mRNA_S-firma_F_contig10234.360.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10234.360.1
Unique NamemRNA_S-firma_F_contig10234.360.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: D8LF41_ECTSI (Signal recognition particle subunit SRP68 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF41_ECTSI)

HSP 1 Score: 727 bits (1877), Expect = 2.830e-258
Identity = 398/484 (82.23%), Postives = 416/484 (85.95%), Query Frame = 3
Query:   45 MAATDDGANMSVAEAAAVDVPAPPAAKLSLTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQETADAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            MA T+DG+   V        PAP  AKLSL  KVHEIAKDAQN+NGLRHGDYHQYRQYCTRRLKRVRS  QVRFMFGKGK FVQKELTP+ VTSASHLEIPLM AERAWA+ MQRKQETADAPYRVRRHV TRLAKAAKW+ DLEALCLETADERTCLEATAY AWMSGNLLLEKEAWREAL+R+STA RICQELGKVG IEDQDLFSRRVEEIEP+LRYCRYNLD         A A E LLEM REDS+AGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRL AG       GS   EDPKPGQYLKVFGAYDDAL T+S E SRLQGKGGG KMEAHR+ELE LRAYAQHHKLRLMLQRNERLV+ELQ KRKAGG      G G+RDPVGEVADIVHVYDALLQSVRSMVTNL GG+D +DDIAE EDE++ES RADEARFRAFRCFFVIEAFSAQQK
Sbjct:    1 MAETEDGSAECVVGMEVAKEPAPSLAKLSL--KVHEIAKDAQNRNGLRHGDYHQYRQYCTRRLKRVRSLPQVRFMFGKGKGFVQKELTPESVTSASHLEIPLMMAERAWAFAMQRKQETADAPYRVRRHVVTRLAKAAKWSGDLEALCLETADERTCLEATAYCAWMSGNLLLEKEAWREALDRFSTADRICQELGKVGAIEDQDLFSRRVEEIEPILRYCRYNLD---------ATASEELLEMSREDSSAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLEAGG------GSPGCEDPKPGQYLKVFGAYDDALGTISQETSRLQGKGGGAKMEAHRSELEGLRAYAQHHKLRLMLQRNERLVQELQEKRKAGG------GGGERDPVGEVADIVHVYDALLQSVRSMVTNLGGGDDENDDIAELEDEVIESARADEARFRAFRCFFVIEAFSAQQK 461          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A836CNG0_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG0_9STRA)

HSP 1 Score: 369 bits (946), Expect = 3.770e-116
Identity = 222/469 (47.33%), Postives = 292/469 (62.26%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQE---TADAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSM---------VTNLVGGE--DTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            L+L++HE  K+ Q+ NGLRHGDY QYR YC+RRL+RVR+++QV+F FGKGK F +K LT DM  +A+ LEIPLM AER+WA+ MQ KQ+   ++      R H+  RL+KAAKWA+DLE LC    DERT LEA AY+A+M GN+LLEKE+W  ALE+ +T HR+C+ELG+VG + DQDLFS R EEIEP +RYC+YNL  A G    A  A E     ++        LLAAKL SVV+EAR +QA AL  V+W+ +++ VR + L VAL+ A E +R L A    GGG G  +         ++V   +DD     + E + LQGKGGG ++E  R EL  L AYA+H KLRLM++RNE LVE L+               G  +P    ADIVH+Y AL+Q+VR M          T+L   E  D       E +  +  V ADEA +RA RCF++ EA++ Q K
Sbjct:  130 LSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGG----ATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDA-----LSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQ-----------ASTGGSEPRN--ADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGK 576          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A7S2BZZ1_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZZ1_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.030e-89
