mRNA_S-firma_F_contig10279.414.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 306 bits (784), Expect = 1.250e-93 Identity = 149/156 (95.51%), Postives = 154/156 (98.72%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
QEVYRVKLPGNPVVGEGKPENQNHA+IFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFR G+ RRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDK+FFMTAGGVSKAS+GINLSEDIFAGYNGTIRGGQ+
Sbjct: 1457 QEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQI 1612
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A7S2X7C3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7C3_9EUKA) HSP 1 Score: 248 bits (634), Expect = 3.080e-82 Identity = 115/151 (76.16%), Postives = 136/151 (90.07%), Query Frame = 1
Query: 7 VYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRG 459
VYR++LPGNP++GEGKPENQNHA+IFTRGE +QAIDMNQEGYFEEA+KMR LLEEF R R+ +VGFREHIFTG +SS+ANYMA+QE FVTLGQRVL++PL++R+HYGHPDLFDKLF+MT GG+SKASKGINLSEDIFAG+N +RG
Sbjct: 22 VYRIELPGNPIIGEGKPENQNHALIFTRGEIVQAIDMNQEGYFEEAVKMRNLLEEFDRDDSRKHTTIVGFREHIFTGGLSSVANYMAMQEGCFVTLGQRVLHDPLKIRLHYGHPDLFDKLFYMTRGGISKASKGINLSEDIFAGFNTVLRG 172
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.220e-79 Identity = 128/154 (83.12%), Postives = 142/154 (92.21%), Query Frame = 1
Query: 7 VYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
Y +LPGNPV+GEGKPENQNHA+IFTRGEH+QAIDMNQEGYFEEA+KMRCLL+EF R + P +VGFREHIFTGSVSSLANYMALQELSFVT+GQRVL++PLR+RMHYGHPDLFDK+FFMT GG+SKASKGINLSEDIFAGYN TIRGGQV
Sbjct: 1170 AYIDELPGNPVIGEGKPENQNHALIFTRGEHVQAIDMNQEGYFEEAIKMRCLLQEFLRKRDP-PTTIVGFREHIFTGSVSSLANYMALQELSFVTIGQRVLDDPLRIRMHYGHPDLFDKVFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQV 1322
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 264 bits (675), Expect = 5.670e-79 Identity = 124/156 (79.49%), Postives = 141/156 (90.38%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
+E+YR+KLPGNPV+GEGKPENQNHAV+FTRGE+L AIDMNQ+ YFEEALKMR LL+EF + + P ++GFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLR R+HYGHPD+FDKLFFMT GG+SKASKGINLSEDIFAG+N +RGG V
Sbjct: 944 EEIYRIKLPGNPVLGEGKPENQNHAVVFTRGENLMAIDMNQDNYFEEALKMRNLLQEFHKSTRDVPITILGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRQRLHYGHPDIFDKLFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNV 1099
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A6A5A3K6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A3K6_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.350e-78 Identity = 119/151 (78.81%), Postives = 130/151 (86.09%), Query Frame = 1
Query: 4 EVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIR 456
E YR++LPGNP++GEGKPENQN AVIFTRGEHLQ IDMNQ+GY EEALKMR LLEEF G+ RP +VG EHIFTGS+SSLANYMALQE SFVTLGQR L PLRVRMHYGHPD+F+KLFFMT GG SKASKGINLSEDIFAGYN +R
Sbjct: 169 ECYRIRLPGNPILGEGKPENQNSAVIFTRGEHLQTIDMNQDGYLEEALKMRNLLEEFSAGN--RPCTIVGLPEHIFTGSISSLANYMALQETSFVTLGQRTLTRPLRVRMHYGHPDVFNKLFFMTRGGFSKASKGINLSEDIFAGYNNCLR 317
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 261 bits (668), Expect = 5.050e-78 Identity = 129/158 (81.65%), Postives = 140/158 (88.61%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFR--RGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
+E+YRV+LPGNPV+GEGKPENQNHAVIFTRGE LQ IDMNQEG+FEEALKMR LL+EF +GSE P +VGFREHIFTGSVSSLANYMALQE SFVTLGQRVLN PL R+HYGHPD+FDKLFFMT GGVSKASKGINLSEDIFAGYN +RGG V
Sbjct: 1388 EEIYRVRLPGNPVIGEGKPENQNHAVIFTRGEMLQTIDMNQEGFFEEALKMRNLLQEFDHGKGSEGMPTTIVGFREHIFTGSVSSLANYMALQETSFVTLGQRVLNKPLCSRLHYGHPDVFDKLFFMTRGGVSKASKGINLSEDIFAGYNNLVRGGGV 1545
