mRNA_S-firma_F_contig1023.356.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: D7FRK8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK8_ECTSI) HSP 1 Score: 1046 bits (2706), Expect = 0.000e+0 Identity = 523/723 (72.34%), Postives = 604/723 (83.54%), Query Frame = 2
Query: 194 VLGLALLFTAASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDDEY---VATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQDQDQFTEDGATGDCSSYPGDIDNASPSP--APDSEEESAKEDALVEDDGLEAGVNFSEGSIGSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPDKADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQDVQTFPFNARKALYVRLETHGNSFNNWSAFTEIEVCSKSAGEGNALFGGLEAALGEELETLAGEVCIAPTKLAPVNVKASGSDNVRVLFDGNFETRWATTNTQHESDLNNDKVTVTFGGDVRVSSLLISFFDGHLAHQFFSVYVQSARDYSWTPVMLKEQAAREESLQTFDINLDGVNKLYIVGNGNVVGDFSKFSEIQVLGC 2347
+LGL LL +A A+ I + AG+DFEA CLKVVEPGD+CYLAKGDY HDG+T THGT D ITITGDS ACIKGSNTQDRVLQIAHDYY +EGICFDG HD + VATAIYVLGADKKSTKNGVTSSVTG +M DLEIKNF SECVHFRYFVTH+EVTGCT+QHCG++AFE G G KVGEGIYVGTALDQV DGKAPE KIR+GSADNV+AD C YNWIHHNTFRTYGNECV++KEGSA+NLIEHNVCEQQKD NSGC G RGSDNT R+NE+AEC+GAG RVGGD++ G NH+YGN I++ NGAFSVM+PNQG VCEN IS VD IS G+ DQDQDQFTE ATGDCSSYPGDI+ S +P A A+ DAL DD LEAGVNF++ + SEPEI+V+ETN+SAG SGLG+C SV V KTSVQHPD AD ST V+NLFD DV +Y+S+HRESTYI +ELE+E +VNG+AIGFFMK A EERIQTFDV+VR+A+D DW T+ISRKES G VQTFPF++R ALYVR ETHGNSFNNWSAFTE+EVC ++A E NALFGGL+A L ELE LAG VC AP KL+PV+V ASG D+VRV+FDGNF+TRW+TTNTQ+ESDL+NDKV TFGGD+ VS++ ISF+DG LAHQ FS+Y QSA D SWTPV+L+E AAR+ +LQTF +++DGV+KLY+VG GN VG +SKFSEI+V GC
Sbjct: 4 LLGLGLLAASAKAREIAVAAGEDFEAVCLKVVEPGDSCYLAKGDYYHDGITSTHGTADAPITITGDSAACIKGSNTQDRVLQIAHDYYIVEGICFDGDHDGDNPPNVATAIYVLGADKKSTKNGVTSSVTGFKMIDLEIKNFGSECVHFRYFVTHSEVTGCTIQHCGMEAFEDGGGGKVGEGIYVGTALDQVDDGKAPEVKIRTGSADNVDADECNYNWIHHNTFRTYGNECVDVKEGSAHNLIEHNVCEQQKDPNSGCIGFRGSDNTARFNEIAECLGAGIRVGGDDDFGENNHLYGNAIQSCGNGAFSVMSPNQGVVCENVISDVDAISFGAYDQDQDQFTEAVATGDCSSYPGDIEGVSSTPDSADXXXXXXAEGDALTTDDDLEAGVNFADEAKDSEPEIEVIETNESAGSSGLGDCASVAAVGKTSVQHPDYADGSTSVENLFDSDVDSYYSIHRESTYITLELEDEVDVNGVAIGFFMKAAEEERIQTFDVAVRSADDDDWTTVISRKESSGEMTVQTFPFSSRPALYVRFETHGNSFNNWSAFTELEVCVEAAAESNALFGGLQA-LDSELEALAGAVCDAPAKLSPVSVHASGQDDVRVVFDGNFDTRWSTTNTQNESDLSNDKVIFTFGGDMMVSTVQISFYDGDLAHQIFSIYTQSASDRSWTPVLLEEHAARDVALQTFTLDMDGVHKLYVVGKGNEVGAYSKFSEIEVHGC 725
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A6H5KWV6_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV6_9PHAE) HSP 1 Score: 972 bits (2512), Expect = 0.000e+0 Identity = 494/715 (69.09%), Postives = 569/715 (79.58%), Query Frame = 2
