mRNA_S-firma_F_contig10284.419.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10284.419.1
Unique NamemRNA_S-firma_F_contig10284.419.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A6H5KXD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD7_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 2.460e-186
Identity = 385/616 (62.50%), Postives = 413/616 (67.05%), Query Frame = 1
Query:  157 AILAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGD----AGPGGLSLYQQIALGVLAAFFRDESLVKKFLPVAPALVRALRAAHATTQTQGLCDALYCVQALGDVPGGMERLLRAGAAPAVVSRLSAESGDRAAAXXXXXXXXXXXXXADEGAPSGGVEESKAGGVEETKQAPAPAXXXXXXXXXXCPRSS----------------------------SPNGLGGVSSAGPAEDGGDGPAERAEALAFAFVGRALEASGGNCLGPRELTAVAEAFRDDPTTAKFGFMDLLLRWASLQEERGEAAVSVSADGVVAEWTRTGPFPAALREGLLQALHGAAADERRDSALALLALLLRAVGQEWAVEAD-EEGAEAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGASTGDXXXXXXXXXXXXXXQKARGAMGPAGADPSIGIAAEIAGANAXXXXXXXXXEEKGETRAEGGEGEDGERP--APRASLPAAELRAIKQQREARLLRMVPVGLGVAESTIAFLCG 1899
            A+LAQCLKLL+G SDEHKFAGLVMVTKHVPALTA    R  ++   S S G G+ LRQIC+AVGPAF+HRLLRTPGD+SSGGG GD       GGLS+YQQIALGVLAA F+DESLV KF+P APALVRALRAA A TQTQGLCDALYC QA+  VPGGM RLLRAGAAPAVVSRLSA SG+RAA              A+E    GG +                 XXXXXXXXXX                                  P G G    AG      +  AER+EALA AFVGRALEASGG CLG RELTA+AEAFRDDPT AKFGF+DLLLRWASL+EE   A      DG V  W R GPFPAALREGLLQALHGAA D+RRDSALALLA LLRAVGQ WAVE D EE    EGXXXXXXXXXXXXXXXXX                 RKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGA   D              QKARGAMGPAGADPSIGIAAEIA A A                 +GGE  +G+RP  APR  LPA++L+AIK+QR ARLLRMVPVGLGVAESTIAFLCG
Sbjct:   45 AVLAQCLKLLKGQSDEHKFAGLVMVTKHVPALTAYESVRADSSGSPSASAGGGE-LRQICNAVGPAFLHRLLRTPGDKSSGGGSGDDCGGGAVGGLSVYQQIALGVLAALFQDESLVPKFVPTAPALVRALRAADAATQTQGLCDALYCTQAIAGVPGGMARLLRAGAAPAVVSRLSAASGERAA-------------RANEERDFGGDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKGDGRGGPAGGDTPAAEAAAERSEALALAFVGRALEASGGGCLGSRELTAIAEAFRDDPTPAKFGFLDLLLRWASLREEES-APFPAGGDGGVGAWARDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQGWAVEEDGEEPGNGEGXXXXXXXXXXXXXXXXXKKKRVAK----------RKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGARASDGDEDAGPGTG----QKARGAMGPAGADPSIGIAAEIAAAKAA-------------ATGKGGEQGEGQRPSPAPRCPLPASQLKAIKEQRAARLLRMVPVGLGVAESTIAFLCG 618          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: D8LCF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF7_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 1.810e-184
Identity = 409/645 (63.41%), Postives = 442/645 (68.53%), Query Frame = 1
