mRNA_S-firma_F_contig10225.350.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A437MCZ6_9PROT (DUF938 domain-containing protein n=1 Tax=Rhodovarius crocodyli TaxID=1979269 RepID=A0A437MCZ6_9PROT) HSP 1 Score: 148 bits (373), Expect = 1.680e-41 Identity = 98/202 (48.51%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAA-VDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
APAA RNR + E L G L T + E+ASG+G HA A FP +T Q +D EA A I + AE +VLP LDV WPA VL +NMIHI+P E T L+AGA +L PG L LYGP+ +G G ESNH F+ WL+ARDPRFG+R LEDVA +AA VG VT MPANN VFR+
Sbjct: 8 APAAARNRDPITEVLR--GILPAQGTVL-EIASGSGEHAVHFARAFPGLTFQPSDPEAGARASIDAWAEDVPNVLPALELDVLGP---------WPALRAQAVLCINMIHIAPWEATPALMAGAAAVLEPGGLLYLYGPYRVG--GEMVESNHKFEAWLQARDPRFGVRALEDVAAEAARVGFGPPGVTEMPANNLSVVFRR 195
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A0Q8XLB0_9SPHN (SAM-dependent methyltransferase n=1 Tax=Sphingomonas sp. Root241 TaxID=1736501 RepID=A0A0Q8XLB0_9SPHN) HSP 1 Score: 145 bits (365), Expect = 2.690e-40 Identity = 91/205 (44.39%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 4 APAALRNRQ----VVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
APA LRNR+ V+ E L G + EVASG+G HA A+ FP++T Q +D + + A I G +V PP LD A AWP+ A D +L +NM+HISP E T GL+AGA RLL PGA L+LYGP+ ESN FD LK+R+P +G+R++EDV+ AA GL L + MPANN VFR+
Sbjct: 7 APATLRNREPIAAVLAETLPARGLVL-------EVASGSGEHAAFFAERFPDLTWQPSDPDTDALASIADWCAGLANVPPPLALDAAEA--AWPA-----TAADAILCVNMVHISPWEATLGLMAGAGRLLTPGAPLILYGPYRQRDVPT-AESNEAFDVSLKSRNPAWGLRHVEDVSAAAAACGLLLERIVAMPANNLSLVFRR 196
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A4Q5S407_9SPHN (DUF938 domain-containing protein n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q5S407_9SPHN) HSP 1 Score: 144 bits (364), Expect = 3.920e-40 Identity = 87/203 (42.86%), Postives = 117/203 (57.64%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTK--MYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPA-AVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFR 603
APA +RNR+ + E L G L P + + E+ASG+G H A+ FP + Q +D + + A I EG G+V PP +LD + DWP A D +L +NM+HISP T GL+AGA RLL PGA L+LYGP+ P SN F+ WLK + P +G+R +EDV +AA GL L + PMPANN + V+R
Sbjct: 5 APATVRNREPIAEVLA--GIL---PARGLVLEIASGSGEHCAYFAERFPALEWQPSDPDPDALASIAEWTEGLGNVRPPVMLDAAA---------DWPVDAADAILCVNMVHISPWAATLGLMAGAGRLLGPGAPLILYGPYRQHGVETAP-SNEQFELWLKGKSPEYGLRFVEDVTHEAAAQGLTLERIVPMPANNLILVYR 192
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A7W6NVW5_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas kyeonggiensis TaxID=1268553 RepID=A0A7W6NVW5_9SPHN) HSP 1 Score: 144 bits (362), Expect = 6.580e-40 Identity = 90/205 (43.90%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 4 APAALRNRQ----VVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
APA RNR V+ E+L G + E+ASGTG H A FP +T Q +D + + A I + +EGR ++LPP +D ++ D+PAA D +L +NM+HISP E T GLLAGA LAPGA L+LYGP+ P SN F+ WLK RDPRFG+R +E V AA GL L + MPANN + V+R+