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: B8CDT6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDT6_THAPS) HSP 1 Score: 250 bits (639), Expect = 8.830e-77 Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
QE+YRV+L GNP++GEGKPENQNHA+IFTRGE +Q IDMNQEGYFEEALKMR L+EF + P ++G REHIFTGSVSSLANYMALQE SFVTLGQRVL PL +R+HYGHPD+FDKLFF+T GG+SK+SKGINLSEDIFAGYN IRGGQV
Sbjct: 210 QEIYRVRLAGNPILGEGKPENQNHAMIFTRGEFVQTIDMNQEGYFEEALKMRNALQEFAKRDGPMPITILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLTKPLCIRLHYGHPDVFDKLFFITRGGISKSSKGINLSEDIFAGYNNAIRGGQV 365
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: W7U1M2_9STRA (1,3-beta-glucan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.090e-76 Identity = 123/157 (78.34%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFR-RGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
+E+YRV+LPGNPV+GEGKPENQNHA+IF+RGEH+QAIDMNQEGYFE+A KMR L+EF GS P ++GFREHIFTG+VSSLANYMALQE SFVTLGQRVLN PLR+R+HYGHPDLFDKLFFM GG+SKASKGINLSEDIFAGYN +RGG V
Sbjct: 1570 EEIYRVRLPGNPVLGEGKPENQNHAMIFSRGEHVQAIDMNQEGYFEDAYKMRNFLQEFALTGSPDMPTTILGFREHIFTGAVSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDKLFFMQNGGISKASKGINLSEDIFAGYNNLLRGGSV 1726
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: A0A397F3G1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F3G1_9STRA) HSP 1 Score: 245 bits (625), Expect = 3.770e-76 Identity = 119/151 (78.81%), Postives = 130/151 (86.09%), Query Frame = 1
Query: 4 EVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIR 456
E YR++LPGNP++GEGKPENQN AVIFTRGEHLQ IDMNQ+GY EEALKMR LLEEF G+ RP +VG EHIFTGS+SSLANYMALQE SFVTLGQR L PLRVRMHYGHPD+F+KLFFMT GG SKASKGINLSEDIFAGYN +R
Sbjct: 394 ECYRIRLPGNPILGEGKPENQNSAVIFTRGEHLQTIDMNQDGYLEEALKMRNLLEEFSAGN--RPCTIVGLPEHIFTGSISSLANYMALQETSFVTLGQRTLTRPLRVRMHYGHPDVFNKLFFMTRGGFSKASKGINLSEDIFAGYNNCLR 542
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 254 bits (650), Expect = 1.340e-75 Identity = 121/156 (77.56%), Postives = 137/156 (87.82%), Query Frame = 1
Query: 1 QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRRGSERRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKLFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 468
QEVYRV+LPG+PV+GEGKPENQNHA+IFTRGE++Q IDMNQEGYFEEALKMR L+EF + P ++G REHIFTGSVSSLANYMALQE+SFVTLGQRVL PL +R+HYGHPD+FDKLFF+T GGVSKAS+GINLSEDIFAGYN IRGG V
Sbjct: 1375 QEVYRVRLPGDPVLGEGKPENQNHAMIFTRGEYVQTIDMNQEGYFEEALKMRNCLQEFAKREGPLPTTILGLREHIFTGSVSSLANYMALQEISFVTLGQRVLTRPLHIRLHYGHPDIFDKLFFITRGGVSKASRGINLSEDIFAGYNNVIRGGSV 1530 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10279.414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10279.414.1 >prot_S-firma_F_contig10279.414.1 ID=prot_S-firma_F_contig10279.414.1|Name=mRNA_S-firma_F_contig10279.414.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=156bp QEVYRVKLPGNPVVGEGKPENQNHAVIFTRGEHLQAIDMNQEGYFEEALKback to top mRNA from alignment at S-firma_F_contig10279:2546..4078+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10279.414.1 ID=mRNA_S-firma_F_contig10279.414.1|Name=mRNA_S-firma_F_contig10279.414.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1533bp|location=Sequence derived from alignment at S-firma_F_contig10279:2546..4078+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10279:2546..4078+ >mRNA_S-firma_F_contig10279.414.1 ID=mRNA_S-firma_F_contig10279.414.1|Name=mRNA_S-firma_F_contig10279.414.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=936bp|location=Sequence derived from alignment at S-firma_F_contig10279:2546..4078+ (Sphaerotrichia firma ET2_F female)back to top |