Query: 212 LFTAASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDDEYVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQDQDQFTEDGATGDCSSYPGDIDNASPSPAPDSEEESAKE---DALVEDDGLEAGVNFSEGSIGSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPDKADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQDVQTFPFNARKALYVRLETHGNSFNNWSAFTEIEVCSKSAGEGNALFGGLEAALGEELETLAGEVCIAPTKLAPVNVKASGSDNVRVLFDGNFETRWATTNTQHESDLNNDKVTVTFGGDVRVSSLLISFFDGHLAHQFFSVYVQSARDYSWTPVMLKEQAAREESLQTFDINLDGVNKLYIVGNGNVVGDFSKFSEIQVLGC 2347
L +A AKTIQ+EAG+DFEA CLKVVEPGD C LAKGDY HDG+T HGT+D ITITG S ACIKGSNTQDRVLQIAHDYY ++G+CFDG+HD + VATAIYVLGAD+KSTKNGVTSSVTGL++ DLEI+NF SEC+HFRYFVTH+EVTGCT+Q APE KIR+GSADNV+AD C YNWIHHNTFRTYGNECV++KEGSA NLIEHNVCEQQ+D NSGC G RGSDNT R+N++AEC GAG RVGGDN G GN++YGN I+N NGAFSVM+PNQG VCEN ISGVD IS GSDDQDQ QFTE ATGDCSSYPGDID S APDS +AL DD +EAGVNF++ + SEPEI+V+ TN++AG SGLG+C SV V KTSVQHPD AD ST V+NLFDG+V +Y+SVHRESTYII+ELE+E EVNG+AIGFFMK A EERIQTFDV+VR+A D DW T+ISRKES G +QTFPF++R ALYVR ETHGNSFNNWSAFTE+EVC ++A E NALFGGL+A L ELE LAG VC AP KLAPVNV ASG DNV+V+FDGNF+TRW+TTNTQ+ SDL+NDKV TFGGD+RVS++ ISF+DG LAHQ+FS+Y Q A D SWTPV+LKEQAA +LQTF + +DGV+KLY+VGNGN VG +SKFSEI V GC
Sbjct: 5 LAASAEAKTIQVEAGEDFEAVCLKVVEPGDKCNLAKGDYYHDGITAVHGTEDAPITITGHSEACIKGSNTQDRVLQIAHDYYIVDGLCFDGEHDGDNVATAIYVLGADEKSTKNGVTSSVTGLKLLDLEIRNFGSECIHFRYFVTHSEVTGCTIQ--------------------------------APEVKIRTGSADNVDADECNYNWIHHNTFRTYGNECVDVKEGSAYNLIEHNVCEQQQDANSGCIGFRGSDNTARFNDIAECTGAGIRVGGDNGFGEGNNMYGNGIQNCGNGAFSVMSPNQGVVCENVISGVDAISYGSDDQDQAQFTEAVATGDCSSYPGDIDGVSS--APDSAXXXXXXXSGNALAPDDDIEAGVNFADDAKDSEPEIEVIATNEAAGSSGLGDCASVAAVGKTSVQHPDYADESTSVENLFDGNVDSYYSVHRESTYIILELEDEVEVNGVAIGFFMKAAEEERIQTFDVAVRSANDEDWTTVISRKESSGEMTIQTFPFSSRTALYVRFETHGNSFNNWSAFTELEVCVEAAEESNALFGGLQA-LDSELEALAGGVCDAPVKLAPVNVHASGEDNVKVVFDGNFDTRWSTTNTQNASDLSNDKVIFTFGGDMRVSTVQISFYDGDLAHQYFSIYTQRASDRSWTPVLLKEQAAMNVALQTFTLEVDGVHKLYVVGNGNDVGAYSKFSEIAVYGC 684
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A6H5KRG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG5_9PHAE) HSP 1 Score: 905 bits (2338), Expect = 0.000e+0 Identity = 478/749 (63.82%), Postives = 553/749 (73.83%), Query Frame = 2
Query: 230 AKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDDEYVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQ------------------------------------DQDQFTEDGATGDCSS---YPGDIDNASPSPAPDSEEESAKEDALVEDDGLEAGVNFSEGSIGSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPDKADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQ-DVQTFPFNARKALYVRLETHGN---SFNNWSAFTEIEVCSKSAGEGNALFGGLEAALGEELETLAGEVCIAPTKLAPVNVKASGSDNVRVLFDGNFETRWATTNTQHESDLNNDKVTVTFGGDVRVSSLLISFFDGHLAHQFFSVYVQSARDYSWTPVMLKEQAAREESLQTFDINLDGVNKLYIVGNGNVVGDFSKFSEIQVLGC 2347