Query:   52 MVRVEEKESNGSSHDPSAP--------------GXXXXXXXXXXXXXXXAILAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGG-GGDAGP---GGLSLYQQIALGVLAAFFRDESLVKKFLPVAPALVRALRAAHATTQTQGLCDALYCVQALGDVPGGMERLLRAGAAPAVVSRLSAESGDRAAAXXXXXXXXXXXXXADEGAPSGGVEESKAGGVEETKQAPAPAXXXXXXXXXXCPRSSSPNGLGGVSSAGPAEDGGDGPA---------ERAEALAFAFVGRALEASGGNCLGPRELTAVAEAFRDDPTTAKFGFMDLLLRWASLQEERGEAAVSVSADGVVAEWTRTGPFPAALREGLLQALHGAAADERRDSALALLALLLRAVGQEWAVEADEEGAEAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGASTGDXXXXXXXXXXXXXXQKARGAMGPAGADPSIGIAAEIAGANAXXXXXXXXXEEKGETRAEGGEGEDGER--PAPRASLPAAELRAIKQQREARLLRMVPVGLGVAESTIAFLCG 1899
            MV+VEE +++ SSHD S P               XXXXXXXXXX     A+LAQCLKLL+G SDEHKFAGLVMVTKHVPALTAS   RT ++   S S G G+ LRQIC+AVGPAF+HRLLRTPGD+SSGGG GGD G    GGLS+YQQIALGVLAA F+DESLV KF+P+APALVRALRAA A TQTQGLCDALYC QA+  VP GMERLLRAGAAPAV SRLS  SG+RAA             X                            XXXXXXXXXX                 P +DG  GPA         ER+E LA AFVGRALEASGG CLG RELTAVAEAFRDDPT AKFGF+DLLLRWASL+E+   A      DG V  WTR GPFPAALREGLLQALHGAA D+RRDSALALLA LLRAVGQEWAVE D E A+      XXXXXXXXXXXXXXXXXXXXXXXX       RKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGA   D              QKARGAMGPAGADPSIGIAAEI  A A                  GG+  +G+R  PAPR+ LPA++L+AIK+QR ARLLRMVPVGLGVAESTIAFLCG
Sbjct:    1 MVQVEENQTS-SSHDGSPPLHPXXXXXXXXXXXXXXXXXXXXXXKPSASAVLAQCLKLLKGQSDEHKFAGLVMVTKHVPALTASESVRTVSSGSPSASAGGGE-LRQICNAVGPAFLHRLLRTPGDKSSGGGSGGDRGGAAVGGLSVYQQIALGVLAALFQDESLVPKFVPIAPALVRALRAADAATQTQGLCDALYCTQAIAGVPVGMERLLRAGAAPAVASRLSVASGERAARPNEEKDPGGDQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKDDGRGGPADGDTPAAAAERSEGLALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKFGFLDLLLRWASLREDEESAPFPAGGDGGVGAWTRDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEEDVEEADXX----XXXXXXXXXXXXXXXXXXXXXXXXKKNRVAKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGARASDGDEEAGPGTG----QKARGAMGPAGADPSIGIAAEITAAKAA-------------AAGAGGKQGEGQRLSPAPRSPLPASQLKAIKEQRAARLLRMVPVGLGVAESTIAFLCG 622          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A835ZIL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIL7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.030e-16
Identity = 106/327 (32.42%), Postives = 133/327 (40.67%), Query Frame = 1
Query:  946 EALAFAFVGRALEASGGNCLGPRELTAVAEAFRDDPTTAKF-GFMDLLLRWAS-LQEERGEAAVSVSADGVVAEWTRTG--PFPAALREGLLQALHGAAADERRDSALALLALLLRAVGQEWAVEADEEGAEAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGTFVAFAVRCAAGEVRILLDEALS-LFVPAAAR-GGASTGDXXXXXXXXXXXXXXQKARGAMGPAGADPSIGIAAEIAGANAXXXXXXXXXEEKGETRAEGGEGEDGERPAPRASLPAAELRAIKQQREARLLRMVPVGLGVAESTIAFLCGGEG 1908
