mRNA_S-firma_F_contig10240.372.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7S4P207_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P207_9EUKA) HSP 1 Score: 196 bits (497), Expect = 7.620e-59 Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 1 MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKTGYPPELHIKAYEAGLSGVIYPPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAY 375
M + FGNQIPFCEP+WYQG +PYYT HV FRARVREFVEKE+KPN+DKWIKTGYP LH + Y+ GL ++YP E GG +P DFDAFYE+IM+DEMAR GGGGVLGQ INSMALPPI +
Sbjct: 1 MPKFERFGNQIPFCEPAWYQGHHTPYYTEKHVQFRARVREFVEKEMKPNIDKWIKTGYPKSLHEEIYKTGLGAILYPKEYGGQRPDDFDAFYEVIMIDEMARCGGGGVLGQGGINSMALPPIMNF 125
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A0G4H0N0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H0N0_9ALVE) HSP 1 Score: 183 bits (464), Expect = 8.110e-54 Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 16 PFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKT--GYPPELHIKAYEAGLSGVIYPPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISA 372
PFG+Q+P CEP WYQG S YYT NHVAFR +VR+FVEKE+KP D+WI+ GYP ELH KA++AG+ G+IYP ELGG +P DFDAFYELIM+DEMAR+GGG +LGQ+AINSMALPP+ A
Sbjct: 8 PFGSQLPHCEPYWYQGYPSAYYTENHVAFRKKVRDFVEKEMKPYADQWIRDPKGYPKELHQKAFDAGILGIIYPKELGGYRPPDFDAFYELIMLDEMARLGGGAILGQAAINSMALPPVVA 128
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7S2PUM4_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PUM4_9DINO) HSP 1 Score: 171 bits (434), Expect = 2.060e-49 Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 13 KPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKT--GYPPELHIKAYEAGLSGVIYPPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAYPP 381
+PFG +I CEP+WYQG SPYY +HV FR+ VR FVE+ELKP+VD WI GYP ELH +AYE G+ GV+YP E GGT+P DFDAF+ELI+ DE+AR+GGGGVLGQ +INSMALPP+ + P
Sbjct: 10 EPFGTRIAHCEPAWYQGSSSPYYRDSHVQFRSLVRRFVEEELKPHVDDWIAAPGGYPRELHQRAYEVGVQGVLYPREWGGTRPDDFDAFHELILWDELARVGGGGVLGQMSINSMALPPVMDFGP 134
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: C5L2J1_PERM5 (Acyl-CoA_dh_N domain-containing protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L2J1_PERM5) HSP 1 Score: 124 bits (312), Expect = 5.920e-34 Identity = 64/130 (49.23%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1 MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWI-KTGYPPELHIKAYEAGLSGVIY--PPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAYPP 381
M+ +PFG+Q FCEPSWYQG F+PYYTA+H FR RVR+FV KE+ P + W+ K GYP +H K Y+AGL + P EL T ++D F+E+I DEMAR +I+SMALPP+ Y P
Sbjct: 1 MARFEPFGDQHKFCEPSWYQGAFTPYYTASHAEFRKRVRDFVMKEIDPYAESWLEKGGYPLSIHKKMYDAGLQQAVLRVPSELSKTPSEEYDIFHEIIFFDEMAR--AECYPRMISIDSMALPPLVKYGP 128
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7S4M790_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M790_9EUKA) HSP 1 Score: 130 bits (327), Expect = 3.130e-33 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 4 SAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKTG-YPPELHIKAYEAGLSGVIYPPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAIN-SMALPPI 366
S +G++IPF EPSWY+G SPYY +H FR VR FVE E+ P +W + G +PPELH KAY AG+ G I+P E GGT P DFDAF++LI++DE++R GGVL +ALPP+
Sbjct: 90 SPEDKYGSKIPFGEPSWYRGFKSPYYNESHAKFRETVRSFVETEIMPYTHEWDEAGTFPPELHEKAYRAGIYGAIWPEEYGGTPPKDFDAFHDLILIDELSRCAAGGVLWSCFFCFGIALPPV 212
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A813GTH4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GTH4_POLGL) HSP 1 Score: 124 bits (311), Expect = 2.650e-31 Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 1 MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKTG--YPPELHIKAYEAGLSGVIYPPELGGTKPAD------FDAFYELIMVDEMARMGGGGVLGQSAINSMALPPI 366
M+ + FG+Q P CEP WYQG SPYYTA+H +FRA+ R F +KE++P ++ W+ G YP LH++A AG+ ++ PA+ FDAF+ELIM+DE+A G GG LGQ INSMALPP+