++TI I AGDDFEASCLKVVEPGDTC+L KGDY+HDGLTVTHGT+DKRITITGD ACIKGSNTQDRV+QIAHDYYTIEGICFDG H DE VATAIYVLGAD+KSTKNG TSSVTGL+MFDLEIKNF+SECVHFRYFVTHAEV+GCT+Q VKDGKAPEPK+R+GSADNV+ADVC YNWIHHNTFRTYGNECV++KEGSANNL+EHNVCEQQ D NSGCFG+RGSDNTFRWNE+AEC GAG RVGG++ +G GNH+YGN IKNA+ GAF+VM+PNQGTVCEN ISG+D I GS Q ++ A G + YPGDI S +PAP + EE + DA ++D+GLEAGVNF+ + SEPEIDV+ETN+SAG +GLG C +V++V + NL DG TYFSVHRE T I +EL+EE EVNG+AIGFFMK A ERIQ FD+SV DWKT+ISRKES G DVQTF F++RKALYVRLETHG +FNNW+AFTE+EVC+KSA E NALFGG+EA + EEL LAGEVC APTKL P KAS SD+VRVLFDGN+ET W+T NTQ ESDL+ND V +TF GD RVS L I+FFDGHLAHQ+F VYVQSA Y+WTPVML EQAA + +QTF I+LDGV+K+Y+VG GN VG +SK SE++V GC
Sbjct: 3 SETITITAGDDFEASCLKVVEPGDTCHLEKGDYVHDGLTVTHGTEDKRITITGDPDACIKGSNTQDRVMQIAHDYYTIEGICFDGHHGDENVATAIYVLGADRKSTKNGETSSVTGLEMFDLEIKNFSSECVHFRYFVTHAEVSGCTIQ---------------------------VKDGKAPEPKLRTGSADNVDADVCGYNWIHHNTFRTYGNECVDIKEGSANNLVEHNVCEQQVDPNSGCFGSRGSDNTFRWNEIAECKGAGIRVGGEDGYGEGNHMYGNTIKNAEKGAFNVMSPNQGTVCENSISGIDLIVYGSSRQYALHNRNLLLLSPSTLLTLPMPLVCSRSVLRTTRSSSARRWLPGSAQGRWLAPVAYPGDIGTGSSAPAP-APEEGDEVDAPLDDNGLEAGVNFTNDAKDSEPEIDVIETNESAGLTGLGSCSTVVEVKQA---------------NLLDGTTETYFSVHREGTAITLELQEETEVNGVAIGFFMKAAEAERIQVFDISVMEEGGDDWKTVISRKESSGAMGDVQTFSFSSRKALYVRLETHGKKKKNFNNWTAFTEVEVCAKSA-ETNALFGGIEA-IREELGMLAGEVCSAPTKLVPTGAKASRSDDVRVLFDGNYETWWSTINTQSESDLSNDMVQLTFAGDTRVSFLNIAFFDGHLAHQYFFVYVQSAHAYTWTPVMLNEQAATQVGMQTFSIDLDGVHKIYVVGKGNDVGAYSKLSEVEVYGC 706
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: D7FKG0_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG0_ECTSI) HSP 1 Score: 728 bits (1878), Expect = 7.610e-248 Identity = 398/764 (52.09%), Postives = 504/764 (65.97%), Query Frame = 2
Query: 224 ASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQH--DDEYVATAIYVLGADK--KSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQDQDQFTEDGATGDC--SSYPGDIDNASPSPAPDSEEES--------------------------------------AKEDALVEDDG----LEAGVNFSEG---SIGSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPDKADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQDV-QTFPFNARKALYVRLETHGNSFNNWSAFTEIEVCSKSAGEGNALFGGLEAALGEELETLAGE-VCIAPTKLAPVNVK---ASGSDNVRVLFDGNFETRWATTNTQHESDLNNDKVTVTFGGDVRVSSLLISFFDGHLAHQFFSVYVQSARDYSWTPVMLKEQAAREESLQTFDINLDGVNKLYIVGNGNVVGDFSKFSEIQVLGC 2347