            EA A   +   ++A+GG CLG  +L A+A  F  DP+ A+       LL WA+ L   RG +  S    G   +    G   F   +R GLL+ALHG+AA+  RD+AL LLA LLRA+G+ WAVE +  G                                        KRGTFV FA R A  EVRILLDEAL  L +P      G + G                 AR         P   +AA  A    XXXX                    G                  ++R AR  RM+PV LG+ ES + FLCG EG
Sbjct:  140 EAAALRCLECCVDATGGACLGAADLAALALVFARDPSGARSRDAARALLHWATALAAARGGS--SHGGGGAQRDHALEGGSEFAGLVRSGLLRALHGSAAEAARDAALTLLAALLRALGERWAVEGEGAGV---------------------------------------KRGTFVRFAARAAGNEVRILLDEALGVLLLPDTTPIEGKAQGPWRGVPQSEEALLDANTAR---------PPDPLAAAAAXXXXXXXXTPA-----------------GPXXXXXXXXXXXXXXXXXEKRAARAERMLPVALGILESAVQFLCGDEG 399          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A7S1CCT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCT1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.800e-11
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQ-ICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPGGLSLYQQIALGVLAAFFRDESLVKKFLPVAPALVRALR 540
            L +CLKLLRG++DE +FAGL+MV  H+P   AS + RT           +G  LR+ I  A+G  F+ RLL+          GGD+  G    +  +AL ++A F  D ++  KF    P  +R  R
Sbjct:   16 LQECLKLLRGSTDEERFAGLLMVATHIPPP-ASGDART-----------EGAALRRTIFDAIGATFLKRLLK----------GGDSEKGDAPAHVGLALNLIATFVDDHAIAAKFRGAVPVFLRVAR 120          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: W4H0I0_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0I0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.610e-9
Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAV----GPAFVHRLLRTPGDQSSGGGGGDA---GPGGLSLYQQIALGVLAAFFRDESLVKKFLPVA--PALVRALRAAHATTQTQGLCDALYCVQAL 603
            LAQCL +L G SDEHKFAGL+MVTKH+                      D   L++I  AV    G +F  RLL T G    GG G +A   G G +S +Q +AL ++++F +D SL ++F   A    ++  L  A +TT T  L D +  +  L
Sbjct:   15 LAQCLAILAGKSDEHKFAGLLMVTKHLQTE-------------------DESALQRIRKAVMDTAGISFFVRLLHTQG----GGDGDNAAADGDGDISPFQALALNLISSFCQDISLAREFATTAVVSVVLDVLPTAVSTTNTVVLQDCVQIIHGL 147          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A6A5AV52_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AV52_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.690e-7
Identity = 52/154 (33.77%), Postives = 73/154 (47.40%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAV----GPAFVHRLLRTPGDQSSGGGGGDAGPGG-LSLYQQIALGVLAAFFRDESLVKKFLPVA--PALVRALRAAHATTQTQGLCDALYCVQAL 603
            LAQCL +L G SDEHKFAGL+MVTKH+                      D   L++I  AV    G +F  RLL T G  S             +S +Q +AL ++++F +D SL ++F   A    ++  L  A +TT T  L D +  +  L
Sbjct:   15 LAQCLAILAGKSDEHKFAGLLMVTKHLQTE-------------------DESALQRIRKAVMDTAGISFFVRLLHTQGGGSXXXXXXXXXXXXDISPFQALALNLISSFCQDISLAREFATTAVVSVVLDVLPTAVSTTNTVVLQDCVQIIHGL 149          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A2D4BG86_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG86_PYTIN)