Identity = 191/464 (41.16%), Postives = 263/464 (56.68%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTP-DMVTSASHLEIPLMTAERAWAYGMQRKQETA--DAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRK------AGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            + L+VHE     Q  NGLRHGDY Q     TRRL+RVR      F +G+G+ FVQ+ELT  D+  SA  L +PL+ +ERAWAY MQ KQE    +    V  H+  RL KA +W+A  E LC   AD+ T LEA AY++WM+ NL LE+  W  ALE+Y+TAHRIC+++G VG +E QDLF++R EEI   +R+C YNL   TG    +  A   L       + +GGDLL A+L++V+ +ARK+QA  L+ + WR   +AVR ETLR+A+V A EL   L           S++ +D    QY KV  A +DAL  V++  S L    GG K+EA R +L  L  Y  H KL  M +R++RLV EL+   K      +         +    P     DIVH+Y +L Q ++ M+  L G         EE+D+L ++++A  A  RA RC+F+ E +S   K
Sbjct:   14 IALRVHETISSLQGLNGLRHGDYEQXXXXATRRLRRVRKG--ANFTYGRGRQFVQRELTAEDVEASAPLLMVPLLNSERAWAYAMQLKQEITRGEGNAAVSNHLLRRLTKAVQWSAAFEELCKVRADDATRLEANAYASWMAANLDLERGEWAGALEKYTTAHRICEDMGTVGSVELQDLFTQRAEEIRQSIRFCNYNL---TGGSSSSTDAPPTL-------TGSGGDLLQAQLDAVLVDARKRQAQTLEELTWRSHTIAVRDETLRLAIVSARELDGDLE----------STTADDRSDNQYSKVLNACEDALKIVNSNISSLATMTGGTKLEAQREDLRLLSGYLSHIKLTRMFERSKRLVLELRESWKIHTLTFSANKSSAAAAKSPARP----EDIVHLYGSLTQILQDMLA-LPG--------VEEDDDLADALQAKLASVRAHRCYFLAETYSTNAK 442          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A7S2B7L4_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7L4_9STRA)

HSP 1 Score: 285 bits (728), Expect = 8.180e-86
Identity = 186/460 (40.43%), Postives = 263/460 (57.17%), Query Frame = 3
Query:  120 AKLSLTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQ--ETADAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDS---VEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFS 1484
            A++   LK+HE+    Q  NG+RH DY  YR++ TRRL++VR S  + F +G+G++FV+KE+T +    A HL I L+  ERAWAY MQ KQ     ++   +  H+  R  KA KW+  LE L    AD RTCLE  AY++WMS NL +E+EAW +ALE ++TAHRIC+ELGKVG +E QDLF++R EEI   +RYC YN+ +  G+G  A A  +  ++   E        L A+L++V A      ASA+D+   +EWR  K+ +  E LR  +VKA E+ R L           +++ E+ K  QY KV  AYDDAL T+S +  +L    GG K EA R +L  L     + KL  ML+RN++L   L+A  +A        G  +  P     DIVH+YDA+ Q  + M+  L G ED        +D+L++  +A     RA RCFF+ E +S
Sbjct:   12 AEVKAELKIHEVVAKLQQLNGMRHSDYEAYRRFLTRRLRKVRKS--INFTYGRGRNFVKKEITAENAQPA-HLMILLLNTERAWAYAMQLKQTMNRGESENHLANHMLRRFTKAVKWSTALEQLSGNLADGRTCLEINAYASWMSANLYVEQEAWSKALENFTTAHRICEELGKVGSLEQQDLFTQRSEEITQSIRYCNYNMGSDKGEGGVAEAMADGGMQSSAE--------LEAQLDAVTAST----ASAVDNKDMMEWRHHKIPIHDEDLRKQVVKAKEVDRNLD----------TTALEERKESQYFKVINAYDDALHTLSTKLDKLSEVSGGAKAEAMRRDLSLLTGALSYLKLSRMLERNKQLATGLRATWRA--ETLARAGGANARP----EDIVHLYDAVGQIYQDMI-KLTGVED--------DDDLMDEFQAKMMLNRACRCFFLAETYS 431          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A2R5GG74_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG74_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.330e-72
Identity = 187/496 (37.70%), Postives = 254/496 (51.21%), Query Frame = 3
Query:   45 MAATDDGANMSVAEAAAVDVPAPPAAKLSLTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRF-MFGKG--KSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQET---ADAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQ--GKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRN----ERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            M A  DG     AEAAA    A P  KLSL +   E  K +Q QNGLRH DY +YRQYCTRRL+R+R +++V F + GK   ++F  +ELT +  T    L++ L+ AERAW Y MQ K E     + P R R H+  RLAKA +W+A L  LC E AD+RT LEA AY+AWM GNLLLEKE W++A   +  A  + ++L  +   E ++L   R+E+IEP LRYC+YNL    G G    A ++  +E E      G DLL AK++ V+ E RK QA    +V WRG +V VRS  LRV L++  +    L     A GGD      D     +L+     DD L     E S+            E    E + +RAY +  KL + + RN     +++ E+                G +  V +  D+VH+YD  LQSV  ++  L  G D     AEE+      +R  E    AFR   +   + AQ K