A+A T +I GDD+E +CLK+V+PGDTCY GD+ DG+T HGT+ RIT+TGDS AC+KGSNTQDR+ QIAHDYYT++ ICFDG H DDEYV++AIY+LGADK K NG +SVTG Q+FDLEIKNF EC+HFRYFVT EV+GCTVQHCG +FE G G KVGEGIY+GTALDQV D K PEPK+R+ SADN++ADV +NWIHHNTFRTYGNECV++KEGS NL+E+N+CEQQ D NSGCFG+RGS NTFRWN+++ CVGAGFR GGD ++G N+ YGN I +A GA++VMA QG +C+NK S +D+ G ++ F + A DC S PGDI+N S S PD ++ AK DD L AGVN G + E +I + TN AG SG GECG V + K V+H D D ST NLFDGD+ TYFS++REST +IMELE E EV+GI+I FFMK+ +E+R+QTF VSVRAA+D+++ T+IS + S G +DV Q F F Y++L T+GN+FNNWSAF E EVC + E NALF G+ AA ++L L G+ VC+ P KLA N +S S+NVR +FD NF T WA+ NTQ+E+ + N K+ + F GD VS + I+FFDGHLA +Y ++A + WT V+ + + QTF I GVN LYIVG GN VG+ K SE++V GC
Sbjct: 8 ATATTYEISPGDDYEETCLKMVQPGDTCYFLSGDHKFDGMTQVHGTEKNRITLTGDSDACLKGSNTQDRLFQIAHDYYTVKDICFDGYHEDDDEYVSSAIYILGADKARKKDSNGEKASVTGTQLFDLEIKNFDEECIHFRYFVTQTEVSGCTVQHCGKHSFEEGGGGKVGEGIYIGTALDQVDDNKTPEPKLRTVSADNIDADVTKHNWIHHNTFRTYGNECVDIKEGSRENLVEYNICEQQHDANSGCFGSRGSANTFRWNKISHCVGAGFRFGGDADYGVDNNAYGNEINDAAYGAYNVMAYPQGQICKNKHSDIDYAFVGDYKKN---FDSEAAIADCPDGSTPGDIENFSSSELPDDWDDQVVGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTVRGFADDTEVGILCAGVNCLPGVRAATAEEEKIFEIGTNSMAGTSGEGECGVVASIGKVKVEHVDNIDPSTSPSNLFDGDIDTYFSINRESTSMIMELEVEQEVDGISISFFMKDPSEDRVQTFSVSVRAADDTEYTTVISDRTSSGEKDVHQHFTFTGTTTKYIKLTTNGNTFNNWSAFNEFEVCGEEV-ESNALFSGIRAAK-KKLAQLEGDSVCVEPVKLAVQNAHVTDSSDSNNVRSIFDLNFHTWWASANTQNENPMENAKIRLHFQGDQNVSYVKIAFFDGHLASYHMDLYKRAAANKEWTSVLTGQVVEAVSTFQTFTIEETGVNVLYIVGLGNDVGNKFKVSEVEVYGC 766
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: D7FZ38_ECTSI (Secreted protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ38_ECTSI) HSP 1 Score: 630 bits (1624), Expect = 1.160e-213 Identity = 337/559 (60.29%), Postives = 406/559 (72.63%), Query Frame = 2
Query: 674 QHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQDQDQFTEDGATGDCSSYPGDIDNASPSPAPDSEEESAKEDALVEDDGLEAGVNFSEGSIGSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPDKADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQD-VQTFPFNARKALYVRLETHGNSFNNWSAFTEIEVCSKSAGEGNALFGGLEAALGEELETLAGEVCIAPTKLAPVNVKASGSDNVRVLFDGNFETRWATTNTQHESDLNNDKVTVTFGGDVRVSSLLISFFDGHLAHQFFSVYVQSARDYSWTPVMLKEQAAREESLQTFDINLDGVNKLYIVGNGNVVGDFSKFSEIQVLGC 2347
QHCGID E G+G KVGE IYVGTAL Q APEPK+R+GSADNV+ADVC YNWIHHN FRTYGNECV++KEGSANNL+E+NVCEQQ D NSGC G+RGSDNTFRWNE+AEC GAG RVGG++ +G GNH++G IKNA+ GAF+VM+PNQGTVCE ISGVD I DQ+QF+E ATG+CSS PGDI S +PAP + EES + D L++D GLEAG+ F++ + SEPEIDV+ET +SAG +GLG C +V++V + SV H + ADS+T EEE EVNG+AIGFFMK A EERIQ FD+S+ DWKT+ISRKES G VQTF F S+ T + C+ S + NALFGG++A +GEEL TLAGEVC APTKL P KASG+D+VRVLFDGN+ETRW+T NTQ ESDL+ND V +TF GD+RVSSL I+FFDGHLAHQ+FSVY+QSA Y+WTPVML EQAA + S+QTF I+LDGV+K+YIVG GN VG +SKFSE++V GC