HSP 1 Score: 59.7 bits (143), Expect = 5.640e-7
Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPGGLSLYQQIALGVLAAFFRDESLVKKF 504
            + QCL++L G SDEHKFAGL+M+TK                +D SP      +L Q+  A+G AF  R L+T G +S           GLS +Q + L ++A+F  D +L  +F
Sbjct:   19 IEQCLRMLGGKSDEHKFAGLLMITKL---------------SDVSPERMXRLRL-QVLEAIGTAFFLRXLQTRGAESD---------DGLSSFQSLGLNLIASFCDDPTLAPQF 107          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A1S4BVW8_TOBAC (neurochondrin-like isoform X1 n=11 Tax=Nicotiana TaxID=4085 RepID=A0A1S4BVW8_TOBAC)

HSP 1 Score: 63.9 bits (154), Expect = 6.830e-7
Identity = 60/178 (33.71%), Postives = 81/178 (45.51%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPG-GLSLYQQIALGVLAAFFR------DESLVKKFLPVAPALVRALRAAHATTQTQGLCDALYCVQALGDVPGGMERLLRAGAAPAVVSRLS 675
            L  CLKLLRG  DE + AGL++VTK               N D      D   +R +  AVGP F+HRLLRT      G G G   PG     Y Q+++ VLAAF R       E +V K     P +V  + A   +   +   + L+ V A  +   G++ L  +G    V SR+S
Sbjct:   26 LDDCLKLLRGERDEQRLAGLLLVTKFC-------------NKD------DHAAIRMVYDAVGPQFLHRLLRT------GTGKGSDRPGDNRDAYLQLSITVLAAFCRVPEIAASEDMVTKI----PLIVEIMSAKAGSPIIEECYEFLFLVSAANEE--GVKTLYDSGGLHVVASRMS 172          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: A0A2D4CCR4_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCR4_PYTIN)

HSP 1 Score: 62.8 bits (151), Expect = 2.060e-6
Identity = 54/176 (30.68%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  163 LAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPGGLSLYQQIALGVLAAFFRDESLVKKFLPVAPALVRALR------AAHATTQTQGLCDALYCVQALGDVPGGMERLLRAGAAPAVVSRL 672
            + QCL++L G SDEHKFAGL+M+TK                +D SP      +L Q+  A+G AF  RLL+T G +S           GLS +Q + L ++A+F  D +L  +F     A  R +R      A      +  L D ++ ++ + D   G++     G    V+S L
Sbjct:  660 IEQCLRMLGGKSDEHKFAGLLMITKL---------------SDVSPERMQRLRL-QVLEAIGTAFFLRLLQTRGAESD---------DGLSSFQSLGLNLIASFCDDPTLAPQF-----AHERVIRFALDQLALFVEPPSPALHDCVHILRGIADSDKGVKLFFHEGTLGRVLSTL 805          
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Match: T0S6M9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6M9_SAPDV)

HSP 1 Score: 61.6 bits (148), Expect = 3.490e-6
Identity = 52/176 (29.55%), Postives = 76/176 (43.18%), Query Frame = 1
Query:  157 AILAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSPSGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPGGLSLYQQIALGVLAAFFRDESLVKKFLP--VAPALVRALRAAHATTQTQGLCDALYCVQALG-DVPGGMERLLRAGAAPAVVSRLS 675