Sbjct:    1 MGAEKDGPTEPAAEAAAA---AGPQEKLSLNIL--EAVKTSQQQNGLRHRDYQRYRQYCTRRLRRLRKNKRVDFKLAGKNPREAFQGRELTAEDCTDERFLQLALVNAERAWGYAMQLKDENQRDGEEP-RKRLHLVRRLAKATRWSAKLRELCHEVADDRTTLEAEAYAAWMQGNLLLEKEWWKDAYLEFEKARNVYEQLSSIVEPELRELMQERIEDIEPALRYCKYNLSREEGPGKSQDALKQLQIEAE------GSDLLQAKIKKVIEENRKIQAEQASTVSWRGHQVPVRSPALRVKLLEIRDQLSALEEAKNAAGGDXXXX--DDLEAAFLETLSVCDDTLRLAREEKSKPSKASSSSTANPEKIAEEYDYIRAYIKTQKLLISIDRNMLYASKMLREMD---------------GQKTTV-KPQDLVHIYDQSLQSVHDILDLL--GPDAEQHSAEEDVVSAPEMRVQEGICTAFRTLLIGRTYQAQAK 464          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A6A7G753_9CRUS (Signal recognition particle subunit SRP68 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G753_9CRUS)

HSP 1 Score: 246 bits (628), Expect = 4.130e-71
Identity = 166/463 (35.85%), Postives = 263/463 (56.80%), Query Frame = 3
Query:  123 KLSLTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQETADAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEAS-----RLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            +  +TL +  + K +Q QNGLRH DY +YRQYCTRRL+RVR +  ++F  G+ K+FV++ +    +    +L IPLM AERAWAY MQ+K E  D   R R H+  RL KAA W++ L  LC   AD RT LEA AY +WM+GN+LLE+E W +ALE++  A  +  +L K+G +E   L   R E + P ++YC Y L ++ G GDG+  +E  LL+    D     ++L +K+E+V+++ R +QA + D+++W+G+ V + +E +R+++++++EL  +L         DG  + E      +++VF +YD+AL  V  +       R++G   G +  A    L  LR Y   HKLR  + RN  L E L A   +          G +    + +D+V +Y+ LL +V ++    VG   +++ + +E       VR   A F +FRCF+V E+++A  K
Sbjct:    8 EFKVTLPILAVIKTSQQQNGLRHNDYRRYRQYCTRRLRRVRKT--LKFTHGR-KNFVKRTVELKDIKDERYLLIPLMQAERAWAYAMQQKHEMTDDRDRSRFHLIRRLTKAAFWSSQLTKLCSVAADARTALEAEAYCSWMNGNILLEREIWSDALEKFVHAKTVFDQLSKLGNLEQNALCHERSENLGPSIKYCSYVLGSSAG-GDGSLNSE--LLK----DRGTLDEILLSKVENVMSDIRTQQAKSFDTIQWKGEYVPIHNEKVRLSILRSNELTSQL---------DGQENAEKQMD-LFIEVFSSYDEALVFVRNDLQNEANKRVRGSEPGPREVA----LGLLRDYLTFHKLRNTIHRNLLLTESLTASLDSENNSDQPPSIGKKSV--KPSDLVVMYEKLLNNVENL--GEVGEMKSNESLHQE-------VRLKTAVFTSFRCFYVAESYAAALK 435          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A024TMN8_9STRA (Signal recognition particle subunit SRP68 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMN8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 5.650e-71
Identity = 164/463 (35.42%), Postives = 252/463 (54.43%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQETA--------DAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            L+L + E  K +Q QNGLR GDY +YRQ+C RRL+R+R    ++F+ GKGK FV KE+TPD+ +   HL +PL  +ERAW+Y MQ +++          +A  R++ H+  RL KA  W+  L ALC E AD RT LEA AY+++MSGNL L KE W+ ALE++STA RI  EL KVG +  QDL  + ++EI P +RYC YNL      G  ++ + + L    RE +T+   LL +K++ V  E  K +A  + ++ WRG+ + + +  + VALV+ +E   +L  G         +  +  +   Y+ +FG YD  L  ++AE  +      G   +AHR  + AL  Y ++ K   ++ RN  L  +L+++   GG      G GD         ++H+ D L+++V  M   + G  D             ++ +A +  F AFRC +V + +  Q K
Sbjct:   22 LSLPILETIKFSQQQNGLRFGDYTRYRQHCARRLRRLRKG--LKFVHGKGKQFVPKEVTPDIASEVRHLMLPLYHSERAWSYAMQLREDERNDKDEHGDEASSRIKFHLLGRLKKAVAWSDKLTALCAERADVRTNLEAEAYASYMSGNLALYKEEWKVALEKFSTAQRIYSELAKVGTVVQQDLLHQILDEISPFMRYCEYNL------GGSSSLSLQEL----RESTTSA--LLQSKIDQVFHEEAKTKAKDMAAITWRGRAIPIPNSDVSVALVRPEEHLAKLKKG---------TDNDKKRDAIYVDLFGCYDMILRLLAAEKIKTDTMKSGFMADAHRENVTALDEYVRYIKQTHVIDRNVVLFTQLKSRLGGGGV-----GPGD---------LIHILDMLIRNVDDMAA-IPGTTDHGP---------FKAYQALQCTFHAFRCNYVAQVYVGQNK 437          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A1V9YWD3_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWD3_9STRA)