Sbjct: 4 QHCGIDTSENGEGGKVGEAIYVGTALSQ-----APEPKLRTGSADNVDADVCGYNWIHHNAFRTYGNECVDIKEGSANNLVENNVCEQQFDPNSGCVGSRGSDNTFRWNEIAECKGAGIRVGGEDGYGEGNHMHGKTIKNAEKGAFNVMSPNQGTVCETSISGVDLID------DQEQFSEAVATGECSSDPGDIGTGSSAPAP-ALEESDEVDTLLDDSGLEAGIKFTDDAKDSEPEIDVIETTESAGLTGLGSCSTVVEVKQASVLHAEYADSTT---------------------------EEETEVNGVAIGFFMKAAEEERIQVFDISIMEEGGDDWKTVISRKESNGAMGGVQTFSF--------------------SSLTTLSKCAPSRQKKNALFGGIQA-IGEELGTLAGEVCSAPTKLVPAGAKASGTDDVRVLFDGNYETRWSTINTQSESDLSNDIVQLTFTGDMRVSSLNIAFFDGHLAHQYFSVYIQSAHAYTWTPVMLNEQAATQVSMQTFSIDLDGVHKIYIVGKGNDVGAYSKFSEVEVYGC 502
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A4V1ZJ12_9BACT (DUF1565 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A4V1ZJ12_9BACT) HSP 1 Score: 223 bits (567), Expect = 1.140e-60 Identity = 124/298 (41.61%), Postives = 167/298 (56.04%), Query Frame = 2
Query: 278 LKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDY-----YTIEGICFDGQHDDEYVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDN-EHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENK 1153
L + E GD LA G+Y T+ GTKDK+ITITG A + G+ + R+ +I HDY +TI G+ D + Y +YV+G++KK V GL + ++ ++N EC+ RYF EV T++HCG+ F GSK GEGIY+GTA +Q DGK P I D N +HHN TYGNECV++KEG++NNLIE+N C+ Q D +SG F ARG+DN FR+N GAG R+GGD G N +YGN I+N GA + Q +C+NK
Sbjct: 88 LSLAEAGDEIRLADGEYRQTFSTLKSGTKDKQITITGSRNAVVLGTTKESRIAEIRHDYIRLIGFTINGLDGDVAVKESYRDKLLYVIGSEKKD-------GVDGLVIDNMLLENAGGECLRLRYFARDNEVKYSTIRHCGVHDFRFKGGSKNGEGIYIGTAPEQRDDGKNPTNDI----------DASRNNHVHHNVIETYGNECVDVKEGASNNLIEYNTCQFQMDHDSGGFDARGNDNIFRYNISKNNKGAGIRLGGDTMSDGINNQVYGNTIENNGMGAVKTVRTPQAKLCDNK 368
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A2W4MJI7_9CHLR (DUF1565 domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4MJI7_9CHLR) HSP 1 Score: 219 bits (559), Expect = 1.360e-59 Identity = 123/320 (38.44%), Postives = 173/320 (54.06%), Query Frame = 2
Query: 221 AASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHD-----DEYVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEH-GRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISG 1162
+A KTIQ +++ +PGD LA G+Y D ++ +GT ITITG + A +KG + R+ QI+HDY T+ G DG H D Y ++ +G ++++ VTG+++ ++ KN ECV RYF E+ T +CG+ F G K GE IY+GTA +Q++DGK P + D N NWIHHNTF T GNECV++KE S N++E+N C QKD + FG+RGS N FR+N VGAG R+GGD + G N +YGN I++ G V Q +C N +SG