            A L QCL +L G +DEHKFAGL+MVTKH+    A+                      ++ +  G  F  RLL T G               LS Y+ +AL ++++F  D +L  +F    V    + AL+   A      + D  + +Q L      G E L+  G  PAVV  ++
Sbjct:    6 AKLDQCLAVLAGPTDEHKFAGLLMVTKHLADADATTLQAV---------------RARVLATTGVVFFLRLLHTKGSDDE----------ALSPYRALALNLISSFCGDATLANEFAKASVVADTLEALQLGVAAANVTVVTDCHHVLQGLYLHTSSGRELLIENGLVPAVVQAMA 156          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10284.419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KXD7_9PHAE2.460e-18662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCF7_ECTSI1.810e-18463.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZIL7_9STRA8.030e-1632.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1CCT1_9STRA6.800e-1136.22Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W4H0I0_9STRA4.610e-936.54Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A6A5AV52_9STRA2.690e-733.77Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A2D4BG86_PYTIN5.640e-735.96Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1S4BVW8_TOBAC6.830e-733.71neurochondrin-like isoform X1 n=11 Tax=Nicotiana T... [more]
A0A2D4CCR4_PYTIN2.060e-630.68Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
T0S6M9_SAPDV3.490e-629.55Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10284contigS-firma_F_contig10284:2086..4415 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LCF7
PFAMsNeurochondrin
Max annot lvl2759|Eukaryota
Evalue2.96e-185
EggNOG OGs2EY0B@1|root,2SZK0@2759|Eukaryota
DescriptionNeurochondrin
COG categoryS
Hectar predicted targeting categoryother localisation
Exons2
Model size1936
Cds size1935
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815558.8919885-CDS-S-firma_F_contig10284:2085..25771622815558.8919885-CDS-S-firma_F_contig10284:2085..2577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10284 2086..2577 +
1696949415.0214436-CDS-S-firma_F_contig10284:2085..25771696949415.0214436-CDS-S-firma_F_contig10284:2085..2577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10284 2086..2577 +
1622815558.9038432-CDS-S-firma_F_contig10284:2972..44151622815558.9038432-CDS-S-firma_F_contig10284:2972..4415Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10284 2973..4415 +
1696949415.0411267-CDS-S-firma_F_contig10284:2972..44151696949415.0411267-CDS-S-firma_F_contig10284:2972..4415Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10284 2973..4415 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10284.419.1prot_S-firma_F_contig10284.419.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10284 2086..4415 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10284.419.1

>prot_S-firma_F_contig10284.419.1 ID=prot_S-firma_F_contig10284.419.1|Name=mRNA_S-firma_F_contig10284.419.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=645bp
