRWPAALQHLLQACWHEDPDQRPSILEAKETLRRM 1335
NL L +V L GG + + GR V+K K + D AVA ++ +E++I+ ++ H NI G+G K F+VLE L+GG L + L D W V + A +ADA+++ H +A+P LHRDLKP NIG DG VKL D GL+ + + + + + Y MSG GS R+M+PEV K LPYN+K DVYSFGI+LWEL +KP+ GM+ D+ Y V+ G RPP++ +WP L L+Q CW D RPS E E L M
Sbjct: 362 NLKWAQLNNVEYLTDGGNNWIHTAVLNGRPVVVKTLKPECQDVAVAINEIELELDIHSKLD----HANICSLVGAG---TTSKGVRFIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKKQFAFVEVMRFARCIADALNYCHSQAIPGNMCLHRDLKPDNIGFTLDGKVKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAM 646 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1029.428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1029.428.1 >prot_S-firma_F_contig1029.428.1 ID=prot_S-firma_F_contig1029.428.1|Name=mRNA_S-firma_F_contig1029.428.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=407bp MGCADSRPTNHLGFDNNRAIKDDSAHTTSTNSSSEPSSSSTSTKKRLRAPback to top mRNA from alignment at S-firma_F_contig1029:20082..23875- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1029.428.1 ID=mRNA_S-firma_F_contig1029.428.1|Name=mRNA_S-firma_F_contig1029.428.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3794bp|location=Sequence derived from alignment at S-firma_F_contig1029:20082..23875- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1029:20082..23875- >mRNA_S-firma_F_contig1029.428.1 ID=mRNA_S-firma_F_contig1029.428.1|Name=mRNA_S-firma_F_contig1029.428.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2442bp|location=Sequence derived from alignment at S-firma_F_contig1029:20082..23875- (Sphaerotrichia firma ET2_F female)back to top |