Sbjct: 28 SAPFKTIQ---------QAIRLAQPGDVINLAPGEYYQDVVSERNGTPTAPITITGPADAVVKGGG-KARIFQISHDYLTLSGFTIDGLHGNPNSPDGYRDKLLFAIGTERRA-------GVTGMRILNMTFKNAGGECVRLRYFAQQNEIAHSTFLNCGVHDFRFNGGGKNGEAIYIGTAPEQLRDGKNP-----TADPDQSNG-----NWIHHNTFNTQGNECVDIKEASTGNIVEYNTCTGQKDPEAAGFGSRGSGNVFRYNTSYGNVGAGVRLGGDTSNEGINNDVYGNTIRDNRGGGIKVQRSPQRMICGNIMSG 320
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT) HSP 1 Score: 219 bits (557), Expect = 2.610e-59 Identity = 130/319 (40.75%), Postives = 175/319 (54.86%), Query Frame = 2
Query: 224 ASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDDE-----YVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDNEH-GRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISG 1162
+S K I++ + + + + +PG+T L G Y D ++ GT +K ITITG +KG + RV++I HD+ + DG H D Y IYVLG KS + GVT GL++ + IKN ECV RYF + E+ ++ CGI FE G K GEGIY+GTA +Q+KDGK P I D N IHHNT T GNECV++KEGS+ N++E+N C QKDK S +RGS N FR+NEV +GAG R+GGD ++ G N +Y N IKN +G QG +C NK+ G
Sbjct: 72 SSGKVIEVSPVESIQKA-IDNAQPGETIKLLPGVYNQDFVSKRSGTAEKPITITGSKDVVVKGGG-KARVIEINHDHIILSKFTVDGLHGDSGRVEGYRDKLIYVLG---KSARKGVT----GLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDI----------DESNNNLIHHNTINTQGNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNIFRYNEVYGNLGAGVRLGGDEDNDGINNDVYENTIKNNVSGGIKFQRAPQGKICGNKMEG 371
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT) HSP 1 Score: 214 bits (545), Expect = 1.040e-58 Identity = 121/297 (40.74%), Postives = 164/297 (55.22%), Query Frame = 2
Query: 290 EPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDD-----EYVATAIYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGD-NEHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISG 1162
+PGDT L G Y D +T GT + ITI+G A +KG + R+ +I HD+ ++ G DGQ+ + Y IY LG +++ VTGL++ + IKN EC+ RYF E+ T+ CG+ F G K GEG+Y+GTA +Q+KDGK P K R S +N+ IHHNT T GNECV++KEGS N++E+N C QKDK SG +RG+ N FR+NEV GAG R+GGD N G N +Y N I+N +G QG +C NK+ G
Sbjct: 9 QPGDTINLLPGVYFQDVVTKRSGTPENPITISGTKDAVVKGGG-KARIFEINHDFISLSGFTIDGQYGELDNKNGYRDKLIYALGKEERK-------GVTGLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGVYIGTAPEQLKDGKNPT-KDRDESNNNL---------IHHNTINTLGNECVDIKEGSWGNIVEYNNCTGQKDKESGGMDSRGNRNIFRFNEVYGNSGAGVRLGGDENSDGINNDVYENTIRNNASGGIKFQRSPQGKICGNKMEG 287
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT) HSP 1 Score: 222 bits (566), Expect = 1.330e-58 Identity = 174/541 (32.16%), Postives = 265/541 (48.98%), Query Frame = 2