HVCCSVSAVCALREQRAMVRVEEKESNGSSHDPSAPGGGISPPPPPPSAS
SSAILAQCLKLLRGTSDEHKFAGLVMVTKHVPALTASNEGRTSNNTDSSP
SGGDGDQLRQICSAVGPAFVHRLLRTPGDQSSGGGGGDAGPGGLSLYQQI
ALGVLAAFFRDESLVKKFLPVAPALVRALRAAHATTQTQGLCDALYCVQA
LGDVPGGMERLLRAGAAPAVVSRLSAESGDRAAAAAAAVAKAKAKAKADE
GAPSGGVEESKAGGVEETKQAPAPAAAAAAVAAPACPRSSSPNGLGGVSS
AGPAEDGGDGPAERAEALAFAFVGRALEASGGNCLGPRELTAVAEAFRDD
PTTAKFGFMDLLLRWASLQEERGEAAVSVSADGVVAEWTRTGPFPAALRE
GLLQALHGAAADERRDSALALLALLLRAVGQEWAVEADEEGAEAEGGGLA
GGGAGGGGSSGGGGASNGVKKKKKGGGATRRKRGTFVAFAVRCAAGEVRI
LLDEALSLFVPAAARGGASTGDGDGDGDDEAGPGTGQKARGAMGPAGADP
SIGIAAEIAGANAAAAVAAAAAEEKGETRAEGGEGEDGERPAPRASLPAA
ELRAIKQQREARLLRMVPVGLGVAESTIAFLCGGEGAAEEGEEGG
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mRNA from alignment at S-firma_F_contig10284:2086..4415+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10284.419.1 ID=mRNA_S-firma_F_contig10284.419.1|Name=mRNA_S-firma_F_contig10284.419.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2330bp|location=Sequence derived from alignment at S-firma_F_contig10284:2086..4415+ (Sphaerotrichia firma ET2_F female)
CACGTTTGCTGCAGTGTTTCTGCTGTTTGTGCTCTGCGAGAGCAGAGAGC GATGGTCCGCGTGGAAGAGAAAGAAAGCAACGGAAGCAGCCATGATCCCT CTGCTCCGGGAGGAGGAATATCCCCACCACCACCACCTCCATCCGCATCA TCATCCGCCATCCTTGCGCAGTGCCTCAAGCTGCTGAGAGGCACGTCCGA CGAGCACAAGTTCGCGGGGCTGGTGATGGTCACCAAGCACGTGCCAGCGC TCACTGCTTCCAACGAGGGAAGAACCAGCAACAACACTGACTCCTCTCCG AGCGGTGGCGATGGCGATCAGCTGCGACAGATCTGCAGCGCCGTTGGGCC TGCTTTCGTGCATCGCCTGCTCAGGACGCCCGGAGACCAGAGCAGCGGCG GCGGCGGTGGTGACGCTGGCCCGGGGGGGCTGTCGTTGTACCAGCAGATC GCGCTAGGCGTGCTGGCGGCCTTCTTCCGGGACGAGAGCTTGGTGAGCTT GTTTGTTTCGTAGACTAGCGCGCTTTTGTGCTCCCTCCGGCCGGCGCCTT TGCTGACCACCCGAGCCTGCAAAGGCGGCGGTGGGAGCAGAAACCTAAAG AGATGAGAGCGTGCCGGCTCTTTTTCTGCGAGTGCCGCGTGCTCGCTATC CCAGAAATGACCCTCTGCATGCATCTACCAGAGATTACATACAATTTGCA AAAAACGGTTGTGCATAACCGAGAGCCCGAACGGTATTATCTACATGCGG ATCTGTGCCCTTGCCCCTCGCCCTCCCCTGGATTTAAAATTTTGAAAATT CAAAATCTCCCGCAGAGATCCCACCAAAATCAAAACTCTCTTAACCCTTT TTTTACCACACACACCAATGCACGCCCCGCACACCAGGTCAAGAAATTCC TCCCCGTTGCTCCGGCCCTGGTGCGAGCCCTCCGCGCGGCCCACGCGACA ACCCAGACCCAGGGGCTCTGCGACGCGCTCTACTGCGTCCAGGCGCTGGG CGACGTCCCCGGCGGCATGGAAAGACTGCTGAGAGCCGGCGCCGCCCCGG CCGTCGTGAGCCGCCTCTCGGCCGAAAGCGGGGACAGGGCGGCGGCGGCG GCGGCGGCGGTGGCGAAGGCGAAGGCGAAGGCGAAGGCGGACGAGGGCGC ACCCAGCGGCGGTGTGGAAGAGAGCAAGGCGGGGGGGGTCGAAGAAACCA AGCAGGCACCAGCCCCTGCCGCCGCCGCCGCAGCAGTAGCAGCACCGGCC TGTCCTCGTTCTTCTTCGCCAAACGGACTCGGCGGCGTGAGCAGTGCCGG GCCGGCCGAAGACGGCGGTGACGGCCCAGCGGAACGAGCGGAGGCCCTCG CGTTCGCGTTCGTCGGGCGCGCGCTGGAAGCGTCGGGCGGCAACTGTCTG GGCCCGCGGGAGCTCACGGCCGTCGCCGAGGCGTTCCGAGACGACCCGAC