HSP 1 Score: 240 bits (612), Expect = 8.330e-69
Identity = 165/463 (35.64%), Postives = 244/463 (52.70%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQR-------KQETAD-APYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            L+L + E  K +Q QNGLR GDY++YRQ+C RRL+R+R    ++FM GKGK FVQKE+T D      HL +PL  +ERAW+Y MQ        K+E  D A  R++ H+  RL KA  W+  L  LC +  D RT LEA AY+++M+GNL L KE W+ ALE+++TA RI  EL KVG    QDL  + +EEI P +RYC YNL+  +G            L+  RE +T+   LL +K++ ++ E  K +A  +  + W+G+++ + S+ L VA+V+ DE   +L         +     E  +   Y+++FG YD  L  ++ E S+      G   EA R  + AL  Y +  KL    +RN  L  +L+A+              DR P     D++H+ + LLQ++  M    V G       AEE   ++      +  F A R  +V + + A  K
Sbjct:   24 LSLPILETIKFSQQQNGLRFGDYNRYRQHCARRLRRLRKG--LKFMHGKGKGFVQKEVTADNAYEVRHLMLPLYHSERAWSYAMQLREDERNDKEENGDEASSRIKFHLLGRLKKAVVWSDKLATLCTQRGDARTSLEAEAYASYMAGNLALYKEEWKAALEKFTTAQRIYTELAKVGTSVQQDLVHQILEEISPFMRYCEYNLNMLSGTS----------LQDLRESTTSA--LLQSKIDQIMHEEAKTKAKTMAKITWKGREITIPSDDLSVAMVRPDEHLAKL---------NKPDITEKKRDITYVELFGCYDAILRMLANERSKTDSMKSGFMAEAQRENITALEEYVRFLKLTHTAERNFNLFTQLKARLST-----------DRAP----GDMIHILEMLLQNIDDM--RAVPG-------AEEHPSMINKYSILQPLFHAMRANYVAQMYLAGNK 439          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: A0A6G0WAZ1_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAZ1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 9.910e-68
Identity = 150/416 (36.06%), Postives = 233/416 (56.01%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQETA--------DAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVT 1355
            L+L + E  K +Q QNGLR GDY +YRQ+C RRL+R+R    ++F+ GKGK FV KE+T D  T   HL +PL  +ERAW+Y MQ +++          DA  R++ H+  RL KA  W+  L ALC + AD RT LEA AY+++M+GNL L KE W+ ALE++ TAHRI  EL KVG    +DL  + ++EI P +RYC YNL   +G    ++++ E  L+  RE + +   LL +K++ V  E  K +A  + ++ WR + V + S  L VA+V+ DE   +L            +  E  +   Y+++F +YD  L  +++E S+ +    G   EA R  ++ L  Y +  K   +++RN  L+++L+A+           G GD         ++H+ + L+++V  M T
Sbjct:   22 LSLPILETIKFSQQQNGLRFGDYTRYRQHCARRLRRLRKG--LKFLHGKGKQFVPKEVTADNATEVRHLMVPLYHSERAWSYAMQLREDERNDKEENGDDASSRIKFHLLGRLKKAVSWSDQLSALCSKRADARTSLEAEAYASYMAGNLALYKEEWKLALEKFGTAHRIYSELAKVGTTVQKDLLHQILDEISPFMRYCDYNLGVLSG----SSSSNEATLQELRESTNSA--LLQSKIDQVFLEEAKSKAKDMAAITWRQRSVPIPSTDLSVAMVRPDEHLAKL---------KKITDNEKKRDAVYMELFASYDAILRLLASEKSKSETMKSGFMAEAQRENVQFLDEYIRFVKQTHVVERNLTLMQQLKAR------LGVDVGPGD---------MIHILETLVRNVDDMQT 405          
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Match: W4G3I1_9STRA (Signal recognition particle subunit SRP68 n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3I1_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.270e-67
Identity = 159/463 (34.34%), Postives = 249/463 (53.78%), Query Frame = 3
Query:  132 LTLKVHEIAKDAQNQNGLRHGDYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEIPLMTAERAWAYGMQRKQETA--------DAPYRVRRHVATRLAKAAKWAADLEALCLETADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGRIEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDSTAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASRLQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAGGXXXXXXGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIAEEEDELVESVRADEARFRAFRCFFVIEAFSAQQK 1496