Query: 278 LKVVEPGDTCYLAKGDYLHDGLTVTHGTKDKRITITGDSGACIKGSNTQDRVLQIAHDYYTIEGICFDGQHDDEYVATA-----IYVLGADKKSTKNGVTSSVTGLQMFDLEIKNFASECVHFRYFVTHAEVTGCTVQHCGIDAFELGKGSKVGEGIYVGTALDQVKDGKAPEPKIRSGSADNVNADVCAYNWIHHNTFRTYGNECVEMKEGSANNLIEHNVCEQQKDKNSGCFGARGSDNTFRWNEVAECVGAGFRVGGDN----EHGRGNHIYGNVIKNADNGAFSVMAPNQGTVCENKISGVDFISTGSDDQDQDQFTEDGATGDCSSYPGDIDNASPSPAPDSEEESAKEDALVE--DDGLEAGVNFSEGSI-------GSEPEIDVVETNDSAGGSGLGECGSVLKVSKTSVQHPD-KADSSTDVDNLFDGDVSTYFSVHRESTYIIMELEEEAEVNGIAIGFFMKNANEERIQTFDVSVRAAEDSDWKTLISRKESKGTQDVQTFPFNARKALYVRLETHGNSFNNWSAFTEIEV 1843
+ + +PG T YL G Y D ++ +G+ I+I G A IKG+ RV++I HD I G DG + D A+ IY +G K +KNGVT GL++ D+ IKN EC+ +YF + E+ +Q+CGI F+ G K GEGIY+GTA +Q+ + P + ++N N+IH+N+ +T GNE V++KEGS N++E+N+ QKD SG +RG N FR+N+VAE +GAG R GGDN ++G+ N YGN I N GAF + A QG +C N +SG + +TG D + FT D S D + P D+ + +V+ D V+ +G+I S P++ + ++ V K+S SVQ A+ N D ++ T +S +I +L E + + I F+ + R Q F V V ++ +DW + T Q F F A YVR++ GN+ N W++ TE+++
Sbjct: 74 VNLAQPGQTIYLLPGQYFQDIVSARNGSLQSPISILGRQDAIIKGAGAS-RVIEINHDNIIISGFTLDGLYGDASKASGYRDMLIYAVG---KESKNGVT----GLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQL----SKNPTLDIDKSNN--------NYIHNNSIQTNGNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNIFRYNDVAESLGAGIRFGGDNYKGVQYGKNNIAYGNKITNNKFGAFKIQATPQGNICGNILSG-NGSATG-DYGSKINFT---IACDASILKYDANLVGPKQIVDT-----TQPVVVDPIDTTTTTTVSTGQGTIDGKTEYYSSNPDVSYLVCSEK-------NIEVVPKLSINSVQASSFDANEGCVPQNALDDNLDTRWSASGLGEWIEFKLAEVKNIAFLKIAFYKGDL---RQQKFYVEV-SSNRTDWTKAYIGESRGDTTGFQKFDFTDTLAKYVRIKGDGNTTNPWNSITEVQI 573 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1023.356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1023.356.1 >prot_S-firma_F_contig1023.356.1 ID=prot_S-firma_F_contig1023.356.1|Name=mRNA_S-firma_F_contig1023.356.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=724bp MRSSSVLGLALLFTAASAKTIQIEAGDDFEASCLKVVEPGDTCYLAKGDYback to top mRNA from alignment at S-firma_F_contig1023:16834..22296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1023.356.1 ID=mRNA_S-firma_F_contig1023.356.1|Name=mRNA_S-firma_F_contig1023.356.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5463bp|location=Sequence derived from alignment at S-firma_F_contig1023:16834..22296+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1023:16834..22296+ >mRNA_S-firma_F_contig1023.356.1 ID=mRNA_S-firma_F_contig1023.356.1|Name=mRNA_S-firma_F_contig1023.356.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4344bp|location=Sequence derived from alignment at S-firma_F_contig1023:16834..22296+ (Sphaerotrichia firma ET2_F female)back to top |