Sbjct: 1 MAHAELFGDQTPGCEPRWYQGYPSPYYTASHTSFRAKCRAFCDKEIQPYLEGWLDRGEVYPASLHLRALAAGVPTAGLSRDVQSWYPAEIVPEGGFDAFHELIMLDEIAASGPGGQLGQMGINSMALPPV 130
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: C5LJ03_PERM5 (Acyl-CoA dehydrogenase, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LJ03_PERM5) HSP 1 Score: 124 bits (310), Expect = 3.040e-31 Identity = 64/130 (49.23%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1 MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWI-KTGYPPELHIKAYEAGLSGVIY--PPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAYPP 381
M+ +PFG+Q FCEPSWYQG F+PYYTA+H FR RVR+FV KE+ P + W+ K GYP +H K Y+AGL + P EL T ++D F+E+I DEMAR +I+SMALPP+ Y P
Sbjct: 1 MARFEPFGDQHKFCEPSWYQGAFTPYYTASHAEFRKRVRDFVMKEIDPYAESWLEKGGYPLSIHKKMYDAGLQQAVLRVPSELSKTPLEEYDIFHEIIFFDEMAR--AECYPRMISIDSMALPPLIKYGP 128
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7J6NBU5_PEROL (Isobutyryl-CoA dehydrogenase, mitochondrial n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NBU5_PEROL) HSP 1 Score: 120 bits (301), Expect = 4.620e-30 Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKTG-YPPELHIKAYEAGLSGVIY--PPELGGTKPADFDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAYPP 381
M+ FG+Q FCEP+WYQG F+PYYTA+H FR RVR+F+ KE++P + W++ G YP +H K Y+ GL + PPELGG ++D F+E+I DE+AR + +I+SMALPP+ Y P
Sbjct: 1 MTRFDSFGDQTKFCEPAWYQGAFTPYYTASHAEFRKRVRDFMAKEVEPYAEGWLQKGEYPLSVHKKMYDVGLQQAVLRVPPELGGASADEYDIFHEIIFFDEVARHECYPRM--ISIDSMALPPLVKYGP 128
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7S4VTS9_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VTS9_9DINO) HSP 1 Score: 120 bits (301), Expect = 9.470e-30 Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 19 FGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKT--GYPPELHIKAYEAGLSGVIYPPELGGTKPAD------FDAFYELIMVDEMARMGGGGVLGQSAINSMALPPISAY 375
FG Q+PFCEP WYQG S YY +H + R R R+FVE E+KP VD W+ + GYP ELH+KA+ AGL + G PA+ +D+F+EL+ +DE+ R G V GQ INSMALPP+ A+
Sbjct: 26 FGEQLPFCEPYWYQGYPSAYYKDSHRSLRQRARDFVEAEVKPYVDDWLASPQGYPRELHVKAFAAGLPTAGLAQAVKGAYPAEVTPEGGWDSFHELVYLDELHRGSAGMVPGQLPINSMALPPLLAH 152
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Match: A0A7S1SI26_9CHLO (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S1SI26_9CHLO) HSP 1 Score: 121 bits (304), Expect = 1.390e-29 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 10 HKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVDKWIKT-GYPPELHIKAYEAGLS----GVIYPPELGGTKPADFDAFYELIMVDEMARMGGGGVL-GQSAINSMALPPI 366
H PFG+ IP+ +PSWY+G+F+PYYTA+HVA+RARVREFVE E+ PN +W + P E+ KA + GL GV +P E G P FD F+ELI++DE++R G GGV+ G S+ LPPI
Sbjct: 256 HAPFGDLIPWGDPSWYRGEFTPYYTASHVAWRARVREFVELEIIPNAHEWDENKAMPKEIFRKAAQVGLLACTVGVPWPTEYAGPGPDGFDYFHELILIDELSRCGSGGVVWGLFGGLSIGLPPI 380 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10240.372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10240.372.1 >prot_S-firma_F_contig10240.372.1 ID=prot_S-firma_F_contig10240.372.1|Name=mRNA_S-firma_F_contig10240.372.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=127bp MSAHKPFGNQIPFCEPSWYQGQFSPYYTANHVAFRARVREFVEKELKPNVback to top mRNA from alignment at S-firma_F_contig10240:62..442- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10240.372.1 ID=mRNA_S-firma_F_contig10240.372.1|Name=mRNA_S-firma_F_contig10240.372.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=381bp|location=Sequence derived from alignment at S-firma_F_contig10240:62..442- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10240:62..442- >mRNA_S-firma_F_contig10240.372.1 ID=mRNA_S-firma_F_contig10240.372.1|Name=mRNA_S-firma_F_contig10240.372.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=762bp|location=Sequence derived from alignment at S-firma_F_contig10240:62..442- (Sphaerotrichia firma ET2_F female)back to top |