            L+L + E  K +Q QNGLR GDY +YRQ+C RRL+R+R    ++F+ G+GK F+ K++TP+  +   HL +PL  +ERAW+Y MQ +++          +A  R++ H+  RL KA  W+  L ALC+E AD RT LEA AY+++M GNL L +E W+ ALE++STA RI  EL KVG +  +DL  + ++EI P +RYC YNL        G  ++   L E+ RE +T+   LL AK++ V  E  K +A  L ++ WRG+ + + S  + VAL++ DE   +L  G         +  +  +   Y+ +FG YD  L  ++AE ++      G   EA R  +  L  Y ++ K   +++RN  L+ +L+A+ +            D  P     D+VH+ D L+++V  M   + G  D +  +           RA +  F A RC +V + +    K
Sbjct:   22 LSLPILETIKFSQQQNGLRFGDYTRYRQHCARRLRRLRKG--LKFLHGRGKQFIPKDVTPENASEVRHLMLPLYHSERAWSYAMQLREDERNDKEEHGDEASSRIKFHLLGRLKKAVAWSDKLTALCVERADVRTNLEAEAYASYMGGNLALYQEEWKVALEKFSTAQRIYSELAKVGTVVQRDLLHQILDEISPFMRYCEYNL--------GGTSSSLSLQEL-RESTTSA--LLQAKIDQVFHEEAKTKAKDLAAITWRGRAIPIPSADVSVALIRPDEHLAKLKKG---------TDNDKKRDAIYVDLFGCYDTILRLLAAEKTKSDTMKSGFMAEAQRENIAFLDEYIRYVKQTHVIERNVALLTQLKARLEV-----------DLGP----GDLVHILDMLIRNVDDMAA-IPGAADHAPFL---------KYRALQLIFHALRCTYVAQVYLGLNK 437          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10234.360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF41_ECTSI2.830e-25882.23Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A0A836CNG0_9STRA3.770e-11647.33Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7S2BZZ1_9STRA1.030e-8941.16Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7S2B7L4_9STRA8.180e-8640.43Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A2R5GG74_9STRA1.330e-7237.70Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A6A7G753_9CRUS4.130e-7135.85Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A0A024TMN8_9STRA5.650e-7135.42Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A0A1V9YWD3_9STRA8.330e-6935.64Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A6G0WAZ1_9STRA9.910e-6836.06Signal recognition particle subunit SRP68 n=1 Tax=... [more]
W4G3I1_9STRA1.270e-6734.34Signal recognition particle subunit SRP68 n=11 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10234contigS-firma_F_contig10234:1590..4891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LF41
Preferred nameSRP68
PFAMsSRP68
Max annot lvl2759|Eukaryota
KEGG koko:K03107,ko:K06883
KEGG TC3.A.5.9
KEGG Pathwayko03060,map03060
GOsGO:0003674,GO:0005047,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005786,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006617,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0022607,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034399,GO:0034613,GO:0034622,GO:0042886,GO:0043021,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0065003,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1990904
Evalue3.82e-259
EggNOG OGsKOG2460@1|root,KOG2460@2759|Eukaryota
Descriptionendoplasmic reticulum signal peptide binding
COG categoryJ
BRITEko00000,ko00001,ko02044
Hectar predicted targeting categoryother localisation
Exons5
Model size1496
Cds size1452
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10234.360.1prot_S-firma_F_contig10234.360.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10234 1634..4891 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815553.0710635-UTR-S-firma_F_contig10234:1589..16331622815553.0710635-UTR-S-firma_F_contig10234:1589..1633Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10234 1590..1633 +