Sbjct: 5 APATERNRDPIAAVLAEELPAQG-------TVLEIASGTGEHVAFFAGRFPALTWQPSDPDGDALASIAAWSEGRANILPPLEIDASAG--------DFPAA-DAILCVNMVHISPWEATLGLLAGAGEALAPGAPLILYGPYRREGVETAP-SNEQFELWLKERDPRFGLRFVEAVTEAAAAQGLSLERLVEMPANNLMLVYRR 192
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: UPI0013567CD6 (DUF938 domain-containing protein n=1 Tax=Rhodovarius lipocyclicus TaxID=268410 RepID=UPI0013567CD6) HSP 1 Score: 143 bits (360), Expect = 1.440e-39 Identity = 93/204 (45.59%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTK--MYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAA-VDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
APAA RNR + E L + P + + E+ASG+G HA A FP +T Q +D +A A I + AEG ++ P LDV + WPA VL +NMIHI+P E T L+AGA L PG L LYGPF +G G ESNH F+ WL+ARDPRFG+R LEDVA +AA G +VT MPANN +FR+
Sbjct: 8 APAAARNRDPITEVLRAI-----LPAQGLVLEIASGSGEHARHFAAKFPGLTFQPSDPDAGARASIDAWAEGIPNIRPALELDVLAP---------WPALRAQAVLCINMIHIAPWEATPALMAGAAACLEPGGLLYLYGPFRVG--GAMVESNHQFEAWLQARDPRFGVRALEDVAAEAARAGFGPPAVTDMPANNLSVLFRR 195
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: UPI001931E0CE (DUF938 domain-containing protein n=1 Tax=Roseomonas ponticola TaxID=2786951 RepID=UPI001931E0CE) HSP 1 Score: 142 bits (358), Expect = 3.050e-39 Identity = 91/205 (44.39%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 1 FAPAALRNRQVVVEQLTKLGFLAHTPTK--MYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWP-AAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
+APA LRNR ++ QL +L P + + EVASGTG H A P + Q TD + A I + G ++ PP LD ++ DWP AA D +L +NMIHI+P T GLL GA R+L PGA L+LYGP+ A P SN FD+ L+ARDP +G+R+LE+VA AA G VTPMPANN + VFR+
Sbjct: 8 YAPATLRNRDPILAQLRRL-----LPPRGLVLEVASGTGEHCAHFAAALPALDWQPTDPDPGNRASIAAWCGGFANIRPPLALDASA---------DWPIAAADALLCINMIHIAPWTATKGLLRGAARVLPPGAPLILYGPYRQAAVPTAP-SNEEFDQSLRARDPAWGLRHLEEVAALAATRGFAPPEVTPMPANNLIVVFRR 197
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: K9GQC2_9PROT (SAM-dependent methyltransferase n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9GQC2_9PROT) HSP 1 Score: 141 bits (355), Expect = 5.110e-39 Identity = 85/175 (48.57%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 91 EVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRG--SVLPPTVLDVTSAPDAWPSPPDWPA-AVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
E+ASGTG HA + P +T Q TD++A A + + AE G ++ P LDVT+ P WP A D V+ +NMIHISPPE T LL GA +L GA LVLYGPF +G ESN FD WLKA++P FGIRNL+DVA AAG G MPANN VFR+
Sbjct: 14 EIASGTGEHAVFFSRALPGLTWQPTDVDASARASVDAWAEAEGPETLRPAVALDVTARP--------WPVDAADAVVCINMIHISPPECTPALLQGAAVVLPRGAPLVLYGPFRVGGVHT-SESNAAFDNWLKAQNPSFGIRNLDDVADMAAGAGFSTPETVEMPANNLTVVFRR 179
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A2W5DZW4_9SPHN (SAM-dependent methyltransferase n=1 Tax=Sphingomonas hengshuiensis TaxID=1609977 RepID=A0A2W5DZW4_9SPHN) HSP 1 Score: 140 bits (354), Expect = 1.620e-38 Identity = 91/202 (45.05%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRKV 609
APA LRNR + E L + + EVASG+G HA A FP + Q +D +A A I + + G +V P +LD +A D WP A D VL +NM+HI+P E T GL+AGA RLLA GA L+LYGP+ G ESN FD LK+RDPR+G+R +E+V AA G LAS+ MPANN L +R+V