CACGGCAAAGTTCGGCTTCATGGACCTCCTGCTGCGGTGGGCCTCCCTCC AAGAGGAACGGGGAGAAGCGGCGGTGTCGGTGTCCGCGGACGGGGTGGTG GCGGAGTGGACCAGGACCGGCCCGTTCCCGGCGGCCCTGCGGGAGGGGCT GCTGCAGGCGCTGCACGGCGCCGCCGCCGACGAGCGGCGGGACTCGGCGC TGGCGCTGCTCGCGTTGCTGCTGCGAGCGGTGGGGCAGGAGTGGGCGGTG GAGGCAGACGAAGAAGGGGCGGAAGCGGAAGGAGGAGGTCTCGCCGGAGG TGGGGCCGGCGGCGGCGGCAGCAGCGGTGGTGGTGGTGCTTCTAACGGCG TGAAGAAGAAGAAGAAGGGGGGCGGGGCGACGAGGAGAAAGCGGGGGACC TTCGTGGCGTTCGCGGTGAGGTGCGCCGCGGGCGAGGTCCGCATCCTGCT GGACGAGGCGTTGTCGCTGTTCGTGCCGGCGGCGGCGAGGGGCGGGGCGT CGACCGGGGACGGGGACGGAGACGGAGACGACGAGGCTGGCCCAGGGACC GGGCAGAAGGCGCGGGGGGCGATGGGCCCTGCGGGGGCGGATCCCTCGAT AGGAATCGCGGCGGAGATCGCGGGCGCCAATGCGGCGGCGGCGGTGGCGG CTGCGGCTGCTGAAGAGAAAGGCGAGACAAGAGCCGAGGGAGGGGAAGGG GAAGACGGAGAACGCCCTGCGCCCCGAGCTTCCCTGCCCGCCGCGGAGCT CAGGGCGATCAAGCAGCAGCGCGAGGCTAGGCTGCTGCGCATGGTGCCCG TCGGCCTTGGGGTCGCCGAGTCGACCATTGCGTTCCTTTGTGGCGGGGAA GGCGCGGCGGAGGAGGGCGAAGAAGGGGGC
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Coding sequence (CDS) from alignment at S-firma_F_contig10284:2086..4415+

>mRNA_S-firma_F_contig10284.419.1 ID=mRNA_S-firma_F_contig10284.419.1|Name=mRNA_S-firma_F_contig10284.419.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3870bp|location=Sequence derived from alignment at S-firma_F_contig10284:2086..4415+ (Sphaerotrichia firma ET2_F female)
CACGTTTGCTGCAGTGTTTCTGCTGTTTGTGCTCTGCGAGAGCAGAGAGC
GATGGTCCGCGTGGAAGAGAAAGAAAGCAACGGAAGCAGCCATGATCCCT
CTGCTCCGGGAGGAGGAATATCCCCACCACCACCACCTCCATCCGCATCA
TCATCCGCCATCCTTGCGCAGTGCCTCAAGCTGCTGAGAGGCACGTCCGA
CGAGCACAAGTTCGCGGGGCTGGTGATGGTCACCAAGCACGTGCCAGCGC
TCACTGCTTCCAACGAGGGAAGAACCAGCAACAACACTGACTCCTCTCCG
AGCGGTGGCGATGGCGATCAGCTGCGACAGATCTGCAGCGCCGTTGGGCC
TGCTTTCGTGCATCGCCTGCTCAGGACGCCCGGAGACCAGAGCAGCGGCG
GCGGCGGTGGTGACGCTGGCCCGGGGGGGCTGTCGTTGTACCAGCAGATC
GCGCTAGGCGTGCTGGCGGCCTTCTTCCGGGACGAGAGCTTGCACGTTTG
CTGCAGTGTTTCTGCTGTTTGTGCTCTGCGAGAGCAGAGAGCGATGGTCC
GCGTGGAAGAGAAAGAAAGCAACGGAAGCAGCCATGATCCCTCTGCTCCG
GGAGGAGGAATATCCCCACCACCACCACCTCCATCCGCATCATCATCCGC
CATCCTTGCGCAGTGCCTCAAGCTGCTGAGAGGCACGTCCGACGAGCACA
AGTTCGCGGGGCTGGTGATGGTCACCAAGCACGTGCCAGCGCTCACTGCT
TCCAACGAGGGAAGAACCAGCAACAACACTGACTCCTCTCCGAGCGGTGG
CGATGGCGATCAGCTGCGACAGATCTGCAGCGCCGTTGGGCCTGCTTTCG
TGCATCGCCTGCTCAGGACGCCCGGAGACCAGAGCAGCGGCGGCGGCGGT
GGTGACGCTGGCCCGGGGGGGCTGTCGTTGTACCAGCAGATCGCGCTAGG
CGTGCTGGCGGCCTTCTTCCGGGACGAGAGCTTGGTCAAGAAATTCCTCC
CCGTTGCTCCGGCCCTGGTGCGAGCCCTCCGCGCGGCCCACGCGACAACC
CAGACCCAGGGGCTCTGCGACGCGCTCTACTGCGTCCAGGCGCTGGGCGA
CGTCCCCGGCGGCATGGAAAGACTGCTGAGAGCCGGCGCCGCCCCGGCCG
TCGTGAGCCGCCTCTCGGCCGAAAGCGGGGACAGGGCGGCGGCGGCGGCG
GCGGCGGTGGCGAAGGCGAAGGCGAAGGCGAAGGCGGACGAGGGCGCACC
CAGCGGCGGTGTGGAAGAGAGCAAGGCGGGGGGGGTCGAAGAAACCAAGC
AGGCACCAGCCCCTGCCGCCGCCGCCGCAGCAGTAGCAGCACCGGCCTGT