1696949411.0747116-UTR-S-firma_F_contig10234:1589..16331696949411.0747116-UTR-S-firma_F_contig10234:1589..1633Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10234 1590..1633 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815553.0830762-CDS-S-firma_F_contig10234:1633..18881622815553.0830762-CDS-S-firma_F_contig10234:1633..1888Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 1634..1888 +
1696949411.086088-CDS-S-firma_F_contig10234:1633..18881696949411.086088-CDS-S-firma_F_contig10234:1633..1888Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 1634..1888 +
1622815553.0950105-CDS-S-firma_F_contig10234:2308..24701622815553.0950105-CDS-S-firma_F_contig10234:2308..2470Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 2309..2470 +
1696949411.094788-CDS-S-firma_F_contig10234:2308..24701696949411.094788-CDS-S-firma_F_contig10234:2308..2470Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 2309..2470 +
1622815553.1044307-CDS-S-firma_F_contig10234:2755..29371622815553.1044307-CDS-S-firma_F_contig10234:2755..2937Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 2756..2937 +
1696949411.1034424-CDS-S-firma_F_contig10234:2755..29371696949411.1034424-CDS-S-firma_F_contig10234:2755..2937Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 2756..2937 +
1622815553.1153927-CDS-S-firma_F_contig10234:3521..42611622815553.1153927-CDS-S-firma_F_contig10234:3521..4261Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 3522..4261 +
1696949411.114536-CDS-S-firma_F_contig10234:3521..42611696949411.114536-CDS-S-firma_F_contig10234:3521..4261Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 3522..4261 +
1622815553.1257238-CDS-S-firma_F_contig10234:4778..48911622815553.1257238-CDS-S-firma_F_contig10234:4778..4891Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 4779..4891 +
1696949411.1255605-CDS-S-firma_F_contig10234:4778..48911696949411.1255605-CDS-S-firma_F_contig10234:4778..4891Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10234 4779..4891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10234.360.1

>prot_S-firma_F_contig10234.360.1 ID=prot_S-firma_F_contig10234.360.1|Name=mRNA_S-firma_F_contig10234.360.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=484bp
MAATDDGANMSVAEAAAVDVPAPPAAKLSLTLKVHEIAKDAQNQNGLRHG
DYHQYRQYCTRRLKRVRSSRQVRFMFGKGKSFVQKELTPDMVTSASHLEI
PLMTAERAWAYGMQRKQETADAPYRVRRHVATRLAKAAKWAADLEALCLE
TADERTCLEATAYSAWMSGNLLLEKEAWREALERYSTAHRICQELGKVGR
IEDQDLFSRRVEEIEPLLRYCRYNLDTATGDGDGAAAAEEHLLEMEREDS
TAGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKA
DELARRLGAGAAAGGGDGSSSGEDPKPGQYLKVFGAYDDALATVSAEASR
LQGKGGGVKMEAHRAELEALRAYAQHHKLRLMLQRNERLVEELQAKRKAG
GGGGGGAGRGDRDPVGEVADIVHVYDALLQSVRSMVTNLVGGEDTSDDIA
EEEDELVESVRADEARFRAFRCFFVIEAFSAQQK
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mRNA from alignment at S-firma_F_contig10234:1590..4891+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10234.360.1 ID=mRNA_S-firma_F_contig10234.360.1|Name=mRNA_S-firma_F_contig10234.360.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3302bp|location=Sequence derived from alignment at S-firma_F_contig10234:1590..4891+ (Sphaerotrichia firma ET2_F female)