Sbjct: 20 APATLRNRGAIAEALRAI---LPPAGLVLEVASGSGEHAAYFAAEFPTIEWQPSDPDATALASIAAWSAGLANVRSPLMLD--AAADRWPV-----AVADVVLCINMVHIAPWEATLGLIAGARRLLAVGAPLILYGPYRRGGVPT-AESNEAFDASLKSRDPRWGLRMVEEVT--AAATGFALASLVEMPANNLLLAYRRV 208
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A0E9MUE4_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas changbaiensis NBRC 104936 TaxID=1219043 RepID=A0A0E9MUE4_9SPHN) HSP 1 Score: 140 bits (352), Expect = 2.510e-38 Identity = 88/203 (43.35%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWP-AAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRKV 609
APA RNR+ + L L T + E+ASGTG H A+ FP++ Q +D + + + I + +EG ++ PP LD PDWP AA D +L +NM+HISP T GL AGA RLL PGA L LYGP+ A P SN FDE LKARDP +G+R L+DV A VGL + MPANN +FR++
Sbjct: 9 APATARNREPI---LAVLRDSLPTSGLILEIASGTGEHVRFFAESFPQLEWQPSDPDPDALSSIAAWSEGVPNIRPPLQLDARD--------PDWPIAAADAMLCINMVHISPWAATEGLFAGAARLLPPGAPLYLYGPYRRTAMPTAP-SNEAFDESLKARDPAWGLRQLDDVIALAERVGLRFERLVEMPANNLSVIFRRL 199
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Match: A0A257VNM8_9PROT (SAM-dependent methyltransferase n=1 Tax=Rhodospirillales bacterium 12-71-4 TaxID=1970563 RepID=A0A257VNM8_9PROT) HSP 1 Score: 140 bits (352), Expect = 2.510e-38 Identity = 91/201 (45.27%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 4 APAALRNRQVVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVTIQCTDLEAEMCAVITSAAEGRGSVLPPTVLDVTSAPDAWPSPPDWPAAVDFVLNMNMIHISPPETTGGLLAGAHRLLAPGAALVLYGPFVMGAAGLFPESNHGFDEWLKARDPRFGIRNLEDVAGKAAGVGLHLASVTPMPANNWLAVFRK 606
APAA RNR+ + L L L + EVASGTG H A P + Q +D +AE A I + GR ++ P LD +A AWP AA VL +NMIHI+P T GLL GA RLL PGA L+LYGP++ P SN FD L+AR+P +G+R LE VA AA G +VTPMPANN L FR+
Sbjct: 9 APAAGRNREPI---LAALRDLLPPSGLVLEVASGTGEHCAHFAAALPALVFQPSDPDAEARASIDAWCAGRSNIRPALALD--AAAGAWPL-----AAAAAVLCINMIHIAPWSATPGLLRGAARLLPPGAPLILYGPYIQDGVATAP-SNLDFDASLRARNPAWGLRRLEQVADAAAAAGFGAPAVTPMPANNLLVAFRR 198 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10225.350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10225.350.1 >prot_S-firma_F_contig10225.350.1 ID=prot_S-firma_F_contig10225.350.1|Name=mRNA_S-firma_F_contig10225.350.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=203bp FAPAALRNRQVVVEQLTKLGFLAHTPTKMYEVASGTGAHACLIADLFPEVback to top mRNA from alignment at S-firma_F_contig10225:4373..4981- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10225.350.1 ID=mRNA_S-firma_F_contig10225.350.1|Name=mRNA_S-firma_F_contig10225.350.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=609bp|location=Sequence derived from alignment at S-firma_F_contig10225:4373..4981- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10225:4373..4981- >mRNA_S-firma_F_contig10225.350.1 ID=mRNA_S-firma_F_contig10225.350.1|Name=mRNA_S-firma_F_contig10225.350.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1218bp|location=Sequence derived from alignment at S-firma_F_contig10225:4373..4981- (Sphaerotrichia firma ET2_F female)back to top |