CCTCGTTCTTCTTCGCCAAACGGACTCGGCGGCGTGAGCAGTGCCGGGCC
GGCCGAAGACGGCGGTGACGGCCCAGCGGAACGAGCGGAGGCCCTCGCGT
TCGCGTTCGTCGGGCGCGCGCTGGAAGCGTCGGGCGGCAACTGTCTGGGC
CCGCGGGAGCTCACGGCCGTCGCCGAGGCGTTCCGAGACGACCCGACCAC
GGCAAAGTTCGGCTTCATGGACCTCCTGCTGCGGTGGGCCTCCCTCCAAG
AGGAACGGGGAGAAGCGGCGGTGTCGGTGTCCGCGGACGGGGTGGTGGCG
GAGTGGACCAGGACCGGCCCGTTCCCGGCGGCCCTGCGGGAGGGGCTGCT
GCAGGCGCTGCACGGCGCCGCCGCCGACGAGCGGCGGGACTCGGCGCTGG
CGCTGCTCGCGTTGCTGCTGCGAGCGGTGGGGCAGGAGTGGGCGGTGGAG
GCAGACGAAGAAGGGGCGGAAGCGGAAGGAGGAGGTCTCGCCGGAGGTGG
GGCCGGCGGCGGCGGCAGCAGCGGTGGTGGTGGTGCTTCTAACGGCGTGA
AGAAGAAGAAGAAGGGGGGCGGGGCGACGAGGAGAAAGCGGGGGACCTTC
GTGGCGTTCGCGGTGAGGTGCGCCGCGGGCGAGGTCCGCATCCTGCTGGA
CGAGGCGTTGTCGCTGTTCGTGCCGGCGGCGGCGAGGGGCGGGGCGTCGA
CCGGGGACGGGGACGGAGACGGAGACGACGAGGCTGGCCCAGGGACCGGG
CAGAAGGCGCGGGGGGCGATGGGCCCTGCGGGGGCGGATCCCTCGATAGG
AATCGCGGCGGAGATCGCGGGCGCCAATGCGGCGGCGGCGGTGGCGGCTG
CGGCTGCTGAAGAGAAAGGCGAGACAAGAGCCGAGGGAGGGGAAGGGGAA
GACGGAGAACGCCCTGCGCCCCGAGCTTCCCTGCCCGCCGCGGAGCTCAG
GGCGATCAAGCAGCAGCGCGAGGCTAGGCTGCTGCGCATGGTGCCCGTCG
GCCTTGGGGTCGCCGAGTCGACCATTGCGTTCCTTTGTGGCGGGGAAGGC
GCGGCGGAGGAGGGCGAAGAAGGGGGCGTCAAGAAATTCCTCCCCGTTGC
TCCGGCCCTGGTGCGAGCCCTCCGCGCGGCCCACGCGACAACCCAGACCC
AGGGGCTCTGCGACGCGCTCTACTGCGTCCAGGCGCTGGGCGACGTCCCC
GGCGGCATGGAAAGACTGCTGAGAGCCGGCGCCGCCCCGGCCGTCGTGAG
CCGCCTCTCGGCCGAAAGCGGGGACAGGGCGGCGGCGGCGGCGGCGGCGG
TGGCGAAGGCGAAGGCGAAGGCGAAGGCGGACGAGGGCGCACCCAGCGGC
GGTGTGGAAGAGAGCAAGGCGGGGGGGGTCGAAGAAACCAAGCAGGCACC
AGCCCCTGCCGCCGCCGCCGCAGCAGTAGCAGCACCGGCCTGTCCTCGTT
CTTCTTCGCCAAACGGACTCGGCGGCGTGAGCAGTGCCGGGCCGGCCGAA
GACGGCGGTGACGGCCCAGCGGAACGAGCGGAGGCCCTCGCGTTCGCGTT
CGTCGGGCGCGCGCTGGAAGCGTCGGGCGGCAACTGTCTGGGCCCGCGGG
AGCTCACGGCCGTCGCCGAGGCGTTCCGAGACGACCCGACCACGGCAAAG
TTCGGCTTCATGGACCTCCTGCTGCGGTGGGCCTCCCTCCAAGAGGAACG
GGGAGAAGCGGCGGTGTCGGTGTCCGCGGACGGGGTGGTGGCGGAGTGGA
CCAGGACCGGCCCGTTCCCGGCGGCCCTGCGGGAGGGGCTGCTGCAGGCG
CTGCACGGCGCCGCCGCCGACGAGCGGCGGGACTCGGCGCTGGCGCTGCT
CGCGTTGCTGCTGCGAGCGGTGGGGCAGGAGTGGGCGGTGGAGGCAGACG
AAGAAGGGGCGGAAGCGGAAGGAGGAGGTCTCGCCGGAGGTGGGGCCGGC
GGCGGCGGCAGCAGCGGTGGTGGTGGTGCTTCTAACGGCGTGAAGAAGAA
GAAGAAGGGGGGCGGGGCGACGAGGAGAAAGCGGGGGACCTTCGTGGCGT
TCGCGGTGAGGTGCGCCGCGGGCGAGGTCCGCATCCTGCTGGACGAGGCG
TTGTCGCTGTTCGTGCCGGCGGCGGCGAGGGGCGGGGCGTCGACCGGGGA
CGGGGACGGAGACGGAGACGACGAGGCTGGCCCAGGGACCGGGCAGAAGG
CGCGGGGGGCGATGGGCCCTGCGGGGGCGGATCCCTCGATAGGAATCGCG
GCGGAGATCGCGGGCGCCAATGCGGCGGCGGCGGTGGCGGCTGCGGCTGC
TGAAGAGAAAGGCGAGACAAGAGCCGAGGGAGGGGAAGGGGAAGACGGAG
AACGCCCTGCGCCCCGAGCTTCCCTGCCCGCCGCGGAGCTCAGGGCGATC
AAGCAGCAGCGCGAGGCTAGGCTGCTGCGCATGGTGCCCGTCGGCCTTGG
GGTCGCCGAGTCGACCATTGCGTTCCTTTGTGGCGGGGAAGGCGCGGCGG
AGGAGGGCGAAGAAGGGGGC
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