TGCTGCTGTACTCTGTTGGTTGAGAGATTCAACGGCAGACTGCGATGGCT GCCACAGATGATGGCGCCAATATGAGCGTCGCAGAGGCGGCAGCGGTGGA TGTGCCGGCGCCACCGGCTGCAAAGCTCTCTCTAACCCTGAAGGTGCACG AGATCGCCAAGGACGCCCAGAACCAGAACGGGCTGCGACACGGCGACTAC CACCAGTACCGACAGTATTGCACCCGGAGGCTAAAGCGGGTGCGCTCTTC GCGGCAAGTCCGCTTCATGTTCGGCAAAGGAAAGAGCTTCGTGCAGAAGG TAGGCTGGTTCTTTCTTCCGTTCAAGTTTTCTTCACGCAACTGCAGGAGG AAGGTTGCTGTTCTCAGCAGAGGCAGAGAGCGGCGCACAGCCTCCAGGTG TTTACCCAGCAACTGCAGGAGTTCTGCAGTTGGTTCCTGCCAGTGAAGCT CCTAGACTTGGCAATCAAGCGCTTTCATGAGTTGCTCGCCATCTTTGTTA CTCTTTACTGCTGAAACAATATAACGTATAAGCGTGGGTTACACTACACG GCGTCTCCAGCAGCTTACCTTCGCTTCGATCGTTCGGATATACAGCAGTA GTACTCCGTAATTTAGAGTCGCGAGCGGGCAGTGAGCGGCTGATAGCAAC CCGTTGACCGCCACTCGCTGCTCTGTCCTCACATTCTCCACTTGCACGAC ACATTTTGCCAACATGAAGGAACTTACTCCGGACATGGTGACCTCGGCGA GCCACCTGGAGATCCCCCTCATGACCGCCGAGAGAGCCTGGGCATACGGA ATGCAGCGCAAGCAGGAGACGGCCGACGCCCCGTACCGGGTCAGACGCCA CGTTGCCACCCGTCTTGCCAAAGCAGCCAAGGTGAGGCTCAAAGACGAAA CAGAGCTCCTTTCCAATTAGTTGAAGTTGGCGGCTTGGCGGCTCAAGCGG CTATGGAAGGACCCTCACACGAGTAATTTAGCGCCTAAACTTCCATCAAA CAACACCAGTTGTTGACAGCAGTTTGTTTTTCTCGGCAACTACATTTATC GGCATAAATGCGTTCCGTTTTCCTGTGCCATCGATCTACGCTCATCTCCC CATCTCTCCGCGGACGCGGTCGCGATCGACCCGATGGTGTGTTCTGCAAC GGCAACGAAAATTAAGTGGGCGGCGGACTTGGAAGCCCTCTGCCTCGAGA CGGCCGACGAGCGCACCTGCCTCGAGGCCACCGCCTACTCCGCGTGGATG TCGGGGAACTTGCTGCTGGAGAAGGAGGCGTGGCGCGAGGCCCTGGAGCG GTACTCCACGGCGCACCGCATCTGCCAGGAGCTGGGAAAGGTCGGTCGGT GACGCTCCCTCGTTGTTTGCGTTCGTCGTTGAGTTTTTTTTTTCGTGGTG GAAACGTGTGTTGCCGCCGTGTTTTTGGTGGGAATGGTGGTTTTCCTCCA AGTCCTTTGTTGTTTTGAAACAGCCTCGTTGCCTGGCGTAGAGAGCCGGT GCGACAGGAAGACGCGAGGCGTGACGTGTCTCCGCCGGCCAGAGAGTTTC TTGTGACACCCCGCCCAAGGCTTCCGGACATCGCGAAGTTGTTTTCTGGC GCTTCGTGAGGACAGCAGTAGGACAGCCGAACCCACCGGAGCTGTTTCCG CGCACAGCTCAGCACGTACATCCGTGGTCAAAAGTAGAAGAATGCAGGCT CTCTACTCCAAAGGAACCCTGTGATACATGAGGGGATGGACCCGCAAGCA CGCGCTTCGGCTATCTTGCAGCCAACCAGCACAACCCACCCGTGAAAGCG AACAGAGGCACGGATGGAACCTGAACGAGGGCCGTCAACATTTCTCTCTG GCCTCTGACTCCCTGCTGCTCAAAACCAACCAACACATCGAAACGTTAAA ATTCCTTTTCCGCAATCCGTCTAGGTCGGGAGAATCGAAGATCAGGACCT CTTCTCCCGCCGGGTGGAAGAGATCGAGCCGCTCCTGCGATACTGCCGGT ACAACCTCGATACCGCCACCGGCGACGGCGACGGGGCGGCGGCCGCGGAG GAGCACCTCCTCGAGATGGAGCGGGAGGACTCGACCGCCGGGGGCGACCT GCTGGCGGCGAAGCTCGAGTCCGTCGTGGCCGAGGCGCGCAAGAAGCAGG CCAGCGCCCTGGACAGCGTGGAGTGGCGGGGCAAGAAGGTGGCCGTGCGC TCGGAGACCCTCCGCGTGGCGCTGGTCAAGGCCGACGAGCTTGCCCGGCG GTTGGGAGCAGGGGCGGCGGCGGGGGGTGGTGACGGTAGTAGTAGCGGCG AGGACCCGAAGCCCGGCCAGTACCTGAAGGTATTCGGCGCGTACGATGAT GCGCTGGCGACAGTCTCGGCGGAGGCGTCGCGGCTCCAGGGGAAGGGGGG CGGGGTCAAGATGGAGGCGCACCGGGCTGAGCTGGAGGCGCTGCGCGCGT ACGCGCAGCACCATAAGCTCAGGCTCATGCTGCAGAGGAACGAGCGCCTC GTGGAGGAGCTCCAGGCGAAGAGGAAGGCCGGGGGCGGGGGCGGGGGTGG GGCGGGACGAGGGGATCGGGATCCGGTGGGCGAGGTGGCCGACATCGTGC ACGTGTACGACGCCCTGTTGCAGAGCGTGAGGAGCATGGTGACCAACCTC GTGGGAGGGGAAGATACCAGCGGTGAGAGAGACGGGCGTTAGAGGGAGCC GATGCTGCTGTGTTCCGCCGCTGCCGGGTTGGTGTTGTTCTTTTGTGTGT TGAGGTGTTGCTCGAAATTGCCCGGACGAGTCCGACTTGGAGTTCGGATG GAAGGGCAGATTGAAAGAGTCGAGAACTGTTGCTGTTCGGTGGACAGGGT TGCCAGTTTTTTTCGTGCCATACGCCGCCTTCGGTGCCATGTAACGTGTT GGCTCTTTCTCCGAGTTTTCGATTTTTGGGGGAGTTTTGCGTGATGCGAT GCTTCGAGCACTCACAGGAGCGCCAAGGGCTTGACAATGGGCGAGCACCC ACCTGGTTTGTTTTTAAGGCCGAGTGTGTGCGTCTGCGCGCTTGTAACCA CCCATACCTGCGCCGCTCCATCTCTACGATGCTTCCTAGAATACCTCCCC CACGTCGTTTTGCGGTCGGTGACATTCCTGAAGCCTAGCCTCTCTGTTTG CCTTGCCTGGGAAACCGTGTGTCCCTTTCTTGACACCAGACGATATCGCC GAGGAGGAGGACGAGTTAGTGGAGAGCGTTCGGGCAGACGAGGCAAGGTT TAGGGCGTTCCGCTGCTTCTTCGTCATCGAGGCATTCTCGGCCCAGCAGA AG
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Coding sequence (CDS) from alignment at S-firma_F_contig10234:1590..4891+

>mRNA_S-firma_F_contig10234.360.1 ID=mRNA_S-firma_F_contig10234.360.1|Name=mRNA_S-firma_F_contig10234.360.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2904bp|location=Sequence derived from alignment at S-firma_F_contig10234:1590..4891+ (Sphaerotrichia firma ET2_F female)
ATGGCTGCCACAGATGATGGCGCCAATATGAGCGTCGCAGAGGCGGCAGC
GGTGGATGTGCCGGCGCCACCGGCTGCAAAGCTCTCTCTAACCCTGAAGG
TGCACGAGATCGCCAAGGACGCCCAGAACCAGAACGGGCTGCGACACGGC
GACTACCACCAGTACCGACAGTATTGCACCCGGAGGCTAAAGCGGGTGCG
CTCTTCGCGGCAAGTCCGCTTCATGTTCGGCAAAGGAAAGAGCTTCGTGC
AGAAGATGGCTGCCACAGATGATGGCGCCAATATGAGCGTCGCAGAGGCG
GCAGCGGTGGATGTGCCGGCGCCACCGGCTGCAAAGCTCTCTCTAACCCT
GAAGGTGCACGAGATCGCCAAGGACGCCCAGAACCAGAACGGGCTGCGAC
ACGGCGACTACCACCAGTACCGACAGTATTGCACCCGGAGGCTAAAGCGG
GTGCGCTCTTCGCGGCAAGTCCGCTTCATGTTCGGCAAAGGAAAGAGCTT
CGTGCAGAAGGAACTTACTCCGGACATGGTGACCTCGGCGAGCCACCTGG
AGATCCCCCTCATGACCGCCGAGAGAGCCTGGGCATACGGAATGCAGCGC
AAGCAGGAGACGGCCGACGCCCCGTACCGGGTCAGACGCCACGTTGCCAC
CCGTCTTGCCAAAGCAGCCAAGGAACTTACTCCGGACATGGTGACCTCGG
CGAGCCACCTGGAGATCCCCCTCATGACCGCCGAGAGAGCCTGGGCATAC
GGAATGCAGCGCAAGCAGGAGACGGCCGACGCCCCGTACCGGGTCAGACG
CCACGTTGCCACCCGTCTTGCCAAAGCAGCCAAGTGGGCGGCGGACTTGG
AAGCCCTCTGCCTCGAGACGGCCGACGAGCGCACCTGCCTCGAGGCCACC
GCCTACTCCGCGTGGATGTCGGGGAACTTGCTGCTGGAGAAGGAGGCGTG
GCGCGAGGCCCTGGAGCGGTACTCCACGGCGCACCGCATCTGCCAGGAGC
TGGGAAAGGTCGGTCGTGGGCGGCGGACTTGGAAGCCCTCTGCCTCGAGA
CGGCCGACGAGCGCACCTGCCTCGAGGCCACCGCCTACTCCGCGTGGATG
TCGGGGAACTTGCTGCTGGAGAAGGAGGCGTGGCGCGAGGCCCTGGAGCG
GTACTCCACGGCGCACCGCATCTGCCAGGAGCTGGGAAAGGTCGGTCGAA
TCGAAGATCAGGACCTCTTCTCCCGCCGGGTGGAAGAGATCGAGCCGCTC
CTGCGATACTGCCGGTACAACCTCGATACCGCCACCGGCGACGGCGACGG
GGCGGCGGCCGCGGAGGAGCACCTCCTCGAGATGGAGCGGGAGGACTCGA
CCGCCGGGGGCGACCTGCTGGCGGCGAAGCTCGAGTCCGTCGTGGCCGAG
GCGCGCAAGAAGCAGGCCAGCGCCCTGGACAGCGTGGAGTGGCGGGGCAA
GAAGGTGGCCGTGCGCTCGGAGACCCTCCGCGTGGCGCTGGTCAAGGCCG
ACGAGCTTGCCCGGCGGTTGGGAGCAGGGGCGGCGGCGGGGGGTGGTGAC
GGTAGTAGTAGCGGCGAGGACCCGAAGCCCGGCCAGTACCTGAAGGTATT
CGGCGCGTACGATGATGCGCTGGCGACAGTCTCGGCGGAGGCGTCGCGGC
TCCAGGGGAAGGGGGGCGGGGTCAAGATGGAGGCGCACCGGGCTGAGCTG
GAGGCGCTGCGCGCGTACGCGCAGCACCATAAGCTCAGGCTCATGCTGCA
GAGGAACGAGCGCCTCGTGGAGGAGCTCCAGGCGAAGAGGAAGGCCGGGG
GCGGGGGCGGGGGTGGGGCGGGACGAGGGGATCGGGATCCGGTGGGCGAG
GTGGCCGACATCGTGCACGTGTACGACGCCCTGTTGCAGAGCGTGAGGAG
CATGGTGACCAACCTCGTGGGAGGGGAAGATACCAGCGAATCGAAGATCA
GGACCTCTTCTCCCGCCGGGTGGAAGAGATCGAGCCGCTCCTGCGATACT
GCCGGTACAACCTCGATACCGCCACCGGCGACGGCGACGGGGCGGCGGCC
GCGGAGGAGCACCTCCTCGAGATGGAGCGGGAGGACTCGACCGCCGGGGG
CGACCTGCTGGCGGCGAAGCTCGAGTCCGTCGTGGCCGAGGCGCGCAAGA
AGCAGGCCAGCGCCCTGGACAGCGTGGAGTGGCGGGGCAAGAAGGTGGCC
GTGCGCTCGGAGACCCTCCGCGTGGCGCTGGTCAAGGCCGACGAGCTTGC
CCGGCGGTTGGGAGCAGGGGCGGCGGCGGGGGGTGGTGACGGTAGTAGTA
GCGGCGAGGACCCGAAGCCCGGCCAGTACCTGAAGGTATTCGGCGCGTAC
GATGATGCGCTGGCGACAGTCTCGGCGGAGGCGTCGCGGCTCCAGGGGAA
GGGGGGCGGGGTCAAGATGGAGGCGCACCGGGCTGAGCTGGAGGCGCTGC
GCGCGTACGCGCAGCACCATAAGCTCAGGCTCATGCTGCAGAGGAACGAG
CGCCTCGTGGAGGAGCTCCAGGCGAAGAGGAAGGCCGGGGGCGGGGGCGG
GGGTGGGGCGGGACGAGGGGATCGGGATCCGGTGGGCGAGGTGGCCGACA
TCGTGCACGTGTACGACGCCCTGTTGCAGAGCGTGAGGAGCATGGTGACC
AACCTCGTGGGAGGGGAAGATACCAGCGACGATATCGCCGAGGAGGAGGA
CGAGTTAGTGGAGAGCGTTCGGGCAGACGAGGCAAGGTTTAGGGCGTTCC
GCTGCTTCTTCGTCATCGAGGCATTCTCGGCCCAGCAGAAGACGATATCG
CCGAGGAGGAGGACGAGTTAGTGGAGAGCGTTCGGGCAGACGAGGCAAGG
TTTAGGGCGTTCCGCTGCTTCTTCGTCATCGAGGCATTCTCGGCCCAGCA
GAAG
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